nyx/CHANGELOG.md
Eli Peter 41128177d2
Release/0.5.0 (#35)
* feat: Introduce function-scoped variable interning for state analysis with new tests and fixtures

* feat: Add Phase 26 symbolic execution enhancements with bitwise operator support, abstract interpretation refinements, and new taint analysis tests

* feat: Refine state analysis to handle factory-pattern resource returns with mixed-path tests and leak detection enhancements

* feat: Add Phase 27 debug views with symbolic execution, abstract interpretation, SSA, and call graph viewers; integrate with debug layout and styles

* feat: Add Phase 31 type-qualified symbolic resolution with receiver-based callee disambiguation and testing

* feat: Extend symbolic execution with state iteration, enhanced debug views, and debounced input handling

* feat: Add Phase 13 resource and auth pattern extensions with new tests and fixtures

* feat: Introduce CFG debug graph renderer with compact mode, toolbar, and DAG layout integration

* feat: Add Phase 28 encoding and decoding transform modeling with structural symex enhancements and new taint analysis tests

* feat: Extend abstract interpretation with type facts and constant value tracking in debug views and server logic

* feat: Add linear path handling and witness extraction to symbolic execution with Phase 28 transform mismatch detection

* feat: Refine Go auth and sanitizer handling with enhanced rules, state updates, and benchmark improvements

* feat: Enable auth-state analysis by default and update relevant tests in benchmark config

* test: Update state_tests to reflect default enablement of auth-state analysis and add auth suppression test

* docs: update CHANGELOG.md

* feat: Introduce per-index taint tracking in `HeapState` with `HeapSlot`, overflow handling, and revised SSA transfers

* feat: Introduce C/C++ language labels and refine heap state tracking in SSA transfers

* feat: Implement per-index array slot tracking in symbolic heap with overflow collapse

* feat: Add implicit definition handling for uninitialized declarations in SSA value allocation

* feat: Refactor function parameters and constants for improved clarity and maintainability

* refactor: Reorder module imports and improve formatting for consistency

* refactor: Fix formatting erorrs

* refactor: Fix clippy warnings

* refactor: Fix fmt warnings (again)

* chore: Update dependencies and improve feature configuration

* Add comprehensive tests for undertested modules (#36) (COPILOT)

* Add comprehensive tests for undertested modules

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* Add comprehensive tests for ext, project, walk, and errors modules

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* chore: Update dependencies and improve feature configuration

* fix: formatting errors in new tests

* chore: Update license list in about.toml

* chore: made functions input inline

* chore: updated cfg graph to take up the full page

* chore: add Prettier configuration and update code formatting

* Add frontend test suite with Vitest (111 tests) (#37)

* Add Vitest test suite for frontend - 111 tests across utils, components, hooks, and graph utilities

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* ci: add frontend test step to CI workflow

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* chore: simplify array initialization in test files for consistency

* ran typecheck

* feat: add AnalysisWorkspace component and integrate it into CfgViewerPage

* feat: update routing in AppLayout and improve empty state message in ExplorerPage

* feat: enhance scan progress tracking with additional metrics and stages

* feat: update license information and add license check script

* feat: implement cross-file symbolic execution with callee body persistence

* feat: replace dagre graphs with Graphology + ELK + Sigma for more advanced call stack and cfg rendering

* feat: ensure CFG function view is scoped to the selected function, preventing bleed into sibling functions

* feat: enhance resource tracking with proxy method summaries and improve finding extraction

* feat: add terminal function exit detection for accurate resource leak analysis

* feat: add warnings for loops and functions without bodies to improve error recovery

* feat: update lambda expression handling to ensure proper function classification and control flow

* feat: remove bounded formatting/string ops and add JSON.parse sanitizer for improved data handling

* feat: add inline return taint analysis and regression tests for improved security checks

* feat: add engine version management and migration handling for database schema updates

* feat: enhance first_call_ident to skip nested function bodies and add regression tests

* feat: enhance callee name resolution with two-segment normalization and disambiguation

* feat: add cross-file context flags and debug assertions for taint analysis

* feat: refactor taint analysis structure to unify context handling and improve clarity

* feat: enhance dead code elimination to preserve Sink, Source, and Sanitizer labels with new tests

* docs: updated CHANGELOG.md

* fmt: formatting fixes

* fix: fixed frontend formatting and lint warnings

* fix: optimized ci

* fix: optimized ci

* Add comprehensive multi-file test coverage to Nyx (#38)

* Initial checklist for multi-file test suite expansion

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* Add 12 new multi-file test fixtures with TP/TN/near-miss coverage

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* deleted root repo

* rebuilt to test for regressions

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* feat: enhance import alias resolution and taint tracking

* feat: implement security hardening with CSRF protection and path validation

* feat: add support for import alias bindings in Python, PHP, and Rust

* feat: enhance CFG analysis modes and improve code readability

* feat: add detection for parameterized SQL queries to enhance security

* feat: add safe internal redirect handling and enhance session destroy validation

* feat: implement security improvements by addressing vulnerabilities in execAsync, session management, and file downloads

* feat: enhance taint detection by adding support for inline source member expressions in call arguments

* feat: implement pre-emission of Source nodes for inline source member expressions in call arguments

* feat: add support for Throw statement in control flow and error handling

* feat: add debug and echo endpoints with potential information leakage

* feat: implement internal redirect suppression and enhance taint detection

* feat: implement module alias tracking for dynamic dispatch in JS/TS

* feat: add authorization analysis module with Express support

* feat: add authorization analysis module with Express support

* feat: add tests for admin guard requirements and clean checks in authorization analysis

