Commit graph

3491 commits

Author SHA1 Message Date
James Hensman
f1da8c0fec Merge branch 'devel' of github.com:/sheffieldml/GPy into devel 2015-02-25 16:10:38 +00:00
Zhenwen Dai
11cc5d16f4 add save param_array 2015-02-23 16:19:14 +00:00
javiergonzalezh
b49228d1d0 minor error in corregionalization corrected 2015-02-23 15:02:50 +00:00
mzwiessele
6435b83c7a [sparse gp] prediction with uncertain inputs 2015-02-21 14:43:10 +01:00
Zhenwen Dai
9f7ae611ed force set_XY to update the model 2015-02-17 10:49:06 +00:00
James Hensman
7920ff0b4d Merge branch 'devel' of github.com:/sheffieldml/GPy into devel 2015-02-11 11:49:59 +00:00
James Hensman
482bd1472c reconfigured svgp inference a little 2015-02-11 11:49:45 +00:00
James Hensman
393b9e94ba added more stable expectations for Bernoulli 2015-02-10 16:15:37 +00:00
James Hensman
06d7e690f3 minor weave/numpy bug in coregionalize 2015-02-10 15:54:59 +00:00
James Hensman
475eceb4dd Merge branch 'devel' of github.com:sheffieldml/GPy into devel 2015-02-10 14:23:11 +00:00
James Hensman
b499a870fb fixed a plotting bug for sliced plots 2015-02-10 14:23:03 +00:00
Alan Saul
f690192384 Added logging for jitter so we know how much has been added and how many tries have been taken 2015-02-10 11:52:40 +00:00
Alan Saul
cfdd72fc72 Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2015-02-09 19:36:08 +00:00
Alan Saul
29d153e185 Bug in linalg jitchol!!! 2015-02-09 19:35:46 +00:00
Max Zwiessele
e967c95ef0 Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2015-01-30 09:43:06 +00:00
Max Zwiessele
167e9c538d [var dtc] added code for additional covariates, not affecting normal procedures 2015-01-30 09:43:02 +00:00
Neil Lawrence
47cbdc265e Update __init__.py
Add inference to __init__.py
2015-01-21 08:15:52 +01:00
Neil Lawrence
8288240b7d Update hmc.py 2015-01-21 08:14:35 +01:00
Cristian Guarnizo
81c57140c4 Update __init__.py
Added EQ_ODE2.
2015-01-19 11:28:27 -05:00
Cristian Guarnizo
88f69312eb Create eq_ode2.py
Added ODE2 kernel for latent force models.
2015-01-19 11:27:07 -05:00
Max Zwiessele
57e941140c [opt] unified printing of status of optimization 2015-01-15 09:02:45 +00:00
Max Zwiessele
4deac0103c [transformations] bugfix for pickling 2015-01-15 09:02:22 +00:00
Max Zwiessele
7fbbdafdbf [opt] bugfix 2015-01-13 15:07:24 +00:00
Max Zwiessele
be3c8f5202 [verbose opt] messages would be overwritten when using ipython_notebooks, fixed 2015-01-13 14:29:28 +00:00
Max Zwiessele
07e85042ec [kern] added Fixed kern to import list in GPY.kern 2015-01-13 14:05:50 +00:00
Max Zwiessele
53dcd3f9fa [objective grads] undid the change, as this would lead to dramatic problems in reloading old models using the pickle module 2015-01-13 13:53:28 +00:00
Max Zwiessele
20eff02061 [objective grads] undid the change, as this would lead to dramatic problems in reloading old models using the pickle module 2015-01-13 13:46:49 +00:00
Max Zwiessele
17f42768da [progress] show progress of optimization using optimize(itpython_notebook=True) 2015-01-13 11:57:14 +00:00
Max Zwiessele
1c6cef44b6 [progress] show progress of optimization using optimize(itpython_notebook=True) 2015-01-13 11:49:40 +00:00
Max Zwiessele
b9b6ce91d8 [updates] now handled in observable, should have from the begining :/ 2015-01-13 09:45:11 +00:00
Max Zwiessele
cd8dd9ab98 [optimization prints] unified printouts for optimizers, added ipython_notebook flag for use in ipython notebooks 2015-01-12 15:43:33 +00:00
Max Zwiessele
869a5c4f92 [parent notification] is now priority -1000, instead of -inf 2015-01-12 13:17:34 +00:00
Max Zwiessele
e03d6d4f71 [model print] updates now shown in print out 2015-01-12 11:55:44 +00:00
Max Zwiessele
3aedf63966 [natural gradients] added natural gradients, usable but not analysed 2015-01-12 11:36:53 +00:00
Max Zwiessele
dff577d22b renamed opimizer methods to unobscure gradients and objective 2015-01-12 11:35:57 +00:00
Max Zwiessele
ec42011617 [parameterized] print outs for ipython notebook 2015-01-12 11:33:31 +00:00
Alan Saul
1b27337e7c SVI now working with minibatches 2014-12-22 15:40:49 +00:00
Alan Saul
a8b0d60c3e SVI now implemented without natural natural gradients or batches 2014-12-22 13:35:56 +00:00
James Hensman
b642360ede multi-outputted the svgp inference (buggy, probably) 2014-12-22 12:07:51 +00:00
Alan Saul
7ba2e2ed08 Added svgp in partially broken state ready for multiouputs 2014-12-22 12:00:16 +00:00
Alan Saul
935f2016db Fixed quadrature for bernoulli likelihood, started adding Gaussian likelihood derivatives for quadrature 2014-12-19 17:53:32 +00:00
James Hensman
2de2217473 svgp inference added -- not working yet 2014-12-19 16:48:40 +00:00
Max Zwiessele
35a33f94e8 [html print] more table based corrections for html printing 2014-12-05 16:23:50 +00:00
Max Zwiessele
f2127e17cb Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2014-12-05 11:13:21 +00:00
Max Zwiessele
0e0220921f [html repr] included css styling for html print outs 2014-12-05 11:13:18 +00:00
Zhenwen Dai
1da44d9d5c implement update_gradients_diag for MLP kernel 2014-12-04 14:22:58 +00:00
Max Zwiessele
4fc006f45d [vardtc] sparse gplvm in bayesian gplvm minibatch 2014-12-03 08:35:41 +00:00
Max Zwiessele
865d8e3851 [vardtc] predict with uncertain inputs, the non principled way 2014-12-03 08:34:11 +00:00
Max Zwiessele
d554b1a442 [natgrad] taking the gradient in the old direction, without adjustment 2014-12-03 08:33:33 +00:00
Max Zwiessele
4e91a012e6 [model] update messages a little nicer 2014-11-28 10:11:58 +00:00