Commit graph

4405 commits

Author SHA1 Message Date
Neil Lawrence
b8a09bfff7 Remove symbolic import. 2014-10-16 15:45:10 +01:00
Neil Lawrence
4be2ef267d Remove symbolic import. 2014-10-16 15:44:55 +01:00
Neil Lawrence
4a93e75ce2 Remove symbolic import. 2014-10-16 15:42:15 +01:00
Neil Lawrence
cf4469053e Remove symbolic import. 2014-10-16 15:41:54 +01:00
James Hensman
30343f5e53 more variational quadtrature code 2014-10-16 15:41:01 +01:00
Max Zwiessele
9bfd569c7b Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2014-10-16 14:39:29 +01:00
Max Zwiessele
682854892b [missingdata] file for missing data was missing O_o 2014-10-16 14:39:26 +01:00
James Hensman
4c9da0e10e Merge branch 'devel' of github.com:sheffieldml/GPy into devel 2014-10-16 14:18:49 +01:00
James Hensman
4e85bb2ee3 more removal of references to broken files 2014-10-16 14:18:30 +01:00
Max Zwiessele
4e8fbebe27 Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2014-10-16 14:18:02 +01:00
Max Zwiessele
3d45870846 [stochastics] holds stochastic updates and rules 2014-10-16 14:17:49 +01:00
James Hensman
50963ae28d fixing more issues cauesd by removal of symbolic.py 2014-10-16 14:09:29 +01:00
James Hensman
3b2d16a0e2 docstrings 2014-10-16 14:02:02 +01:00
James Hensman
76598bac41 commented out stochastics.py -- not added 2014-10-16 13:44:34 +01:00
Max Zwiessele
26396939e5 [vardtc] missing data handling and stochastic update in d 2014-10-16 12:52:17 +01:00
Max Zwiessele
3358d06e42 Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2014-10-16 12:43:19 +01:00
Max Zwiessele
93ca35b319 [whitespaces] 2014-10-16 12:43:15 +01:00
Max Zwiessele
4f89c25321 [cacher] now taking over the attributes from cached functions, such as docstring 2014-10-16 12:41:02 +01:00
James Hensman
4bc29c1553 Merge branch 'devel' of github.com:sheffieldml/GPy into devel 2014-10-16 12:30:41 +01:00
James Hensman
c51337ce09 removed reference to symbolic.py, which NDL deleted 2014-10-16 12:30:18 +01:00
James Hensman
129171e1f7 removed reference to symbolic.py, which NDL deleted 2014-10-16 12:25:09 +01:00
James Hensman
d9005cd19e Merge branch 'devel' of github.com:sheffieldml/GPy into devel 2014-10-16 12:23:55 +01:00
James Hensman
84c87f7886 beginning of adding variational GH quadrature to the likelihood class 2014-10-16 12:14:56 +01:00
Neil Lawrence
082ae150de Attempt to align numbers to right 2014-10-16 04:29:06 +01:00
Neil Lawrence
5189ccaf38 Merge branch 'devel' of https://github.com/SheffieldML/GPy into devel 2014-10-16 04:06:40 +01:00
Neil Lawrence
8fa890639e Display of models and params for the notebook. 2014-10-16 04:06:03 +01:00
James Hensman
f9a16059e4 weaved some slow functions in the stationary class. We now fall back (and latch) to numpy if weave fails 2014-10-16 01:28:41 +01:00
James Hensman
5962035b54 Merge branch 'devel' of github.com:sheffieldml/GPy into devel 2014-10-12 16:00:56 +01:00
Alan Saul
7916c5f9ea Stopped rounding to int in priors printing 2014-10-10 17:19:37 +01:00
Max Zwiessele
9b3498a912 [datasets] deng et all, labels revisited 2014-10-10 11:07:07 +01:00
Max Zwiessele
c128c6f948 [kern psi2] added flag for returning psi2 in N, not used yet, see #139 2014-10-10 11:06:21 +01:00
Max Zwiessele
829e40b25c [missing_data in sparse gp] can be extended towards missing_data handling in gp itself. Setting up gpy issue 2014-10-09 10:34:01 +01:00
Max Zwiessele
de801c9d29 [datasets] updated deng loading pandas bugs... 2014-10-09 10:32:32 +01:00
Max Zwiessele
d954829a40 [pca] missing data is now handled as mean 2014-10-09 08:40:15 +01:00
Max Zwiessele
a63278c234 Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2014-10-08 12:03:54 +01:00
Max Zwiessele
fa7807ee6f [missing data] general implementation for subsetting data 2014-10-08 12:03:51 +01:00
James Hensman
fd4404a11a minor bugfix on windows (thanks NC) 2014-10-07 16:20:16 +01:00
James Hensman
3e07b207a9 whitespace 2014-10-06 11:49:02 +01:00
Max Zwiessele
d93fac8c13 [datasets] deng et al. single cell experiment prints for ipython notebook 2014-10-06 11:00:57 +01:00
Max Zwiessele
919be3ceba [vardtc missing data] updated to new psi2 stuff 2014-10-06 11:00:34 +01:00
Max Zwiessele
6a260409fa [param_to_array] deprecated and removed param_to_array from code, use param.values instead 2014-10-06 08:59:24 +01:00
Ricardo
c1d998e272 Another bug fixed 2014-10-03 12:02:58 +01:00
Ricardo
45f8751769 Bug fixed 2014-10-03 11:55:58 +01:00
Ricardo
94b19242f0 HalfT prior is working 2014-10-03 11:37:09 +01:00
Ricardo
657c78ba34 Half_t prior (Martin's contribution) 2014-10-03 10:07:58 +01:00
James Hensman
f4718edfb8 edited coregionalize implementation 2014-09-30 16:44:55 +01:00
James Hensman
9081c8ee96 optionally unweaved the coregionalize kernel
coregionalize shoudl now work without weave. Added kernel tests also.
2014-09-29 10:22:50 +01:00
Zhenwen Dai
afbb8ab253 bug fix for extending prod kernel 2014-09-24 15:08:02 +01:00
Zhenwen Dai
10bfb47aa6 add set_X and set_Y interface to gp model 2014-09-24 14:36:25 +01:00
Zhenwen Dai
88dc6f25a2 Merge branch 'devel' for extending prod kernel 2014-09-24 13:45:49 +01:00