* feat: integrate Koa and Fastify frameworks into authorization analysis

* feat: add Flask and Django support to authorization analysis module

* feat: add support for Rails and Sinatra frameworks in authorization analysis

* feat: add support for Axum, ActixWeb, and Rocket frameworks in authorization analysis

* feat: add support for ActixWeb, Axum, and Rocket frameworks in authorization analysis

* feat: add support for Rails and Sinatra in authorization analysis

* chore: add .DS_Store to .gitignore

* refactor: simplify conditional checks and improve readability in multiple files

* refactor: update usage of Option methods for improved clarity and consistency

* refactor: improve code readability by simplifying conditional checks and formatting

* refactor: improve code formatting and readability by simplifying conditional checks

* refactor: simplify conditional checks and improve readability in multiple files

* refactor: simplify conditional checks in axum.rs for improved readability

* feat: add CodeQL analysis configuration for enhanced security scanning

* test: add comprehensive tests for `src/output.rs` SARIF builder (#39)

* chore: start test coverage improvement work

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* test: add comprehensive tests for src/output.rs SARIF builder

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* refactor: improve code formatting and readability in output.rs

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* refactor: improve code formatting and readability in output.rs

* Potential fix for code scanning alert no. 210: Uncontrolled data used in path expression

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* Potential fix for code scanning alert no. 211: Uncontrolled data used in path expression

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* refactor: enhance triage file path handling with improved error management and validation

* refactor: updated func summaries for richer detail

* refactor: update SSA summary extraction to use canonical FuncKey for distinct entries

* refactor: enhance callee metadata structure to support arity, receiver, and qualifier for better overload resolution

* refactor: add support for keyword arguments in function calls and enhance receiver extraction for method-style calls

* refactor: implement new Flask routes for safe and unsafe shell command execution

* refactor: separate receiver handling in SSA operations and enhance taint propagation

* refactor: improve arity handling by using arg_uses for positional argument count and enhance witness scoring for tainted arguments

* refactor: implement auth decorator extraction and classification for multiple languages

* refactor: enhance Rust module path resolution and use map handling for cross-file disambiguation

* refactor: introduce CalleeQuery struct for structured callee resolution and enhance resolver logic

* refactor: implement same-file identity collision handling for `runTask` to ensure correct resolver behavior

* refactor: standardize default struct initialization across multiple files

* feat: add scripts for formatting checks and auto-fixes with test summaries

* refactor: simplify character splitting and enhance namespace qualifier handling

* refactor: improve documentation clarity and enhance code readability in resolver logic

* refactor: replace default struct initialization with explicit field assignments for clarity

* feat: enhance anonymous function naming by deriving context-based bindings

* refactor: streamline match expressions for improved readability and performance

* refactor: streamline match expressions for improved readability and performance

* refactor: replace loop with while let for improved clarity and performance

* feat: add SSA constant propagation support to analysis context for improved accuracy

* feat: add SSA constant propagation support to analysis context for improved accuracy

* feat: implement shell metacharacter validation and bounded-length checks in Rust analysis

* feat: add static map analysis for command injection suppression and type safety

* refactor: simplify match statements and reduce line breaks for improved readability

* feat(summary): phase 1/5 SinkSite data model for primary sink-location attribution

Introduce SinkSite (file_rel, line, col, snippet, cap) carrying the
primary sink source-location through function summaries. Swap
SsaFuncSummary.param_to_sink and FuncSummary.param_to_sink from a coarse
Cap map to a deduped SmallVec<[SinkSite; 1]> per parameter, with a
backward-compatible cap_sites() helper and serde defaults so pre-phase-1
on-disk rows continue to deserialise cleanly.

Extraction: SinkSiteLocator bundles the tree/bytes/file_rel needed by
extract_ssa_func_summary; ParsedFile::extract_ssa_artifacts wires the
locator in for the persisted pass-1 path, while pass-2 intra-file
transient summaries fall back to cap-only sites (behavior unchanged).
Merge: GlobalSummaries::insert now unions sink sites with
(file_rel, line, col, cap) dedup via shared union_param_sink_sites
helper.

Database: JSON-serialised summary columns carry the new shape
automatically; no schema change needed.

Phase 2 will consume SinkSite in build_taint_diag() to overwrite the
caller-site Finding.line with the callee's sink line when resolved via
summary. Phase 1 keeps behavior unchanged: scanning
tests/benchmark/corpus/rust/cmdi/cmdi_indirect.rs still produces the
same (wrong) line 10 finding.

Adds round-trip tests covering SinkSite solo, SsaFuncSummary with sink
sites, legacy-JSON default handling for both summary types, and merge
dedup.

Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>

* feat(taint): phase 2/5 thread SinkSite into SsaTaintEvent and Finding

Plumb Phase 1's SinkSite through the event pipeline into Findings,
no output change yet.  SsaTaintEvent gains `primary_sink_site:
Option<SinkSite>`; when the main or callback sink-emission path has
non-empty `param_to_sink_sites`, filter to sites whose
`(line != 0) && (cap ∩ sink_caps != ∅)` and emit one event per
distinct site — the multi-primary collapse keeps each downstream
Finding single-primary.

