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54 commits
| Author | SHA1 | Message | Date | |
|---|---|---|---|---|
aaltshuler
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65160cc060 |
docs(rfc): aliases are bindings, not content — the ratified alias model
RFC-007 §D2 gains the model the alias design reasoned through: stored queries are content + its canonical team-owned name; legacy omnigraph.yaml aliases conflate a personal name with a local-file content pointer (the muddle RFC-008 retires); operator aliases are pure bindings (server, graph, stored-query NAME, arg mapping, defaults) — an alias that carries content competes with the catalog, one that references a name composes with it. The three senses of 'global' are resolved explicitly: cross-graph globality is strengthened (one $HOME file vs per-directory), team-shared shorthand is deliberately NOT an alias mechanism (the shared name IS the catalog name), cross-machine follows the dotfile. Collision rule: legacy wins during the RFC-008 window, with a warning. RFC-008's migration row for aliases sharpens accordingly: a legacy alias splits — content to the catalog (via cluster apply), binding to the operator layer; config migrate proposes both halves. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com> |
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aaltshuler
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a819ab500e |
feat(cli): keyed credentials — servers:, the token chain, login/logout (RFC-007 PR 2)
The operator config gains servers: (name -> url; never a token). A remote command whose URL prefix-matches an operator server resolves its bearer token through the keyed chain first — OMNIGRAPH_TOKEN_<NAME> env, then the [<name>] section of ~/.omnigraph/credentials (created 0600 via temp+rename, #139 finding 7; group/world-readable files refused loudly) — falling through to the legacy chain unchanged. URL keying makes §D5 rule 3 structural: a token is only ever sent to the server it is keyed to. Longest-prefix matching with a path-boundary check (http://h:8080 never matches http://h:8080-evil). Inserting the keyed hop above the legacy chain is safe by construction — no existing setup can have servers: defined. omnigraph login <name> stores/rotates one section (token from --token or one stdin line — the pipe flow keeps secrets out of shell history); omnigraph logout removes it, idempotently; logging in before declaring the server warns instead of failing (the gh model). Coverage: URL-match/no-substring-trap, credentials round-trip preserving sibling sections, 0600 write + over-permissive refusal, env-name mapping; the legacy resolve test is now hermetic against a real ~/.omnigraph and asserts byte-identical legacy behavior with no servers defined; one spawned-binary e2e walks the whole lifecycle against an authed server: refusal -> wrong-token login (stdin) -> rotate (--token) -> authorized read -> env-beats-file -> non-matching-URL negative -> logout revokes. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com> |
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aaltshuler
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08ce8dc34d |
docs(rfc): align RFC-007 with RFC-008's two-surface architecture
RFC-007 now speaks the end-state language throughout: the operator surface is one half of the two-surface split (cluster config / operator config), not a layer over a living omnigraph.yaml. The precedence cascade drops the project layer (cluster config carries no operator-resolvable keys — a checkout can never supply identity); legacy omnigraph.yaml appears only as the RFC-008 deprecation-window slot. The trust boundary is restated as closed-by-construction in the end state, with the rules governing the window. PR 3 becomes operator targeting (--server + operator aliases — the replacement RFC-008 needs before legacy aliases migrate), and the schema example gains the aliases block. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com> |
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aaltshuler
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320311e759 |
docs(rfc): RFC-008 — deprecate omnigraph.yaml, one concern per config surface
The file is three unrelated concerns wearing one filename — server deployment config, project/CLI conveniences, operator identity — and the mixture is the root cause of a recurring problem class (per-operator copies of project files, checkout-supplied credential redirection, init scaffold pollution). End state: two single-owner surfaces — cluster config (team, repo) and operator config (person, $HOME) — plus the zero-config flags/env tier. Complete key-by-key migration map over the verified OmnigraphConfig surface; staged retirement per the repo's Hyrum rules (warn with per-key guidance -> `config migrate` tool -> stop scaffolding -> opt-in strict -> removal at the next major). RFC-007's project-layer framing is amended to transitional accordingly. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com> |
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aaltshuler
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d531f60999 |
docs(rfc): RFC-007 — per-operator config, the operator slice of RFC-002
Terraform-style operator/project split: ~/.omnigraph/config.yaml for identity (operator.actor in the --as cascade), credentials keyed by server name (env -> 0600 credentials file; no inline secrets), and operator-owned named servers that project configs reference but cannot redefine. Explicitly a staged subset of RFC-002: adopts its settled decisions (one dir, keyed credentials, env precedence), defers GraphLocator/use/state-layer, and encodes the ten confirmed PR #139 findings as design rules (compat shims, key-level merges, atomic writes, the project-layer trust boundary). Co-Authored-By: Claude Fable 5 <noreply@anthropic.com> |
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aaltshuler
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8d7aed065f |
test(cluster,server): gated object-storage cluster e2e + CI wiring + docs
s3_cluster.rs runs the full control-plane lifecycle against a real bucket (CI: containerized RustFS; locally the RustFS binary): import → lock released (pins the drop-time release regression caught on the first live smoke) → apply (graph roots + catalog on the bucket, nothing local) → serving snapshots from both the config dir and the bare URI → schema evolution → approved delete (prefix removal) → empty-cluster refusal. The server suite gains the config-free boot test: --cluster s3://… with zero local files serves a stored query over HTTP. CI: the rustfs job runs both suites; the classify filter covers the cluster store/serve modules and the new test files. The server smoke drops its name filter — every test in the s3 target is bucket-gated, and a filter matching nothing passes vacuously (which silently ran zero tests for a while). Docs: deployment.md gains the Bucket-no-volume shape as the preferred cloud deployment; cluster.md/server.md document --cluster <uri>; testing.md maps the new suite. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com> |
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aaltshuler
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8dc2f15255 |
feat(cluster): the storage: root — state, catalog, and graph roots relocatable
cluster.yaml gains an optional storage: URI deciding where everything the cluster STORES lives: the state ledger, lock, content-addressed catalog, recovery sidecars, approval artifacts, and the derived graph roots (<storage>/graphs/<id>.omni). Absent, it defaults to the config directory itself — the original layout, byte-compatible, so pre-existing clusters and the whole test suite are untouched. Declared configuration always stays in the working tree (Terraform's config-local/state-remote split); credentials are env-only, never in cluster.yaml. Every command resolves its store from the declared root (a bad root is a loud invalid_storage_root). Graph-root derivation, the delete executor (prefix delete via the adapter), the sweep's existence probes, the catalog payload write/verify/read paths, and the serving snapshot all flow through ClusterStore — the last raw-fs holdouts for stored state are gone, and the deny-list gains the rule that keeps it that way. Tests: default-layout byte-compat, a file:// root relocating the entire cluster (ledger+catalog+graphs under the new root, nothing under the config dir, serving snapshot follows), invalid-root validation. 98 in-crate + 9 failpoints + full workspace gate green. The s3:// flavor lands with PR 3's gated RustFS e2e. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com> |
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aaltshuler
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fa6af775c1 |
feat(cli)!: unified load command; deprecate ingest as an alias
omnigraph load is now the single data-write command: - works against remote graphs (POSTs the server's /ingest endpoint with the same bearer/actor resolution as other remote commands) — previously load was the only data command forced to open Lance storage directly - --from <base> opts into fork-if-missing for --branch (the former ingest semantics); without --from a missing branch is an error, never a fork - --mode is now required: overwrite is destructive, so there is no implicit default (the old silent default was overwrite) - output gains base_branch/branch_created (and table sums on remote loads) omnigraph ingest stays as a deprecated alias (defaults preserved: --from main --mode merge) that prints a one-line warning to stderr, matching the read/change deprecation convention; removal in a later release. Docs updated in the same change: cli.md, cli-reference.md, policy.md, audit.md, execution.md (unified load section), AGENTS.md quick-flow, README.md. BREAKING CHANGE: scripts running omnigraph load without --mode must now pass it explicitly (previously defaulted to the destructive overwrite). Co-Authored-By: Claude Fable 5 <noreply@anthropic.com> |
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aaltshuler
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43d4e89fde |
docs(execution): Overwrite loads are staged since MR-793, not inline-commit
The LoadMode table still described Overwrite as an inline-commit-per-type residual with a partial-truncation failure window. Since MR-793 Phase 2, Overwrite goes through the same MutationStaging accumulator as Append/Merge, staged as a Lance Operation::Overwrite transaction via stage_overwrite (table_store.rs) and committed with commit_staged + publisher CAS — a mid-load failure leaves Lance HEAD untouched in all three modes. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com> |
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aaltshuler
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d8354ac213 |
test(cli): address review — assert schema-show success, document exit-code stance, add e2e opt-out
- The drift-heal verification now asserts `schema show` succeeded and produced a schema before checking the rogue field's absence (a failed command previously made the negative assertion vacuously pass). - cluster_cli documents why it deliberately does not assert exit codes (blocked applies exit non-zero by contract while emitting the structured output callers assert on). - The comprehensive lifecycle e2es honor OMNIGRAPH_SKIP_SYSTEM_E2E=1 (graceful skip-with-message, the S3-gate pattern) for constrained sandboxes; requirements + suppression documented in testing.md. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com> |
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aaltshuler
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7d70811df1 |
test(cli): comprehensive full-cycle cluster e2e with a live server
Two system tests composing the whole Phase 1-5 surface with real binaries: - local_cluster_full_lifecycle_declare_serve_evolve_delete: declare two graphs -> one apply creates and converges them -> the --cluster server serves both stored queries -> schema+query evolve in one apply (migration previewed in plan) -> restart serves the new shape -> out-of-band schema drift observed by refresh and converged back by apply (rogue field soft-dropped) -> approved graph delete -> restart serves the survivor and 404s the tombstoned graph -> final plan empty. Catches composition regressions where each stage passes its own tests but the lifecycle breaks (the composite_flow.rs principle at the control-plane level). - local_cluster_serving_enforces_applied_policy_bindings: applied policy bundles gate serving per their bindings over HTTP with bearer-resolved actors — the cluster-bound bundle owns graph_list (admin 200, reader 403, anonymous 401), the graph-bound bundle owns invoke_query (reader gets rows; denied invocation is the documented anti-probing 404). Co-Authored-By: Claude Fable 5 <noreply@anthropic.com> |
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aaltshuler
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711865e6f1 |
docs(cluster,server): the Phase 5 mode switch; retire applied-not-serving caveats
The standing caveat ('applied means recorded in the cluster catalog —
nothing more; the server still boots from omnigraph.yaml') retires: cluster
docs gain the 'Serving from the cluster' section (exclusivity, applied-
revision serving, fail-fast readiness, restart-to-pick-up, expose-all
bridge), server.md gains mode-inference rule 0 and the cluster-booted multi
mode, deployment.md the boot-source choice, and the CLI's apply note plus
the cli-reference cluster row (stale back to Stage 3A) now describe the full
convergence surface. RFC-005 flips to Landed with four implementation
deviations recorded.
Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
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aaltshuler
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6c98560dde |
docs(cluster): document policy binding metadata (5A)
Co-Authored-By: Claude Fable 5 <noreply@anthropic.com> |
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Andrew Altshuler
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3e8f103804
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docs(cluster): RFC-005 — server boots from cluster state (Phase 5 design) (#174)
The axiom-15 mode switch: omnigraph-server --cluster <dir> (mutually exclusive with uri/--target/--config, zero omnigraph.yaml reads) serves the APPLIED revision — graph set from state, query/policy content from the content-addressed catalog at applied digests, cluster-scoped policy bundles as the server-level Cedar engine. The load-bearing finding: state is not yet serving-sufficient (policy applies_to bindings live only in cluster.yaml), so slice 5A records binding metadata into the applied revision at apply time — without it, boot-from-state silently becomes the merged read axiom 15 forbids. Fail-fast readiness table (missing state, pending sidecars, missing blobs, unbound policies all refuse boot with remedies), the expose-all mcp.expose bridge with its Phase 6 sunset, the operator migration path (exit criterion 7), and 5A/5B/5C sequencing. The existing boot pipeline (GraphStartupConfig -> registry -> routing/auth) is reused as-is — a new source, not a new pipeline. Co-authored-by: Claude Fable 5 <noreply@anthropic.com> |
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Andrew Altshuler
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61da7bf406
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docs(cluster): descope ETL pipelines to a separate project; keep the socket (#172)
Pipelines (scheduler, connectors, mapping, idempotency, run ledger) leave the cluster control-plane rollout and become their own project with their own RFC. This rollout guarantees only the socket, all of which already exists and is enforced: the pipelines: config field is reserved (typed future_phase_field rejection, test-covered), the pipeline.<name> typed address and Pipeline resource kind are reserved in the resource model, and axiom 13 fixes the contract any future implementation must satisfy (definition reconciled, execution data-plane, fan-out statusful). The ETL section in the high-level spec stands as the requirements record for that project; exit criterion 9 defers to its RFC. Co-authored-by: Claude Fable 5 <noreply@anthropic.com> |
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aaltshuler
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c949a2b717 |
docs(cluster): document Stage 4C — Phase 4 complete
Approvals + gated graph deletion in the user docs, the approve command in the CLI reference, RFC-004 flipped to Landed with its three implementation deviations recorded (row-8 retire-and-repropose, --as instead of --actor/--by, consumed artifacts rewritten in place rather than moved). Co-Authored-By: Claude Fable 5 <noreply@anthropic.com> |
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aaltshuler
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f217352c93 |
docs(cluster): document Stage 4B schema apply
Co-Authored-By: Claude Fable 5 <noreply@anthropic.com> |
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aaltshuler
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cb6c67f196 |
docs(cluster): document Stage 4A graph create
Co-Authored-By: Claude Fable 5 <noreply@anthropic.com> |
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Andrew Altshuler
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26b26999fd
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ci(codeowners): aaltshuler owns all paths; remove ragnorc (#169)
Engineering and docs roles both resolve to @aaltshuler; every path (catch-all, crates/**, docs/**, repo-level docs) now requires their review. CODEOWNERS and the doc tables regenerated from codeowners-roles.yml via render-codeowners.py. Co-authored-by: Claude Fable 5 <noreply@anthropic.com> |
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Andrew Altshuler
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58c66a54a2
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docs(cluster): RFC-004 — graph & schema apply design (Phase 4) (#168)
* docs(cluster): RFC-004 — graph & schema apply design (Phase 4)
The design the implementation spec's exit criteria require before
graph-moving cluster apply ships. Core positions:
- Cluster recovery is roll-forward-only: the engine's own sidecars make every
graph-level operation atomic within the graph, so the cluster never rolls a
graph back — its sidecars (__cluster/recoveries/{ulid}.json) classify and
record, converging the ledger to observable reality (axiom 5) or surfacing
a loud pending-repair condition. Eight-row decision matrix, every row
testable with the Stage 3B failpoint harness.
- Irreversible operations (graph delete, allow_data_loss schema apply)
consume digest-bound approval artifacts written by a new cluster approve
command and retired into state.approval_records (axiom 11). A stale
approval can never authorize a different change.
- cluster apply gains an actor, threaded to apply_schema_as so engine Cedar
enforcement and commit attribution work unchanged; the cluster adds no
policy engine of its own.
- Deterministic ordering (creates -> schema applies -> catalog -> deletes),
per-resource apply groups, cross-graph atomicity explicitly not promised.
- Staged 4A graph create / 4B schema apply / 4C graph delete, each gated on
per-matrix-row failpoint tests.
Answers exit criteria 2 and 4 fully, 1/5/6 partially; 3/7/8/9 deferred to
their phases (coverage table in the RFC). Linked from the dev index and the
implementation spec's Phase 4 section.
Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
* docs(cluster): RFC-004 review fixes — graph_delete sweep rows, state_cas_base contract
Two greptile findings: (1) D3 row 2 could not be evaluated for graph_delete
(no manifest to version-check after prefix removal) and 'root absent, state
already tombstoned' fell into the stale row — split into rows 7 (delete's
analog of row 2) and 7b (the roll-forward), with expected_manifest_version
documented as always null for the delete kind. (2) state_cas_base is now
explicitly audit/diagnostics-only — the sweep never consults it; independent
state mutations are handled by the ordinary CAS like any concurrent write.
Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
---------
Co-authored-by: Claude Fable 5 <noreply@anthropic.com>
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aaltshuler
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50543a8ce0 |
docs(cluster): record Stage 3B failpoint + verification coverage
Co-Authored-By: Claude Fable 5 <noreply@anthropic.com> |
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Andrew Altshuler
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b6d228ff54
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test(cli): cluster e2e hardening — lost-state recovery, out-of-band drift, root destruction, multi-graph convergence (#166)
Four lifecycle compositions over the spawned binary that pin spec claims no single-command test proves: - Lost ledger: delete state.json -> re-import from the live graph -> re-apply converges onto the same content-addressed blobs (axiom 5's reconstructable- state resilience edge, end to end). - Out-of-band schema apply (the Sarah/Bob violation): refresh marks graph/schema Drifted with schema_mismatch, status and plan surface it, and cluster apply refuses to silently correct it — state keeps the LIVE schema digest (drift correction is gated, axiom 8). - Destroyed graph root: refresh records graph_missing drift and drops graph/schema digests while preserving query/policy; plan proposes deferred creates only; apply moves nothing and the catalog stays intact. - Two graphs (one live, one not yet created) + a graph-spanning policy + a cluster-scoped policy: a single apply yields all four dispositions at once (applied/derived/deferred/blocked, deterministically ordered), then the second graph appears, refresh observes it, and apply converges. Helpers: init_named_cluster_graph generalizes init_cluster_derived_graph; write_multi_graph_cluster_fixture builds the two-graph config. Co-authored-by: Claude Fable 5 <noreply@anthropic.com> |
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aaltshuler
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69b63c33ac | Merge remote-tracking branch 'origin/main' into feat/cluster-apply-stage3a | ||
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Andrew Altshuler
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cec65b8ef8
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docs(cluster): axiom 15 — single ownership, mode-switch migration, per-operator layer (#164)
Encode the omnigraph.yaml ↔ cluster.yaml coexistence rules that were implicit across the specs: - cluster-axioms.md: new axiom 15 — every fact has exactly one owner at a time; coexistence is a mode switch, never a merge; omnigraph.yaml's job description shrinks to the permanent per-operator layer. Added review-tension bullet. - cluster-config-specs.md: "Migration model" subsection (three coexistence windows: no-conflict, Phase-5 mode switch, bridges-with-sunsets) and a "per-operator layer" completeness table (connection, credential reference, active context, ergonomics, personal aliases) with its global-config-dir destination per the RFC-002 direction. - cluster-config-implementation-spec.md: Compatibility Stance #7–#9 (single ownership, shrinking role, bridges carry sunsets); Phase 5 boot is an exclusive XOR mode switch; fixed the duplicated recoveries/recovery dirs in the Phase-1 storage layout. - docs/user/cluster-config.md: "Relationship to omnigraph.yaml" section in current-reality terms (cluster catalog is inspectable, not live). Co-authored-by: Claude Fable 5 <noreply@anthropic.com> |
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devin-ai-integration[bot]
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2c578a60b2
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(feat) convert engine call sites to &dyn TableStorage; demote legacy TableStore methods to pub(crate) (#86)
* MR-854: convert engine call sites to &dyn TableStorage; demote legacy methods
Phase 1b: every db.table_store.X(...) call site converts to
db.storage().X(...), reaching the storage layer through the sealed
TableStorage trait (returns &dyn TableStorage). Opaque SnapshotHandle
and StagedHandle replace bare lance::Dataset and Transaction in the
threaded values.
Phase 9: the inherent inline-commit methods on TableStore
(append_batch, merge_insert_batch{,es}, overwrite_batch,
create_btree_index, create_inverted_index) demote from pub to
pub(crate). Their only remaining direct users are table_store.rs
itself and the bulk loader's LoadMode::{Append, Overwrite, Merge}
concurrent fast-paths in loader::write_batch_to_dataset (no
two-phase shape in Lance 4.0.0 — closes after lance#6658 and #6666).
Docs:
- invariants.md \u00a7VI.23: drop "at the writer-trait surface"
qualifier; staged primitives are now the only engine surface.
- runs.md: residual matrix shrinks to delete_where and
create_vector_index (the two upstream-blocked residuals).
- forbidden_apis.rs: replace transitional language with the
current allow-list shape (table_store.rs + loader concurrent
fast-path only).
Files touched:
- changes/mod.rs, db/omnigraph.rs (+export/optimize/schema_apply/
table_ops.rs), exec/{merge,mod,mutation,staging}.rs,
loader/mod.rs, storage_layer.rs, table_store.rs,
tests/forbidden_apis.rs, docs/{invariants,runs}.md.
Co-Authored-By: Ragnor Comerford <ragnor.comerford@gmail.com>
* MR-854: replace test-only inline-commit append callers with local Lance helpers
After demoting TableStore::append_batch from pub to pub(crate), the
integration tests in tests/recovery.rs and tests/staged_writes.rs
that previously called store.append_batch(...) directly to simulate
HEAD-ahead-of-manifest drift can no longer access the inherent
method. Replace those calls with small in-test helpers that do a raw
Dataset::append (the same body the inherent method runs).
- tests/helpers/mod.rs gains lance_append_inline (shared helper).
- tests/staged_writes.rs gets a file-local lance_append_inline_local
(staged_writes.rs does not import helpers::).
- tests/recovery.rs drops the unused TableStore import in the one
function whose store binding became unused after the conversion.
Co-Authored-By: Ragnor Comerford <ragnor.comerford@gmail.com>
* MR-854: retrigger CI for flaky Test Workspace job
Co-Authored-By: Ragnor Comerford <ragnor.comerford@gmail.com>
* MR-854: convert remaining table_store call sites in export.rs / read_blob
Two leftover `self.table_store.X` / `db.table_store.X` call sites were
missed in the initial sweep — flagged by Devin Review on PR #86. Both
now go through the trait surface:
- `entity_from_snapshot` (db/omnigraph/export.rs): switch from
`db.table_store.open_snapshot_table` + `db.table_store.scan` to
`db.storage().open_snapshot_at_table` + `db.storage().scan`.
- `read_blob` (db/omnigraph.rs): replace
`snapshot.open(table_key)` + `self.table_store.first_row_id_for_filter`
with `self.storage().open_snapshot_at_table` +
`self.storage().first_row_id_for_filter`. The follow-up
`take_blobs` call still needs an `Arc<Dataset>` (it's a Lance blob
accessor not surfaced through the trait), so we hand off via
`SnapshotHandle::into_arc()` with a comment.
After this commit, no engine code outside `table_store.rs` reaches the
inherent `TableStore` API — the docs/runs.md and docs/invariants.md
claim is now uniformly true.
Co-Authored-By: Ragnor Comerford <ragnor.comerford@gmail.com>
* MR-854: post-rebase doc fixes (Lance 6.0.1, MR-A framing, into_dataset note)
Reviewer feedback on the rebased PR:
* docs/dev/writes.md residuals matrix: drop demoted methods from the trait-surface table (now `pub(crate)`); keep only the two genuine trait-surface residuals (`delete_where`, `create_vector_index`); reframe under MR-A (Lance v7.x bump) per docs/dev/lance.md.
* tests/forbidden_apis.rs: update transitional allow-list header to (a) drop the truncate_table mislabel (truncate_table is a Lance Dataset method, not a TableStore method — overwrite_batch's internal call), (b) reframe trait-surface residuals under MR-A / Lance #6666.
* crates/omnigraph/src/storage_layer.rs::SnapshotHandle::{into_arc, into_dataset}: add single-ref invariant doc — both consume Arc via try_unwrap-or-clone; sibling SnapshotHandle clones across an await point force a deep Dataset clone.
* Replace lance-4.0.0 version refs with lance-6.0.1 in active source/test/dev-doc comments (storage_layer.rs, table_store.rs, table_ops.rs, schema_apply.rs, merge.rs, recovery.rs, staged_writes.rs, consistency.rs, docs/dev/execution.md, docs/user/query-language.md). Historical refs in docs/releases/v0.4.1.md and the canonical "Lance 4.0.0 → 6.0.1 migration" line in docs/dev/lance.md left intact.
