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Author SHA1 Message Date
Zhenwen Dai
e0321c961a fix psicomp problem 2014-09-05 10:43:46 +01:00
mzwiessele
d06f8b9272 [indexing] maybe? cannot tell, tests are broken 2014-09-04 18:02:34 +01:00
mzwiessele
4886dfde08 [indexing] maybe? cannot tell, tests are broken 2014-09-04 18:01:33 +01:00
Max Zwießele
e49bef9b94 [param] indexing fix, this can be memory intensive if millions of parameters 2014-09-04 17:30:06 +01:00
James McMurray
ca03714331 Added missing comma 
Added missing comma in the hstack call in _get_params.
 2014-09-04 15:46:35 +02:00
Zhenwen Dai
e46f3b342e remove the print message in model.checkgrad 2014-09-02 12:33:52 +01:00
Zhenwen Dai
808cfb0501 Allow the default constraint of a Param object to be 'fixed' 2014-09-02 11:52:09 +01:00
Zhenwen Dai
e332c1e246 more for debug 2014-09-01 18:39:43 +01:00
Zhenwen Dai
ca5067c614 improve debug helper 2014-09-01 15:23:41 +01:00
Zhenwen Dai
1110cc31e6 some progress for parameter tie 2014-08-29 18:52:53 +01:00
Zhenwen Dai
140354c02d Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2014-08-29 15:21:31 +01:00
Zhenwen Dai
a6e7d01ad2 add debug util module and try to debug sparsegp_mpi 2014-08-29 15:21:21 +01:00
mzwiessele
c0bf227985 [dim red plots] plotting big models 
Conflicts:
	GPy/plotting/matplot_dep/dim_reduction_plots.py
 2014-08-28 15:55:00 -07:00
Zhenwen Dai
313a238b15 adapt sparsegp_mpi for normalizer arguement 2014-08-28 18:01:25 +01:00
Zhenwen Dai
91d1cd3131 fix the bug: the randomize function cannot properly handle variables with prior 2014-08-28 17:57:29 +01:00
mzwiessele
7bdbe21cd1 [kernel ard plot] label adjustment 2014-08-27 16:21:03 -07:00
mzwiessele
8cf11257b0 [normalizer] only mean, because variance could be not Gaussian... 2014-08-27 15:47:57 -07:00
mzwiessele
a3c8739f9e [normalize] 2014-08-27 13:07:39 -07:00
mzwiessele
7ec0e75c0e [normalizer] first commit for normalizer in GPy 
Conflicts:
	GPy/core/sparse_gp.py
	GPy/models/bayesian_gplvm.py
 2014-08-27 12:07:24 -07:00
Zhenwen Dai
7ed0e70a46 further bug fix for sparsegp_mpi 2014-08-27 09:45:06 +01:00
Zhenwen Dai
1e1bbb2a26 Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2014-08-26 18:13:04 +01:00
Zhenwen Dai
f29753e9e6 generalize the interface of mpi 2014-08-26 18:12:41 +01:00
Ricardo
5a6347a6ba Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2014-08-26 17:06:48 +01:00
Ricardo
993c3421f4 Noise parameters built depending on Y_metadata 2014-08-26 17:06:09 +01:00
Zhenwen Dai
a853d060fb recover the ss_gplvm.py 2014-08-26 16:46:28 +01:00
Zhenwen Dai
0947112f3c Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2014-08-26 16:38:04 +01:00
Zhenwen Dai
77a96efeba improve numerical stability of vardtc_parallel 2014-08-26 16:38:00 +01:00
mzwiessele
d000893878 [ard] enhanced ard handling and plotting 
Conflicts:
	GPy/kern/_src/linear.py
	GPy/models/ss_gplvm.py
 2014-08-25 09:55:58 -07:00
mzwiessele
3972b4bd9a [linear] einsums 2014-08-19 10:41:53 -07:00
mzwiessele
22de3ab676 [pickling] wb as write parameter 2014-08-19 10:39:13 -07:00
Zhenwen Dai
80adaed616 a bug fix for psi statistics related model pickle 2014-08-19 12:12:07 +01:00
Zhenwen Dai
b9fdbedf20 update additive kernel for SSGPLVM 2014-08-18 18:14:16 +01:00
Zhenwen Dai
f5f90b3a2c fix the pickle problem for models with psi statistics 2014-08-18 18:03:08 +01:00
Zhenwen Dai
abcea70291 some further performance improvement for linear kernel psi statistics 2014-08-18 17:30:59 +01:00
Zhenwen Dai
3d322301a2 linear kernel psi statistics performance optimization 2014-08-18 16:44:15 +01:00
Zhenwen Dai
6b8ac70210 minor changes on SSGPLVM 2014-08-18 15:17:52 +01:00
Alan Saul
4fbec91eda Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2014-08-15 18:22:30 +01:00
Alan Saul
0b3f8b3cc7 Added kronecker and variational gaussian approximation gp's, vargpapprox needs generalising to any factorizing likelihood 2014-08-15 18:22:09 +01:00
mzwiessele
5f863e8ca2 [parameterization] Parameter adding more robust and better error handling 2014-08-15 08:40:17 -07:00
Zhenwen Dai
051a8115a2 Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2014-08-13 14:10:55 +01:00
Zhenwen Dai
2fb86f9b51 fix the bug of caching w.r.t. ignore arguments 2014-08-13 14:10:44 +01:00
Ricardo
ac61282e11 Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2014-08-13 13:52:01 +01:00
Ricardo
1b9995776b minor changes in ICM 2014-08-13 13:51:39 +01:00
James Hensman
fe405271e5 gradients of predictions for Trevor 2014-08-13 10:36:54 +01:00
James Hensman
3fc603f778 more bugfix 2014-08-12 12:02:16 +01:00
James Hensman
4139397dd3 bugfix merge! 2014-08-12 11:58:28 +01:00
James Hensman
7a8a622b5d strange bug in np.einsum fixed when using the _out_ argument (thanks T. Cohn) 2014-08-12 11:27:50 +01:00
Zhenwen Dai
1061bf5248 change for ssgplvm example 2014-08-12 10:38:58 +01:00
Zhenwen Dai
785c580032 merge the current devel into psi2 2014-08-11 18:01:23 +01:00
Zhenwen Dai
9f1bd3ef25 fix kern/__init__.py 2014-08-11 15:08:08 +01:00