Resolution: ResolvedSummary and SinkInfo gain mirror
`param_to_sink_sites` fields, populated from `SsaFuncSummary.param_to_sink`
(SSA + callback paths) and `FuncSummary.param_to_sink` (global paths).
Label, local-summary, and interop resolution paths leave the field
empty — they only ever had cap-level info to begin with.

Finding: new `primary_location: Option<SinkLocation>` with
`file_rel/line/col`.  `ssa_events_to_findings` maps
`event.primary_sink_site` → `Finding.primary_location`, filtering
cap-only sites (`line == 0`) to `None` so the (0,0) sentinel never
leaks to formatters.  Dedup key extended with the primary location
so multi-site events aren't collapsed back together.

Invariants (debug_assert!):
* every SinkSite reaching emission has `line != 0 && cap ∩ sink_caps
  != ∅` — enforced by the pick_primary_sink_sites* filters;
* every populated Finding.primary_location has `line != 0` AND
  non-empty `file_rel` — the cap-only → None translation upstream
  guarantees this.

Deliberately independent of `uses_summary`: that flag tracks whether
the *taint chain* used a summary, whereas primary attribution
requires only that the *sink* itself was summary-resolved.  A local
source reaching a cross-file sink produces `uses_summary=false`
alongside a populated primary_location — documented on
Finding.primary_location, covered by
`cross_file_sink_finding_carries_primary_location`.

build_taint_diag, SARIF/JSON/explanation formatters, and the
benchmark scorer remain untouched: finding.line still comes from
`cfg_graph[finding.sink]`, so cmdi_indirect.rs still reports line 10
and the benchmark's rs-cmdi-003 row still shows FN in the LOC column.

Tests: `cross_file_sink_finding_carries_primary_location` (proves
plumbing via a synthetic FuncSummary carrying a SinkSite at 42:5) and
`cross_file_sink_cap_only_site_leaves_primary_location_none`
(regression guard against cap-only sites surfacing).  All 1566 lib
tests + integration tests pass.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* feat(output): phase 3/5 consume primary sink location in diag + SARIF

When a finding's primary_location (populated in phase 2 from a callee
summary's SinkSite) names the dangerous instruction inside a callee
body, attribute the diagnostic line to that location instead of the
caller's call site. The call site is demoted to a Call step in
flow_steps, and a synthetic Sink step at the primary location is
appended so analysts still see the full trace.

Changes:
- Add scan_root parameter to build_taint_diag so file_rel can be
  resolved back to an absolute path via a shared resolve_file_rel
  helper. Empty file_rel (single-file scans where namespace == "")
  resolves to the file under analysis.
- Extend SinkLocation with snippet, carried from the upstream
  SinkSite so the formatter needs no second file read.
- Relax the ssa_events_to_findings debug_assert to allow empty
  file_rel, which is valid when scan root equals the file itself.
- SARIF: emit data-flow as codeFlows[0].threadFlows[0].locations[];
  locations[0] already reflects the primary sink position via the
  updated diag line/col.

Acceptance: scan on tests/benchmark/corpus/rust/cmdi/cmdi_indirect.rs
now reports line 5 (Command::new) as the primary sink, with the call
site at line 10 visible in flow_steps.

Two expect.json fixtures updated (must_match line_range widened):
- javascript/taint/context_sensitive_call: 12-14 -> 7-14 (line 8 is
  the real sink inside run()).
- rust/cfg/closure_async: 10-10 -> 10-11 (line 11 is Command::new
  inside the closure).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* feat(bench): phase 4/5 validate primary sink attribution across corpus

Extend the benchmark scorer and ground truth to lock in phase 3's
primary-location behavior, and add fixtures that exercise the new
capability end-to-end.

Scorer (tests/benchmark_test.rs):
- Add optional `expected_call_site_lines: Option<Vec<[usize; 2]>>` on
  Case. When present, score_location_level additionally requires at
  least one flow_step in the finding's evidence trace to fall within
  ±2 of the call-site range. When absent, the check is skipped —
  fully forward-compatible with existing fixtures.
- Retain ±2 tolerance on expected_sink_lines (compared against the
  now-primary Diag.line post-phase-3).

Ground truth edits:
- rs-cmdi-cross-001: expected_sink_lines [8,8] -> [9,9]. Line 8 is the
  transform::wrap call site (a cross-file propagator, not a sink);
  line 9 is Command::new, the real sink. The ±2 tolerance happened to
  mask this stale attribution but it was semantically wrong — phase 4
  is the right time to correct it. Also adds expected_call_site_lines
  [8,8] so the new field is exercised on an existing cross-file case.
- rs-cmdi-003: adds expected_call_site_lines [10,10] (run_cmd call).
  This fixture's sink (Command::new inside run_cmd at line 5) was the
  motivating case for phases 1-3; adding the call-site assertion
  guards against regression to caller-line attribution.

New fixtures:
- rust/cmdi/cmdi_indirect_multisink.rs (rs-cmdi-009): helper run_both
  takes two tainted params and invokes two Command sinks on
  consecutive lines. Locks in that primary line lands inside the
  helper (lines 5-6), not at the caller (line 12). Notes document
  that SinkSite is currently one-per-callee so both findings today
  collapse onto the first sink; expected_sink_lines=[5,6] and
  expected_call_site_lines=[12,12] stay valid either way.
- python/cmdi/cross_indirect_sink/{app.py,helper.py} (py-cmdi-cross-
  004): sink os.system lives in helper.py (cross-file), caller in
  app.py reads env source and calls run_cmd. Verifies phase 3's
  cross-file primary attribution: Diag.path = helper.py, Diag.line =
  5, with app.py:7 recorded in flow_steps as a Call step.

