* feat: Introduce function-scoped variable interning for state analysis with new tests and fixtures * feat: Add Phase 26 symbolic execution enhancements with bitwise operator support, abstract interpretation refinements, and new taint analysis tests * feat: Refine state analysis to handle factory-pattern resource returns with mixed-path tests and leak detection enhancements * feat: Add Phase 27 debug views with symbolic execution, abstract interpretation, SSA, and call graph viewers; integrate with debug layout and styles * feat: Add Phase 31 type-qualified symbolic resolution with receiver-based callee disambiguation and testing * feat: Extend symbolic execution with state iteration, enhanced debug views, and debounced input handling * feat: Add Phase 13 resource and auth pattern extensions with new tests and fixtures * feat: Introduce CFG debug graph renderer with compact mode, toolbar, and DAG layout integration * feat: Add Phase 28 encoding and decoding transform modeling with structural symex enhancements and new taint analysis tests * feat: Extend abstract interpretation with type facts and constant value tracking in debug views and server logic * feat: Add linear path handling and witness extraction to symbolic execution with Phase 28 transform mismatch detection * feat: Refine Go auth and sanitizer handling with enhanced rules, state updates, and benchmark improvements * feat: Enable auth-state analysis by default and update relevant tests in benchmark config * test: Update state_tests to reflect default enablement of auth-state analysis and add auth suppression test * docs: update CHANGELOG.md * feat: Introduce per-index taint tracking in `HeapState` with `HeapSlot`, overflow handling, and revised SSA transfers * feat: Introduce C/C++ language labels and refine heap state tracking in SSA transfers * feat: Implement per-index array slot tracking in symbolic heap with overflow collapse * feat: Add implicit definition handling for uninitialized declarations in SSA value allocation * feat: Refactor function parameters and constants for improved clarity and maintainability * refactor: Reorder module imports and improve formatting for consistency * refactor: Fix formatting erorrs * refactor: Fix clippy warnings * refactor: Fix fmt warnings (again) * chore: Update dependencies and improve feature configuration * Add comprehensive tests for undertested modules (#36) (COPILOT) * Add comprehensive tests for undertested modules Co-authored-by: elicpeter <54954007+elicpeter@users.noreply.github.com> Agent-Logs-Url: https://github.com/elicpeter/nyx/sessions/f3fc877e-f386-49ba-9793-fc93d3805083 * Add comprehensive tests for ext, project, walk, and errors modules Co-authored-by: elicpeter <54954007+elicpeter@users.noreply.github.com> Agent-Logs-Url: https://github.com/elicpeter/nyx/sessions/f3fc877e-f386-49ba-9793-fc93d3805083 --------- Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com> Co-authored-by: elicpeter <54954007+elicpeter@users.noreply.github.com> * chore: Update dependencies and improve feature configuration * fix: formatting errors in new tests * chore: Update license list in about.toml * chore: made functions input inline * chore: updated cfg graph to take up the full page * chore: add Prettier configuration and update code formatting * Add frontend test suite with Vitest (111 tests) (#37) * Add Vitest test suite for frontend - 111 tests across utils, components, hooks, and graph utilities Co-authored-by: elicpeter <54954007+elicpeter@users.noreply.github.com> Agent-Logs-Url: https://github.com/elicpeter/nyx/sessions/7cf0dba2-ecff-4740-ba4d-92717e74a0b7 * ci: add frontend test step to CI workflow Co-authored-by: elicpeter <54954007+elicpeter@users.noreply.github.com> Agent-Logs-Url: https://github.com/elicpeter/nyx/sessions/5bc0ac9f-0a32-4d03-9cb7-7a15aea53fca --------- Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com> Co-authored-by: elicpeter <54954007+elicpeter@users.noreply.github.com> * chore: simplify array initialization in test files for consistency * ran typecheck * feat: add AnalysisWorkspace component and integrate it into CfgViewerPage * feat: update routing in AppLayout and improve empty state message in ExplorerPage * feat: enhance scan progress tracking with additional metrics and stages * feat: update license information and add license check script * feat: implement cross-file symbolic execution with callee body persistence * feat: replace dagre graphs with Graphology + ELK + Sigma for more advanced call stack and cfg rendering * feat: ensure CFG function view is scoped to the selected function, preventing bleed into sibling functions * feat: enhance resource tracking with proxy method summaries and improve finding extraction * feat: add terminal function exit detection for accurate resource leak analysis * feat: add warnings for loops and functions without bodies to improve error recovery * feat: update lambda expression handling to ensure proper function classification and control flow * feat: remove bounded formatting/string ops and add JSON.parse sanitizer for improved data handling * feat: add inline return taint analysis and regression tests for improved security checks * feat: add engine version management and migration handling for database schema updates * feat: enhance first_call_ident to skip nested function bodies and add regression tests * feat: enhance callee name resolution with two-segment normalization and disambiguation * feat: add cross-file context flags and debug assertions for taint analysis * feat: refactor taint analysis structure to unify context handling and improve clarity * feat: enhance dead code elimination to preserve Sink, Source, and Sanitizer labels with new tests * docs: updated CHANGELOG.md * fmt: formatting fixes * fix: fixed frontend formatting and lint warnings * fix: optimized ci * fix: optimized ci * Add comprehensive multi-file test coverage to Nyx (#38) * Initial checklist for multi-file test suite expansion Agent-Logs-Url: https://github.com/elicpeter/nyx/sessions/e550cb88-9767-4442-94d4-101bf5bb0e23 Co-authored-by: elicpeter <54954007+elicpeter@users.noreply.github.com> * Add 12 new multi-file test fixtures with TP/TN/near-miss coverage Agent-Logs-Url: https://github.com/elicpeter/nyx/sessions/e550cb88-9767-4442-94d4-101bf5bb0e23 Co-authored-by: elicpeter <54954007+elicpeter@users.noreply.github.com> * deleted root repo * rebuilt to test for regressions --------- Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com> Co-authored-by: elicpeter <54954007+elicpeter@users.noreply.github.com> Co-authored-by: