166 commits

Author	SHA1	Message	Date
Ricardo	7e18d340be	errobars_trainset -> plot_errorbars_trainset	2015-09-21 13:53:25 +01:00
Max Zwiessele	8132084de6	[ep] now calling exact inference instead of copying code	2015-09-11 15:47:07 +01:00
Max Zwiessele	19906edf7d	[pred_var] added predictive variable as property now	2015-09-10 15:50:49 +01:00
Zhenwen Dai	328d45330e	apply bug fix for set_XY	2015-09-10 15:31:44 +01:00
Alan Saul	ef778f75d4	Updated sampling and plots to be correct shape, and changed plotting of sampling to be posterior samples p(f*|f), like it used to be, and samples_y to plot samples of p(y*|y)	2015-09-10 11:08:28 +01:00
Max Zwiessele	929cf0a489	[more coverage] and predictive var fixes	2015-09-07 16:52:59 +01:00
Max Zwiessele	78257d2314	[predict] using gp predict in sparse gp and predictive variable	2015-09-07 14:11:01 +01:00
Max Zwiessele	a980c201a9	[setxy] always run the update after updating X and Y	2015-09-04 16:01:44 +01:00
Ricardo	04b6747e3b	Merge branch 'devel' of github.com:SheffieldML/GPy into devel	2015-09-03 17:30:40 +01:00
Ricardo	6e76a96d77	errorbars fixed	2015-09-03 17:30:16 +01:00
Max Zwiessele	f6d07ff76a	[magnification] added static kernel support and faster derivative computations	2015-09-03 10:19:57 +01:00
Max Zwiessele	4dfdce9b80	Merge branch 'devel' of github.com:SheffieldML/GPy into devel	2015-09-03 09:33:13 +01:00
Max Zwiessele	839e3dc6f0	[magnification] plot_magnification expanded	2015-09-03 09:33:07 +01:00
Ricardo	06f540584b	Merge branch 'devel' of github.com:SheffieldML/GPy into devel	2015-09-02 19:40:45 +01:00
Ricardo	8e437e4bda	New function to plot just the errorbars of the training data	2015-09-02 19:40:11 +01:00
Max Zwiessele	ca60ad3195	[magnification] mostly plotting and some model corrections for _predictive_variable	2015-09-02 15:46:40 +01:00
Max Zwiessele	016b3a9965	Merge branch 'updates' into devel	2015-09-02 11:23:35 +01:00
Max Zwiessele	70a9a26d7e	[core] updating system, security branching	2015-09-02 09:06:17 +01:00
James Hensman	ce9ee6c758	ensuring the shape of the mean vector at predict time fixes bug in EP prediction	2015-09-01 22:38:49 +01:00
James Hensman	7ba26eda1c	the Opper-Archambeau method is now implemented as an inference method in the GPy style	2015-08-18 11:39:27 +01:00
James Hensman	ea3bfbb597	minor bugfixes in plotting: quantiles are now computed using predict_kw ... correctly	2015-08-18 08:00:47 +01:00
Zhenwen Dai	9217438d90	allow Y to be uncertain	2015-08-07 13:37:47 +01:00
Zhenwen Dai	1a141d9ce5	improve the documentation of infer_newX	2015-07-27 12:51:03 +01:00
Alan Saul	af20bed747	Passing metadata	2015-07-22 18:32:12 +01:00
Zhenwen Dai	6240f494f2	[ssgplvm] change the default gamma interval	2015-05-28 14:19:46 +01:00
Zhenwen Dai	afa0621488	[ssgplvm] implement IBP prior	2015-05-21 14:18:32 +01:00
Zhenwen Dai	d01545c92b	prevent the predicted variance to be negative	2015-05-16 22:39:11 +01:00
Max Zwiessele	b55f84f04f	[predict] documentation	2015-05-11 11:26:25 +01:00
Max Zwiessele	dc138aa97b	[predict] documentation	2015-05-11 11:21:45 +01:00
Alan Saul	5dd75d66ae	Merge branch 'devel' of github.com:SheffieldML/GPy into devel	2015-04-28 10:51:23 +01:00
Alan Saul	75ebe4bf10	Added log predictive density, student t degrees of freedom gradients and plotting functionality	2015-04-27 18:56:20 +01:00
mzwiessele	335df2942f	[plotting] added predict_kw to plot function	2015-04-24 11:02:01 +02:00
mzwiessele	aaa5020bf1	Merge branch 'devel' of https://github.com/SheffieldML/GPy into devel	2015-04-17 12:17:33 +02:00
mzwiessele	18f1c2772d	[minor edits]	2015-04-17 12:17:30 +02:00
Alan Saul	f4cf052bce	Added option to plot the transformed link function (posterior once the link function has been applied)	2015-04-10 15:44:15 +01:00
Alan Saul	034d141d63	Fix typo	2015-04-10 10:43:00 +01:00
Alan Saul	ef2b11c799	Minor commenting changes	2015-04-10 10:40:18 +01:00
Mike Croucher	5c653fa4b0	Fix merge conflicts	2015-04-01 13:03:48 +01:00
James Hensman	8c71d52b7f	Merge branch 'mean_functions' into devel	2015-04-01 09:16:08 +01:00
James Hensman	2c7582516d	adding a comment to clarify predictive_gradeints (Thanks AT)	2015-03-30 13:41:25 +01:00
James Hensman	cf0e29b207	working mean function examples	2015-03-26 08:48:56 +00:00
James Hensman	e97b6e59aa	added mean function into the prediction	2015-03-23 14:59:08 +00:00
James Hensman	2d312099c0	added parseing of mean func to gp.py	2015-03-23 14:56:19 +00:00
Mike Croucher	7930eb646f	Merge from upstream	2015-03-13 14:23:40 +00:00
Zhenwen Dai	7f30fef698	add trigger update to set_{X,Y,Z}	2015-03-13 09:47:36 +00:00
Mike Croucher	1521b3e260	Convert print to function for Python 3 compatibility. This breaks compatibility for versions of Python < 2.6	2015-02-26 08:11:11 +00:00
Mike Croucher	2ca24a88f5	More relative import fixes for Python 3 compatibility	2015-02-26 07:14:40 +00:00
Zhenwen Dai	9f7ae611ed	force set_XY to update the model	2015-02-17 10:49:06 +00:00
James Hensman	9bc65ac814	more ]#copyrighting	2014-11-21 11:40:50 +00:00
Max Zwiessele	c635de54b9	[infer_newX] updated for missing data	2014-11-14 11:09:51 +00:00