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Author	SHA1	Message	Date
mzwiessele	2de4b92c38	[parameter core] offset for can be done without parameter slices	2014-08-07 10:52:00 -07:00
mzwiessele	6fc982faa0	[gradcheck] some performance enhancement	2014-08-07 10:52:00 -07:00
mzwiessele	8273fd9e2a	[bgplvm] gradient settings	2014-08-07 10:52:00 -07:00
Zhenwen Dai	98d91e6db2	Merge branch 'hmc' into devel ... A HMC sampler for GP parameters	2014-08-07 14:30:03 +01:00
Zhenwen Dai	c3bb7b28a1	debug HMC shortcut	2014-08-07 14:28:46 +01:00
Zhenwen Dai	e0a7884270	hmc shortcut	2014-08-06 22:15:28 +01:00
Zhenwen Dai	d11a2c482c	correct the initial distribution of p	2014-08-06 16:33:35 +01:00
Ricardo	140fdc8211	Merge branch 'devel' of github.com:SheffieldML/GPy into devel	2014-08-06 14:45:20 +01:00
Ricardo	128e894560	coregionalized 2D plotting fixed	2014-08-06 14:44:56 +01:00
Zhenwen Dai	23120c53e2	remove prints	2014-08-06 11:10:34 +01:00
Zhenwen Dai	0a1e7aface	debug hmc code	2014-08-06 11:01:08 +01:00
Zhenwen Dai	18a1513edb	add hmc.py	2014-08-05 16:48:35 +01:00
mzwiessele	93b92111f8	[minor] minor changes	2014-08-05 08:28:03 -07:00
Niu	e17e539bce	initial implementation of hmc	2014-08-02 14:06:24 +01:00
Alan Saul	ece85f02fe	returned setup.py read to old version	2014-07-29 22:51:11 +01:00
Alan Saul	577dd5a62a	Merge branch 'devel' of https://github.com/SheffieldML/GPy into devel	2014-07-29 15:36:52 +01:00
Alan Saul	ddcaf8f8b5	Added forced extraction of eggs (as we have a fair few non-py files and use the directory structure) added some files to MANIFEST and setup.py's package_data so its included upon distributing	2014-07-29 12:02:47 +01:00
Neil Lawrence	1c9eb270bf	Merge branch 'devel' of https://github.com/SheffieldML/GPy into devel	2014-07-24 20:55:23 +01:00
Neil Lawrence	ec5e9443ce	Changes to datasets.py	2014-07-24 20:55:18 +01:00
mzwiessele	8c80fb9c52	[inference] less constant jitter, and jitter adjustements ... Conflicts: GPy/util/linalg.py	2014-07-22 09:26:20 -07:00
James Hensman	51e48f7508	fixed a bug in optimize restarts: it now used optimizer_array	2014-07-16 09:40:44 +01:00
Ricardo	369cc0ba2b	Merge branch 'devel' of github.com:SheffieldML/GPy into devel	2014-07-11 10:43:02 +01:00
maxz	08555c5f56	[vardtc missing] logging ... Conflicts: GPy/inference/latent_function_inference/var_dtc.py	2014-07-08 15:42:13 -07:00
mzwiessele	c66f50262e	[init] normalization bugfix	2014-07-07 16:01:17 -07:00
mzwiessele	7c8de7fff8	[whitespaces]	2014-07-07 16:01:12 -07:00
mzwiessele	8dacea2c13	[var dtc missing]	2014-07-02 12:30:33 -07:00
mzwiessele	c8da45aa8f	[var dtc missing] performance increase with right iterations	2014-07-02 12:07:40 -07:00
mzwiessele	d592f680f3	logging	2014-07-02 11:15:36 -07:00
mzwiessele	4a8a9bac54	[var dtc missing] no caching of indexed y anymore, no subarray indexing	2014-07-02 11:05:11 -07:00
mzwiessele	a9443417d7	[logging] more on logging	2014-07-02 10:15:18 -07:00
mzwiessele	eb9fb180fb	var dtc missing] memory efficiency greatly improved	2014-07-02 09:17:27 -07:00
mzwiessele	89f7f2dc73	[parameterized] init greatly improved	2014-07-02 09:17:14 -07:00
mzwiessele	8a8818aa91	yak shaving and whitespaces	2014-06-30 10:26:17 -07:00
mzwiessele	b9e61b0ed1	[brendan] netpbmfile	2014-06-30 10:26:05 -07:00
mzwiessele	431f67a8e3	[optimize] bugfix	2014-06-30 09:24:26 -07:00
mzwiessele	8ef16f5529	[parameterized] bugfix: downstream parameters did not get constraint update on add_parameter	2014-06-30 09:20:56 -07:00
mzwiessele	cbcb0a9b99	[parameterized] adding parameters in hierarchy, did not update higher siblings	2014-06-30 08:18:05 -07:00
mzwiessele	67620e47d0	[cacher] removed logger	2014-06-30 08:17:47 -07:00
mzwiessele	3ac8f477fa	[var dtc missing] yak shaving	2014-06-27 16:22:57 -07:00
mzwiessele	35b778b45f	[logging]	2014-06-27 16:19:23 -07:00
mzwiessele	8213b5011c	[gp] memory > only one copy	2014-06-27 15:21:12 -07:00
mzwiessele	06ee090a50	[subbarray] logging	2014-06-27 15:21:12 -07:00
mzwiessele	83e2df838d	[vardtc missing] performance fixes	2014-06-27 08:04:20 -07:00
mzwiessele	66390cbf8a	[optimizer array] bugfix, when updating the model the optimizer array would not update	2014-06-25 09:33:17 -07:00
mzwiessele	94bff66c7b	[optmimize] bugfix	2014-06-20 12:10:21 -07:00
mzwiessele	73d9118043	[whitespaces] & [opt] minor fix of optimizer, when Optimizer is provided (set model to self)	2014-06-20 10:28:32 -07:00
mzwiessele	eaa18e3512	[model] optimizer can now be an optimizer instance, instead of a string	2014-06-19 12:07:58 -07:00
mzwiessele	1e006f63b5	[parallel vardtc] minor adjustments to work with current implementation of ... psi stats	2014-06-18 08:56:48 -07:00
mzwiessele	c62dd85418	[randomize] adjusted parameters to go into random generator right	2014-06-18 08:52:33 -07:00
mzwiessele	47d10600d1	[scg] minor adjustements based on original publication	2014-06-18 08:52:27 -07:00