elipeter <elicpeter@gmail.com> * feat: enhance import alias resolution and taint tracking * feat: implement security hardening with CSRF protection and path validation * feat: add support for import alias bindings in Python, PHP, and Rust * feat: enhance CFG analysis modes and improve code readability * feat: add detection for parameterized SQL queries to enhance security * feat: add safe internal redirect handling and enhance session destroy validation * feat: implement security improvements by addressing vulnerabilities in execAsync, session management, and file downloads * feat: enhance taint detection by adding support for inline source member expressions in call arguments * feat: implement pre-emission of Source nodes for inline source member expressions in call arguments * feat: add support for Throw statement in control flow and error handling * feat: add debug and echo endpoints with potential information leakage * feat: implement internal redirect suppression and enhance taint detection * feat: implement module alias tracking for dynamic dispatch in JS/TS * feat: add authorization analysis module with Express support * feat: add authorization analysis module with Express support * feat: add tests for admin guard requirements and clean checks in authorization analysis * feat: integrate Koa and Fastify frameworks into authorization analysis * feat: add Flask and Django support to authorization analysis module * feat: add support for Rails and Sinatra frameworks in authorization analysis * feat: add support for Axum, ActixWeb, and Rocket frameworks in authorization analysis * feat: add support for ActixWeb, Axum, and Rocket frameworks in authorization analysis * feat: add support for Rails and Sinatra in authorization analysis * chore: add .DS_Store to .gitignore * refactor: simplify conditional checks and improve readability in multiple files * refactor: update usage of Option methods for improved clarity and consistency * refactor: improve code readability by simplifying conditional checks and formatting * refactor: improve code formatting and readability by simplifying conditional checks * refactor: simplify conditional checks and improve readability in multiple files * refactor: simplify conditional checks in axum.rs for improved readability * feat: add CodeQL analysis configuration for enhanced security scanning * test: add comprehensive tests for `src/output.rs` SARIF builder (#39) * chore: start test coverage improvement work Agent-Logs-Url: https://github.com/elicpeter/nyx/sessions/cd7ff398-134e-4728-a5e7-0353a0744423 Co-authored-by: elicpeter <54954007+elicpeter@users.noreply.github.com> * test: add comprehensive tests for src/output.rs SARIF builder Agent-Logs-Url: https://github.com/elicpeter/nyx/sessions/cd7ff398-134e-4728-a5e7-0353a0744423 Co-authored-by: elicpeter <54954007+elicpeter@users.noreply.github.com> * refactor: improve code formatting and readability in output.rs --------- Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com> Co-authored-by: elicpeter <54954007+elicpeter@users.noreply.github.com> Co-authored-by: elipeter <elicpeter@gmail.com> * refactor: improve code formatting and readability in output.rs * Potential fix for code scanning alert no. 210: Uncontrolled data used in path expression Co-authored-by: Copilot Autofix powered by AI <62310815+github-advanced-security[bot]@users.noreply.github.com> * Potential fix for code scanning alert no. 211: Uncontrolled data used in path expression Co-authored-by: Copilot Autofix powered by AI <62310815+github-advanced-security[bot]@users.noreply.github.com> * refactor: enhance triage file path handling with improved error management and validation * refactor: updated func summaries for richer detail * refactor: update SSA summary extraction to use canonical FuncKey for distinct entries * refactor: enhance callee metadata structure to support arity, receiver, and qualifier for better overload resolution * refactor: add support for keyword arguments in function calls and enhance receiver extraction for method-style calls * refactor: implement new Flask routes for safe and unsafe shell command execution * refactor: separate receiver handling in SSA operations and enhance taint propagation * refactor: improve arity handling by using arg_uses for positional argument count and enhance witness scoring for tainted arguments * refactor: implement auth decorator extraction and classification for multiple languages * refactor: enhance Rust module path resolution and use map handling for cross-file disambiguation * refactor: introduce CalleeQuery struct for structured callee resolution and enhance resolver logic * refactor: implement same-file identity collision handling for `runTask` to ensure correct resolver behavior * refactor: standardize default struct initialization across multiple files * feat: add scripts for formatting checks and auto-fixes with test summaries * refactor: simplify character splitting and enhance namespace qualifier handling * refactor: improve documentation clarity and enhance code readability in resolver logic * refactor: replace default struct initialization with explicit field assignments for clarity * feat: enhance anonymous function naming by deriving context-based bindings * refactor: streamline match expressions for improved readability and performance * refactor: streamline match expressions for improved readability and performance * refactor: replace loop with while let for improved clarity and performance * feat: add SSA constant propagation support to analysis context for improved accuracy * feat: add SSA constant propagation support to analysis context for improved accuracy * feat: implement shell metacharacter validation and bounded-length checks in Rust analysis * feat: add static map analysis for command injection suppression and type safety * refactor: simplify match statements and reduce line breaks for improved readability * feat(summary): phase 1/5 SinkSite data model for primary sink-location attribution Introduce SinkSite (file_rel, line, col, snippet, cap) carrying the primary sink source-location through function summaries. Swap SsaFuncSummary.param_to_sink and FuncSummary.param_to_sink from a coarse Cap map to a deduped SmallVec<[SinkSite; 1]> per parameter, with a backward-compatible cap_sites() helper and serde defaults so pre-phase-1 on-disk rows continue to deserialise cleanly. Extraction: SinkSiteLocator bundles the tree/bytes/file_rel needed by extract_ssa_func_summary; ParsedFile::extract_ssa_artifacts wires the locator in for the persisted pass-1 path, while pass-2 intra-file transient summaries fall back to cap-only sites (behavior unchanged). Merge: GlobalSummaries::insert now unions sink sites with (file_rel, line, col, cap) dedup via shared union_param_sink_sites helper. Database: JSON-serialised summary columns carry the new shape automatically; no schema change needed. Phase 2 will consume SinkSite in build_taint_diag() to overwrite the caller-site Finding.line with the callee's sink line when resolved via summary. Phase 1 keeps behavior unchanged: scanning tests/benchmark/corpus/rust/cmdi/cmdi_indirect.rs still produces the same (wrong) line 10 finding. Adds round-trip tests covering SinkSite solo, SsaFuncSummary with sink sites, legacy-JSON default handling for both summary types, and merge dedup. Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com> * feat(taint): phase 2/5 thread SinkSite into SsaTaintEvent and Finding Plumb Phase 1's SinkSite through the event pipeline into Findings, no output change yet. SsaTaintEvent gains `primary_sink_site: Option<SinkSite>`; when the main or callback sink-emission path has non-empty `param_to_sink_sites`, filter to sites whose `(line != 0) && (cap ∩ sink_caps != ∅)` and emit one event per distinct site — the multi-primary collapse keeps each downstream Finding single-primary. Resolution: ResolvedSummary and SinkInfo gain mirror `param_to_sink_sites` fields, populated from `SsaFuncSummary.param_to_sink` (SSA + callback paths) and `FuncSummary.param_to_sink` (global paths). Label, local-summary, and interop resolution paths leave the field empty — they only ever had cap-level info to begin with. Finding: new `primary_location: Option<SinkLocation>` with `file_rel/line/col`. `ssa_events_to_findings` maps `event.primary_sink_site` → `Finding.primary_location`, filtering cap-only sites (`line == 0`) to `None` so the (0,0) sentinel never leaks to formatters. Dedup key extended with the primary location so multi-site events aren't collapsed back together. Invariants (debug_assert!): * every SinkSite reaching emission has `line != 0 && cap ∩ sink_caps != ∅` — enforced by the pick_primary_sink_sites* filters; * every populated Finding.primary_location has `line != 0` AND non-empty `file_rel` — the cap-only → None translation upstream guarantees this. Deliberately independent of `uses_summary`: that flag tracks whether the *taint chain* used a summary, whereas primary attribution requires only that the *sink* itself was summary-resolved. A local source reaching a cross-file sink produces `uses_summary=false` alongside a populated primary_location — documented on Finding.primary_location, covered by `cross_file_sink_finding_carries_primary_location`. build_taint_diag, SARIF/JSON/explanation formatters, and the benchmark scorer remain untouched: finding.line still comes from `cfg_graph[finding.sink]`, so cmdi_indirect.rs still reports line 10 and the benchmark's rs-cmdi-003 row still shows FN in the LOC column. Tests: `cross_file_sink_finding_carries_primary_location` (proves plumbing via a synthetic FuncSummary carrying a SinkSite at 42:5) and `cross_file_sink_cap_only_site_leaves_primary_location_none` (regression guard against cap-only sites surfacing). All 1566 lib tests + integration tests pass. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat(output): phase 3/5 consume primary sink location in diag + SARIF When a finding's primary_location (populated in phase 2 from a callee summary's SinkSite) names the dangerous instruction inside a callee body, attribute the diagnostic line to that location instead of the caller's call site. The call site is demoted to a Call step in flow_steps, and a synthetic Sink step at the primary location is appended so analysts still see the full trace. Changes: - Add scan_root parameter to build_taint_diag so file_rel can be resolved back to an absolute path via a shared resolve_file_rel helper. Empty file_rel (single-file scans where namespace == "") resolves to the file under analysis. - Extend SinkLocation with snippet, carried from the upstream SinkSite so the formatter needs no second file read. - Relax the ssa_events_to_findings debug_assert to allow empty file_rel, which is valid when scan root equals the file itself. - SARIF: emit data-flow as codeFlows[0].threadFlows[0].locations[]; locations[0] already reflects the primary sink position via the updated diag line/col. Acceptance: scan on tests/benchmark/corpus/rust/cmdi/cmdi_indirect.rs now reports line 5 (Command::new) as the primary sink, with the call site at line 10 visible in flow_steps. Two expect.json fixtures updated (must_match line_range widened): - javascript/taint/context_sensitive_call: 12-14 -> 7-14 (line 8 is the real sink inside run()). - rust/cfg/closure_async: 10-10 -> 10-11 (line 11 is Command::new inside the closure). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat(bench): phase 4/5 validate primary sink attribution across corpus Extend the benchmark scorer and ground truth to lock in phase 3's primary-location behavior, and add fixtures that exercise the new capability end-to-end. Scorer (tests/benchmark_test.rs): - Add optional `expected_call_site_lines: Option<Vec<[usize; 2]>>` on Case. When present, score_location_level additionally requires at least one flow_step in the finding's evidence trace to fall within ±2 of the call-site range. When absent, the check is skipped — fully forward-compatible with existing fixtures. - Retain ±2 tolerance on expected_sink_lines (compared against the now-primary Diag.line post-phase-3). Ground truth edits: - rs-cmdi-cross-001: expected_sink_lines [8,8] -> [9,9]. Line 8 is the transform::wrap call site (a cross-file propagator, not a sink); line 9 is Command::new, the real sink. The ±2 tolerance happened to mask this stale attribution but it was semantically wrong — phase 4 is the right time to correct it. Also adds expected_call_site_lines [8,8] so the new field is exercised on an existing cross-file case. - rs-cmdi-003: adds expected_call_site_lines [10,10] (run_cmd call). This fixture's sink (Command::new inside run_cmd at line 5) was the motivating case for phases 1-3; adding the call-site assertion guards against regression to caller-line attribution. New fixtures: - rust/cmdi/cmdi_indirect_multisink.rs (rs-cmdi-009): helper run_both takes two tainted params and invokes two Command sinks on consecutive lines. Locks in that primary line lands inside the helper (lines 5-6), not at the caller (line 12). Notes document that SinkSite is currently one-per-callee so both findings today collapse onto the first sink; expected_sink_lines=[5,6] and expected_call_site_lines=[12,12] stay valid either way. - python/cmdi/cross_indirect_sink/{app.py,helper.py} (py-cmdi-cross- 004): sink os.system lives in helper.py (cross-file), caller in app.py reads env source and calls run_cmd. Verifies phase 3's cross-file primary attribution: Diag.path = helper.py, Diag.line = 5, with app.py:7 recorded in flow_steps as a Call step. Acceptance: - `cargo test --test benchmark_test -- --ignored --nocapture` passes. - rs-cmdi-003 is TP/TP/TP (the target flip FN->TP at LOC). All pre-existing TP/TP/TP fixtures remain TP/TP/TP; 2 new fixtures are TP/TP/TP. - Aggregate rule-level: TP=158 FP=10 FN=1 TN=97, P=0.940 R=0.994 F1=0.966 on the 266-case corpus (was TP=156 FP=10 FN=1 TN=97 on 264 pre-phase-4, delta is the +2 new cases both resolving TP). - Full `cargo test` green (1566 lib tests + all integration tests). