1647 commits

This branch

This branch

All branches

Author	SHA1	Message	Date
mu	b845c0d634	constructor and init for ODE_UY	2013-11-18 10:43:58 +00:00
Nicolò Fusi	dc12fb43b7	Added configuration file ... this was done to solve the OpenMP problem on Windows/mac, but I think it is useful in general. All unit tests pass except the sympy kern ones.	2013-10-15 16:04:03 -07:00
Neil Lawrence	a4c0a941be	Added xw_pen data.	2013-10-15 05:53:39 +01:00
Neil Lawrence	491eb7243a	Added xw_pen data.	2013-10-15 05:49:11 +01:00
Neil Lawrence	e1ff91ff3c	Merge branch 'devel' of https://github.com/SheffieldML/GPy into devel	2013-10-14 22:09:47 +01:00
Neil Lawrence	da2a88826d	Basic sim code functional.	2013-10-14 22:09:41 +01:00
James Hensman	c3de628e99	docstrinfs in kern.py	2013-10-14 17:11:39 +01:00
Neil Lawrence	fe30db1331	Updated sympy code, multioutput grad checks pass apart from wrt X. Similar problems with prediction as to sinc covariance, needs investigation.	2013-10-14 09:37:35 +01:00
Neil Lawrence	66daf2ad45	Merge branch 'devel' of https://github.com/SheffieldML/GPy into devel	2013-10-14 05:59:36 +01:00
Neil Lawrence	a92780cb89	Added olivetti faces data set. It required adding netpbmfile.py a bsd licensed pgm file reader from Christoph Gohlke, which doesn't seem to have a spearate installer. Also modified image_show to assume by default that array ordering is python instead of fortran. Modified brendan_faces demo to explicilty force fortran ordering. Notified Teo of change.	2013-10-14 05:59:15 +01:00
Nicolò Fusi	6945ad7aa1	Seems to work on windows now ... not everything works yet, but I've identified the main issues. Still TODO: handle missing OMP libraries gracefully	2013-10-11 16:19:27 -07:00
Neil Lawrence	de0a5d0e70	Some fixes and changes to the sympykern.	2013-10-09 12:07:39 +01:00
Neil Lawrence	b2cea56c11	Merge branch 'devel' of https://github.com/SheffieldML/GPy into devel	2013-10-09 11:14:47 +01:00
Neil Lawrence	1a46026015	Fixed stick datasets bug ... but sympykern is currently in a rewrite so will be broken	2013-10-09 11:14:42 +01:00
James Hensman	a59d980327	Nparam changes to num_params	2013-10-08 14:49:18 +01:00
James Hensman	39eb0368d8	changes Nparts for num_parts in kern	2013-10-08 12:30:14 +01:00
Andreas	958e9f7c7a	Merge branch 'devel' of github.com:SheffieldML/GPy into devel	2013-10-08 11:31:13 +01:00
Andreas	05a912f40b	minor changes	2013-10-08 11:31:06 +01:00
Andreas	f008c1919b	Normalize Y given as an argument to constructor	2013-10-08 11:28:15 +01:00
Neil Lawrence	87200c6e12	Merge branch 'devel' of https://github.com/SheffieldML/GPy into devel	2013-10-08 08:25:33 +01:00
Neil Lawrence	966fe49345	Added first draft of functionality for multiple output sympy kernels.	2013-10-08 08:25:26 +01:00
Ricardo	46eca3bbdd	Plots tidied up.	2013-10-07 12:41:20 +01:00
Ricardo	b20ea09f89	Modifications to allow noise_model related parameters.	2013-10-07 12:39:23 +01:00
Ricardo	d2bc9044fe	Coregionalization examples fixed.	2013-10-07 12:35:55 +01:00
Ricardo	d6095de224	Sampling function added.	2013-10-07 12:34:38 +01:00
Neil Lawrence	f5b16a13aa	Merge branch 'devel' of https://github.com/SheffieldML/GPy into devel	2013-09-30 22:51:13 +01:00
Neil Lawrence	e06d889d35	Added capability for sinc covariance via sympy kernel.	2013-09-30 22:51:07 +01:00
mu	033a22ccbe	Merge branch 'devel' of https://github.com/SheffieldML/GPy into devel	2013-09-30 17:17:42 +01:00
mu	b7f88991af	testing ODE	2013-09-30 17:17:38 +01:00
Neil Lawrence	0d4fd01ae1	Minor changes to della_gatta example (multiple optima).	2013-09-30 17:00:38 +01:00
Neil Lawrence	7a5c5649c3	Replaced check for sympy in constructors.py.	2013-09-30 13:35:39 +01:00
Neil Lawrence	b815dd98d1	Change to criterion on positive definite check (epsilon*10 instead of epsilon).	2013-09-30 08:23:25 +01:00
Neil Lawrence	eee597f9ab	Remove coregionalization test as it's causing a core dump! Need to chase this up.	2013-09-30 08:16:25 +01:00
Neil Lawrence	a3f3950262	Merge branch 'devel' of https://github.com/SheffieldML/GPy into devel	2013-09-30 08:14:31 +01:00
Neil Lawrence	1581f78412	Updates to sympykern including bug fixes and ability to name covariance. Include test for rbf_sympy in kernel tests. Remove coregionalization test as it's causing a core dump! Need to chase this up.	2013-09-30 08:14:25 +01:00
James Hensman	00cbb5f742	some tidying in the EP likelihood ... Changes self.N to self.num_data for consistency with everywhere else added the factor of 2pi to Z.	2013-09-27 17:39:38 +01:00
James Hensman	0dc987de15	Merge branch 'devel' of github.com:SheffieldML/GPy into devel	2013-09-24 17:30:54 +01:00
James Hensman	f209477885	allowed passing of factr to bfgs algorithm	2013-09-24 11:49:47 +01:00
Neil Lawrence	527f4ca469	Merge branch 'devel' of https://github.com/SheffieldML/GPy into devel	2013-09-24 06:15:19 +02:00
Neil Lawrence	0509b6f9d0	Added missing files.	2013-09-24 06:15:09 +02:00
Ricardo	0ae9f9aafd	Fixing W_columns and num_outputs nomenclature	2013-09-23 17:29:33 +01:00
Neil Lawrence	c800e0687f	Added missing file.	2013-09-23 12:24:26 +01:00
Neil Lawrence	a6c89b58f0	missing ... file	2013-09-23 10:59:57 +01:00
Neil Lawrence	4154a4afb6	Merging changed files.	2013-09-21 12:17:59 +01:00
Neil Lawrence	94ddfa7973	Merging changed files.	2013-09-21 12:15:58 +01:00
James Hensman	a976d2b42b	Merge branch 'devel' of github.com:SheffieldML/GPy into devel	2013-09-20 18:15:55 +01:00
James Hensman	469cbd815d	adding extra tests for bgplvm	2013-09-20 18:15:45 +01:00
James McMurray	7ff48c2f91	Merge pull request #82 from jamesmcm/devel ... Devel	2013-09-20 09:47:36 -07:00
James McMurray	aa5ebcbd8f	Fixed more errors in docs 2	2013-09-20 17:46:23 +01:00
James McMurray	7f2472fa22	Fixed more errors in docs	2013-09-20 17:43:56 +01:00