Commit graph

3514 commits

Author SHA1 Message Date
James Hensman
304db40f5b improved kernel plotting 2014-11-03 14:03:37 +00:00
Alan Saul
7760730230 Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2014-11-03 13:39:12 +00:00
Zhenwen Dai
78b50db138 add new inference X 2014-11-03 13:38:28 +00:00
Alan Saul
1385c3b271 Removed pod dependency for pickle tests 2014-11-03 13:36:46 +00:00
Alan Saul
02c903c4eb Tidied up laplace warnings 2014-11-03 13:36:26 +00:00
Zhenwen Dai
78be1464be Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2014-11-03 12:18:11 +00:00
Zhenwen Dai
74765d0e0d refine the docstring for hmc 2014-11-03 12:18:04 +00:00
Zhenwen Dai
6625e27fec Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2014-11-03 12:05:52 +00:00
Zhenwen Dai
b39188a5cd add __init__.py to mcmc 2014-11-03 12:05:49 +00:00
Alan Saul
eea6c15802 Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2014-11-03 12:05:09 +00:00
Zhenwen Dai
f7ecfed179 add documentation for hmc 2014-11-03 12:04:46 +00:00
Alan Saul
37127bf233 Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2014-11-03 11:55:06 +00:00
Alan Saul
625eedd6ac Catch nosetests import error if not installed, now ignore GPy.tests() when nosetests GPy is called, but allows GPy.tests() to be called, and throws error if this is tried without nose being installed 2014-11-03 11:54:55 +00:00
James Hensman
4905348dbe changed init for mcmc 2014-11-03 11:26:31 +00:00
Max Zwiessele
6b3888f163 [VarDTC] reverted SparseGP to previous state, updated BGPLVM accordingly 2014-11-03 11:16:34 +00:00
James Hensman
db6c50712e removing dead bayesopt file 2014-11-03 11:15:40 +00:00
James Hensman
d1200a1be7 moving mcmc 2014-11-03 10:55:13 +00:00
Max Zwiessele
70afcd3ddd Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2014-11-03 09:04:15 +00:00
Max Zwiessele
0fe50232a6 [ParameterizedTests] added test functionality 2014-10-31 17:12:31 +00:00
Max Zwiessele
4183b6665e [IndexOps] added new tests for index operations 2014-10-31 17:10:39 +00:00
Max Zwiessele
0080d4b044 [SparseGP] added self.full_values 2014-10-31 17:10:02 +00:00
Max Zwiessele
bfe8110c87 [MRD] changes for new inference technique 2014-10-31 17:09:14 +00:00
mschiegg
7bbb6c0f74 normalization: avoid division by zero for constant feature dimensions 2014-10-31 13:40:10 +01:00
James Hensman
91c409bac0 Merge branch 'devel' of github.com:sheffieldml/GPy into devel 2014-10-29 20:28:33 +00:00
James Hensman
85ed44c9da omp for dX 2014-10-29 20:28:23 +00:00
Max Zwiessele
79df23adc8 [ObsAr] do not make a copy, if not needed 2014-10-29 08:24:51 +00:00
Max Zwiessele
894829ffeb [var dtc missing] deleted code for missing data inference 2014-10-29 08:24:25 +00:00
Max Zwiessele
f916717aad [stochastics] updated some stuff on the stochastics 2014-10-29 08:23:57 +00:00
Max Zwiessele
af40ef8cfb [sparse gp] prediction with posterior per dimension activated 2014-10-29 08:23:25 +00:00
Max Zwiessele
f91e7e9deb [init] parameter updates now check if in init 2014-10-29 08:22:49 +00:00
Max Zwiessele
57e56bd93f [pickling] load added to gpy, allows for easy loading of pickled models 2014-10-29 08:22:11 +00:00
Max Zwiessele
aa50f1f303 [latent plotting] some adjustments for nicer looking plots 2014-10-29 08:21:37 +00:00
Max Zwiessele
236dfb505d [Laplace] sum now around argument, instead of call to array 2014-10-29 08:21:03 +00:00
James Hensman
f6f36234c6 indexing bugfix in weave 2014-10-22 16:43:30 +01:00
James Hensman
a87f76df4f Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2014-10-22 16:32:40 +01:00
Max Zwiessele
e98e10271b [ObsAr] added .values 2014-10-22 16:28:50 +01:00
James Hensman
65f408de9a merge 2014-10-22 16:22:38 +01:00
James Hensman
476d867f89 minor edits to regression examples 2014-10-22 16:21:05 +01:00
Max Zwiessele
c28ff38435 [transformations] natural gradient all in testphase 2014-10-22 15:52:24 +01:00
Max Zwiessele
6ea39bb74b [randomize] randomize now without init 2014-10-22 15:34:24 +01:00
Max Zwiessele
eadce0ca4f [stochastics] added doc 2014-10-22 15:31:52 +01:00
Max Zwiessele
37b19e6e7a [transformations] gradfactor change and Natural gradient transformations. not working fully, yet :( 2014-10-21 15:37:58 +01:00
Max Zwiessele
b94ebc2aa2 [sparse GP] fallback for other inference methods for missing_data 2014-10-17 17:32:51 +01:00
Max Zwiessele
ac224c0dbd [kernel slicing] active_dims can be a single integer now 2014-10-17 17:31:47 +01:00
Max Zwiessele
536adf0782 [classification] sparse gp inference for EPDTC 2014-10-17 17:30:48 +01:00
Max Zwiessele
5ac7b2c524 [pca] pca -> PCA 2014-10-17 11:45:04 +01:00
James Hensman
e12329c626 weave ObsArray bugfix 2014-10-17 11:18:31 +01:00
James Hensman
b8f2b20158 Merge branch 'devel' of github.com:sheffieldml/GPy into devel 2014-10-16 17:32:43 +01:00
James Hensman
d26beb215a numerical stability in variational expectations 2014-10-16 17:32:37 +01:00
Fariba
2d89fa821a merge the discriminative prior to devel 2014-10-16 17:21:33 +01:00