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat(taint): phase 5/5 lock Finding.primary_location contract via regression test Add a regression test in src/taint/ssa_transfer.rs that wires up a synthetic SsaFuncSummary with a SinkSite at other.rs:42:10 and drives the three emission stages (pick_primary_sink_sites → emit_ssa_taint_events → ssa_events_to_findings) against a minimal caller SSA body. Asserts the resulting Finding.primary_location is exactly that triple. The existing integration tests in src/taint/tests.rs cover the coarse FuncSummary path end-to-end through analyse_file. This test locks in the lower-level SSA-side plumbing so a future refactor that silently drops the site between pick → emit → findings fails here rather than only at the benchmark layer. Also refreshes tests/benchmark/results/latest.json (timestamp only; rs-cmdi-003 remains TP/TP/TP and the aggregate P/R/F1 are unchanged from phase 4). Closes the primary sink-location attribution feature (phases 1-5/5): * Phase 1 — SinkSite data model on summaries. * Phase 2 — SinkSite threaded into SsaTaintEvent and Finding. * Phase 3 — diag + SARIF consume primary_location. * Phase 4 — benchmark validates primary_call_site_lines across corpus. * Phase 5 — regression test locks the event→finding contract. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * refactor: clean up formatting and improve readability in multiple files * refactor: simplify type definition for deduplication key in findings * test(harness): add must_not_match expectation for FP regression guards Extends ExpectedFinding with must_not_match field that asserts a diagnostic must NOT fire — presence is a hard failure. Non-consuming scan so it coexists with must_match entries on the same rule_id. Adds forbidden_violations accumulator and updates summary line. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat(regression): update expectations to ensure must_not_match for various taint and resource leak rules * feat: implement auto-seeding for JS/TS handler parameters to enhance taint tracking * feat: update switch statement handling to improve control flow analysis * feat: implement promisify alias handling for JS/TS to enhance taint tracking * feat: enhance taint tracking by refining expectation handling and adding mode filtering * feat: refine SQL handling in stream processing and enhance auto-seeding for handler parameters * feat: update taint tracking rules to enforce full mode matching and improve flow analysis * feat: enhance Ruby subshell handling to improve taint tracking and flow analysis * feat: update xss_response expectations to refine taint flow analysis and enhance regression guarding * feat: refine framework detection and update expectation handling for Echo and Sinatra * feat: implement max_count for taint tracking expectations and deduplicate findings * feat: add strict_unexpected handling for taint-unsanitised-flow in expectation files * feat: enhance deduplication of taint-unsanitised-flow findings by collapsing based on line and severity * feat: add strict_unexpected handling for taint-unsanitised-flow in multiple expectation files * feat: add structural invariant checks for SSA bodies * feat: ensure deterministic phi emission order using BTreeSet * feat: enhance handling of terminators to ensure authoritative flow through successor edges * feat: enhance Goto terminator handling to ensure all successors are marked executable * feat: refactor code for improved readability and organization * feat: simplify predicate checks and enhance readability in SSA handling * feat: implement per-file parse timeout and enhance file size handling * feat: migrate analysis engine toggles from environment variables to configuration file * feat: remove unnecessary whitespace in hostile_input_tests.rs * feat: remove unnecessary whitespace in hostile_input_tests.rs * feat: update dependencies and enhance documentation on language maturity * feat: enhance security headers and improve request body limits * feat: implement sink capability bits for deduplication and enhance evidence tagging * feat: implement dynamic activation handling for gated sinks and enhance validation logic * feat: enhance configuration documentation and clarify inline analysis cache behavior * feat: implement panic recovery during analysis to continue scans past errors * feat: add expectations configuration for taint analysis and performance metrics * feat: enhance error handling and logging during file reading and mutex locking * feat: add cross-file body loading tests and plumbing for CF-1 phase * feat: implement cross-file k=1 context-sensitive inline taint analysis with new tests and fixtures * feat: implement indexed-scan parity in cross-file inline analysis with new dropdown and copy functionality * feat: enhance classification span handling in CFG and AST for improved source attribution * feat: add new Express routes for handling user input and telemetry data * feat: implement ternary expression handling in CFG with diamond structure for JS/TS * feat: implement Phase CF-3 abstract-domain transfer channels in summaries * feat: add support for string-prefix transfer in cross-file calls and update tests * docs: reduce RESULTS.md doc size * feat: implement Phase CF-4 per-return-path summary decomposition with tests * feat: update parameter handling in pass1 and refactor SsaFuncSummary initialization * feat: implement Phase CF-5 for cross-file SCC joint fixed-point convergence with new flags and tests * feat: implement Phase CF-6 with parameter-granularity points-to summaries and associated tests * refactor: update comments and documentation for clarity and consistency * style: format code for consistency and readability * refactor: simplify verdict