Acceptance:
- `cargo test --test benchmark_test -- --ignored --nocapture` passes.
- rs-cmdi-003 is TP/TP/TP (the target flip FN->TP at LOC). All
  pre-existing TP/TP/TP fixtures remain TP/TP/TP; 2 new fixtures are
  TP/TP/TP.
- Aggregate rule-level: TP=158 FP=10 FN=1 TN=97, P=0.940 R=0.994
  F1=0.966 on the 266-case corpus (was TP=156 FP=10 FN=1 TN=97 on
  264 pre-phase-4, delta is the +2 new cases both resolving TP).
- Full `cargo test` green (1566 lib tests + all integration tests).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* feat(taint): phase 5/5 lock Finding.primary_location contract via regression test

Add a regression test in src/taint/ssa_transfer.rs that wires up a synthetic
SsaFuncSummary with a SinkSite at other.rs:42:10 and drives the three
emission stages (pick_primary_sink_sites → emit_ssa_taint_events →
ssa_events_to_findings) against a minimal caller SSA body.  Asserts the
resulting Finding.primary_location is exactly that triple.

The existing integration tests in src/taint/tests.rs cover the coarse
FuncSummary path end-to-end through analyse_file.  This test locks in the
lower-level SSA-side plumbing so a future refactor that silently drops the
site between pick → emit → findings fails here rather than only at the
benchmark layer.

Also refreshes tests/benchmark/results/latest.json (timestamp only; rs-cmdi-003
remains TP/TP/TP and the aggregate P/R/F1 are unchanged from phase 4).

Closes the primary sink-location attribution feature (phases 1-5/5):
* Phase 1 — SinkSite data model on summaries.
* Phase 2 — SinkSite threaded into SsaTaintEvent and Finding.
* Phase 3 — diag + SARIF consume primary_location.
* Phase 4 — benchmark validates primary_call_site_lines across corpus.
* Phase 5 — regression test locks the event→finding contract.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* refactor: clean up formatting and improve readability in multiple files

* refactor: simplify type definition for deduplication key in findings

* test(harness): add must_not_match expectation for FP regression guards

Extends ExpectedFinding with must_not_match field that asserts a
diagnostic must NOT fire — presence is a hard failure. Non-consuming
scan so it coexists with must_match entries on the same rule_id.
Adds forbidden_violations accumulator and updates summary line.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* feat(regression): update expectations to ensure must_not_match for various taint and resource leak rules

* feat: implement auto-seeding for JS/TS handler parameters to enhance taint tracking

* feat: update switch statement handling to improve control flow analysis

* feat: implement promisify alias handling for JS/TS to enhance taint tracking

* feat: enhance taint tracking by refining expectation handling and adding mode filtering

* feat: refine SQL handling in stream processing and enhance auto-seeding for handler parameters

* feat: update taint tracking rules to enforce full mode matching and improve flow analysis

* feat: enhance Ruby subshell handling to improve taint tracking and flow analysis

* feat: update xss_response expectations to refine taint flow analysis and enhance regression guarding

* feat: refine framework detection and update expectation handling for Echo and Sinatra

* feat: implement max_count for taint tracking expectations and deduplicate findings

* feat: add strict_unexpected handling for taint-unsanitised-flow in expectation files

* feat: enhance deduplication of taint-unsanitised-flow findings by collapsing based on line and severity

* feat: add strict_unexpected handling for taint-unsanitised-flow in multiple expectation files

* feat: add structural invariant checks for SSA bodies

* feat: ensure deterministic phi emission order using BTreeSet

* feat: enhance handling of terminators to ensure authoritative flow through successor edges

* feat: enhance Goto terminator handling to ensure all successors are marked executable

* feat: refactor code for improved readability and organization

* feat: simplify predicate checks and enhance readability in SSA handling

* feat: implement per-file parse timeout and enhance file size handling

* feat: migrate analysis engine toggles from environment variables to configuration file

* feat: remove unnecessary whitespace in hostile_input_tests.rs

* feat: remove unnecessary whitespace in hostile_input_tests.rs

* feat: update dependencies and enhance documentation on language maturity

* feat: enhance security headers and improve request body limits

* feat: implement sink capability bits for deduplication and enhance evidence tagging

* feat: implement dynamic activation handling for gated sinks and enhance validation logic

* feat: enhance configuration documentation and clarify inline analysis cache behavior

* feat: implement panic recovery during analysis to continue scans past errors

* feat: add expectations configuration for taint analysis and performance metrics

* feat: enhance error handling and logging during file reading and mutex locking

* feat: add cross-file body loading tests and plumbing for CF-1 phase

* feat: implement cross-file k=1 context-sensitive inline taint analysis with new tests and fixtures

* feat: implement indexed-scan parity in cross-file inline analysis with new dropdown and copy functionality

* feat: enhance classification span handling in CFG and AST for improved source attribution

* feat: add new Express routes for handling user input and telemetry data

* feat: implement ternary expression handling in CFG with diamond structure for JS/TS

* feat: implement Phase CF-3 abstract-domain transfer channels in summaries

* feat: add support for string-prefix transfer in cross-file calls and update tests

* docs: reduce RESULTS.md doc size

* feat: implement Phase CF-4 per-return-path summary decomposition with tests

* feat: update parameter handling in pass1 and refactor SsaFuncSummary initialization

