* Bump setup.py versions for 1.1 * PoC MCP server (#419) * Very initial MCP server PoC for TrustGraph * Put service on port 8000 * Add MCP container and packages to buildout * Update docs for API/CLI changes in 1.0 (#421) * Update some API basics for the 0.23/1.0 API change * Add MCP container push (#425) * Add command args to the MCP server (#426) * Host and port parameters * Added websocket arg * More docs * MCP client support (#427) - MCP client service - Tool request/response schema - API gateway support for mcp-tool - Message translation for tool request & response - Make mcp-tool using configuration service for information about where the MCP services are. * Feature/react call mcp (#428) Key Features - MCP Tool Integration: Added core MCP tool support with ToolClientSpec and ToolClient classes - API Enhancement: New mcp_tool method for flow-specific tool invocation - CLI Tooling: New tg-invoke-mcp-tool command for testing MCP integration - React Agent Enhancement: Fixed and improved multi-tool invocation capabilities - Tool Management: Enhanced CLI for tool configuration and management Changes - Added MCP tool invocation to API with flow-specific integration - Implemented ToolClientSpec and ToolClient for tool call handling - Updated agent-manager-react to invoke MCP tools with configurable types - Enhanced CLI with new commands and improved help text - Added comprehensive documentation for new CLI commands - Improved tool configuration management Testing - Added tg-invoke-mcp-tool CLI command for isolated MCP integration testing - Enhanced agent capability to invoke multiple tools simultaneously * Test suite executed from CI pipeline (#433) * Test strategy & test cases * Unit tests * Integration tests * Extending test coverage (#434) * Contract tests * Testing embeedings * Agent unit tests * Knowledge pipeline tests * Turn on contract tests * Increase storage test coverage (#435) * Fixing storage and adding tests * PR pipeline only runs quick tests * Empty configuration is returned as empty list, previously was not in response (#436) * Update config util to take files as well as command-line text (#437) * Updated CLI invocation and config model for tools and mcp (#438) * Updated CLI invocation and config model for tools and mcp * CLI anomalies * Tweaked the MCP tool implementation for new model * Update agent implementation to match the new model * Fix agent tools, now all tested * Fixed integration tests * Fix MCP delete tool params * Update Python deps to 1.2 * Update to enable knowledge extraction using the agent framework (#439) * Implement KG extraction agent (kg-extract-agent) * Using ReAct framework (agent-manager-react) * ReAct manager had an issue when emitting JSON, which conflicts which ReAct manager's own JSON messages, so refactored ReAct manager to use traditional ReAct messages, non-JSON structure. * Minor refactor to take the prompt template client out of prompt-template so it can be more readily used by other modules. kg-extract-agent uses this framework. * Migrate from setup.py to pyproject.toml (#440) * Converted setup.py to pyproject.toml * Modern package infrastructure as recommended by py docs * Install missing build deps (#441) * Install missing build deps (#442) * Implement logging strategy (#444) * Logging strategy and convert all prints() to logging invocations * Fix/startup failure (#445) * Fix loggin startup problems * Fix logging startup problems (#446) * Fix logging startup problems (#447) * Fixed Mistral OCR to use current API (#448) * Fixed Mistral OCR to use current API * Added PDF decoder tests * Fix Mistral OCR ident to be standard pdf-decoder (#450) * Fix Mistral OCR ident to be standard pdf-decoder * Correct test * Schema structure refactor (#451) * Write schema refactor spec * Implemented schema refactor spec * Structure data mvp (#452) * Structured data tech spec * Architecture principles * New schemas * Updated schemas and specs * Object extractor * Add .coveragerc * New tests * Cassandra object storage * Trying to object extraction working, issues exist * Validate librarian collection (#453) * Fix token chunker, broken API invocation (#454) * Fix token chunker, broken API invocation (#455) * Knowledge load utility CLI (#456) * Knowledge loader * More tests
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TrustGraph Logging Strategy
Overview
TrustGraph uses Python's built-in logging module for all logging operations. This provides a standardized, flexible approach to logging across all components of the system.