handling and improve edge checking logic * refactor: optimize path and identifier collection by avoiding unnecessary cloning * chore: update Cargo.toml for Rust version 1.85 and add ignored files; modify CHANGELOG and README for clarity on state analysis defaults * refactor: update documentation and improve clarity in configuration files * refactor: update documentation and improve clarity in configuration files * feat: add JS/TS pass-2 convergence tests and expectations configuration * feat: add Phase 5 regression tests for inline cache origin attribution and update related logic * feat: implement Phase 7 deduplication and alternative path linking for taint findings * feat: implement structural DFS index for anonymous functions and update naming conventions * feat: add Phase 8 regression tests for container-element taint in JS and Python * feat: add engine-depth profiles and explain-engine option for CLI * feat: update expectations and add new README fixtures for multi-file scan regression * feat: implement Phase 11 callback-alias and factory patterns with regression tests * feat: implement Terminator::Switch for multi-way dispatch and add regression tests * feat: add real-CVE benchmark fixtures for CVE-2023-48022, CVE-2019-14939, and CVE-2023-26159 with corresponding patched variants * refactor: extract cfg and ssa_transfer to submodules * refactor: cargo fmt * refactor: remove unnecessary blank line in cfg_tests.rs * refactor: remove unnecessary planning file * chore: update Rust version to 1.88 and bump dependencies in Cargo files * feat: enhance triage UI with new layout and controls, update README for clarity * feat: enhance triage UI with new layout and controls, update README for clarity * chore: remove outdated section from README for version 0.5.0 * docs: improve clarity and consistency in README content * chore: add "GPL-3.0-or-later" to license options in about.toml * chore: update license handling in about.toml and check-licenses.mjs * style: format code for improved readability in TriagePage component * style: format code for improved readability in TriagePage component * chore: enhance license handling and improve body_id scoping in seed lookup * feat: introduce owner and parent body IDs for enhanced seed scoping * feat: implement direction-aware engine provenance with new CLI flag for strict CI gating * feat: add Undef SSA operation for improved control-flow handling * style: improve code formatting for consistency and readability in multiple files * feat: add 16-function chain SCC across multiple files for enhanced analysis * style: simplify code formatting for improved readability in multiple files * fix: update CapHitReason default implementation and improve README clarity * docs: enhance README with detailed explanations of taint analysis and limitations * docs: refine README for clarity and consistency in taint analysis section * style: improve code formatting for better readability in NewScanModal and scans * fix: update cargo-about command to use --offline for deterministic license generation * fix: update cargo-about command to use --offline for deterministic license generation * ci: add step to prime cargo registry cache for deterministic license generation * feat: add support for non-sink collections in authorization analysis * feat: enhance authorization checks with row-level ownership equality and binding tracking * feat: implement self-scoped user handling and enhance ownership checks * refactor: simplify assertions and formatting in authorization analysis tests * fix: normalize line endings in THIRDPARTY-LICENSES.html generation and update README with AI disclosure * docs: update AI disclosure section for clarity and conciseness * feat: add AI Contribution Policy and update contributing guidelines for AI assistance disclosure * feat: enhance authorization analysis with SSA-derived variable type classification * feat: implement auth_finding_to_diag function for enhanced security diagnostics * feat: add args_value_refs to CallSite struct for enhanced argument tracking * feat: add args_value_refs to CallSite struct for enhanced argument tracking * feat: add direction-aware engine provenance with LossDirection classification and new CLI flag * feat: simplify strip_cap_from_call_args call by removing unnecessary line breaks * feat: enhance error message handling in cli_validation_tests for better Windows compatibility * feat: optimize release profile settings in Cargo.toml and update CodeQL configuration * feat: enhance release build process with SBOM generation and SLSA provenance * feat: update actions/checkout and actions/setup-node to v6, enhance CLI options, and improve auth-check summaries * feat: introduce PathFact handling for path safety checks and rejection logic * feat: introduce PathFact handling for path safety checks and rejection logic * feat: update benchmark data and enhance path sanitization logic with new safety checks * feat: document AI assistance in frontend UI development and human review process * feat: add return path facts for enhanced path safety checks and update documentation * chore: update release date for version 0.5.0 in CHANGELOG.md * chore: clean up ci.yml by removing outdated comments and clarifying steps * feat: implement cross-language path sanitizers and validators for enhanced security * feat: enhance SSA value usage tracking by including block terminators and improve path safety checks * feat: enhance switch statement handling by adding per-case path constraints and support for exclusive cases * refactor: simplify conditional formatting and improve code readability in executor and lower modules * feat: add vulnerable examples for various languages demonstrating authentication and sanitization issues * feat: enhance actor context recognition for self-actor identifiers and add support for global non-sink receivers * feat: enhance actor context recognition for self-actor identifiers and add support for global non-sink receivers * feat: add transform classifiers for Java, Go, and Ruby with corresponding tests * refactor: clarify comments on reassign-to-constant idiom and sink behavior in guards.rs --------- Co-authored-by: Copilot <198982749+Copilot@users.noreply.github.com> Co-authored-by: Copilot Autofix powered by AI <62310815+github-advanced-security[bot]@users.noreply.github.com> Co-authored-by: Claude Opus 4.7 <noreply@anthropic.com>
16 KiB
Changelog
All notable changes to Nyx are documented here. The format is based on Keep a Changelog and the project follows Semantic Versioning. For where Nyx is going, see the Roadmap.
