Commit graph

1731 commits

Author SHA1 Message Date
James Hensman
d703afd96a some work in the Gaussian likelihood 2013-12-11 16:03:36 -08:00
James Hensman
f1a08fbfdb mostly docstring noodling 2013-12-11 15:42:25 -08:00
James Hensman
9011d8fe2f some noodling around in the likelihoods 2013-12-10 14:51:11 -08:00
James Hensman
d8a627c1d8 fixed bug introduced my merge 2013-12-10 12:17:59 -08:00
James Hensman
8d5fc8a2e2 merged in params 2013-12-10 11:56:35 -08:00
Max Zwiessele
a3bf662fd3 array handling in plotting and weave 2013-12-09 00:19:37 +00:00
Max Zwiessele
e1bb3e508e naming and pil changes 2013-12-07 18:45:24 +00:00
James Hensman
fed4134727 modified docstrings 2013-12-06 16:47:08 -08:00
James Hensman
e6593db781 adding empyy init file 2013-12-06 15:54:01 -08:00
James Hensman
ee68377f5e more work on the posterior class 2013-12-06 11:48:32 -08:00
James Hensman
83a49f132a Added the structure to posterior.py to enable...
to enable computation from the posterior mean and variance, instead of
the woodbury componnents

This iss the first step in being able to use this structre for EP and
the laplace approximation.
2013-12-06 09:50:01 -08:00
James Hensman
5ec64d2279 more massive and destructive changes everywhere 2013-12-05 15:09:31 -05:00
James Hensman
881800126f many dramatic cahnges. at least it import without error. 2013-12-05 13:49:38 -05:00
James Hensman
7812a7dc7d moved functional part of sparseGP to inference/dtcvar 2013-12-05 10:56:18 +00:00
James Hensman
3549a676a8 tidied up gp_base and gp 2013-12-04 20:12:40 +00:00
James Hensman
f5bae4450f Lots of tidying in the inference section 2013-12-04 17:58:02 +00:00
James Hensman
435cbbc421 adding exact gaussian inference 2013-12-04 12:02:30 +00:00
James Hensman
48c292d263 added some docstrings and the posterior class structure 2013-12-04 11:50:18 +00:00
James Hensman
326c74ef8a messing wih he inference directory now 2013-12-04 11:34:14 +00:00
James Hensman
83a495645d some more messing with the likelihood directory 2013-12-04 11:32:12 +00:00
James Hensman
daaad3c30c first commit in new structure 2013-12-04 11:20:25 +00:00
Neil Lawrence
b502efb1c5 Changes to symbolic. 2013-11-13 07:57:57 +00:00
Max Zwiessele
505e5e9210 latest updates for ties, still bery buggy, considering restructuring... 2013-11-12 14:01:29 +00:00
Max Zwiessele
851e6ec8e9 simple tieing now working, still buggy though, progress with care 2013-11-12 12:17:14 +00:00
Max Zwiessele
6c60eef4bd biiig changes in tieing, and printing -> hirarchy now always shown 2013-11-11 17:46:33 +00:00
James Hensman
ed6a45fd9b minor edits, like spacing, spelling 2013-11-07 20:29:40 +00:00
Max Zwiessele
cb9056d729 added variational 2013-11-07 13:55:24 +00:00
Max Zwiessele
765ab41045 bgplvm integrated 2013-11-07 08:52:33 +00:00
Max Zwiessele
8c02e4af36 added BGPLVM in parameterized 2013-11-06 15:15:13 +00:00
Max Zwiessele
3316d29341 added gplbm and sparse gp to new parameterized structure 2013-11-06 11:40:54 +00:00
Max Zwiessele
c8eac84d55 Merge branch 'params' of github.com:SheffieldML/GPy into params 2013-11-06 08:59:32 +00:00
Max Zwiessele
1a6086546e updated scg messages 2013-11-06 08:59:25 +00:00
Max Zwiessele
6feb5dd2f1 adjusted parameters to report their changes 2013-11-03 13:58:15 +00:00
Max Zwiessele
067206e83e tutorial update and X observer 2013-10-28 09:14:56 +00:00
Max Zwiessele
d8151eee61 X caching is not yet done, parameter caching working fine. X cache must be adjusted to update at the right times 2013-10-27 17:04:46 +00:00
Max Zwiessele
d3721b76a8 changing all parameterized objects to be compatible with the new parameterization 2013-10-25 15:29:04 +01:00
Max Zwiessele
e1bee4536a adjusted gaussian likelihood to new parameterization 2013-10-22 16:18:04 +01:00
Max Zwiessele
5ab7303226 gp_base newly paramterized 2013-10-22 16:17:41 +01:00
Max Zwiessele
21dd82f8d9 updated white, bias and rbf to new parameter handling 2013-10-22 16:17:13 +01:00
Max Zwiessele
27724fd456 GPRegression working, gradients still todo 2013-10-22 16:16:54 +01:00
Max Zwiessele
9a70f27010 first adjustments to the model and gps -> updates and gradient transforms 2013-10-22 13:41:01 +01:00
Max Zwiessele
d12f055115 parameters have a update hirarchy, in which updates to parameters are hirarchically pursuit 2013-10-22 13:39:58 +01:00
Max Zwiessele
7f05dd4a43 likelihood is now parameterized 2013-10-22 13:38:46 +01:00
Max Zwiessele
e70203a1b2 kern is now parameterized 2013-10-22 13:38:33 +01:00
Max Zwiessele
fba121c826 kern is now parameterized 2013-10-22 13:38:29 +01:00
Max Zwiessele
d5afb3b797 parameters now work efficiently, tieing is iwth observer pattern 2013-10-18 16:20:01 +01:00
Max Zwiessele
6be05de791 still todo: untie, gradients, priors, print ties 2013-10-17 20:47:41 +01:00
Max Zwiessele
945f192ee2 parameter_testing has to be written new 2013-10-17 14:40:26 +01:00
Max Zwiessele
055eb3b70b starting to sort out likelihoods WARNING not working 2013-10-17 14:39:44 +01:00
Max Zwiessele
bc765134c0 make sure _init_ is not overriden 2013-10-17 14:37:39 +01:00