* feat: implement Phase CF-5 for cross-file SCC joint fixed-point convergence with new flags and tests

* feat: implement Phase CF-6 with parameter-granularity points-to summaries and associated tests

* refactor: update comments and documentation for clarity and consistency

* style: format code for consistency and readability

* refactor: simplify verdict handling and improve edge checking logic

* refactor: optimize path and identifier collection by avoiding unnecessary cloning

* chore: update Cargo.toml for Rust version 1.85 and add ignored files; modify CHANGELOG and README for clarity on state analysis defaults

* refactor: update documentation and improve clarity in configuration files

* refactor: update documentation and improve clarity in configuration files

* feat: add JS/TS pass-2 convergence tests and expectations configuration

* feat: add Phase 5 regression tests for inline cache origin attribution and update related logic

* feat: implement Phase 7 deduplication and alternative path linking for taint findings

* feat: implement structural DFS index for anonymous functions and update naming conventions

* feat: add Phase 8 regression tests for container-element taint in JS and Python

* feat: add engine-depth profiles and explain-engine option for CLI

* feat: update expectations and add new README fixtures for multi-file scan regression

* feat: implement Phase 11 callback-alias and factory patterns with regression tests

* feat: implement Terminator::Switch for multi-way dispatch and add regression tests

* feat: add real-CVE benchmark fixtures for CVE-2023-48022, CVE-2019-14939, and CVE-2023-26159 with corresponding patched variants

* refactor: extract cfg and ssa_transfer to submodules

* refactor: cargo fmt

* refactor: remove unnecessary blank line in cfg_tests.rs

* refactor: remove unnecessary planning file

* chore: update Rust version to 1.88 and bump dependencies in Cargo files

* feat: enhance triage UI with new layout and controls, update README for clarity

* feat: enhance triage UI with new layout and controls, update README for clarity

* chore: remove outdated section from README for version 0.5.0

* docs: improve clarity and consistency in README content

* chore: add "GPL-3.0-or-later" to license options in about.toml

* chore: update license handling in about.toml and check-licenses.mjs

* style: format code for improved readability in TriagePage component

* style: format code for improved readability in TriagePage component

* chore: enhance license handling and improve body_id scoping in seed lookup

* feat: introduce owner and parent body IDs for enhanced seed scoping

* feat: implement direction-aware engine provenance with new CLI flag for strict CI gating

* feat: add Undef SSA operation for improved control-flow handling

* style: improve code formatting for consistency and readability in multiple files

* feat: add 16-function chain SCC across multiple files for enhanced analysis

* style: simplify code formatting for improved readability in multiple files

* fix: update CapHitReason default implementation and improve README clarity

* docs: enhance README with detailed explanations of taint analysis and limitations

* docs: refine README for clarity and consistency in taint analysis section

* style: improve code formatting for better readability in NewScanModal and scans

* fix: update cargo-about command to use --offline for deterministic license generation

* fix: update cargo-about command to use --offline for deterministic license generation

* ci: add step to prime cargo registry cache for deterministic license generation

* feat: add support for non-sink collections in authorization analysis

* feat: enhance authorization checks with row-level ownership equality and binding tracking

* feat: implement self-scoped user handling and enhance ownership checks

* refactor: simplify assertions and formatting in authorization analysis tests

* fix: normalize line endings in THIRDPARTY-LICENSES.html generation and update README with AI disclosure

* docs: update AI disclosure section for clarity and conciseness

* feat: add AI Contribution Policy and update contributing guidelines for AI assistance disclosure

* feat: enhance authorization analysis with SSA-derived variable type classification

* feat: implement auth_finding_to_diag function for enhanced security diagnostics

* feat: add args_value_refs to CallSite struct for enhanced argument tracking

* feat: add args_value_refs to CallSite struct for enhanced argument tracking

* feat: add direction-aware engine provenance with LossDirection classification and new CLI flag

* feat: simplify strip_cap_from_call_args call by removing unnecessary line breaks

* feat: enhance error message handling in cli_validation_tests for better Windows compatibility

* feat: optimize release profile settings in Cargo.toml and update CodeQL configuration

* feat: enhance release build process with SBOM generation and SLSA provenance

* feat: update actions/checkout and actions/setup-node to v6, enhance CLI options, and improve auth-check summaries

* feat: introduce PathFact handling for path safety checks and rejection logic

* feat: introduce PathFact handling for path safety checks and rejection logic

* feat: update benchmark data and enhance path sanitization logic with new safety checks

* feat: document AI assistance in frontend UI development and human review process

* feat: add return path facts for enhanced path safety checks and update documentation

* chore: update release date for version 0.5.0 in CHANGELOG.md

* chore: clean up ci.yml by removing outdated comments and clarifying steps

* feat: implement cross-language path sanitizers and validators for enhanced security

* feat: enhance SSA value usage tracking by including block terminators and improve path safety checks

* feat: enhance switch statement handling by adding per-case path constraints and support for exclusive cases

* refactor: simplify conditional formatting and improve code readability in executor and lower modules

* feat: add vulnerable examples for various languages demonstrating authentication and sanitization issues

* feat: enhance actor context recognition for self-actor identifiers and add support for global non-sink receivers

* feat: enhance actor context recognition for self-actor identifiers and add support for global non-sink receivers

* feat: add transform classifiers for Java, Go, and Ruby with corresponding tests

* refactor: clarify comments on reassign-to-constant idiom and sink behavior in guards.rs

---------

Co-authored-by: Copilot <198982749+Copilot@users.noreply.github.com>
Co-authored-by: Copilot Autofix powered by AI <62310815+github-advanced-security[bot]@users.noreply.github.com>
Co-authored-by: Claude Opus 4.7 <noreply@anthropic.com>
2026-04-25 17:59:11 -04:00

16 KiB

Changelog

All notable changes to Nyx are documented here. The format is based on Keep a Changelog and the project follows Semantic Versioning. For where Nyx is going, see the Roadmap.