[Unreleased]
No changes yet.
[0.5.0] — 2026-04-24
The biggest release since launch. The taint engine was rebuilt on top of an SSA IR, cross-file analysis was deepened across the board, and Nyx now ships a local web UI for triaging findings without leaving your machine.
Heads-up: false positives or regressions on cross-file flows are possible. Please open an issue with a minimal reproduction if you hit one.
Highlights
- New SSA-based taint engine. Block-level worklist analysis over a pruned SSA IR, replacing the legacy BFS engine across all 10 languages. More precise, easier to extend, and the foundation for everything else in this release.
- Cross-file analysis. Function summaries (including the new SSA summaries) flow across files via SQLite-backed persistence. Callee bodies can be inlined for context-sensitive analysis (k=1) and walked symbolically across file boundaries.
- Symbolic execution layer. Candidate findings are walked symbolically from source to sink, producing concrete attack witnesses, pruning infeasible paths, and (optionally) handing constraints off to Z3.
- Local web UI (
nyx serve). React + Vite frontend for browsing findings, viewing flow paths, and triaging results. Triage decisions persist to.nyx/triage.jsonso they version with your code. - Hostile-repo hardening. Path containment, loopback-only serving, CSRF tokens, bounded artifact reads. Safe to run on untrusted code.
- Tighter false-positive controls. Type-aware sink suppression, abstract interpretation (intervals + string prefixes), constraint solving, allowlist and type-check guard recognition, and confidence scoring on every finding.
Engine
- SSA IR with dominance-frontier phi insertion. The optimization pipeline runs constant propagation, branch pruning, copy propagation, alias analysis, DCE, type facts, and points-to in sequence.
- Multi-label classification — a single API can carry both Source and Sink labels (e.g. PHP
file_get_contents, JavareadObject). - Gated sinks —
setAttribute,parseFromString, etc. only activate when the constant attribute argument is dangerous, and only the payload argument is treated as taint-bearing. - Container taint with per-index precision and bounded points-to. Aliased containers share heap identity correctly.
- Loop-aware analysis: induction-variable pruning, widening at loop heads, bounded unrolling in symex.
- Path-sensitive phi evaluation propagates validation when all tainted predecessors are guarded.
- Per-return-path summaries decompose function effects when paths produce different taint behavior.
- Cross-file SCC fixed-point — mutually recursive functions across files now reach a joint convergence.
- Demand-driven backwards analysis (off by default) annotates findings with cutoff diagnostics.
- Direction-aware engine notes (
UnderReport,OverReport,Bail) flow into confidence scoring, ranking, and the new--require-convergedstrict mode.
Symbolic Execution
- Expression trees (
SymbolicValue) preserve computation structure through the path walk: integers, strings, binary ops, concatenations, calls, phi merges. - Witness strings reconstruct concrete attack payloads at sink nodes.
- Bounded multi-path forking with reachability pruning.
- Cross-file: callee summaries are modeled directly, and pre-lowered callee bodies are loaded from SQLite so witnesses can keep walking across files.
- Interprocedural mode: nested frames with full state propagation, transitive descent up to 3 levels, structured cutoff tracking.
- Field-sensitive symbolic heap with bounded fields per object.
- Symbolic string theory:
Substr,Replace,ToLower,ToUpper,Trim,StrLenmodeled with concrete folding and sanitizer pattern detection. - Optional Z3 integration (compile-time
smtfeature) for cross-variable constraint solving.
Security & Coverage
- Vulnerability classes added: SSRF (10 languages), deserialization (Python, Ruby, Java, PHP), and
Cap::UNAUTHORIZED_IDfor auth-as-taint (off by default behind config flag). - Auth analysis: receiver-type sink gating, row-level ownership-equality detection, self-actor recognition (
let user = require_auth()), sink classification (in-memory vs realtime vs outbound), helper-summary lifting, and SQL JOIN-through-ACL recognition. - State analysis (resource lifecycle, use-after-close, leaks, unauthed access) is now on by default. RAII-aware for Rust and C++; recognizes Python
with, Godefer, Java try-with-resources. - Framework rule packs: Express, Flask/Django, Spring/JNDI, Rails. Per-language label depth significantly expanded.
- C/C++ taint depth: output-parameter source propagation, implicit definitions for uninitialized declarations.
- Negative test corpus (30 fixtures) and a 262-case benchmark with CI gates on rule-level Precision/Recall/F1.