No engine code changes.
* MR-854: update docs/dev/invariants.md Storage trait row + gap entry
Reviewer feedback: the docs reorg landed; the invariant row now lives in
docs/dev/invariants.md with stable headings (no more numbered §VI.23).
Update two pieces to reflect MR-854 completion:
* Status table 'Storage trait' row: was 'full call-site migration ... incomplete';
now 'engine call sites all route through db.storage() (MR-854); inline-commit
inherent methods are pub(crate)-demoted; capability/stat surfaces are roadmap'.
* 'Known Gaps' 'Storage abstraction' entry: was 'older inherent TableStore call
sites and inline residuals remain'; now names the closed scope (MR-854 — call
sites migrated, methods demoted, loader fast-paths) and the remaining
trait-surface residuals under MR-A (Lance v7.x bump) and Lance #6666.
Cross-links to docs/dev/lance.md and docs/dev/writes.md so the framing stays
co-located with the canonical Lance surface tracking.
* MR-854: remove dead inline-commit methods from the storage surface
The loader concurrent fast-path (write_batch_to_dataset) is only reached
for LoadMode::Overwrite — Append/Merge route through MutationStaging — so
its Append/Merge arms were unreachable. Collapse it to overwrite-only and
drop the now-unused mode params, which removes the only callers of:
- TableStorage::append_batch + TableStorage::merge_insert_batches (trait)
- TableStore::merge_insert_batch + merge_insert_batches (inherent)
create_btree_index / create_inverted_index had zero callers anywhere
(scalar index builds use the stage_* primitives). Remove both from the
trait and the inherent impl.
Inherent append_batch stays pub(crate): overwrite_batch and recovery
tests use it. Migrate the one trait-append_batch test caller
(seed_person_row) to stage_append + commit_staged. The merge_insert
FirstSeen-workaround rationale moves from the deleted merge_insert_batch
into stage_merge_insert (now the sole merge path). No behavior change.
Also corrects the inaccurate loader residual comment (the prior text
blamed Lance #6658/#6666, which are the delete and vector-index issues,
for keeping overwrite inline; a stage_overwrite primitive already exists
and schema_apply uses it).
* MR-854: seal db.storage() to staged-only; move residuals to InlineCommitResidual
Split the three remaining inline-commit writes (overwrite_batch,
delete_where, create_vector_index) off the TableStorage trait onto a new
sealed InlineCommitResidual trait, reachable only via the explicit
Omnigraph::storage_inline_residual() accessor. db.storage() now exposes
only staged primitives + reads, so engine code cannot couple a write
with a Lance HEAD advance through the default surface — MR-793 acceptance
§1 ("no public method commits as a side effect of writing") now holds by
construction, not by review + naming.
Call sites moved to storage_inline_residual(): loader overwrite
fast-path, the three mutation delete_where paths, the branch-merge
delete, and the vector-index build. Impl bodies are unchanged (same
delegation to the pub(crate) inherent methods); this is a pure surface
reshape with no behavior change.
The residual trait holds two genuinely upstream-blocked methods
(delete_where -> Lance #6658/v7.x, create_vector_index -> Lance #6666)
plus overwrite_batch, kept for the loader's cross-table bulk-overwrite
concurrency until its staged migration lands (tracked follow-up).
* MR-854 docs: describe the staged-only seal; fix stale Lance index URLs
- writes.md / invariants.md / AGENTS.md: the inline-commit residuals now
live on InlineCommitResidual behind db.storage_inline_residual(), so
acceptance §1 holds by construction rather than 'option (b)' per-method
enumeration. Drop the inaccurate 'until Lance exposes
Operation::Overwrite { fragments }' claim (that op exists; stage_overwrite
already builds it) and reframe overwrite_batch as a removable legacy
residual gated on the loader's bulk-overwrite concurrency.
- forbidden_apis.rs: rewrite the allow-list doc for the split surface.
- lance.md: the index spec pages moved from /format/table/index/ to
/format/index/ in Lance 6.x (the old paths 404). Fix all 13 URLs.
* MR-854: fix stale lance-4.0.0 comment refs flagged in review
Addresses greptile (exec/merge.rs) and aaltshuler's stale-version blocker:
update lance-4.0.0 -> 6.0.1 in the comment/doc refs within this PR's
footprint (exec/merge.rs, exec/mutation.rs, docs/dev/writes.md). Also
corrects exec/merge.rs to cite lance#6666 (not #6658) for
build_index_metadata_from_segments — that is the vector-index segment-commit
API; #6658 is the two-phase delete. (Pre-existing 4.0.0 refs in untouched
files like architecture.md/storage.md are main's incomplete migration
cleanup, left out of scope.)
* fix(storage): stage loader overwrites
* fix(storage): stage empty schema rewrites
---------
Co-authored-by: Devin AI <158243242+devin-ai-integration[bot]@users.noreply.github.com>
Co-authored-by: Ragnor Comerford <ragnor.comerford@gmail.com>
Co-authored-by: Ragnor Comerford <hello@ragnor.co>
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||
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aaltshuler
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40a21e4e77 |
docs(cluster): document Stage 3A config-only cluster apply
Co-Authored-By: Claude Fable 5 <noreply@anthropic.com> |
||
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aaltshuler
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89b876c797 | Add cluster state lock recovery | ||
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aaltshuler
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d00d42274e | Implement cluster refresh and import | ||
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Ragnor Comerford
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e0d88d1295
|
fix(unique): collision-free tuple key shared by intake and merge, loud on un-keyable types (#160)
* fix(unique): collision-free tuple key shared by intake and merge, loud on un-keyable types Hardening on top of #133. That PR introduced a shared `loader::composite_unique_key(parts)` joining per-column scalars with U+001F and routed both intake and branch-merge through it, closing the original '|' vs U+001F separator drift. This takes the shared keying the rest of the way to correct-by-design: - Collision-free by construction: the key is now the tuple of per-column scalar strings (Vec<String>) keyed directly, no separator, so no data value (not even a literal U+001F) can forge a collision. - One scalar converter across both paths: intake used an explicit type-match, merge used Arrow's array_value_to_string. Both now derive the key through composite_unique_key(group_columns, row), so they can't drift on conversion. - Loud on un-keyable types: the scalar converter returned None for any Arrow type it didn't recognize, and the caller treated None as null-exempt, so a @unique on a column type it couldn't reduce (list, blob) was silently un-enforced. It now returns Err, surfacing the constraint it can't enforce instead of weakening it in silence. Tests: - consistency::composite_unique_key_is_consistent_across_intake_and_merge pins that intake and merge key the tuple identically (load-on-branch then merge of values containing '|'). - loader unit tests pin tuple keying + null exemption and the loud error on an un-keyable (binary) column. Docs: invariants truth-matrix updated; stale loader/mod.rs line pointers fixed. Scope unchanged: intra-batch / merge-candidate-set only; cross-version uniqueness against committed rows stays a documented gap. * fix(unique): cover all string encodings; make format_tuple private (PR #160 review) Addresses two Greptile P2 comments on PR #160: - unique_key_scalar handled only StringArray (Utf8). The loud-on-unknown-type behavior turned any legal string column that read back as LargeUtf8 or Utf8View into a hard write failure (the old code silently returned None). Add LargeStringArray and StringViewArray arms so a legal string column is keyable in every physical Arrow encoding; the Err path now fires only for a genuinely un-keyable logical type (list/blob/vector), never a legal value in an unenumerated encoding. - format_tuple was pub(crate) but only used within loader/mod.rs; make it a private fn (matches the old format_unique_columns it replaced, minimal exposed surface). New unit test unique_key_scalar_handles_all_string_encodings pins that Utf8 / LargeUtf8 / Utf8View all render rather than error. |
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aaltshuler
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b046515e1c | Merge origin/main into cluster-config-docs | ||
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Ragnor Comerford
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d0e39e677e
|
fix(maintenance): route uncovered drift through repair (#156)
* docs(invariants): note the non-atomic manifest->commit-graph publish gap Every graph publish commits __manifest then appends _graph_commits as two separate writes; a crash between them leaves the manifest ahead of the commit DAG. Live reads + durability are unaffected (reads resolve via the manifest) and recovery does not repair it; impact is bounded to commit history / time-travel by commit id / merge-base completeness. Pre-existing across all publishes, not the optimize reconcile specifically. Documented as a Known Gap; the fix is a commit-graph reconcilable from the manifest, not a recovery sidecar. * fix(maintenance): route uncovered drift through repair * fix(maintenance): harden repair review feedback |
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Andrew Altshuler
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ce150fb0ca
|
docs(testing): fix stale optimize test name in maintenance.rs row (#148)
The maintenance.rs row referenced `optimize_reconciles_preexisting_manifest_head_drift`, which never existed (leftover from the reconcile-drift heuristic removed in #141). The actual second test is `optimize_defers_when_recovery_sidecar_is_pending`. Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com> |
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aaltshuler
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a7956ea5a9 | Add cluster JSON state ledger status | ||
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aaltshuler
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043b02e617 | feat(cluster): add read-only validate and plan | ||
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aaltshuler
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ab5f3b878a | docs: add cluster config specs | ||
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Ragnor Comerford
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e62d9166fb
|
fix: optimize publishes compaction; recovery roll-back converges manifest (#141)
* test(optimize): cover manifest publish + HEAD-drift reconcile Red against the pre-fix optimize, which ran compact_files without publishing the compacted version to __manifest: - maintenance: optimize must publish so the manifest table_version tracks the compacted Lance HEAD and a later schema apply succeeds; and must reconcile a pre-existing manifest-behind-HEAD drift (forged via raw Lance compaction) so strict writes commit again. - end_to_end + composite_flow: post-optimize query / strict update / reopen in the full lifecycle (the canonical flow previously omitted post-optimize writes as a documented "known limitation"). - failpoints: a crash between compaction and the manifest publish rolls forward on next open. * fix(optimize): publish compaction to manifest and reconcile HEAD drift optimize ran Lance compact_files without publishing the new version to __manifest, so the manifest table_version lagged the Lance HEAD: reads stayed pinned to the pre-compaction version, and the next schema apply or strict update/delete failed its HEAD-vs-manifest precondition with "stale view ... refresh and retry" (open-time recovery rollback inflated the gap on retry). optimize now publishes each compacted table's version under the per-(table, main) write queue, guarded by a manifest CAS and a SidecarKind::Optimize recovery sidecar (loose-match; roll-forward is safe because compaction is content-preserving). When a table has nothing left to compact but its Lance HEAD is already ahead of the manifest pin (pre-fix drift, or a recovery restore commit), optimize reconciles the manifest forward to HEAD (metadata-only, no sidecar). Caches and the CSR/CSC graph index are invalidated after a publish. Docs updated (maintenance, storage, branches-commits, writes, testing). * test(recovery): rollback convergence + optimize-defer regressions Red against the current code, landed before the fix: - recovery: after the open-time sweep rolls a sidecar back, the manifest must track Lance HEAD (no residual drift) so a follow-up schema apply succeeds — the original "+1 per retry" loop. Today roll-back restores without publishing, so the manifest lags HEAD and the apply fails its HEAD-vs-manifest precondition. - maintenance: optimize must refuse while a recovery sidecar is pending — operating on an unrecovered graph could publish a partial write the sweep would roll back. Also removes optimize_reconciles_preexisting_manifest_head_drift: the ad-hoc drift reconcile it covered is replaced by recovery-side convergence. * fix(recovery): converge manifest on roll-back; optimize defers on pending recovery Root of PR #141's review findings and the original "+1 per retry" loop: a Lance HEAD ahead of the manifest was ambiguous (benign content-preserving drift vs. a partial write a sidecar will roll back), and optimize's reconcile guessed it benign. Close the class instead of guessing: - Recovery roll-back now PUBLISHES the restored version (via a push_table_update_at_head helper shared with roll-forward), so the manifest tracks the Lance HEAD after recovery — symmetric with roll-forward. This fixes the +1 loop (after one roll-back the retry's HEAD-vs-manifest precondition passes) and removes the only remaining source of orphaned drift. The audit still records the logical rolled-back-to version; the manifest is published at the restore commit (identical content). - optimize drops the ad-hoc drift reconcile and instead REFUSES when a __recovery sidecar is pending, so it only ever operates on a recovered graph (manifest == HEAD); its compaction publish can no longer commit a partial write. With the reconcile gone, the blob-skip-vs-reconcile gap is moot. Updates the rollback recovery-test helper (manifest == HEAD after roll-back), the failpoints assertions, and the user/dev docs. * test(recovery): fix rollback assertion for manifest convergence The roll-back-publishes change makes the manifest version advance after a SchemaApply roll-back (to the old-schema content), so the schema_apply_without_schema_staging_rolls_back_on_next_open assertion must be `version > pre`, not `version == pre`. This update was dropped during the commit churn and surfaced as a CI Test Workspace failure; the old-schema-preserved intent stays covered by count_rows + _schema.pg + the RolledBack convergence invariant. |