[Unreleased]

No changes yet.

[0.5.0] — 2026-04-24

The biggest release since launch. The taint engine was rebuilt on top of an SSA IR, cross-file analysis was deepened across the board, and Nyx now ships a local web UI for triaging findings without leaving your machine.

Heads-up: false positives or regressions on cross-file flows are possible. Please open an issue with a minimal reproduction if you hit one.

Highlights

  • New SSA-based taint engine. Block-level worklist analysis over a pruned SSA IR, replacing the legacy BFS engine across all 10 languages. More precise, easier to extend, and the foundation for everything else in this release.
  • Cross-file analysis. Function summaries (including the new SSA summaries) flow across files via SQLite-backed persistence. Callee bodies can be inlined for context-sensitive analysis (k=1) and walked symbolically across file boundaries.
  • Symbolic execution layer. Candidate findings are walked symbolically from source to sink, producing concrete attack witnesses, pruning infeasible paths, and (optionally) handing constraints off to Z3.
  • Local web UI (nyx serve). React + Vite frontend for browsing findings, viewing flow paths, and triaging results. Triage decisions persist to .nyx/triage.json so they version with your code.
  • Hostile-repo hardening. Path containment, loopback-only serving, CSRF tokens, bounded artifact reads. Safe to run on untrusted code.
  • Tighter false-positive controls. Type-aware sink suppression, abstract interpretation (intervals + string prefixes), constraint solving, allowlist and type-check guard recognition, and confidence scoring on every finding.

Engine

  • SSA IR with dominance-frontier phi insertion. The optimization pipeline runs constant propagation, branch pruning, copy propagation, alias analysis, DCE, type facts, and points-to in sequence.
  • Multi-label classification — a single API can carry both Source and Sink labels (e.g. PHP file_get_contents, Java readObject).
  • Gated sinks — setAttribute, parseFromString, etc. only activate when the constant attribute argument is dangerous, and only the payload argument is treated as taint-bearing.
  • Container taint with per-index precision and bounded points-to. Aliased containers share heap identity correctly.
  • Loop-aware analysis: induction-variable pruning, widening at loop heads, bounded unrolling in symex.
  • Path-sensitive phi evaluation propagates validation when all tainted predecessors are guarded.
  • Per-return-path summaries decompose function effects when paths produce different taint behavior.
  • Cross-file SCC fixed-point — mutually recursive functions across files now reach a joint convergence.
  • Demand-driven backwards analysis (off by default) annotates findings with cutoff diagnostics.
  • Direction-aware engine notes (UnderReport, OverReport, Bail) flow into confidence scoring, ranking, and the new --require-converged strict mode.

Symbolic Execution

  • Expression trees (SymbolicValue) preserve computation structure through the path walk: integers, strings, binary ops, concatenations, calls, phi merges.
  • Witness strings reconstruct concrete attack payloads at sink nodes.
  • Bounded multi-path forking with reachability pruning.
  • Cross-file: callee summaries are modeled directly, and pre-lowered callee bodies are loaded from SQLite so witnesses can keep walking across files.
  • Interprocedural mode: nested frames with full state propagation, transitive descent up to 3 levels, structured cutoff tracking.
  • Field-sensitive symbolic heap with bounded fields per object.
  • Symbolic string theory: Substr, Replace, ToLower, ToUpper, Trim, StrLen modeled with concrete folding and sanitizer pattern detection.
  • Optional Z3 integration (compile-time smt feature) for cross-variable constraint solving.

Security & Coverage

  • Vulnerability classes added: SSRF (10 languages), deserialization (Python, Ruby, Java, PHP), and Cap::UNAUTHORIZED_ID for auth-as-taint (off by default behind config flag).
  • Auth analysis: receiver-type sink gating, row-level ownership-equality detection, self-actor recognition (let user = require_auth()), sink classification (in-memory vs realtime vs outbound), helper-summary lifting, and SQL JOIN-through-ACL recognition.
  • State analysis (resource lifecycle, use-after-close, leaks, unauthed access) is now on by default. RAII-aware for Rust and C++; recognizes Python with, Go defer, Java try-with-resources.
  • Framework rule packs: Express, Flask/Django, Spring/JNDI, Rails. Per-language label depth significantly expanded.
  • C/C++ taint depth: output-parameter source propagation, implicit definitions for uninitialized declarations.
  • Negative test corpus (30 fixtures) and a 262-case benchmark with CI gates on rule-level Precision/Recall/F1.

