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Author SHA1 Message Date
Akash Kumar Dhaka
b58c8a0ab9 bug fix to prevent infinite loop because of incorrect stopping condition 2017-06-17 19:01:04 +03:00
Akash Kumar Dhaka
f9a0325b9e adding some test cases for EP.. more work needs to be done, these are some high level test cases .. 2017-06-12 13:46:50 +03:00
Zhenwen Dai
bd8947c8c2 Merge pull request #512 from pgmoren/EP_refactor 
Refactor EP/EPDTC
 2017-06-09 18:01:56 +01:00
Moreno
dd0d8f7862 Refactor EP and EPDTC 2017-06-08 11:00:17 +01:00
Zhenwen Dai
8569424933 Merge pull request #508 from esiivola/EP_refactor 
Bring the ongoing working about EP refactoring
 2017-06-02 11:59:46 +02:00
esiivola
a5c06b195d Added initial version of the refactored EP 2017-06-01 02:40:01 +03:00
esiivola
7d996e79e9 Added initial version of the refactored EP 2017-06-01 02:38:17 +03:00
esiivola
be192779a0 Added initial version of the refactored EP 2017-06-01 02:19:58 +03:00
mzwiessele
845168af3b fix: pkg: CHANGELOG 2017-04-12 11:54:11 +01:00
mzwiessele
e554eeba64 Bump version: 1.6.1 → 1.6.2 2017-04-12 11:53:27 +01:00
mzwiessele
480aedb74a fix: updated keywords 2017-04-12 11:53:05 +01:00
Max Zwiessele
a5ba3057ec Merge pull request #491 from alexfeld/parallel_opt 
fix for parallel optimization
 2017-04-12 11:28:46 +01:00
Zhenwen Dai
2f7ab3f5c7 Merge pull request #492 from pgmoren/devel 
We did some benchmarking on classification. These changes should be fine. Let's merge it in.
 2017-03-27 13:26:27 +01:00
Max Zwiessele
cc4606beb6 Merge pull request #489 from SheffieldML/linalg_cython-1 
cython in linalg fix #458
 2017-03-23 11:45:37 +00:00
Moreno
0c248e7520 Changes in EP/EPDTC to fix numerical issues and increase the flexibility of the inference. 
Changes to avoid numerical issues and improve the performance:
    - Keep value of the EP parameters between calls
    - Enforce positivity of tau_tilde
    - Stable computation of the EP moments for the Bernoulli likelihood
    - Compute marginal in the GP model without directly inverting tau_tilde

    Changes to improve the flexibility:
    - Add parameter for maximum number of iterations
    - Distinguish between alternated/nested mode
    - Distinguish between sequential/parallel updates in EP
 2017-03-22 13:40:06 +00:00
Alex Feldstein
4e8c95055c fix in sparse_gp_mpi optimizer 2017-03-20 13:27:25 -04:00
Alex Feldstein
221f7f792f fix for parallel optimization 2017-03-17 19:32:47 -04:00
Max Zwiessele
bc59dc4ee0 cython in linalg 
did set cython to working if linalg_cython was importable.
 2017-03-10 08:05:36 +00:00
Max Zwiessele
627c878455 Merge pull request #486 from SheffieldML/deploy 
Merge pull request #471 from SheffieldML/devel
 2017-03-02 14:07:42 +00:00
Max Zwiessele
013064fa41 Merge pull request #471 from SheffieldML/devel 
new version
 2017-03-02 14:07:06 +00:00
mzwiessele
11d332566c chg: pkg: CHANGELOG update 2017-02-28 10:04:47 +00:00
mzwiessele
6fe8c69e81 Bump version: 1.6.0 → 1.6.1 2017-02-28 10:04:36 +00:00
mzwiessele
67b497e5df fix: beiwang will add GMM in full 2017-02-28 10:04:07 +00:00
mzwiessele
e9d302c87a chg: pkg: CHANGELOG update 2017-02-28 08:44:52 +00:00
mzwiessele
019522be0d Bump version: 1.5.9 → 1.6.0 2017-02-28 08:44:39 +00:00
mzwiessele
43bb5e3a1d fix: kernel tests and variational tests 2017-02-28 08:41:33 +00:00
mzwiessele
920765bcce fix: plotting tests for new matplotlib 2017-02-24 13:10:00 +00:00
mzwiessele
9357c01a61 Merge branch 'devel' into alexfeld-offline_plotly 2017-02-23 16:04:13 +00:00
mzwiessele
9ccbaec0dd fix: model tests numpy integer error 2017-02-23 16:03:53 +00:00
mzwiessele
5f7c074645 Merge branch 'devel' into alexfeld-offline_plotly 2017-02-23 15:17:01 +00:00
mzwiessele
f44d787a8d fix: replot with new matplotlib 2017-02-23 15:15:58 +00:00
mzwiessele
b65c9ba443 fix: offline plotting workaround with squeezing arrays 2017-02-23 15:15:22 +00:00
mzwiessele
84cf13ea8f Merge branch 'offline_plotly' of git://github.com/alexfeld/GPy into alexfeld-offline_plotly 2017-02-23 14:45:43 +00:00
mzwiessele
6cd13ac2b3 fix: Fixed numpy 1.12 indexing and shape preservation 2017-02-23 14:45:18 +00:00
Alex Feldstein
362537c7d9 provide two classes for plotly plots to remove global variable 2017-02-23 08:59:47 -05:00
mzwiessele
afe37dbfd8 fix: pkg: changelog 2017-02-23 13:16:14 +00:00
mzwiessele
5f40443fd5 Bump version: 1.5.8 → 1.5.9 2017-02-23 13:15:40 +00:00
mzwiessele
3c7a1c4281 Merge remote-tracking branch 'origin/deploy' into devel 2017-02-23 13:15:25 +00:00
mzwiessele
ac06d23d48 chg: pkg: CHENGELOG update 2017-02-23 13:14:12 +00:00
mzwiessele
4ebeb96e9e Bump version: 1.5.7 → 1.5.8 2017-02-23 13:13:42 +00:00
mzwiessele
0fc8110538 fix: pkg: dim reduction simulation with different functions 2017-02-23 13:13:34 +00:00
Alex Feldstein
977aee2b47 add offline plotting for plotly 2017-02-22 16:28:37 -05:00
Zhenwen Dai
e74a31c482 Update ss_gplvm.py 
resolve the future warning: FutureWarning:comparison to `None` will result in an elementwise object comparison in the future.
 2017-01-29 11:38:13 +00:00
Max Zwiessele
fce0e4258b Merge pull request #472 from SheffieldML/predictive_gradients 
fix: predictive_gradients for new posterior class
 2017-01-10 15:43:56 +00:00
mzwiessele
6fc0cc630c fix: predictive_gradients for new posterior class 2017-01-10 14:38:09 +00:00
Max Zwiessele
f36a394766 Merge pull request #470 from SheffieldML/plotting_fix 
Plotting fix
 2017-01-10 13:48:28 +00:00
mzwiessele
b17b92043c chg: pkg: CHANGELOG update 2017-01-10 12:53:34 +00:00
mzwiessele
3608cff438 Bump version: 1.5.6 → 1.5.7 2017-01-09 11:05:20 +00:00
mzwiessele
b6d2cf4406 fix: removed additional dict line 2017-01-09 11:01:30 +00:00
mzwiessele
fe3bad7200 fix: plotting also allows 3D (capitals) 2017-01-09 10:59:51 +00:00