CLI & Output
nyx serve— local web UI onlocalhostonly (refuses non-loopback binds).--require-convergedfilters out findings where the engine bailed early.- Analysis-engine toggles graduated from
NYX_*env vars to first-class flags and[analysis.engine]config:--constraint-solving,--abstract-interp,--context-sensitive,--symex,--cross-file-symex,--symex-interproc,--smt,--parse-timeout-ms. Old env vars still work when Nyx is consumed as a library. - Confidence (
High/Medium/Low) shown on every finding, including console headers. - Engine notes surfaced in console (
[capped: N notes — over-report]), JSON (engine_notes,confidence_capped), and SARIF (result.properties.loss_direction). - Flow paths reconstructed step-by-step with file/line/snippet for each hop.
- Concrete attack witness strings synthesized by the symbolic executor.
- Primary sink locations now point at the callee's real sink line; caller call sites are preserved as flow steps.
- Richer scan progress: explicit stages, timing breakdowns, language counters, skipped/reused file counts.
- Tighter taint-finding deduplication.
Hardening
- Centralized path containment rejects traversal, symlink escapes, and oversized reads across UI, debug, and triage routes.
nyx servevalidatesHostheaders, requires per-session CSRF tokens for mutations, and refuses scans outside the original repo root.- Walker re-validates symlink targets against the scan root.
- Bounded reads on framework manifests and
.nyx/triage.jsonimports. - UI falls back to plain text on pathologically long lines to defeat regex-DoS in syntax highlighting.
- Parser timeout is now configuration-backed with hostile-input regression coverage.
Persistence
- SQLite schema bumped to v2. Anonymous-function identity is now a structural DFS index instead of a byte offset, so inserting a line above an unchanged function no longer invalidates its
FuncKey. Pre-0.5.0 caches are silently cleared on open; triage data and scan history are preserved. - Engine-version metadata; persisted summaries and file hashes invalidate on mismatch.
- Stale SSA tables recreate when required columns are missing; deserialization failures log instead of silently dropping rows.
Frontend
- Replaced the legacy
app.jswith a React + Vite + TypeScript SPA. - Interactive graph workspace for CFG and call-graph views (Graphology + ELK + Sigma) with neighborhood reduction and a full-page inspector.
- Triage UI with database-backed decisions (true positive, false positive, deferred, suppressed) and
.nyx/triage.jsonround-trip. - Scan history, rules management, and finding detail panels with evidence and flow visualization.
- Vitest browser-side test suite wired into CI.
Removed
- Legacy BFS taint engine,
TaintTransfer,TaintState, and theNYX_LEGACYfallback. - Legacy vanilla-JS frontend (
app.js).
[0.4.0] — 2025-02-25
A precision and ergonomics release. Findings are now ranked, lower-noise by default, and easier to triage in CI.
Highlights
- Attack-surface ranking. Every finding gets an exploitability score combining severity, analysis kind, evidence strength, and path-validation. Console output shows the score in the header line;
--no-rankopts out. - Low-noise prioritization. Quality-category findings are excluded by default (
--include-qualitybrings them back). High-frequency Quality rules are rolled up per(file, rule)with example occurrences. LOW budgets cap noise without ever displacing High/Medium findings. - State-model dataflow analysis. New per-variable resource-lifecycle and auth-level analysis catches use-after-close, double-close, must-leak, may-leak (branch-aware), and unauthenticated-sink access. Opt-in via
scanner.enable_state_analysis. - Inline
nyx:ignoresuppressions with same-line and next-line directives, comma lists, wildcard suffixes, and string-literal guards across all 10 languages. - AST pattern overhaul. All 10 language pattern files rewritten with consistent metadata, namespaced IDs (
<lang>.<category>.<specific>), and 30+ new patterns. 11 broken tree-sitter queries fixed. - Monotone forward-dataflow taint engine. Replaced the BFS engine with a proper worklist over a finite lattice. Termination is now guaranteed by lattice height, eliminating BFS-budget bailouts on large files.
- Path-sensitive taint analysis. Branch predicates flow with the analysis. Contradictory guards prune infeasible paths; validation calls produce annotated findings without changing severity.
- Interprocedural call graph. Whole-program graph with three-valued callee resolution (
Resolved/NotFound/Ambiguous), SCC analysis, and topo ordering ready for bottom-up taint propagation.
CLI & Output
--severity <EXPR>replaces--high-only. SupportsHIGH,HIGH,MEDIUM,>=MEDIUM. Filtering is now applied at the output stage so taint and CFG findings are correctly downgraded too.--mode <full|ast|cfg|taint>replaces--ast-onlyand--cfg-only.--index <auto|off|rebuild>replaces--no-indexand--rebuild-index.--fail-on <SEVERITY>for CI exit-code gating.--min-score <N>for ranking-aware filtering.--show-suppressedreveals suppressed findings dimmed with[SUPPRESSED].--keep-nonprod-severity(renamed from--include-nonprod).--quietmirrorsoutput.quiet.- Console renderer overhauled: severity is the strongest visual anchor, file paths are dim blue, taint flows use
→arrows, multi-line call chains are normalized. - Confidence shown alongside score in the header line.
- Pattern-level confidence is now set at the pattern definition site, not heuristically inferred from severity.
Breaking
- Config and data directory renamed from
dev.ecpeter23.nyxtonyx. Existing config and SQLite indexes at the old path won't be picked up — copy them across or re-runnyx scan. Severity::from_strnow returnsErrfor unknown values instead of silently defaulting to Low.