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Ragnor Comerford
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54842808db
|
feat(engine): sweep & remove legacy __run__ branch guard (MR-770) (#132)
* feat(engine): sweep legacy __run__ branches via v2→v3 manifest migration Pre-v0.4.0 graphs can carry stale `__run__<id>` staging branches on the `__manifest` dataset, left by the Run state machine removed in MR-771. Lance's `list_branches` still enumerates them, so they leak into `branch_list()` and count as blocking branches at schema-apply time. Add a one-time `migrate_v2_to_v3` arm to the internal-schema dispatcher: on the first read-write open it enumerates `__manifest` branches, deletes every `__run__*` ref, and bumps the stamp to 3. Idempotent under retry (re-enumerates fresh each run). The `"__run__"` prefix is inlined so the migration does not depend on the run_registry guard that MR-770 removes next. This is the prerequisite sweep; the guard removal follows in the next commit. * refactor(engine): remove the legacy __run__ branch guard (MR-770) With the v2→v3 migration sweeping stale `__run__*` branches off `__manifest` on first read-write open, the defense-in-depth `is_internal_run_branch` guard is no longer needed. - delete `db/run_registry.rs`; drop the module + re-export from `db/mod.rs` - collapse `is_internal_system_branch` to the schema-apply-lock check only - `ensure_public_branch_ref`: drop the run-ref rejection; `__run__*` is now an ordinary branch name - `branch_merge`: reject `is_internal_system_branch` (was run-only) so the schema-apply lock is rejected consistently with create/delete — a small, deliberate tightening - update the inline schema-apply test + the writes integration tests (`public_branch_apis_reject_internal_run_refs` → `public_branch_apis_reject_internal_system_refs`, which also asserts `__run__*` now creates successfully) - docs: flip the "pending production sweep / defense-in-depth" notes to "auto-swept by the v2→v3 migration"; document the read-only-open limitation Known residual: the inert `_graph_runs.lance` / `_graph_run_actors.lance` bytes remain until a `StorageAdapter::delete_prefix` primitive lands. * fix(engine): run __run__ sweep at Omnigraph::open, not only on publish Review (PR #132) caught a regression: removing __run__ from `is_internal_system_branch` exposed legacy `__run__*` branches to the schema-apply blocking-branch checks (schema_apply.rs:104 and :778) and to `branch_list()`, but the v2→v3 sweep ran only inside the publisher's `load_publish_state`. On a pre-v0.4.0 graph whose first write is a schema apply, the blocking-branch check fires before any publish, so apply failed with "found non-main branches: __run__…". The same lazy timing also created a reverse hazard: a user-created `__run__*` branch on a still-v2 graph could be deleted by the first publish's sweep. Fix: run the internal-schema migration in `Omnigraph::open(ReadWrite)` (new `manifest::migrate_on_open`), before the coordinator reads branch state. The sweep now lands before any branch-observing code, and a graph is stamped v3 at open — so the one-time sweep can never catch a legitimately-created branch. Both checks and `branch_list` see the swept graph; correct by construction for every write path. Accepted residual: a read-only open of an unmigrated legacy graph still lists `__run__*` (read-only opens must not write, so they can't sweep). Documented. Regression test `legacy_run_branch_is_swept_on_open_and_does_not_block_schema_apply` confirmed RED before the fix (panicked on the branch_list leak assertion) and GREEN after. Also updates the stale schema_apply.rs comment, the writes.md "Migration code" section, and adds the v3 row to storage.md's migration table. * test(engine): sweep multiple legacy __run__ branches; doc nit Strengthen the v2→v3 migration test to synthesize three `__run__*` branches (a real legacy graph accumulates one per run) so the migration's delete loop is exercised on a single reused dataset handle, not just a single branch. Confirms multi-branch deletion is safe. Also drop a stale "active runs" reference from the branch_delete doc line. * fix(engine): force-delete in __run__ sweep for concurrency safety `migrate_v2_to_v3` ran `Dataset::delete_branch` (= `branches().delete(.., false)`), which errors "BranchContents not found" if the branch is already gone. Since the sweep now runs in `Omnigraph::open(ReadWrite)`, two processes opening the same legacy v2 graph concurrently would race: one wins each delete, the other's open fails. The migration only claimed idempotency under *sequential* retry. Switch to `Dataset::force_delete_branch` (= `delete(.., true)`), Lance's documented path for cleaning up zombie branches, which tolerates an already-absent branch. The sweep is now idempotent under concurrent runners and robust to partial/zombie state. Found in self-review; no behavior change for the common single-open path. * docs(release): note MR-770 __run__ cleanup in v0.6.1 * docs(branches): reconcile branch cleanup semantics |
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Andrew Altshuler
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fd8e078a77
|
ci(codeowners): add aaltshuler to engineering role (#147)
Restores aaltshuler as an `engineering` code-owner (removed in #142), so `crates/**` and repo-infra PRs have a second reviewer besides the sole owner ragnorc — unblocking review of author-ragnorc PRs (e.g. #132) that ragnorc cannot self-approve. Edited the source of truth (.github/codeowners-roles.yml) and re-rendered .github/CODEOWNERS + the docs/dev/codeowners.md tables via .github/scripts/render-codeowners.py, per the documented flow. Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com> |
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Andrew Altshuler
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343f1f17ed
|
governance: external contribution model (issues/discussions/RFCs/PRs) (#143)
Formalize the public contribution surface. Maintainers keep a separate internal process and are exempt from the intake gates; everyone stays bound by review, CODEOWNERS, and branch protection. Model: - Issues = problem reports only (bug form + config.yml redirects ideas to Discussions and disables blank issues). - Discussions = ideas + RFC incubation. - RFCs = anyone (incl. external) authors docs/rfcs/NNNN-*.md; a maintainer merging it is acceptance. Distinct from the maintainer-internal docs/dev/rfc-00N-* track. - PRs = link an `accepted` issue or accepted RFC, or use the trivial fast-lane (typos/docs/deps). Enforced softly to start (template + review). Adds GOVERNANCE.md, rewrites CONTRIBUTING.md, adds docs/rfcs/ (README + template), .github issue/PR/discussion templates. Wires docs/rfcs/ into the doc-link checker (excluded like releases; linked from docs/dev/index.md). Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com> |
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Andrew Altshuler
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c7365bf8ef
|
ci(codeowners): un-trap required checks, auto-render, generate owner tables (#142)
The CODEOWNERS required checks blocked every PR — the real root cause was a name mismatch, compounded by a path filter: - branch-protection.json required the contexts `CODEOWNERS / drift` and `CODEOWNERS / noedit` (the GitHub UI "workflow / job-id" display form), but the jobs report check-run names from their `name:` fields — "CODEOWNERS matches source" / "CODEOWNERS not hand-edited". The required contexts therefore never matched any reported check and sat permanently pending. - The workflow was also path-filtered to CODEOWNERS files, so it didn't even run for most PRs. Net effect: with both required checks unsatisfiable, every PR could only land via admin override (e.g. #140). Fixes: - A: drop the `paths:` filter so the workflow runs on every PR and both required contexts always report. - name fix: point branch-protection.json at the actual job names verbatim, and add a doc note that the contexts must equal the job `name:` values. - B: the `drift` job now re-renders and, on same-repo PRs, auto-commits the regenerated artifacts back to the branch (mirrors the openapi.json job in ci.yml); forks / manual runs strict-check instead. Contributors no longer run the script by hand. - D: render-codeowners.py also generates a "who owns what" path->owners + roles table spliced into docs/dev/codeowners.md between markers, so the human-readable view never drifts. Idempotent; CODEOWNERS output unchanged. - docs: correct the stale `enforce_admins: true` line (JSON and live are false). NOTE: the branch-protection.json change only takes effect after an admin runs `./scripts/apply-branch-protection.sh` (deliberate manual step, per docs/dev/branch-protection.md). Until then `main` still requires the old mismatched contexts, so this PR itself needs an admin-override merge — the last one that should be necessary. Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com> |
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Ragnor Comerford
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d54bccb940
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fix(optimize): skip blob-bearing tables to avoid Lance compaction crash (#138)
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* test(optimize): pin Lance blob-column compaction failure as a surface guard
Lance compact_files mis-decodes blob-v2 columns under its forced BlobHandling::AllBinary read ("more fields in the schema than provided column indices"), failing even a pristine uniform-V2_2 multi-fragment blob table; reads use descriptor handling and are unaffected.
Guard 10 reproduces this and is self-retiring: it turns red on the Lance bump that fixes the bug, forcing LANCE_SUPPORTS_BLOB_COMPACTION to flip.
* fix(optimize): skip blob-bearing tables instead of crashing compaction
omnigraph optimize aborted the whole sweep when any node/edge table had a Blob property: Lance compact_files cannot decode blob-v2 columns under AllBinary (the column-index error pinned by the surface guard). Skip blob-bearing tables behind a LANCE_SUPPORTS_BLOB_COMPACTION gate and report them via TableOptimizeStats.skipped / SkipReason (surfaced in the CLI and a tracing::warn) instead of erroring, which also isolates the failure so the other tables still compact.
Reads/writes are unaffected; only fragment/space reclamation on blob tables is deferred until the upstream Lance fix. Adds a maintenance.rs regression test (validated red with the column-index symptom before the fix, green after), a concise v0.6.1 release note, and updates docs (maintenance, cli-reference, AGENTS capability matrix, invariants Known Gaps, lance.md audit, constants).
* refactor(optimize): make TableOptimizeStats and SkipReason non_exhaustive
Both are returned result types, never built by callers, so #[non_exhaustive] makes this the last field/variant addition that can break downstream literal construction and keeps future ones non-breaking (review feedback on the public-field addition). The v0.6.1 Compatibility Notes call out the source-level change.
Also drops the now-stale "RED today / GREEN after the fix lands" narration in the optimize_skips_blob_table_and_reports_skip test (historical regression context now that the fix is in this branch), and folds in the expanded v0.6.1 release note.
* chore(release): bump workspace to v0.6.1
Coherent version bump to accompany the v0.6.1 release note: all five crate manifests + path-dependency constraints, Cargo.lock, the AGENTS.md surveyed-version line, and openapi.json info.version move 0.6.0 -> 0.6.1. Matches the established release pattern (#118 landed the v0.6.0 note + bump together) and resolves the Codex/Devin review flag that a v0.6.1 note without a bump leaves CARGO_PKG_VERSION reporting 0.6.0 and mixed package versions.
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Ragnor Comerford
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3c2b1b8051
|
Stored-query registry foundation + config/CLI RFC-002 (#128)
* MR-969: add stored-query registry config surface
Introduce the `queries:` block in omnigraph.yaml — an inline
`name -> entry` map of stored queries, per-graph
(`graphs.<id>.queries`) and top-level for single-graph mode, mirroring
how `policy` is wired in both modes. Each entry points at a `.gq` file
and carries optional MCP exposure settings (`expose`, `tool_name`),
defaulting to not-exposed.
Additive: absent `queries:` leaves current behavior unchanged.
