Commit graph

4405 commits

Author SHA1 Message Date
Alan Saul
69acbf42af More docs 2013-02-08 11:41:57 +00:00
Alan Saul
50850baa21 More docs testing 2013-02-08 11:34:11 +00:00
Alan Saul
844298fa08 Adding ipython requirements (temporary) and removing unnecessary mock requirement 2013-02-08 11:31:51 +00:00
Alan Saul
92ead7924b Adding ipython extensions 2013-02-08 11:27:57 +00:00
Alan Saul
a32e210863 Taking another bash at executable docs... in vain 2013-02-08 11:27:34 +00:00
Nicolas
1d6885f6d9 small changes in tutorial 2013-02-07 16:09:58 +00:00
Nicolo Fusi
7b1e1eb18b added centering and fixed serious bug 2013-02-07 15:50:45 +00:00
Nicolas
38d2a5f91d Solving merge conflicts 2013-02-07 13:07:18 +00:00
Nicolas
2abaafd882 Modifications made to tutorial due to changes in GPy 2013-02-07 13:04:29 +00:00
Ricardo Andrade
4563a5f8a6 Probit likelihood modified for plotting. 2013-02-07 11:36:45 +00:00
Ricardo Andrade
cf3e522069 Change in plot() y-limits 2013-02-07 11:36:22 +00:00
Ricardo Andrade
02dc5c7b48 Example is working 2013-02-07 11:35:29 +00:00
Nicolò Fusi
baa06181e8 psi statistics working for linear ARD kernel 2013-02-07 10:01:05 +00:00
Nicolo Fusi
2e948d888a precomputations for linear psi statistics 2013-02-06 17:58:42 +00:00
Nicolo Fusi
7d8e2183a2 psi statistics for the linear kernel 2013-02-06 17:51:54 +00:00
Nicolas
8fd79f6eee Added new plotting function for kernels 2013-02-06 15:20:04 +00:00
Nicolo Fusi
71e461a780 added support for sparse matrices 2013-02-06 14:46:23 +00:00
Nicolo Fusi
6959751149 pretty much the version running on ec2 2013-02-06 11:43:23 +00:00
Nicolas
b0f6495ed4 Fixed bug in the product of kernels with tied parameters 2013-02-06 09:52:54 +00:00
Nicolas
a1568ca1c8 Few more fix to the plotings and predictions 2013-02-05 18:57:30 +00:00
Nicolo Fusi
6a6cbb58c8 sometimes a step with missing data can be a bit unstable 2013-02-05 16:40:26 +00:00
Nicolas
642b1449e1 Small fixes to ploting 2013-02-05 14:23:51 +00:00
Nicolas
5b19d8609a Many modifications in GP plots to make it work 2013-02-05 12:27:12 +00:00
James Hensman
4dce1a428f tidying up after wide reaching changes: removed sparse_GP_old.py 2013-02-04 16:42:44 +00:00
James Hensman
bbc7bd8aca various merge conflicts from the newGP branch 2013-02-04 16:15:54 +00:00
James Hensman
687631f719 Merge branch 'newGP'
Conflicts:
	GPy/models/GP_regression.py
2013-02-04 12:41:22 +00:00
James Hensman
dacdaa1b41 simplified the checkgrad logic somewhat 2013-02-04 12:36:08 +00:00
James Hensman
9b69b04933 proper propagation of variance through the Gaussian likelihood 2013-02-04 12:18:14 +00:00
Ricardo Andrade
049e60f16b var[:,None] added in full_cov = false, sparse_GP 2013-02-04 12:01:27 +00:00
James Hensman
7a54660689 fixed bug in my schoolboy mathematics 2013-02-04 10:29:01 +00:00
James Hensman
3a61c39cb8 partial derivatives for the new likelihood framework 2013-02-04 10:22:01 +00:00
Nicolò Fusi
976b27b654 working on linear kernel 2013-02-03 15:00:53 +00:00
Ricardo Andrade
b1e5070ed0 Merge branch 'newGP' of github.com:SheffieldML/GPy into newGP 2013-02-01 17:58:59 +00:00
Ricardo Andrade
5e2baf1919 Changes in plotting functions. 2013-02-01 17:58:21 +00:00
James Hensman
2b756e96e1 made the BGPLVM work in the new world order 2013-02-01 17:42:51 +00:00
James Hensman
f7d2fc6ca4 Merge branch 'newGP' of github.com:SheffieldML/GPy into newGP 2013-02-01 17:13:10 +00:00
James Hensman
5447d6fbfc Assorted work on combining the EP and sparse methods 2013-02-01 17:12:45 +00:00
Ricardo Andrade
24b6dfa086 Classification examples corrected (2/3) 2013-02-01 16:21:26 +00:00
Ricardo Andrade
5593d53828 Merge branch 'newGP' of github.com:SheffieldML/GPy into newGP 2013-02-01 15:17:13 +00:00
Ricardo Andrade
0a8686d7c0 EPEM is running. 2013-02-01 15:14:11 +00:00
Nicolo Fusi
643abdcec7 made it clear that we are working with -f(x) 2013-02-01 14:53:48 +00:00
James Hensman
64280d7eb6 Merge branch 'newGP' of github.com:SheffieldML/GPy into newGP
Conflicts:
	GPy/likelihoods/EP.py
2013-02-01 13:56:28 +00:00
James Hensman
c025e8b68b beginning of work to make sparse GP ork with RA's EP methods 2013-02-01 13:55:19 +00:00
Ricardo Andrade
f941d629e6 James' debugging of the EP/GP interface
It seems that the GP-EP algorithm works now.
2013-02-01 13:45:55 +00:00
Ricardo Andrade
eb04cbed63 merged changes in likelihood_functions (James) 2013-02-01 13:32:13 +00:00
Ricardo Andrade
879fa138e1 Merge branch 'newGP' of github.com:SheffieldML/GPy into newGP
Conflicts:
	GPy/likelihoods/EP.py
	GPy/likelihoods/likelihood_functions.py
2013-02-01 13:19:59 +00:00
Ricardo Andrade
182c4c7d64 So many changes 2013-02-01 13:17:17 +00:00
Nicolas
d8785b534e Fixed bug in the product of kernels 2013-02-01 10:33:00 +00:00
James Hensman
346f9dd8bd added a likelihood atom class
and also some import tidying in the EP.py file
2013-02-01 10:05:22 +00:00
James Hensman
7dfbcebb87 some tidying in the likelihood classes 2013-02-01 09:47:30 +00:00