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262 commits

Author SHA1 Message Date
James Hensman
ecfffc97e6 even more data plotting 2013-10-28 22:11:08 +00:00
James Hensman
e5487bff19 fixed plotting isue with plot_f 2013-10-28 21:41:10 +00:00
Alan Saul
9a32c5edda Merge remote-tracking branch 'gpy_real/devel' 2013-10-28 16:21:11 +00:00
James Hensman
a889b0b7b5 fixed up plotting in sparse_gp also 2013-10-26 20:44:58 +01:00
James Hensman
eedeaa4492 fixed up the plotting 2013-10-26 19:57:21 +01:00
James Hensman
1fe92b2515 fixed up plot in GP_base 2013-10-26 15:01:35 +01:00
Alan Saul
ba1cf96cb1 Merged with devel 2013-10-25 12:30:20 +01:00
James Hensman
eeb5f59fca improved docstrings in svigp 2013-10-24 22:06:07 +01:00
James Hensman
683f45366b some tidying in gp.py 2013-10-24 21:58:51 +01:00
James Hensman
bddb22f4af docstrings and removal of duplicated plotting code in gp_base 2013-10-24 21:30:23 +01:00
Alan Saul
7b6a56f83c Added log predictive density, ln p(y*|D) 2013-10-23 18:39:48 +01:00
Alan Saul
a0aac76812 Merge remote-tracking branch 'gpy_real/devel' into merge_branch 2013-10-15 10:40:51 +01:00
Neil Lawrence
da2a88826d Basic sim code functional. 2013-10-14 22:09:41 +01:00
Alan Saul
94b53af158 Merge remote-tracking branch 'gpy_real/devel' into merge_branch 2013-10-08 16:34:24 +01:00
James Hensman
a59d980327 Nparam changes to num_params 2013-10-08 14:49:18 +01:00
Alan Saul
5765b7e534 Merge remote-tracking branch 'gpy_real/devel' into merge_branch 2013-10-08 12:15:56 +01:00
Andreas
958e9f7c7a Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2013-10-08 11:31:13 +01:00
Andreas
05a912f40b minor changes 2013-10-08 11:31:06 +01:00
Ricardo
46eca3bbdd Plots tidied up. 2013-10-07 12:41:20 +01:00
Ricardo
b20ea09f89 Modifications to allow noise_model related parameters. 2013-10-07 12:39:23 +01:00
Alan Saul
8343615098 Integrated Laplace and merged Merge remote-tracking branch 'gpy_real/devel' into merge_branch 
Conflicts:
	GPy/core/gp.py
	GPy/likelihoods/__init__.py
	GPy/likelihoods/likelihood_functions.py
	GPy/likelihoods/link_functions.py
 2013-10-03 16:52:02 +01:00
Ricardo
0ae9f9aafd Fixing W_columns and num_outputs nomenclature 2013-09-23 17:29:33 +01:00
James McMurray
aa5ebcbd8f Fixed more errors in docs 2 2013-09-20 17:46:23 +01:00
Ricardo
c129b98b3b Merge branch 'devel' of github.com:SheffieldML/GPy into devel 
Conflicts:
	GPy/examples/classification.py
 2013-09-20 15:55:48 +01:00
Ricardo
3288b8379f Please stop breaking this module 2013-09-20 15:51:06 +01:00
James McMurray
5bf20f7bd7 Merge branch 'devel' of git://github.com/SheffieldML/GPy into devel 2013-09-20 14:29:33 +01:00
James McMurray
be3880c0bd Fixed docstring warnings - could still be mistakes 2013-09-20 13:38:20 +01:00
Ricardo
802835773f Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2013-09-20 13:23:58 +01:00
Ricardo
a51af5b8c4 epsilon and power_ep now are parameters of update_likelihood. 2013-09-20 13:22:38 +01:00
James Hensman
7af2d62ee6 do_test_latents appears to be working now 2013-09-20 13:03:24 +01:00
James McMurray
c36a6b341c Started fixing docs 2013-09-20 11:15:41 +01:00
Ricardo
99c3af63c4 Bug in prod-coreg kernels fixed, not in the most elegant way though 2013-09-18 17:57:17 +01:00
Ricardo
80e149e4af function grep_model added, works like print model, but accepts regexp 2013-09-18 14:47:22 +01:00
Ricardo
a1a8486bc3 Redundant code commented 2013-09-17 16:54:31 +01:00
Ricardo
299f17ee46 Samples in plot_f fixed for sparse_models 2013-09-17 16:54:12 +01:00
Ricardo
b3fe19fa0b Comments added to assertions 2013-09-17 16:53:15 +01:00
Ricardo
6f8a1f81c4 random 2 bug neutralized... not fixed 2013-09-17 14:25:59 +01:00
Ricardo
127340d17d likelihoods are now Parameterized objects 2013-09-16 15:45:23 +01:00
Ricardo
603aa18482 Merge branch 'devel' of github.com:SheffieldML/GPy into devel 
Conflicts:
	GPy/examples/regression.py
	GPy/kern/constructors.py
	GPy/testing/kernel_tests.py
	GPy/util/multioutput.py
 2013-09-16 12:32:42 +01:00
Ricardo
1931e447f4 print_all function removed, print m works as before. 2013-09-16 12:24:37 +01:00
Neil Lawrence
dffa9541c2 Merged conflict of model.py 2013-09-14 20:05:42 +01:00
Neil Lawrence
00d335444d Changed kern.py so that X2 is correctly passed as None to the kern parts for dK_dX. Modified several kern parts so that dK_dX is correctly computed (factors of 2 missing). Removed spurious factors of 2 from gplvm, bcgplvm, sparse_gp and fitc code. 2013-09-14 20:02:40 +01:00
Ricardo
1bc9374717 linK2_functions2 merged 2013-09-13 18:09:59 +01:00
Ricardo
f8c9e6b982 Merge branch 'linK_functions2' into devel 
Conflicts:
	GPy/core/gp.py
	GPy/core/gp_base.py
	GPy/core/sparse_gp.py
	GPy/examples/regression.py
	GPy/kern/constructors.py
	GPy/kern/parts/coregionalise.py
	GPy/models/__init__.py
	GPy/models/sparse_gp_classification.py
	GPy/util/__init__.py
 2013-09-13 15:57:34 +01:00
Ricardo
329da293f8 duplicated line erased 2013-09-13 13:00:54 +01:00
Ricardo
62daa978d3 Likelihood gradients for heteroscedastic noise 2013-09-13 12:45:58 +01:00
Ricardo
ea7c18fccc Changes in plot functions, to allow 1D multiple outputs visualization 2013-09-13 12:36:32 +01:00
Ricardo
f0569d6d88 docstrings in new functions 2013-09-13 12:35:12 +01:00
Alan Saul
6e405319b0 Merge remote-tracking branch 'gpy_real/devel' into merge_branch 2013-09-12 10:27:40 +01:00
James Hensman
0070a73004 Fixed Alans checkgrad bug 2013-09-12 10:20:28 +01:00