- QueryEntry { file, mcp: McpSettings { expose, tool_name } }
- `queries` field on TargetConfig + OmnigraphConfig (serde default)
- query_entries() / target_query_entries() accessors
- resolve_query_file() — base_dir-relative `.gq` path resolution
- round-trip + absent-block tests
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
* Add stored-query registry loader and GraphHandle wiring
Add a `queries` module: QueryRegistry loads each declared `.gq` entry,
parses it, and selects the query whose symbol matches the manifest key,
asserting the two agree (key == `query <name>` symbol). Identity is the
query name; a key/symbol mismatch is a load-time error. Errors are
collected, not fail-fast, so a bad registry surfaces every broken entry
at once. Schema type-checking is deliberately left to a separate pass so
the loader stays callable without an open engine.
Thread an `Option<Arc<QueryRegistry>>` through GraphHandle alongside the
per-graph policy; the URI-canonicalizing clone propagates it. Production
openers default to None for now — the boot path loads and attaches the
registry in a later change.
- QueryRegistry::{from_specs, load, lookup, iter}; StoredQuery::is_mutation
- GraphHandle.queries field, propagated on canonical clone
- registry unit tests: identity match/mismatch, multi-query selection,
per-entry parse errors, error collection, mutation classification
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
* docs: add RFC-002 config & CLI architecture
Layered config (user-global ~/.config/omnigraph/ + per-project), a
unifying `target` abstraction resolving to (locus, graph, sub-state,
credential) with embedded-URI XOR remote-server loci, multi-server ×
multi-graph client targeting, credentials by-reference, and the
file-naming decision: project and server config are one artifact
(`omnigraph.yaml`); the only differently-named file is the user-global
`config.yaml`, split by scope not role. Includes the 12-factor bind
portability rule (prefer --bind/OMNIGRAPH_BIND over a committed
server.bind) and the defined-locally / invoked-remotely model for
stored queries. Derived from first principles working backwards from
what the engine enables; validated against kube/Helix/git/compose.
Linked from docs/dev/index.md. Proposed; phased rollout for the
MR-973/974/981 family.
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
* Add check() to validate stored queries against the live schema
A pure check(registry, catalog) that type-checks every stored query via
the same typecheck_query_decl the engine runs for inline queries — no
parallel implementation. Failures are collected, not fail-fast, so an
operator sees every broken query (e.g. a type/property a migration
renamed or removed) in one pass. Breakages are fatal (the boot path will
refuse to start); warnings are advisory.
Pure over (registry, catalog) so it is callable both at boot (engine
catalog) and offline from the CLI without an open engine.
Advisory lint: an mcp.expose:true query that declares a Vector(N)
parameter warns — an LLM cannot supply a raw embedding vector; such a
query should take a String parameter and embed server-side. Warns
rather than rejects, since service-to-service callers may pass vectors.
- CheckReport { breakages, warnings }; has_breakages / is_clean
- tests: valid query, unknown type, unknown property, collect-not-fail-fast,
vector-param-exposed warns, unexposed silent
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
* Drop internal plan-label refs from stored-query config comments
Doc comments referenced sequencing labels ("C2") that mean nothing to a
reader; reword to describe the behavior directly. Comment-only.
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
* docs: reconcile aliases with the role model in RFC-002
Place the existing client-only `aliases:` block in the client/server
role split: aliases are client-role (CLI, embedded, ungated) and may
live in both user-global and project config; `queries:` is server-role
(deployment manifest only). They overlap as "name -> .gq"; `queries:` is
the superset, and the end-state subsumes aliases (definition -> queries,
target/branch/format -> client invocation context, positional args ->
CLI sugar). v1 keeps aliases unchanged.
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
* docs: make RFC-002 config global-first, project-optional
The global user config is the primary, self-sufficient default; the
CLI works from any directory with no project file (the kubectl/aws/gh
posture), a deliberate flip from today's project-anchored behavior.
The project omnigraph.yaml becomes an optional repo-scoped override and
the deployment manifest. Uniform schema, both layers optional; global
can hold any section including a personal server's graphs/queries.
Additive: project still overrides global; the flip adds a fallback
layer below the project file rather than removing it.
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
* docs: justify XDG ~/.config/omnigraph over legacy ~/.omnigraph in RFC-002
Make the rationale explicit: XDG-first because OmniGraph is a client
that will cache remote catalogs and keep session state alongside
secrets, and XDG separates config / cache / state into distinct dirs
(clear cache without touching creds; backups skip cache) whereas a
single ~/.omnigraph/ mixes them. Honor ~/.omnigraph/ as a fallback for
the peer-group (aws/kube/docker/helix) expectation. Add XDG_CACHE_HOME
/ XDG_STATE_HOME to the override precedence.
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
* docs: build RFC-002 credentials on the existing env-file mechanism
OmniGraph already has credentials-by-reference: bearer_token_env names
the env var, and auth.env_file is a git-ignored dotenv the CLI
auto-loads (real env vars win), resolved via resolve_remote_bearer_token.
The RFC's proposed credentials.yaml + token_env were redundant parallel
inventions. Reconcile: reuse bearer_token_env (extend to
servers.<name>) and auth.env_file (add a global ~/.config/omnigraph/.env
layered under the project .env.omni); OS keychain is an additive future
resolver. No new credentials.yaml. Updated summary, non-goals,
background, file-naming, credentials, example, login, migration, rollout.
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
* docs: use single ~/.omnigraph dir (Helix-style), not XDG, in RFC-002
Reverse the earlier XDG-first call. The prior argument rested on a false
dichotomy (single-dir => mixed config/cache/state); in fact the peer
tools (aws, kube, helix) achieve separation via SUBDIRECTORIES inside
one ~/.tool/ dir (~/.aws/sso/cache/, ~/.kube/cache/), getting cache
hygiene AND one discoverable place. So everything goes under
~/.omnigraph/: config.yaml, credentials (dotenv, 0600), cache/, state/.
Lower cognitive load, matches what DB/cloud-CLI users expect, matches
Helix. OMNIGRAPH_HOME overrides; $XDG_CONFIG_HOME optionally honored but
~/.omnigraph/ is canonical. Updated all paths, the rationale paragraph,
the file-naming table (added a cache/state row), and env precedence.
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
* docs: reconcile RFC-002 with shipped/planned CLI tickets
Align with reality found in existing tickets:
- Noun is graph/graphs, not target/targets (MR-603 done renamed the
config key targets->graphs, flag --graph). Use graphs:/--graph; an
entry is embedded (uri) XOR remote (server + remote graph name).
- ~/.omnigraph/ confirmed by MR-581 (og template pull, done) which
already quick-starts templates there.
- Templates already exist (MR-581/MR-531) — not invented here.
- The init family is already specced (init, quickstart MR-973, serve
MR-970, prune MR-972, mcp install MR-974, agent-mode MR-981); this
RFC only adds the user route (~/.omnigraph/config.yaml + login).
- aliases: -> operations: planned (MR-839).
- bearer_token_env gap tracked in MR-971.
- query lint/check already exist (MR-639) — registry validator must not
collide with the singular `query check`.
Add a Reconciliation section; fix the canonical example to graphs:/--graph.
Also: merge semantics refined (deep-merge settings, replace named
entries, replace lists, config view --resolved --show-origin).
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
* docs: correct stale-ticket claims and fold init/bootstrap design into RFC-002
Verify against code, not ticket statuses (MR-581 is marked done but is
stale/unbuilt): no ~/.omnigraph usage, no template/serve/quickstart/
prune/login commands exist; config still uses aliases: (no operations:).
So ~/.omnigraph/ stands on peer-convention merits alone, and templates
are a design question, not a foothold. Add §7.5: the three-tier init
model (user route = login + ~/.omnigraph/config.yaml; thin project init;
fat quickstart + templates) with first-principles positions (split
init/login, in-place refuse-if-exists, interactive vs --auto/agent-mode,
--template flag, secrets-on-scaffold gitignore rule). This RFC owns only
the user route; the rest are sibling tickets (MR-973/970/972/974/981).
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
* docs: breadboard + slice Shape A in RFC-002
Add the implementation breadboard (places P1-P5, affordances N1-N14 with
NEW markers, mermaid) and five vertical slices for the selected config/
CLI/init shape: V1 global layer + merge engine + config view; V2 remote
graphs + HTTP-client path + credential resolution; V3 omnigraph login;
V4 init-hardening + quickstart + templates (rides MR-970); V5 agent-mode
(MR-981). Rollout reordered to the slice sequence; spikes X1-X4 gate
their owning slice. V1-V2 close the substantive client->server gap.
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
* Add InvokeQuery Cedar action (coarse, graph-scoped)
A per-graph, branch-scoped action that gates invoking a server-side
stored query by name. Coarse for now: an `invoke_query` allow rule
permits any stored query on the graph; a future, additive refinement
adds an optional per-query-name scope without changing rules written
against the coarse action. Enforcement is at the HTTP boundary; the
engine `_as` writers still enforce read/change per the query body, so a
stored mutation is double-gated (invoke_query to reach the tool, change
for the write). No call site yet — the invocation handler wires it in a
later change (same pattern as Admin/GraphList added ahead of consumers).
- variant + as_str/resource_kind(Graph)/FromStr/uses_branch_scope
- Cedar schema: invoke_query appliesTo Graph
- tests: per-graph allow/deny, branch-scope accepted
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
* Load and type-check stored queries at server boot, refusing breakage
At startup the server now loads each graph's stored-query registry,
type-checks every query against that graph's live schema, and refuses to
boot if any query references a type/property the schema doesn't have
(same posture as bad policy YAML) — so schema drift surfaces at the
deploy boundary, not silently at invocation. Non-blocking warnings are
logged. The validated registry is attached to the GraphHandle (the two
production sites previously held `queries: None`).
Loading (parse + key==symbol identity) happens at settings-build time
where the config is in scope; the schema type-check happens after each
engine opens (single mode in `open_single_with_queries`, multi mode in
`open_single_graph`). `open_with_bearer_tokens_and_policy` delegates
with an empty registry so its 18 test callers are unchanged; the public
`new_*` constructors are unchanged (only the private build path threads
the registry).
- ServerConfigMode::Single / GraphStartupConfig carry the loaded registry
- boot tests: valid registry boots; type-broken query refuses boot + names it
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
* Add `omnigraph queries validate` and `queries list` CLI
`queries validate` type-checks the stored-query registry against the
live schema offline — it opens the selected graph, runs the same
check() the server runs at boot, prints breakages/warnings (human or
--json), and exits non-zero on any breakage — so an operator can catch
a query broken by a schema change without restarting the server.
`queries list` prints each registered query's name, MCP exposure, and
typed params.
Named `validate` (not `check`) to avoid overlap with the existing
`omnigraph lint` — `query check`/`query lint` are already deprecated
argv-shims to `lint`. Registry entries resolve like the server: a named
graph uses its per-graph `queries:`; otherwise the top-level one.
- Queries subcommand group; reuses QueryRegistry::load + check from
omnigraph-server; local-only (needs the schema), mirrors lint
- tests: clean registry exits 0, broken query exits non-zero + names it,
list shows the query and its typed params
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
* Route registry selection through one shared query_entries_for
The "which queries: block applies for graph X" rule existed twice — the
server boot path and the CLI's registry_entries — and had already drifted:
the CLI carried an unreachable unwrap_or_else fallback the server lacked.
Add OmnigraphConfig::query_entries_for(graph: Option<&str>) as the single
definition (named graph -> its per-graph block; otherwise top-level) and
route all three sites through it: server single mode, server multi-graph
loop, and the CLI. The CLI's dead fallback arm is deleted; CLI and server
now resolve identically by construction.
No behavior change. Extends the config round-trip test to pin the selector,
including the unknown-name -> top-level fallback the deleted CLI arm covered.
* Funnel registry validation through one validate_and_attach gate
The check -> refuse-on-breakage -> log-warnings -> empty->None block was
copy-pasted across both open paths (single mode and the multi-graph
per-graph open), differing only by the graph label. A third opener could
attach a registry that was never schema-checked.