Default Configuration
Logging Level
- Default Level:
INFO - Debug Mode:
DEBUG(enabled via command-line argument) - Production:
WARNINGorERRORas appropriate
Output Destination
All logs should be written to standard output (stdout) to ensure compatibility with containerized environments and log aggregation systems.
Implementation Guidelines
1. Logger Initialization
Each module should create its own logger using the module's __name__:
import logging
logger = logging.getLogger(__name__)
2. Centralized Configuration
The logging configuration should be centralized in async_processor.py (or a dedicated logging configuration module) since it's inherited by much of the codebase:
import logging
import argparse
def setup_logging(log_level='INFO'):
"""Configure logging for the entire application"""
logging.basicConfig(
level=getattr(logging, log_level.upper()),
format='%(asctime)s - %(name)s - %(levelname)s - %(message)s',
handlers=[logging.StreamHandler()]
)
def parse_args():
parser = argparse.ArgumentParser()
parser.add_argument(
'--log-level',
default='INFO',
choices=['DEBUG', 'INFO', 'WARNING', 'ERROR', 'CRITICAL'],
help='Set the logging level (default: INFO)'
)
return parser.parse_args()
# In main execution
if __name__ == '__main__':
args = parse_args()
setup_logging(args.log_level)
3. Logging Best Practices
Log Levels Usage
- DEBUG: Detailed information for diagnosing problems (variable values, function entry/exit)
- INFO: General informational messages (service started, configuration loaded, processing milestones)
- WARNING: Warning messages for potentially harmful situations (deprecated features, recoverable errors)
- ERROR: Error messages for serious problems (failed operations, exceptions)
- CRITICAL: Critical messages for system failures requiring immediate attention
Message Format
# Good - includes context
logger.info(f"Processing document: {doc_id}, size: {doc_size} bytes")
logger.error(f"Failed to connect to database: {error}", exc_info=True)
# Avoid - lacks context
logger.info("Processing document")
logger.error("Connection failed")
Performance Considerations
# Use lazy formatting for expensive operations
logger.debug("Expensive operation result: %s", expensive_function())
# Check log level for very expensive debug operations
if logger.isEnabledFor(logging.DEBUG):
debug_data = compute_expensive_debug_info()
logger.debug(f"Debug data: {debug_data}")
4. Structured Logging
For complex data, use structured logging:
logger.info("Request processed", extra={
'request_id': request_id,
'duration_ms': duration,
'status_code': status_code,
'user_id': user_id
})
5. Exception Logging
Always include stack traces for exceptions:
try:
process_data()
except Exception as e:
logger.error(f"Failed to process data: {e}", exc_info=True)
raise
6. Async Logging Considerations
For async code, ensure thread-safe logging:
import asyncio
import logging
async def async_operation():
logger = logging.getLogger(__name__)
logger.info(f"Starting async operation in task: {asyncio.current_task().get_name()}")
Environment Variables
Support environment-based configuration as a fallback:
import os
log_level = os.environ.get('TRUSTGRAPH_LOG_LEVEL', 'INFO')
Testing
During tests, consider using a different logging configuration:
# In test setup
logging.getLogger().setLevel(logging.WARNING) # Reduce noise during tests
Monitoring Integration
Ensure log format is compatible with monitoring tools:
- Include timestamps in ISO format
- Use consistent field names
- Include correlation IDs where applicable
- Structure logs for easy parsing (JSON format for production)
Security Considerations
- Never log sensitive information (passwords, API keys, personal data)
- Sanitize user input before logging
- Use placeholders for sensitive fields:
user_id=****1234
Migration Path
For existing code using print statements:
- Replace
print()with appropriate logger calls - Choose appropriate log levels based on message importance
- Add context to make logs more useful
- Test logging output at different levels