Commit graph

3475 commits

Author SHA1 Message Date
Neil Lawrence
47cbdc265e Update __init__.py
Add inference to __init__.py
2015-01-21 08:15:52 +01:00
Neil Lawrence
8288240b7d Update hmc.py 2015-01-21 08:14:35 +01:00
Cristian Guarnizo
81c57140c4 Update __init__.py
Added EQ_ODE2.
2015-01-19 11:28:27 -05:00
Cristian Guarnizo
88f69312eb Create eq_ode2.py
Added ODE2 kernel for latent force models.
2015-01-19 11:27:07 -05:00
Max Zwiessele
57e941140c [opt] unified printing of status of optimization 2015-01-15 09:02:45 +00:00
Max Zwiessele
4deac0103c [transformations] bugfix for pickling 2015-01-15 09:02:22 +00:00
Max Zwiessele
7fbbdafdbf [opt] bugfix 2015-01-13 15:07:24 +00:00
Max Zwiessele
be3c8f5202 [verbose opt] messages would be overwritten when using ipython_notebooks, fixed 2015-01-13 14:29:28 +00:00
Max Zwiessele
07e85042ec [kern] added Fixed kern to import list in GPY.kern 2015-01-13 14:05:50 +00:00
Max Zwiessele
53dcd3f9fa [objective grads] undid the change, as this would lead to dramatic problems in reloading old models using the pickle module 2015-01-13 13:53:28 +00:00
Max Zwiessele
20eff02061 [objective grads] undid the change, as this would lead to dramatic problems in reloading old models using the pickle module 2015-01-13 13:46:49 +00:00
Max Zwiessele
17f42768da [progress] show progress of optimization using optimize(itpython_notebook=True) 2015-01-13 11:57:14 +00:00
Max Zwiessele
1c6cef44b6 [progress] show progress of optimization using optimize(itpython_notebook=True) 2015-01-13 11:49:40 +00:00
Max Zwiessele
b9b6ce91d8 [updates] now handled in observable, should have from the begining :/ 2015-01-13 09:45:11 +00:00
Max Zwiessele
cd8dd9ab98 [optimization prints] unified printouts for optimizers, added ipython_notebook flag for use in ipython notebooks 2015-01-12 15:43:33 +00:00
Max Zwiessele
869a5c4f92 [parent notification] is now priority -1000, instead of -inf 2015-01-12 13:17:34 +00:00
Max Zwiessele
e03d6d4f71 [model print] updates now shown in print out 2015-01-12 11:55:44 +00:00
Max Zwiessele
3aedf63966 [natural gradients] added natural gradients, usable but not analysed 2015-01-12 11:36:53 +00:00
Max Zwiessele
dff577d22b renamed opimizer methods to unobscure gradients and objective 2015-01-12 11:35:57 +00:00
Max Zwiessele
ec42011617 [parameterized] print outs for ipython notebook 2015-01-12 11:33:31 +00:00
Alan Saul
1b27337e7c SVI now working with minibatches 2014-12-22 15:40:49 +00:00
Alan Saul
a8b0d60c3e SVI now implemented without natural natural gradients or batches 2014-12-22 13:35:56 +00:00
James Hensman
b642360ede multi-outputted the svgp inference (buggy, probably) 2014-12-22 12:07:51 +00:00
Alan Saul
7ba2e2ed08 Added svgp in partially broken state ready for multiouputs 2014-12-22 12:00:16 +00:00
Alan Saul
935f2016db Fixed quadrature for bernoulli likelihood, started adding Gaussian likelihood derivatives for quadrature 2014-12-19 17:53:32 +00:00
James Hensman
2de2217473 svgp inference added -- not working yet 2014-12-19 16:48:40 +00:00
Max Zwiessele
35a33f94e8 [html print] more table based corrections for html printing 2014-12-05 16:23:50 +00:00
Max Zwiessele
f2127e17cb Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2014-12-05 11:13:21 +00:00
Max Zwiessele
0e0220921f [html repr] included css styling for html print outs 2014-12-05 11:13:18 +00:00
Zhenwen Dai
1da44d9d5c implement update_gradients_diag for MLP kernel 2014-12-04 14:22:58 +00:00
Max Zwiessele
4fc006f45d [vardtc] sparse gplvm in bayesian gplvm minibatch 2014-12-03 08:35:41 +00:00
Max Zwiessele
865d8e3851 [vardtc] predict with uncertain inputs, the non principled way 2014-12-03 08:34:11 +00:00
Max Zwiessele
d554b1a442 [natgrad] taking the gradient in the old direction, without adjustment 2014-12-03 08:33:33 +00:00
Max Zwiessele
4e91a012e6 [model] update messages a little nicer 2014-11-28 10:11:58 +00:00
Max Zwiessele
45ede97d85 [stationary] lengthscales will be scaled by variance now 2014-11-28 10:10:52 +00:00
Max Zwiessele
be40307597 [Updateable] deprecated updates 2014-11-28 10:10:13 +00:00
Max Zwiessele
3b729edc3b [setup] new version number, to avoid confusion. This will be the next minor update, including changes to README and bugfixes 2014-11-28 08:54:06 +00:00
James Hensman
1c65e23c18 Update README.md 2014-11-21 18:00:28 +00:00
James Hensman
b0c0334359 Update README.md 2014-11-21 17:59:01 +00:00
James Hensman
e148daecd7 Update README.md 2014-11-21 17:48:40 +00:00
Alan Saul
34932f8746 Huge merge correcting upstream master 2014-11-21 16:49:33 +00:00
Max Zwiessele
acd9b4b2f8 Merge branch 'devel' 2014-11-21 16:42:34 +00:00
Max Zwiessele
187f85c239 [huge merge] the second 2014-11-21 16:42:01 +00:00
Max Zwiessele
180650ec85 [huge merge] trying to merge old master and master 2014-11-21 16:17:03 +00:00
James Hensman
7d0d5fd9b8 Merge branch 'devel' of github.com:/sheffieldml/GPy into devel 2014-11-21 15:44:21 +00:00
James Hensman
ca0c4f55e1 removed more sgd 2014-11-21 15:44:14 +00:00
Alan Saul
39e394c015 Another attempt by installing a mini version of anaconda, should be easier to maintain 2014-11-21 15:32:59 +00:00
Alan Saul
7a525df3ac Attempting to fix travis build 2014-11-21 15:21:13 +00:00
James Hensman
4fd05439fc small random perturbations in kernel tests helps with the symmetry gradcheck bug 2014-11-21 12:28:04 +00:00
James Hensman
d7620594be more cooooooopyrighting 2014-11-21 12:16:58 +00:00