Extract validate_and_attach(queries, catalog, label) -> Option<Arc<..>> as
the single gate both paths call, so attaching an unchecked registry is no
longer expressible. The catalog handle is an owned Arc, so calling it
before the multi-mode policy match (which rebinds db) is borrow-clean.
No behavior change. Adds a direct unit test of the helper (empty / clean /
breakage incl. the graph label in the message) — covering the multi-graph
path's logic, which previously had no boot-refusal coverage.
* Resolve param types structurally in the MCP vector lint
The exposed-query advisory detected vector params with
type_name.starts_with("Vector(") — a second copy of the compiler's own
ScalarType::from_str_name vector parsing that could drift from it.
Key the lint off PropType::from_param_type_name + ScalarType::Vector(_)
instead, the one canonical resolver the type system already uses. Any
future param-suppliability lint now reads the structured type rather than
scanning the surface string.
Behavior-preserving: the grammar forbids list-of-vector params
(list_type = "[" base_type "]", and base_type excludes Vector), so the only
input where the structured and string checks could differ is unparseable.
Adds a guard test that an exposed String param does not false-trigger the
warning.
* Refuse duplicate MCP tool names across exposed stored queries
The effective MCP tool name (explicit tool_name, else the query name) is a
second identity namespace beside the registry key, but nothing enforced it
unique — two exposed queries could claim one catalog key, and each consumer
re-derived the name ad hoc.
Add StoredQuery::effective_tool_name() as the one definition, and a
load-time uniqueness pass in from_specs over exposed queries: a collision is
a collected LoadError naming the loser and the winner. Scoped to exposed
queries (unexposed have no MCP tool); deterministic over the BTreeMap so the
first-declared wins and the error order is stable.
New (rare) refusal: a config with colliding exposed tool names now fails
`omnigraph queries validate` offline and refuses server boot, the same
posture as a malformed registry. Release-note-worthy.
Test-first: duplicate_exposed_tool_name_is_a_load_error (red before the
pass, green after) + a CLI offline test; the unexposed sibling pins the
exposed-only scope; effective_tool_name asserts folded into the load test.
* docs: document the queries registry, CLI, and invoke_query action
The stored-query surface shipped without user docs. Add it, per the same-PR
maintenance contract:
- policy.md: invoke_query as per-graph action #10 (branch-scoped), with the
double-gating note; renumber graph_list; add it to the branch_scope list.
- cli-reference.md: the `queries validate | list` command, and the
`queries:` config block (per-graph + top-level) with mcp.expose/tool_name
and the tool-name uniqueness rule.
- server.md: boot-time stored-query type-check (refuse on breakage), noting
invocation over HTTP/MCP is not yet exposed.
* Add POST /queries/{name} stored-query invocation handler
Invoke a curated server-side stored query by name: source + name come from
the per-graph queries: registry, the client sends only runtime inputs
(params, branch, snapshot). Gated by the invoke_query Cedar action at the
boundary; the handler delegates to the existing run_query/run_mutate, whose
inner Read/Change enforce still runs — so a stored mutation is double-gated
(invoke_query to reach the tool, change for the write).
- InvokeStoredQueryRequest + an untagged InvokeStoredQueryResponse
{ Read(ReadOutput), Change(ChangeOutput) } → one Json<_> return type and a
oneOf 200 schema (a correct contract, not a wrong-but-simple one).
- Route lives in per_graph_protected → single-mode /queries/{name} and
multi-mode /graphs/{id}/queries/{name} for free.
- Deny == unknown: an invoke_query denial and a missing query both return the
same 404, so the catalog can't be probed by an unauthorized caller.
- OpenAPI regenerated; tests cover read, mutation double-gate (403 vs 200),
bad-param 400, and the identical-404 deny path.
Completes the MR-969 V1 invocation slice (registry + /queries/{name} + invoke_query).
* docs: stored-query invocation endpoint; flip the not-yet-exposed caveat
Now that POST /queries/{name} ships (C7), document it: add the endpoint to
server.md's inventory + an invocation section (body, untagged read/mutate
envelope, invoke_query gate, double-gated mutations, deny == 404), and flip
the startup note that said invocation was not yet exposed. In policy.md,
replace "no invocation call site yet" on the invoke_query action with a
pointer to the endpoint.
* Scope the stored-query 404-hiding claim to non-invoke_query callers
Review found the deny==404 catalog-hiding was overstated as a contract: it
holds only at the outer invoke_query gate. A caller that HOLDS invoke_query
but lacks read/change gets the inner gate's 403 for an existing query vs 404
for an unknown one — so existence is visible to grant-holders by design (the
intended double-gate). The handler docstring, OpenAPI 404 description, and
server.md all claimed the 404 was airtight against any denied actor.
Correct the wording in all three (no behavior change) and add the missing
symmetric test (invoke_query but no read -> 403 for an existing query, 404
for unknown) so the actual contract is pinned. Also document that in
default-deny mode (tokens, no policy) every invocation 404s until an
invoke_query rule is configured.
Nits: the from_specs collision comment said "first declared wins" but it is
lexicographically-first by name (BTreeMap); the effective_tool_name docstring
overclaimed the CLI display routes through it (it resolves the rule on its
own output DTO).
* Default mcp.expose to true (the manifest entry is the opt-in)
expose controls MCP-catalog membership only — it is not an authorization
gate (invocation is gated by invoke_query regardless). So requiring a
per-query mcp.expose: true was friction with no safety benefit: a
non-exposed query is still HTTP-invocable by name. Flip the default so
declaring a query in the manifest exposes it to the agent tool catalog by
default; expose: false is the escape hatch for service-only queries.
Both the absent-mcp path (Default impl) and the present-but-no-expose path
(serde default fn) now yield true. Doc comments + cli-reference updated; the
config round-trip test asserts the new default.
* Add GET /queries stored-query catalog endpoint
List a graph's mcp.expose stored queries as a typed tool catalog so a client
(the MCP server) can register them as tools without fetching .gq source.
Each entry carries name, MCP tool_name, description/instruction, a
read/mutate flag, and decomposed typed params (kind enum: string|bool|int|
bigint|float|date|datetime|blob|vector|list, plus item_kind for lists and
vector_dim) — so the consumer builds an input schema with a closed match and
never re-parses omnigraph type spelling. I64/U64 are bigint (string on the
wire): a JSON number loses precision past 2^53 and the engine already accepts
decimal strings.
Read-gated (works in default-deny; the catalog is graph-wide, authorized
against main). NOT Cedar-filtered per query yet — a reader can list a query
whose invoke_query they lack (documented gap until per-query authz lands);
invocation stays invoke_query-gated + deny==404.
- api: QueriesCatalogOutput / QueryCatalogEntry / ParamDescriptor / ParamKind
+ query_catalog_entry (reuses PropType::from_param_type_name; scalar_kind is
exhaustive, so a new ScalarType is a compile error here until catalogued).
- GET /queries route in per_graph_protected (→ /graphs/{id}/queries in multi
mode); OpenAPI regenerated; path allowlists updated.
- Tests: projection unit (every kind, list, vector, nullable, mutation,
empty) + handler (exposed-only filter, read-gate probe-oracle, empty
registry).
* docs: GET /queries stored-query catalog endpoint
Document the catalog: the endpoint table row (GET /queries, read-gated), a
catalog section (typed-param kind enum, bigint/date/datetime/blob-as-string,
graph-wide/branch-independent, mcp.expose default true, the read-gated
probe-oracle gap), and flip the startup note now that the catalog ships.
* Collect file-I/O and parse errors in QueryRegistry::load in one pass
load() early-returned on any unreadable .gq file, masking parse / identity /
tool-name-collision errors in the OTHER (readable) files — so an operator
fixed the missing file, restarted, and only then saw the next broken query.
Now it collects I/O errors but still runs from_specs on the readable specs
and returns the union, so every broken entry surfaces at once (matching the
collected-errors contract the rest of the registry already follows).
Safe: from_specs' tool-name collision check runs over loaded queries only, so
dropping an I/O-failed entry can only under-report a collision, never invent
one. I/O errors are ordered first (BTreeMap key order), then spec errors.
Adds a load-level test (tempdir: a valid, a missing, and a parse-broken .gq)
asserting all three surface in one Err — confirmed red before the fix.
* Make invoke_query graph-scoped (one branch authority)
invoke_query gates reaching the curated stored-query surface — a graph-level
capability. Per-branch/snapshot access is already enforced by the inner
read/change gate in run_query/run_mutate (authorized against the resolved
branch), so branch-scoping the outer gate was redundant AND wrong for snapshot
reads (it defaulted to main). Drop the branch dimension: remove InvokeQuery
from uses_branch_scope (it joins admin as graph-scoped) and authorize the
boundary gate with branch: None.
Lossless: an actor confined to branch X by their read/change rules can still
only invoke a stored query that touches X. A rule that sets branch_scope on
invoke_query is now rejected by validate() — write invoke_query in its own
rule.
Ripple (atomic): restructure the server invoke fixture so invoke_query sits in
its own branch_scope-free rule; invert invoke_query_is_branch_scoped ->
invoke_query_rejects_branch_scope; the per-graph authorize test uses
branch: None; docs (policy.md, server.md, the InvokeQuery doc). No wire/OpenAPI
change.
* Resolve graph config by identity, not server mode
Which policy/queries block applies for a graph was decided three different,
mode-dependent ways: single-mode boot used top-level even for a named graph;
multi-mode used per-graph (and silently ignored a top-level queries block); the
CLI used per-graph for a named target. So `queries validate --target prod`
could check a different registry than the single-mode server loaded, and a
named graph's per-graph policy/queries were silently shadowed.
Make config a function of graph IDENTITY: a graph served by NAME
(--target/server.graph, a graphs: entry) uses its own graphs.<name>.{policy,
queries}; a bare URI is anonymous and uses top-level. One rule, applied by
single-mode boot, multi-mode boot, and the CLI — so they can't diverge and the
CLI predicts the server exactly.
No silent ignore: serving a named graph while a top-level policy/queries block
is populated now refuses boot, naming the block (the multi-mode top-level-policy
bail, extended to queries and to single-mode-named). The CLI's `queries
validate` derives the schema URI and the registry from ONE selection, and a
positional URI forces anonymous (ignoring cli.graph) so the two can't come from
different graphs.
BREAKING (released behavior): single mode by name (--target/server.graph) with
top-level policy/queries previously used top-level; it now uses the per-graph
block and refuses boot if top-level is also populated. Bare-URI single mode is
unchanged. Loud, with migration text pointing at graphs.<name>.
- config: resolve_policy_file_for (policy sibling of query_entries_for, no
top-level fallback) + populated_top_level_blocks for the coherence check.
- characterization tests (single-mode named -> per-graph; named + top-level ->
bail; multi-mode top-level queries -> bail; CLI positional-URI -> top-level).
- docs: policy.md, server.md, cli-reference.md.
* docs: RFC-002 credentials keyed by server name (keychain/profile/env)
Reworks the RFC's credentials model: secrets are keyed by server name — OS
keychain `omnigraph:<server>` (preferred) -> a `[<server>]` profile in
`~/.omnigraph/credentials` -> `OMNIGRAPH_TOKEN[_<SERVER>]` env (CI), the
AWS/gh/kube model. `servers.<name>` is endpoint-only by default but may carry
an explicit, secret-free `auth: { token: { env|file|command|keychain } }`
source. The shipped `bearer_token_env` + `.env.omni` dotenv remain a legacy
compat path; no `credentials.yaml`.
* docs: RFC-002 — typed graph locator (storage/server/graph_id), not a uri string
Add §1.1: the resolved graph address is a typed GraphLocator
(Embedded{storage} | Remote{server, graph_id}), not a flat uri: String.
Diagnoses the string model's cost in the code today (~16 is_remote_uri forks,
TargetConfig can't express multi-server x multi-graph, the CLI bails on remote,
the ts SDK models baseUrl+graphId separately) and settles the YAML naming so
the key names the locus:
- storage: (embedded) — shipped uri: is a deprecated alias
- server: + graph_id: (remote) — graph_id defaults to the entry key
- storage xor server, reject both/neither (no silent ambiguity)
Kills the graphs:/graph: collision and the uri:-might-be-a-server ambiguity.
