Commit graph

1707 commits

Author SHA1 Message Date
Max Zwiessele
6c60eef4bd biiig changes in tieing, and printing -> hirarchy now always shown 2013-11-11 17:46:33 +00:00
James Hensman
ed6a45fd9b minor edits, like spacing, spelling 2013-11-07 20:29:40 +00:00
Max Zwiessele
cb9056d729 added variational 2013-11-07 13:55:24 +00:00
Max Zwiessele
765ab41045 bgplvm integrated 2013-11-07 08:52:33 +00:00
Max Zwiessele
8c02e4af36 added BGPLVM in parameterized 2013-11-06 15:15:13 +00:00
Max Zwiessele
3316d29341 added gplbm and sparse gp to new parameterized structure 2013-11-06 11:40:54 +00:00
Max Zwiessele
c8eac84d55 Merge branch 'params' of github.com:SheffieldML/GPy into params 2013-11-06 08:59:32 +00:00
Max Zwiessele
1a6086546e updated scg messages 2013-11-06 08:59:25 +00:00
Max Zwiessele
6feb5dd2f1 adjusted parameters to report their changes 2013-11-03 13:58:15 +00:00
Max Zwiessele
067206e83e tutorial update and X observer 2013-10-28 09:14:56 +00:00
Max Zwiessele
d8151eee61 X caching is not yet done, parameter caching working fine. X cache must be adjusted to update at the right times 2013-10-27 17:04:46 +00:00
Max Zwiessele
d3721b76a8 changing all parameterized objects to be compatible with the new parameterization 2013-10-25 15:29:04 +01:00
Max Zwiessele
e1bee4536a adjusted gaussian likelihood to new parameterization 2013-10-22 16:18:04 +01:00
Max Zwiessele
5ab7303226 gp_base newly paramterized 2013-10-22 16:17:41 +01:00
Max Zwiessele
21dd82f8d9 updated white, bias and rbf to new parameter handling 2013-10-22 16:17:13 +01:00
Max Zwiessele
27724fd456 GPRegression working, gradients still todo 2013-10-22 16:16:54 +01:00
Max Zwiessele
9a70f27010 first adjustments to the model and gps -> updates and gradient transforms 2013-10-22 13:41:01 +01:00
Max Zwiessele
d12f055115 parameters have a update hirarchy, in which updates to parameters are hirarchically pursuit 2013-10-22 13:39:58 +01:00
Max Zwiessele
7f05dd4a43 likelihood is now parameterized 2013-10-22 13:38:46 +01:00
Max Zwiessele
e70203a1b2 kern is now parameterized 2013-10-22 13:38:33 +01:00
Max Zwiessele
fba121c826 kern is now parameterized 2013-10-22 13:38:29 +01:00
Max Zwiessele
d5afb3b797 parameters now work efficiently, tieing is iwth observer pattern 2013-10-18 16:20:01 +01:00
Max Zwiessele
6be05de791 still todo: untie, gradients, priors, print ties 2013-10-17 20:47:41 +01:00
Max Zwiessele
945f192ee2 parameter_testing has to be written new 2013-10-17 14:40:26 +01:00
Max Zwiessele
055eb3b70b starting to sort out likelihoods WARNING not working 2013-10-17 14:39:44 +01:00
Max Zwiessele
bc765134c0 make sure _init_ is not overriden 2013-10-17 14:37:39 +01:00
Max Zwiessele
95b07146ac WARNING: half way through commit, this is a non working middle thing! everything should be in place now, figure tieing and printing with broadcasting 2013-10-17 14:34:17 +01:00
Max Zwiessele
94d344db0b parameter indexing now linear in number of printed values 2013-10-16 21:08:35 +01:00
Max Zwiessele
be5081bd82 index ops now with own dict 2013-10-16 21:07:54 +01:00
Max Zwiessele
d132b42091 documentation added 2013-10-15 09:01:03 +01:00
Max Zwiessele
73f44ea0d8 more testing 2013-10-14 18:00:11 +01:00
Max Zwiessele
3a97eaf684 warning messages optional for re-constraining 2013-10-14 17:59:41 +01:00
Max Zwiessele
e0d7de9b3b indexing fixed, some equality testing 2013-10-14 17:58:37 +01:00
Max Zwiessele
41d256c984 parameter object done, printing fixed 2013-10-14 17:58:16 +01:00
Max Zwiessele
9c126d9b94 merged dimen reduction 2013-10-14 17:58:13 +01:00
James Hensman
c3de628e99 docstrinfs in kern.py 2013-10-14 17:11:39 +01:00
Neil Lawrence
fe30db1331 Updated sympy code, multioutput grad checks pass apart from wrt X. Similar problems with prediction as to sinc covariance, needs investigation. 2013-10-14 09:37:35 +01:00
Neil Lawrence
66daf2ad45 Merge branch 'devel' of https://github.com/SheffieldML/GPy into devel 2013-10-14 05:59:36 +01:00
Neil Lawrence
a92780cb89 Added olivetti faces data set. It required adding netpbmfile.py a bsd licensed pgm file reader from Christoph Gohlke, which doesn't seem to have a spearate installer. Also modified image_show to assume by default that array ordering is python instead of fortran. Modified brendan_faces demo to explicilty force fortran ordering. Notified Teo of change. 2013-10-14 05:59:15 +01:00
Nicolò Fusi
6945ad7aa1 Seems to work on windows now
not everything works yet, but I've identified the main issues. Still
TODO: handle missing OMP libraries gracefully
2013-10-11 16:19:27 -07:00
Max Zwiessele
2018368d8d domain and trtansformations namespace prettyfying 2013-10-11 17:26:04 +01:00
Max Zwiessele
780daac03e Merge branch 'devel' of github.com:SheffieldML/GPy into params 2013-10-11 16:52:54 +01:00
Max Zwiessele
4a155dba1e tests updated 2013-10-11 16:51:49 +01:00
Max Zwiessele
3132a0362a dim reduction examples Q= > input_dim= 2013-10-11 16:50:16 +01:00
Max Zwiessele
a9b190782d numpy non hashable AHHHHHH 2013-10-11 16:46:47 +01:00
Max Zwiessele
2355830398 dont print brackets in transformations 2013-10-11 16:46:12 +01:00
Max Zwiessele
152f61acf0 parameterized first beta test 2013-10-11 16:44:34 +01:00
Neil Lawrence
de0a5d0e70 Some fixes and changes to the sympykern. 2013-10-09 12:07:39 +01:00
Neil Lawrence
b2cea56c11 Merge branch 'devel' of https://github.com/SheffieldML/GPy into devel 2013-10-09 11:14:47 +01:00
Neil Lawrence
1a46026015 Fixed stick datasets bug ... but sympykern is currently in a rewrite so will be broken 2013-10-09 11:14:42 +01:00