Notable Fixes
- KINDS-map audit across all 10 languages: 89 missing tree-sitter node types added. Switch/case, try/catch/finally, class bodies, lambdas, closures, and namespaces are no longer silently dropped.
else_clausemapping fixed for C, C++, Rust, JS, TS, Python, PHP — code inside else blocks was being dropped from the CFG.- Rust
if let/while lettaint propagation now works. - Taint BFS non-termination on large JS files (the BFS engine has since been replaced).
- C++
popenpattern ID collision with C. - Constant-arg sink suppression for AST patterns.
[0.3.0] — 2026-02-25
Configurability, SARIF, and an aggressive false-positive purge.
Highlights
- Configurable analysis rules. Sources, sanitizers, sinks, terminators, and event handlers can be defined per language in
nyx.localor vianyx config add-rule/add-terminator. Config rules take priority over built-in rules. nyx configCLI subcommand withshow,path,add-rule,add-terminator.- SARIF 2.1.0 output (
-f sarif). Spec-compliant for GitHub Code Scanning, Azure DevOps, and other SARIF consumers. SourceKindtaint classification. Findings carry an inferred source kind (UserInput,EnvironmentConfig,FileSystem,Database,Unknown) and severity is now derived from it instead of being hardcoded to High.- Non-prod severity downgrade by default. Findings in tests, vendor, benchmarks, examples, fixtures, build scripts, and
*.min.jsare downgraded one tier.--include-nonprodrestores original severity. - Resource leak detection for Python, Ruby, PHP, JavaScript, and TypeScript (file handles, sockets, locks, mysqli, curl, fs streams).
- Progress bars and quiet mode. Indicatif-driven progress for discovery, Pass 1, and Pass 2 (auto-hidden in JSON/SARIF/quiet modes).
Performance
- Single fused parse+CFG pass replaces the previous two-parse summary extraction.
- Light-weight dataflow sweep in CFG builder is now O(N) per function instead of O(N²) over the whole file.
- Parallel summary merging via rayon fold/reduce.
- Indexed scans now read and hash each file once instead of up to 4 times.
- SQLite mutex mode relaxed (r2d2 + WAL provides safety without global lock).
- Zero-allocation taint hashing and in-place taint transfer.
Notable Fixes
- One-hop constant-binding suppression:
cmd = "git"; subprocess.run([cmd, ...])no longer flags. - Exec-path guards (
which,resolve_binary,shutil.which) recognized. signal.connect/event.connectno longer match Python db-connection acquire patterns.threading.Lock()without.acquire()no longer flags as unreleased.FileResponse(f)/send_file(f)recognized as ownership transfer.el.hrefno longer matcheslocation.hrefpatterns.- Constant-only sink calls (
subprocess.run(["make","clean"])) suppressed. std::coutno longer treated as a sink.- Break/continue inside loops correctly wires into the loop header/exit, fixing false unreachable-code findings.
- Preprocessor
#ifdef/#endifblocks no longer orphan subsequent code in C/C++. freopenno longer matchesfopenacquire patterns.- Struct-field, linked-list, and global assignment recognized as ownership transfers.
[0.2.0] — 2026-02-24
The cross-file release.
- Two-pass cross-file taint analysis. Pass 1 extracts
FuncSummaryper function (caps, propagation, callees), Pass 2 runs BFS taint propagation with cross-file callee resolution. - CFG analysis engine with five detectors: unguarded sinks, auth gaps in web handlers, unreachable security code, error fallthrough, resource leaks.
- Cross-language interop via explicit
InteropEdgestructs (no false-positive name collisions). - Function summaries persisted to SQLite (
function_summariestable). - Multi-language CFG + taint support for all 10 languages.
- Resource leak detection for C/C++, Go, Rust, and Java.
- Finding scoring system combining severity, entry-point proximity, path complexity, taint confirmation, and confidence.
- Analysis modes:
Full(default),Ast(--ast-only),Taint(--cfg-only). - Cap bitflags expanded:
ENV_VAR,HTML_ESCAPE,SHELL_ESCAPE,URL_ENCODE,JSON_PARSE,FILE_IO. - Performance: read-once/hash-once via
_from_bytesvariants, lock-free rayon, SQLite WAL + 8 MB cache + 256 MB mmap. - Tracing instrumentation on all pipeline stages; criterion benchmark suite.
[0.2.0-alpha] — 2025-06-28
- Experimental intra-procedural CFG + taint analysis for Rust. Builds a CFG, applies dataflow, and flags unsanitised Source → Sink paths (e.g.
env::var→Command::new). - O(1) node-kind lookup via per-language PHF tables.
- Debug channel
target=cfg(RUST_LOG=nyx::cfg=debug) to inspect generated graphs. - Fixed Windows release pipeline (PowerShell has no
zipcommand).
[0.1.1-alpha] — 2025-06-25
- Fixed
scan --no-indexnot respecting themax_resultsconfig setting (#1). - Integration tests covering indexing and scanning pipelines (#3, #4, #5, #8).
[0.1.0-alpha] — 2025-06-25
Initial alpha release.
- Multi-language AST pattern scanning via
tree-sitterfor Rust, C/C++, Java, Go, PHP, Python, Ruby, TypeScript, JavaScript. scancommand: filesystem walker, pattern execution, console output.indexcommand: build, rebuild, and status reporting of SQLite-backed index.listcommand: list indexed projects with optional verbosity.cleancommand: remove one or all project indexes.- Configuration system with
nyx.conf(generated) andnyx.local(user overrides). - Default severity levels: High, Medium, Low.