Updates the §1/§8 examples and the entry-shape notes to the new naming.
* Test: queries list must reject an unknown --target
queries list opens no graph URI, so unknown-graph validation does not ride
along on resolve_target_uri the way it does for every other command. The new
test reproduces the gap: with an unknown --target the command currently exits 0
and prints the (empty) top-level registry instead of erroring like the
URI-resolving commands do. Fails against current code; the fix follows.
* Validate the graph selection in queries list
Graph-existence validation was a side effect of URI resolution: every
URI-resolving command rejects an unknown --target via resolve_target_uri, but
queries list opens no URI, so query_entries_for(Some(unknown)) silently fell
back to the top-level registry and showed the wrong (or empty) catalog.
Make membership a property of the selection: add the fallible
resolve_graph_selection alongside the infallible query_entries_for (a known
name passes through, an unknown name errors with the same message as
resolve_target_uri, None stays anonymous), and validate the selection in
execute_queries_list. query_entries_for is unchanged — server boot's bare-URI
path still needs its None -> top-level arm.
* Surface policy-engine errors from stored-query invoke
The invoke handler mapped every authorize_request failure to 404 ('stored
query not found'), which collapsed the authorization decision (deny -> 403)
together with operational failures (no actor -> 401, Cedar evaluation error ->
500). A real policy-engine 500 was hidden as a missing query.
Separate the two concerns instead of sniffing the masked status. Extract
authorize() returning an Authz { Allowed, Denied(msg) } decision and reserve
Err for operational failures only; authorize_request becomes a thin wrapper
that maps Denied -> 403, so the 16 deny-as-403 callers are unchanged. The
invoke handler now matches the decision directly: a denial stays 404 (deny ==
missing, so the catalog can't be probed without the grant), while a 401/500
propagates with its true status.
500 is now a reachable outcome on POST /queries/{name}; document it in the
endpoint responses and regenerate openapi.json.
* Extract the named-graph/top-level coherence rule into one helper
The rule 'a named graph uses its own graphs.<name> block, so a populated
top-level block is a config error' lived inline in single-mode server boot.
Extract it to OmnigraphConfig::ensure_top_level_blocks_honored so the same
definition can be shared by the CLI selection gate (next commit) and the two
can't drift. Boot calls the helper; the message is reworded context-neutral
(drops 'serving') so it reads correctly from both boot and the CLI.
Behavior-preserving: multi-graph mode keeps its own unconditional check, and
single_mode_named_graph_rejects_top_level_blocks still passes.
* Test: queries validate/list must reject a named graph with a top-level block
Server boot refuses a config where a graph is selected by name yet a top-level
queries:/policy.file block is populated (the block would be silently ignored).
The CLI's queries validate/list resolve the same named selection but skip that
coherence check, so they give a false green / list the per-graph block. The new
test reproduces it: validate prints OK and list succeeds where boot would
refuse. Fails against current code; the fix follows.
* Enforce top-level coherence in the single CLI selection gate
queries validate validated graph membership only as a side effect of URI
resolution and queries list only via resolve_graph_selection's membership
check; neither applied the named-graph/top-level coherence rule server boot
enforces, so both gave a false green on a config boot refuses.
Fold ensure_top_level_blocks_honored into resolve_graph_selection so it is the
single gate that returns only valid + server-coherent selections, and route
resolve_selected_graph (queries validate) through it; queries list already
calls the gate. A named graph with a populated top-level block now errors in
both commands, matching boot. A positional URI stays anonymous (top-level
honored), so queries_validate_positional_uri_ignores_default_graph is
unaffected.
* docs: RFC-003 — MCP server surface for omnigraph-server
Detailed MCP-transport design for the stored-query/MCP work, building on the
shipped #128 registry. Corrects the draft against the branch head: the coarse
invoke_query gate + 404 denial-masking are already wired (server_invoke_query),
so per-query invoke_query scope (PolicyRequest has no query-name dimension yet)
is the real prerequisite; positions the doc as superseding rfc-001's MCP
transport (/mcp/tools+/mcp/invoke) and reconciles the shipped mcp.expose YAML
form and the schema-introspection non-goal; grounds the parity surface in the
actual omnigraph-ts package (13 tools with read/change ids, 2 resources).
* docs(config): clarify graph config boundaries
* fix(config): enforce graph-scoped policies and query validation
* fix(cli): require graph selection for scoped query registries
* fix(server): preserve named graph id in single mode policy
* fix(cli): share graph identity for policy resolution
* test(cli): cover policy tooling server graph selection
* fix(cli): honor server graph for policy tooling
---------
Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
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Ragnor Comerford
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353c0c876a
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fix(branch): make branch delete correct under partial failure (#137)
* test(lance): pin force_delete_branch surface guard
Pin the Lance 6.0.1 force_delete_branch behavior the branch-delete
single-authority redesign relies on: plain delete_branch errors on a
missing ref, force_delete_branch removes an existing forked branch, and
the local-store quirk where force_delete on a fully-absent branch still
errors (worked around by the upcoming TableStore::force_delete_branch).
Re-pin the docs/dev/lance.md alignment stanza (9 guards; 4 runtime).
* feat(storage): add force branch-delete to TableStore + CommitGraph
Add TableStore::force_delete_branch and CommitGraph::force_delete_branch
(idempotent: tolerate an already-absent branch via Lance RefNotFound /
NotFound), plus CommitGraph::list_branches for the cleanup reconciler to
diff against the manifest authority. RefConflict (referencing
descendants) is still surfaced. Unused until the branch-delete rewire.
* test(maintenance): red — cleanup reconciles orphaned branch forks
Forge a Lance branch on the Person table that the manifest never
references (a zombie fork from an incomplete prior delete) and assert
cleanup reclaims it while leaving main intact. Fails today: cleanup does
not yet reconcile orphaned forks. Goes green with the next commit.
* fix(maintenance): reconcile orphaned branch forks in cleanup
Add reconcile_orphaned_branches: force_delete_branch every per-table and
commit-graph Lance branch absent from the manifest branch set (the
authority), children-before-parents. Folded into cleanup_all_tables,
runs before version GC. Idempotent and authority-derived; no-ops once
nothing is orphaned, and would harmlessly find nothing if a future Lance
atomic multi-dataset branch op prevented orphans. Adds TableStore::list_branches
and exposes graph_commits_uri(pub crate). Turns the maintenance red test green.
* test(failpoints): red — branch_delete partial failure converges
Add the branch_delete.before_table_cleanup failpoint hook (inert without
the feature) and a regression test: a cleanup-step failure after the
manifest authority flip must leave branch_delete returning Ok, the branch
gone, the orphan stranded, then reclaimed by cleanup, and the name
reusable. Fails today: cleanup_deleted_branch_tables propagates the error
as a hard failure. Goes green with the next commit.
* fix(branch): best-effort fork reclaim after the manifest flip
Make branch_delete treat per-table forks and the commit-graph branch as
derived state reclaimed best-effort with force_delete_branch after the
manifest authority flip. A reclaim failure (transient error, or the
branch_delete.before_table_cleanup failpoint) is logged via tracing::warn
and swallowed: the branch is already gone and the cleanup reconciler
converges the orphan. cleanup_deleted_branch_tables no longer returns an
error or blocks the call. Turns the partial-failure recovery test green.
* test(failpoints): red — recreate over orphaned fork is actionable
After a partial-failure delete leaves a fork orphaned, recreating the
branch name and writing to the previously-forked table before cleanup
runs currently surfaces the opaque ExpectedVersionMismatch ("stale view
... expected manifest table version N"). Assert instead a clear error
pointing the user at cleanup. Goes green with the next commit.
* fix(branch): actionable orphan-collision error in fork_branch_from_state
When a fork's create_branch collides with an existing target ref, reuse
it only if its head matches source_version (a legitimate concurrent
first-write). A version mismatch means a zombie fork from an incomplete
prior delete: return a manifest_conflict pointing the user at
`omnigraph cleanup`, instead of the opaque ExpectedVersionMismatch.
Turns the recreate-over-orphan red test green.
* docs(invariants): single-authority branch-lifecycle + Lance forward-compat
Record branch delete in the Current Truth Matrix: manifest is the single
authority flipped atomically first, per-table forks + commit-graph branch
are derived state reclaimed best-effort with the cleanup reconciler as
backstop, and reusing a name whose reclaim failed surfaces an actionable
error. Note the reconciler is authority-derived and degrades to a no-op
under a future Lance atomic multi-dataset branch op, the same shape as
invariant 7.
* test(failpoints): red — cleanup isolates a single-table failure
Add the cleanup.table_gc failpoint hook (inert without the feature) and
an error: Option<String> field on TableCleanupStats (mechanical, always
None for now). Regression test: a one-shot version-GC failure for one
table must not abort the whole cleanup — assert cleanup still succeeds,
surfaces the failure per-table in stats, and the independent reconcile
pass still reclaimed an orphan. Fails today: the version-GC collect
aborts on the first table error. Goes green with the next commit.
* fix(maintenance): fault-isolate cleanup per table
Make the cleanup sweep do as much as it can and converge on re-run
instead of aborting wholesale on one table's transient error
(invariant 13). The version-GC loop now records a per-table failure on
its stats row (error: Some) and logs it rather than collecting into a
Result that aborts; reconcile_orphaned_branches isolates per-table and
commit-graph failures into BranchReconcileStats.failures. The CLI reports
any failed tables and tells the user to rerun cleanup. Addresses the
Devin review finding. Turns the single-table-failure test green.
* test(failpoints): red — branch_create heals commit-graph zombie + is atomic
Add the branch_delete.before_commit_graph_reclaim failpoint hook and two
regression tests: (a) recreating a name whose delete left a commit-graph
zombie must succeed (today it dies on Lance's internal Clone error), and
(b) branch_create must roll back the manifest branch when the derived
commit-graph branch fails (today it leaves the manifest branch created
while returning Err). Both fail now; green with the next commit. The
existing branch_create_failpoint_triggers test still passes.
* fix(branch): make branch_create atomic + heal commit-graph zombie
branch_create now flips the manifest authority first, then creates the
derived commit-graph branch in create_commit_graph_branch, force-dropping
any orphaned commit-graph ref left by an incomplete prior delete (the
manifest branch is fresh, so a same-named commit-graph branch is provably
a zombie). If commit-graph creation fails, the manifest branch is rolled
back so the name never half-exists. Addresses the Codex review finding.
Turns the two branch_create red tests green; existing tests unaffected.
* test(failpoints): red — fork collision misclassifies live concurrent fork
Add the fork.before_classify failpoint hook and a concurrency test: when
a concurrent first-write legitimately wins the fork race, the loser must
get a retryable refresh-and-retry, not the misleading run-cleanup orphan
error. Today the version-comparison misclassifies the live fork as an
orphan (the Cursor finding). Goes green with the next commit.
* fix(branch): manifest-arbitrated fork-collision classification
Classify a fork collision by the manifest authority instead of comparing
Lance branch versions. Before forking, open_owned_dataset_for_branch_write
re-reads the live manifest: if the table is already forked on the active
branch, a concurrent first-write won and the loser gets a retryable
refresh-and-retry (not a misleading orphan error). fork_branch_from_state
no longer guesses from versions — a create collision past that check is
an orphan, so it returns the actionable cleanup error. Addresses the
Cursor finding; turns the live-concurrent-fork test green, zombie path
unchanged.
* test(failpoints): close branch-lifecycle test gaps
Three coverage additions for the branch-delete work (behavior already
correct; these lock it in and catch regressions):
- cleanup_isolates_reconcile_failure: inject a force-delete failure into
the reconcile loop (new cleanup.reconcile_fork hook) and assert the
sweep continues + converges on re-run. Directly covers the reconcile
loop the Devin finding was about (previously only version-GC was).
- cleanup_reclaims_orphaned_commit_graph_branch: forge a commit-graph
orphan via the delete reclaim failpoint and assert cleanup's
reconcile_commit_graph_orphans drops it (previously untested).