CLI & Output

  • nyx serve — local web UI on localhost only (refuses non-loopback binds).
  • --require-converged filters out findings where the engine bailed early.
  • Analysis-engine toggles graduated from NYX_* env vars to first-class flags and [analysis.engine] config: --constraint-solving, --abstract-interp, --context-sensitive, --symex, --cross-file-symex, --symex-interproc, --smt, --parse-timeout-ms. Old env vars still work when Nyx is consumed as a library.
  • Confidence (High/Medium/Low) shown on every finding, including console headers.
  • Engine notes surfaced in console ([capped: N notes — over-report]), JSON (engine_notes, confidence_capped), and SARIF (result.properties.loss_direction).
  • Flow paths reconstructed step-by-step with file/line/snippet for each hop.
  • Concrete attack witness strings synthesized by the symbolic executor.
  • Primary sink locations now point at the callee's real sink line; caller call sites are preserved as flow steps.
  • Richer scan progress: explicit stages, timing breakdowns, language counters, skipped/reused file counts.
  • Tighter taint-finding deduplication.

Hardening

  • Centralized path containment rejects traversal, symlink escapes, and oversized reads across UI, debug, and triage routes.
  • nyx serve validates Host headers, requires per-session CSRF tokens for mutations, and refuses scans outside the original repo root.
  • Walker re-validates symlink targets against the scan root.
  • Bounded reads on framework manifests and .nyx/triage.json imports.
  • UI falls back to plain text on pathologically long lines to defeat regex-DoS in syntax highlighting.
  • Parser timeout is now configuration-backed with hostile-input regression coverage.

Persistence

  • SQLite schema bumped to v2. Anonymous-function identity is now a structural DFS index instead of a byte offset, so inserting a line above an unchanged function no longer invalidates its FuncKey. Pre-0.5.0 caches are silently cleared on open; triage data and scan history are preserved.
  • Engine-version metadata; persisted summaries and file hashes invalidate on mismatch.
  • Stale SSA tables recreate when required columns are missing; deserialization failures log instead of silently dropping rows.

Frontend

  • Replaced the legacy app.js with a React + Vite + TypeScript SPA.
  • Interactive graph workspace for CFG and call-graph views (Graphology + ELK + Sigma) with neighborhood reduction and a full-page inspector.
  • Triage UI with database-backed decisions (true positive, false positive, deferred, suppressed) and .nyx/triage.json round-trip.
  • Scan history, rules management, and finding detail panels with evidence and flow visualization.
  • Vitest browser-side test suite wired into CI.

Removed

  • Legacy BFS taint engine, TaintTransfer, TaintState, and the NYX_LEGACY fallback.
  • Legacy vanilla-JS frontend (app.js).

[0.4.0] — 2025-02-25

A precision and ergonomics release. Findings are now ranked, lower-noise by default, and easier to triage in CI.

Highlights

  • Attack-surface ranking. Every finding gets an exploitability score combining severity, analysis kind, evidence strength, and path-validation. Console output shows the score in the header line; --no-rank opts out.
  • Low-noise prioritization. Quality-category findings are excluded by default (--include-quality brings them back). High-frequency Quality rules are rolled up per (file, rule) with example occurrences. LOW budgets cap noise without ever displacing High/Medium findings.
  • State-model dataflow analysis. New per-variable resource-lifecycle and auth-level analysis catches use-after-close, double-close, must-leak, may-leak (branch-aware), and unauthenticated-sink access. Opt-in via scanner.enable_state_analysis.
  • Inline nyx:ignore suppressions with same-line and next-line directives, comma lists, wildcard suffixes, and string-literal guards across all 10 languages.
  • AST pattern overhaul. All 10 language pattern files rewritten with consistent metadata, namespaced IDs (<lang>.<category>.<specific>), and 30+ new patterns. 11 broken tree-sitter queries fixed.
  • Monotone forward-dataflow taint engine. Replaced the BFS engine with a proper worklist over a finite lattice. Termination is now guaranteed by lattice height, eliminating BFS-budget bailouts on large files.
  • Path-sensitive taint analysis. Branch predicates flow with the analysis. Contradictory guards prune infeasible paths; validation calls produce annotated findings without changing severity.
  • Interprocedural call graph. Whole-program graph with three-valued callee resolution (Resolved/NotFound/Ambiguous), SCC analysis, and topo ordering ready for bottom-up taint propagation.

CLI & Output

  • --severity <EXPR> replaces --high-only. Supports HIGH, HIGH,MEDIUM, >=MEDIUM. Filtering is now applied at the output stage so taint and CFG findings are correctly downgraded too.
  • --mode <full|ast|cfg|taint> replaces --ast-only and --cfg-only.
  • --index <auto|off|rebuild> replaces --no-index and --rebuild-index.
  • --fail-on <SEVERITY> for CI exit-code gating.
  • --min-score <N> for ranking-aware filtering.
  • --show-suppressed reveals suppressed findings dimmed with [SUPPRESSED].
  • --keep-nonprod-severity (renamed from --include-nonprod).
  • --quiet mirrors output.quiet.
  • Console renderer overhauled: severity is the strongest visual anchor, file paths are dim blue, taint flows use arrows, multi-line call chains are normalized.
  • Confidence shown alongside score in the header line.
  • Pattern-level confidence is now set at the pattern definition site, not heuristically inferred from severity.

Breaking

  • Config and data directory renamed from dev.ecpeter23.nyx to nyx. Existing config and SQLite indexes at the old path won't be picked up — copy them across or re-run nyx scan.
  • Severity::from_str now returns Err for unknown values instead of silently defaulting to Low.

