Commit graph

1486 commits

Author SHA1 Message Date
Max Zwiessele
66167fb3e9 removed white kernel, bc of likelihood variance 2013-09-02 11:54:50 +01:00
Max Zwiessele
a11ce740f7 plotting adjusted 2013-09-02 11:54:08 +01:00
Max Zwiessele
57eda0b77c added print m and print m.all differentiation 2013-09-02 11:53:45 +01:00
Neil Lawrence
549f64892e Merge branch 'devel' of https://github.com/SheffieldML/GPy into devel 2013-08-29 19:57:37 +02:00
Neil Lawrence
bdc8ee45a7 Fixed gplvm unittest which was sampling an output matrix of size input_dim (and corresponding error in bcgplvm unittest which was based on it). 2013-08-29 19:57:25 +02:00
Neil Lawrence
128ebbabc5 Added mlp mapping (with possibility of having multiple layers). 2013-08-29 19:26:00 +02:00
Max Zwiessele
1979c7e69b Merge branch 'devel' of git@github.com:SheffieldML/GPy.git into devel 2013-08-29 15:21:36 +01:00
Max Zwiessele
3ea85c6fa6 merge dim reduction 2013-08-29 15:16:29 +01:00
Neil Lawrence
e6739788ea Added simple back constrained GPLVM model. 2013-08-28 14:22:21 +02:00
Neil Lawrence
c306636616 Added unit tests for mapping functions. 2013-08-28 13:56:00 +02:00
Neil Lawrence
d31b5a7c55 Implemented Mapping framework and associated linear and kernel mappings. This is needed for mean functions, back constrained GPLVM and the non-stationary Gibbs kernel. 2013-08-28 13:51:50 +02:00
Neil Lawrence
84b7156d23 Implemented MLP gradients with respect to X. 2013-08-28 01:19:43 +02:00
Neil Lawrence
b127c96bf2 Polynomial kernel gradients wrt X working. 2013-08-28 00:20:12 +02:00
Neil Lawrence
a61feb17a5 Changed default values of W and kappa for coregionalisation kernel. Changed names of keyword arguments from Nout and R to output_dim and rank. 2013-08-27 10:53:32 +02:00
Neil Lawrence
b83d99cb3c Merge branch 'devel' of https://github.com/SheffieldML/GPy into devel 2013-08-22 14:04:12 +02:00
Neil Lawrence
00a5f8e5f6 Added gpx dataset. 2013-08-22 14:03:59 +02:00
Neil Lawrence
7cd119d2b0 Added missing poly.py file. 2013-08-22 14:03:35 +02:00
James Hensman
e52dad80f3 Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2013-08-21 09:53:55 +01:00
James Hensman
65c0c72361 fixed target slicing bug in prod kernel 2013-08-21 09:53:49 +01:00
Neil Lawrence
65702c1448 Added models for testing kernel gradients in unit tests. 2013-08-20 19:38:12 +02:00
Neil Lawrence
c140b2118a Various doc string edits and consistency changes in comments. 2013-08-19 20:11:25 +02:00
Neil Lawrence
7bb7c0a08c Minor fixes 2013-08-19 08:51:58 +02:00
Neil Lawrence
95ebc1c5e9 Added notes file for issues raised while looking through code, some are things I need to raise on github, others need some informal discussion, but for the moment thought to put them informally here, given flakiness of internet connection. 2013-08-19 07:38:35 +02:00
Neil Lawrence
0380f52702 Minor fixes to classification to allow kernel choice, change of oil example to use full test set and full training set. 2013-08-19 07:37:09 +02:00
Neil Lawrence
2004cf3ea9 Minor fixes to regression example with robot_wireless. 2013-08-19 00:04:46 +02:00
Neil Lawrence
4082f6c02e Added robot_wireless data set and examples. 2013-08-18 23:46:02 +02:00
Neil Lawrence
c45a80499c Added ability to load in cmu motion capture data bases in the new data base loading format. 2013-08-18 08:18:27 +02:00
Neil Lawrence
791f499412 Finished first draft of system for downloading data sets. 2013-08-17 23:51:07 +02:00
Neil Lawrence
3f6c01898d Added first draft of polynomial kernel. 2013-08-17 09:07:09 +02:00
Neil Lawrence
a570198029 Added automatic computation of dKdiag_dtheta in kernpart.py using dK_dtheta. 2013-08-17 07:13:51 +01:00
Neil Lawrence
bba3dc5458 Added mlp covariance (x gradient not working) 2013-08-16 21:24:30 +01:00
Neil Lawrence
7aac769d37 Modifications to transformations ... not sure which tests to run to make sure I haven't messed things up. New code avoids exponentiating values greater than -log(eps) or less than log(eps). Also changed negative code to call the positive code (I think they should inherit the positive code ... but maybe not. 2013-08-16 18:28:16 +01:00
Alan Saul
9e0795afc4 Mocking matplotlib pyplot as readthedocs is failing to import it (again...) 2013-08-07 16:28:16 +01:00
Max Zwiessele
59139f01f0 Prodpart bugfix 2013-08-02 16:40:16 +01:00
Max Zwiessele
b54f614a2c linear kernel old implementation 2013-08-02 16:39:53 +01:00
Max Zwiessele
56b86542d4 better bound extimate for plot_latent background 2013-08-02 16:39:34 +01:00
Max Zwiessele
d66a8e02a5 visual? 2013-08-02 16:38:34 +01:00
Max Zwiessele
f690da943a changed psi0 of white to be zero 2013-08-02 16:37:50 +01:00
Max Zwiessele
5570e82943 constant jitter to Kmm, deleted some white kernels in models and examples 2013-08-02 16:36:51 +01:00
Max Zwiessele
1cc8f95717 Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2013-08-02 12:18:48 +01:00
Max Zwiessele
ede5654e3c input_sensitivity right way 2013-08-02 12:18:43 +01:00
Neil Lawrence
391f13c472 Added connections.txt 2013-08-02 12:14:29 +01:00
Andreas
dd75890f33 Implemented smart pickling for svigp 2013-07-30 17:54:22 +01:00
Alessandra Tosi
42af4d737f added plot of magnification factor 2013-07-30 15:58:59 +01:00
Alessandra Tosi
dc637e30cb added jacobian and magnification factor 2013-07-30 15:58:18 +01:00
James Hensman
632dda8397 oops, that was silly bug. Don't code tired, kids.
problem summing psi2 in sparse_GP
2013-07-30 11:43:07 +01:00
James Hensman
b9c9f5ac83 some profilng and debugging in sparse_GP 2013-07-30 10:17:40 +01:00
Max Zwiessele
504ffd0cf9 import handling... 2013-07-29 15:36:59 +01:00
Max Zwiessele
4f2dfb5e57 import handling... 2013-07-29 15:35:15 +01:00
Max Zwiessele
7d96266714 added imshow controller and label controller 2013-07-29 15:33:04 +01:00