- fork_collision_with_live_concurrent_fork_is_retryable: replace the
fixed 300ms sleep with a deterministic readiness signal (cfg_callback +
compare_exchange atomics) so the two-writer ordering can't flake.
Full failpoints suite 31/0.
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Ragnor Comerford
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2d5c4b1202
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docs: rename runs.md/runs.rs → writes and repoint all references (#131)
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The Run state machine was removed in MR-771 (v0.4.0); `docs/dev/runs.md` and `crates/omnigraph/tests/runs.rs` have since documented and tested the direct-publish write path, so the "runs" name was misleading. - git mv docs/dev/runs.md → docs/dev/writes.md (reframe H1 + intro; keep MR-771 history note) - git mv crates/omnigraph/tests/runs.rs → tests/writes.rs (reframe header) - repoint every runs.md / runs.rs reference across docs, AGENTS.md, and source comments - fix four pre-existing broken `docs/runs.md` links (the file never lived at that path) to `docs/dev/writes.md` - fix the stale v0.4.0 anchor to the live section No behavior change: every source edit is a comment. Engine builds and the renamed test passes 25/25; scripts/check-agents-md.sh passes. The run-removal cleanup itself (run_registry.rs guard, __run__ prefix) is deferred to MR-770. |
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Ragnor Comerford
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24413844ae
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Add Windows release binaries (#127)
* Add Windows release binaries * Fix Windows installer downloads |
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Ragnor Comerford
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50910b3753
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docs: align release artifact docs | ||
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devin-ai-integration[bot]
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1a4d2cee97
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feat: inline query strings in CLI and HTTP server (#110)
* feat(MR-656): inline query strings in CLI and HTTP server
CLI:
- Add -e / --query-string <STRING> to omnigraph read and omnigraph change
- Exactly one of --query, --query-string, --alias is required (3-way XOR)
- Empty --query-string is rejected with a clear error
HTTP:
- New POST /query (read-only, clean field names: query/name/params/branch/snapshot)
- Mutations on /query are rejected with 400 -- use POST /change instead
- ChangeRequest fields polished: query (alias query_source), name (alias query_name)
- POST /read and POST /change remain byte-compatible for existing clients
Tests:
- cli.rs: -e happy-path on read/change, mutex error vs --query, empty -e rejected
- system_local.rs: inline -e read and -e change exercise the local flow
- system_remote.rs: inline -e read/change over HTTP plus direct /query 200/400
- server.rs: /query 200, /query 400 on mutation, /change legacy field alias
- openapi.rs: new /query path, QueryRequest schema, ChangeRequest field-name polish
Docs: cli.md (-e examples), cli-reference.md (read/change rows), server.md (/query)
Co-Authored-By: Ragnor Comerford <ragnor.comerford@gmail.com>
* feat(MR-656): rename read/change to query/mutate with deprecation signals
HTTP server:
- Add POST /mutate as canonical write endpoint (pairs with POST /query).
- Mark POST /read and POST /change as deprecated. Three-channel signal:
* OpenAPI: `deprecated: true` on the operation (every codegen flags
the generated SDK method).
* RFC 9745: response `Deprecation: true` header on every response.
* RFC 8288: response `Link: </successor>; rel="successor-version"`
pointing at /query and /mutate respectively.
- Share business logic across /mutate and /change via run_mutate(); the
/change wrapper is the only place that adds the deprecation headers.
- ChangeRequest field aliases (query_source/query_name) preserved.
- AliasCommand serde now accepts `query`/`mutate` alongside `read`/`change`.
CLI:
- Promote `omnigraph query` / `omnigraph mutate` to top-level canonical
subcommands (clap visible_alias keeps `omnigraph read` / `omnigraph
change` working forever).
- Promote `omnigraph lint` / `omnigraph check` to top-level (was nested
under `omnigraph query lint`, which is now a deprecated argv shim that
rewrites to the canonical form).
- Argv-level preprocessing prints a one-line deprecation warning to
stderr when any legacy spelling is used. Canonical names are silent.
Tests:
- Server: /mutate works, /change emits Deprecation+Link headers, /read
emits Deprecation+Link headers, /query carries no deprecation signal.
- OpenAPI: /read and /change flagged deprecated; /query and /mutate not.
- CLI: canonical `lint` matches deprecated `query lint` / `query check`
output; `read` / `change` print deprecation warnings.
Docs:
- cli.md: new canonical examples; "Deprecated names" migration table.
- cli-reference.md: top-level table updated; aliases.<name>.command
accepts both legacy and canonical spellings.
- server.md: endpoint inventory shows /query and /mutate as canonical
and /read and /change as deprecated; dedicated section explains the
three-channel deprecation signal.
- og-cheet-sheet.md: use new `omnigraph lint` / `omnigraph check`.
- openapi.json regenerated.
Migration is purely cosmetic — every deprecated form continues to work
indefinitely; only the spelling changes.
Co-Authored-By: Ragnor Comerford <ragnor.comerford@gmail.com>
* fix(MR-656): address Devin Review findings on /query and /change
Two issues raised by Devin Review on PR #110:
1. `POST /query` mutation-rejection error pointed at the deprecated
`/change` endpoint instead of the canonical `/mutate`. Fixed in
three places: the runtime error message in `server_query`, the
utoipa 400-response description, and the handler doc comment. The
`QueryRequest` schema docstrings in `api.rs` got the same update so
the openapi.json bodies match. Server and openapi tests updated.
2. `execute_change_remote` serialized `ChangeRequest` directly, which
emits the new canonical field names `query` / `name` on the wire.
`#[serde(alias = "query_source")]` only affects deserialization, so
a newer CLI talking to an older server would have its `/change`
POST body fail with "missing field: query_source". Fixed by
extracting a `legacy_change_request_body` helper that hand-rolls
the JSON with the legacy keys (`query_source` / `query_name`), the
same byte-stable contract `execute_read_remote` already uses
against `/read`. Added two unit tests on the helper to lock the
wire shape in.
Co-Authored-By: Ragnor Comerford <ragnor.comerford@gmail.com>
* docs(dev): RFC 001 — inline + stored queries, envelope, MCP
Tracked artifact consolidating the design across MR-656 (this branch),
MR-976 (Phase 1 envelope hardening parent, with MR-977/978/979/980
sub-issues), and MR-969 (stored queries + MCP).
Sections:
* Two paths, one engine — inline `/query` + `/mutate` (this PR) coexist
with stored `/queries/{name}` (MR-969). Same `run_query` / `run_mutate`
backend (the fold-in landed in the previous commit).
* Request envelope ("before") — Idempotency-Key, If-Match, X-Deadline,
X-Trace-Id, expect, dry_run, fields. Phase 1 ships the load-bearing
subset on `/mutate`.
* Response envelope ("after") — audit_id, snapshot_id, commit_id, stats,
warnings. Closes the provenance loop today's `ChangeOutput` leaves
open.
* `.gq` pragmas — `@description`, `@returns`, `@mcp`. Source-of-truth
for the stored-query agent contract; no separate YAML registry.
* Multi-graph MCP — per-graph `/graphs/{id}/mcp/tools` + `/mcp/invoke`.
Token binds to one graph by default; cross-graph agents loop.
* Cedar split — `read`/`change` for inline, `invoke_query` for stored.
Operators deny ad-hoc for agent groups while keeping curated tool
list open.
* Rejected alternatives — per-env override files, compiled bundles,
tool-name prefixing across graphs, body-field graph dispatch.
Index entry added under "Active Implementation Plans" so future agents
land on the RFC before touching queries / mutations / envelope code.
`scripts/check-agents-md.sh` clean (35 links, 34 docs).
* docs(server): clarify why run_query lacks AppState parameter
run_mutate takes state for workload admission; run_query doesn't because
reads aren't admission-gated today. Mark the asymmetry as intentional and
flag the two future events that would grow the signature: Phase 1's
`expect: { max_rows_scanned: N }` budget (MR-976) or per-actor admission
extending to stored-read invocations (MR-969). Prevents the natural
"make these symmetrical" follow-up.
* refactor(server): run_query / run_mutate take &ResolvedActor
Replace `Option<Extension<ResolvedActor>>` in the helpers with
`Option<&ResolvedActor>`. Saves MR-969's stored-query handler from
wrapping a bare actor in axum's `Extension(...)` before calling.
Handler signatures (`server_query`, `server_read`, `server_mutate`,
`server_change`) keep `Option<Extension<ResolvedActor>>` because that
is what axum injects, and unwrap at the call site with
`actor.as_ref().map(|Extension(actor)| actor)`.
Net: -13/+10 LOC, 89/0 server tests pass.
* docs(releases): v0.6.0 — describe inline + canonical-named queries (MR-656)
Extend the v0.6.0 release notes to cover the third piece of work landing
alongside the graph terminology rename and multi-graph server mode:
canonical-named `POST /query` and `POST /mutate` endpoints, the CLI's
new `-e/--query-string` flag, the top-level promotion of `lint` /
`check`, and the three-channel deprecation signal on `/read` and
`/change` (OpenAPI `deprecated: true` + RFC 9745 + RFC 8288).
Additions:
* Top blurb: "Two pieces" -> "Three pieces" with a bullet describing
the rename + inline flow.
* Breaking Changes: new "Query / mutation rename" subsection covering
the `ChangeRequest` field rename (with the back-compat serde aliases
and the CLI's `legacy_change_request_body` byte-stable wire helper)
and the `omnigraph query lint` -> `omnigraph lint` move.
* New: 5 bullets — the two endpoints, the CLI subcommands, the `-e`
flag, the deprecation signal channels, the widened `aliases.<name>.command`
vocabulary.
* User Impact: one bullet making explicit that the rename is cosmetic
on the client side and migration is voluntary.
* Documentation: pointers to the updated `server.md` / `cli.md` /
`cli-reference.md` and the new `docs/dev/rfc-001-queries-envelope-mcp.md`.
+15/-1 lines. `./scripts/check-agents-md.sh` clean.
* refactor(cli): demote `check` from visible_alias to deprecation shim
`omnigraph check` was a clap `visible_alias` on `lint`, advertised in
`--help` as an equivalent canonical name. Per MR-981 §6 (long-form
flags as canonical, short forms as visible aliases), visible aliases
on subcommand names hurt agent CX: agents emit either spelling
depending on training-data drift, and there's no length signal
pointing at the canonical name.
Changes:
* Remove `#[command(visible_alias = "check")]` from the `Lint` variant.
`omnigraph --help` now shows only `lint`.
* Add bare `check` to `rewrite_deprecated_argv` so `omnigraph check
<args>` still works — it rewrites to `omnigraph lint <args>` and
emits a one-line stderr deprecation warning, matching the existing
pattern for `read` / `change` / `query lint` / `query check`.
* Fix the nested `query check` shim to substitute `check` -> `lint` in
the rewritten argv (previously it relied on `check` being a
visible_alias to reach the `Lint` variant).
* New test `deprecated_check_top_level_rewrites_to_lint` covers: bare
`check` produces identical stdout to `lint`, emits the deprecation
warning, and `check` does NOT appear as an alias in `omnigraph
--help`.
* Release notes updated to reflect the deprecation-shim treatment and
cross-reference MR-981 §6 reasoning.
Cargo / Go users typing `check` still work indefinitely; one stderr
nudge per invocation teaches the canonical name. Agents see only
`lint` in `--help --json` so they emit one canonical form.
67/0 omnigraph-cli tests pass; 39 workspace test suites green.
---------
Co-authored-by: Devin AI <158243242+devin-ai-integration[bot]@users.noreply.github.com>
Co-authored-by: Ragnor Comerford <ragnor.comerford@gmail.com>
Co-authored-by: Ragnor Comerford <hello@ragnor.co>
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Ragnor Comerford
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fd41f798b7
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chore(codeowners): remove aaltshuler as owner | ||
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Ragnor Comerford
|
972a6e047b
|
chore(codeowners): add ragnorc as engineering owner | ||
|
Ragnor Comerford
|
cc2412dc65
|
Rename repo terminology to graph (#118)
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