Notable Fixes

  • KINDS-map audit across all 10 languages: 89 missing tree-sitter node types added. Switch/case, try/catch/finally, class bodies, lambdas, closures, and namespaces are no longer silently dropped.
  • else_clause mapping fixed for C, C++, Rust, JS, TS, Python, PHP — code inside else blocks was being dropped from the CFG.
  • Rust if let / while let taint propagation now works.
  • Taint BFS non-termination on large JS files (the BFS engine has since been replaced).
  • C++ popen pattern ID collision with C.
  • Constant-arg sink suppression for AST patterns.

[0.3.0] — 2026-02-25

Configurability, SARIF, and an aggressive false-positive purge.

Highlights

  • Configurable analysis rules. Sources, sanitizers, sinks, terminators, and event handlers can be defined per language in nyx.local or via nyx config add-rule/add-terminator. Config rules take priority over built-in rules.
  • nyx config CLI subcommand with show, path, add-rule, add-terminator.
  • SARIF 2.1.0 output (-f sarif). Spec-compliant for GitHub Code Scanning, Azure DevOps, and other SARIF consumers.
  • SourceKind taint classification. Findings carry an inferred source kind (UserInput, EnvironmentConfig, FileSystem, Database, Unknown) and severity is now derived from it instead of being hardcoded to High.
  • Non-prod severity downgrade by default. Findings in tests, vendor, benchmarks, examples, fixtures, build scripts, and *.min.js are downgraded one tier. --include-nonprod restores original severity.
  • Resource leak detection for Python, Ruby, PHP, JavaScript, and TypeScript (file handles, sockets, locks, mysqli, curl, fs streams).
  • Progress bars and quiet mode. Indicatif-driven progress for discovery, Pass 1, and Pass 2 (auto-hidden in JSON/SARIF/quiet modes).

Performance

  • Single fused parse+CFG pass replaces the previous two-parse summary extraction.
  • Light-weight dataflow sweep in CFG builder is now O(N) per function instead of O(N²) over the whole file.
  • Parallel summary merging via rayon fold/reduce.
  • Indexed scans now read and hash each file once instead of up to 4 times.
  • SQLite mutex mode relaxed (r2d2 + WAL provides safety without global lock).
  • Zero-allocation taint hashing and in-place taint transfer.

Notable Fixes

  • One-hop constant-binding suppression: cmd = "git"; subprocess.run([cmd, ...]) no longer flags.
  • Exec-path guards (which, resolve_binary, shutil.which) recognized.
  • signal.connect / event.connect no longer match Python db-connection acquire patterns.
  • threading.Lock() without .acquire() no longer flags as unreleased.
  • FileResponse(f) / send_file(f) recognized as ownership transfer.
  • el.href no longer matches location.href patterns.
  • Constant-only sink calls (subprocess.run(["make","clean"])) suppressed.
  • std::cout no longer treated as a sink.
  • Break/continue inside loops correctly wires into the loop header/exit, fixing false unreachable-code findings.
  • Preprocessor #ifdef/#endif blocks no longer orphan subsequent code in C/C++.
  • freopen no longer matches fopen acquire patterns.
  • Struct-field, linked-list, and global assignment recognized as ownership transfers.

[0.2.0] — 2026-02-24

The cross-file release.

  • Two-pass cross-file taint analysis. Pass 1 extracts FuncSummary per function (caps, propagation, callees), Pass 2 runs BFS taint propagation with cross-file callee resolution.
  • CFG analysis engine with five detectors: unguarded sinks, auth gaps in web handlers, unreachable security code, error fallthrough, resource leaks.
  • Cross-language interop via explicit InteropEdge structs (no false-positive name collisions).
  • Function summaries persisted to SQLite (function_summaries table).
  • Multi-language CFG + taint support for all 10 languages.
  • Resource leak detection for C/C++, Go, Rust, and Java.
  • Finding scoring system combining severity, entry-point proximity, path complexity, taint confirmation, and confidence.
  • Analysis modes: Full (default), Ast (--ast-only), Taint (--cfg-only).
  • Cap bitflags expanded: ENV_VAR, HTML_ESCAPE, SHELL_ESCAPE, URL_ENCODE, JSON_PARSE, FILE_IO.
  • Performance: read-once/hash-once via _from_bytes variants, lock-free rayon, SQLite WAL + 8 MB cache + 256 MB mmap.
  • Tracing instrumentation on all pipeline stages; criterion benchmark suite.

[0.2.0-alpha] — 2025-06-28

  • Experimental intra-procedural CFG + taint analysis for Rust. Builds a CFG, applies dataflow, and flags unsanitised Source → Sink paths (e.g. env::varCommand::new).
  • O(1) node-kind lookup via per-language PHF tables.
  • Debug channel target=cfg (RUST_LOG=nyx::cfg=debug) to inspect generated graphs.
  • Fixed Windows release pipeline (PowerShell has no zip command).

[0.1.1-alpha] — 2025-06-25

  • Fixed scan --no-index not respecting the max_results config setting (#1).
  • Integration tests covering indexing and scanning pipelines (#3, #4, #5, #8).

[0.1.0-alpha] — 2025-06-25

Initial alpha release.

  • Multi-language AST pattern scanning via tree-sitter for Rust, C/C++, Java, Go, PHP, Python, Ruby, TypeScript, JavaScript.
  • scan command: filesystem walker, pattern execution, console output.
  • index command: build, rebuild, and status reporting of SQLite-backed index.
  • list command: list indexed projects with optional verbosity.
  • clean command: remove one or all project indexes.
  • Configuration system with nyx.conf (generated) and nyx.local (user overrides).
  • Default severity levels: High, Medium, Low.