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Author SHA1 Message Date
javiergonzalezh
b49228d1d0 minor error in corregionalization corrected 2015-02-23 15:02:50 +00:00
mzwiessele
6435b83c7a [sparse gp] prediction with uncertain inputs 2015-02-21 14:43:10 +01:00
mellorjc
f25797cd61 catch only a specific error 
catch only NameError, rather than everything.
 2015-02-19 11:45:57 +00:00
mellorjc
7ad275ce8a matplotlib interactive mode only in IPython 
have interactive mode only in IPython so that running scripts that plot from python behave like normal.
 2015-02-19 11:31:46 +00:00
Zhenwen Dai
9f7ae611ed force set_XY to update the model 2015-02-17 10:49:06 +00:00
Zhenwen Dai
c5c8b8341c A temporal fix for the problem of sometimes the model not being updated. 2015-02-17 10:48:26 +00:00
Zhenwen Dai
ae5d70b063 add mcmc into inference import 2015-02-15 19:24:51 +00:00
James Hensman
7920ff0b4d Merge branch 'devel' of github.com:/sheffieldml/GPy into devel 2015-02-11 11:49:59 +00:00
James Hensman
482bd1472c reconfigured svgp inference a little 2015-02-11 11:49:45 +00:00
James Hensman
393b9e94ba added more stable expectations for Bernoulli 2015-02-10 16:15:37 +00:00
James Hensman
06d7e690f3 minor weave/numpy bug in coregionalize 2015-02-10 15:54:59 +00:00
James Hensman
475eceb4dd Merge branch 'devel' of github.com:sheffieldml/GPy into devel 2015-02-10 14:23:11 +00:00
James Hensman
b499a870fb fixed a plotting bug for sliced plots 2015-02-10 14:23:03 +00:00
Alan Saul
f690192384 Added logging for jitter so we know how much has been added and how many tries have been taken 2015-02-10 11:52:40 +00:00
Alan Saul
952851de88 Bug in linalg jitchol!!! 2015-02-09 19:38:19 +00:00
Alan Saul
cfdd72fc72 Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2015-02-09 19:36:08 +00:00
Alan Saul
29d153e185 Bug in linalg jitchol!!! 2015-02-09 19:35:46 +00:00
Daniel Beck
98c743d157 test + code change in gradients_X 2015-02-09 10:02:26 +11:00
Daniel Beck
fc8705104b a cleaner test 2015-02-09 09:41:21 +11:00
Daniel Beck
d6a56a6f0b changed operator.mul to np.multiply for consistency 2015-02-09 09:35:32 +11:00
Daniel Beck
8b4274339a added decorator that changes numpy invalid op warning to exception 2015-02-09 09:28:53 +11:00
Daniel Beck
1d2cbfe44a first attempt 2015-02-06 19:39:46 +11:00
Max Zwiessele
e967c95ef0 Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2015-01-30 09:43:06 +00:00
Max Zwiessele
167e9c538d [var dtc] added code for additional covariates, not affecting normal procedures 2015-01-30 09:43:02 +00:00
Neil Lawrence
47cbdc265e Update __init__.py 
Add inference to __init__.py
 2015-01-21 08:15:52 +01:00
Neil Lawrence
8288240b7d Update hmc.py 2015-01-21 08:14:35 +01:00
Cristian Guarnizo
81c57140c4 Update __init__.py 
Added EQ_ODE2.
 2015-01-19 11:28:27 -05:00
Cristian Guarnizo
88f69312eb Create eq_ode2.py 
Added ODE2 kernel for latent force models.
 2015-01-19 11:27:07 -05:00
Max Zwiessele
57e941140c [opt] unified printing of status of optimization 2015-01-15 09:02:45 +00:00
Max Zwiessele
4deac0103c [transformations] bugfix for pickling 2015-01-15 09:02:22 +00:00
Max Zwiessele
7fbbdafdbf [opt] bugfix 2015-01-13 15:07:24 +00:00
Max Zwiessele
be3c8f5202 [verbose opt] messages would be overwritten when using ipython_notebooks, fixed 2015-01-13 14:29:28 +00:00
Max Zwiessele
07e85042ec [kern] added Fixed kern to import list in GPY.kern 2015-01-13 14:05:50 +00:00
Max Zwiessele
53dcd3f9fa [objective grads] undid the change, as this would lead to dramatic problems in reloading old models using the pickle module 2015-01-13 13:53:28 +00:00
Max Zwiessele
20eff02061 [objective grads] undid the change, as this would lead to dramatic problems in reloading old models using the pickle module 2015-01-13 13:46:49 +00:00
Max Zwiessele
17f42768da [progress] show progress of optimization using optimize(itpython_notebook=True) 2015-01-13 11:57:14 +00:00
Max Zwiessele
1c6cef44b6 [progress] show progress of optimization using optimize(itpython_notebook=True) 2015-01-13 11:49:40 +00:00
Max Zwiessele
b9b6ce91d8 [updates] now handled in observable, should have from the begining :/ 2015-01-13 09:45:11 +00:00
tjhgit
8d3308b76c Added spline kernel (from P. Hennig) to GPy 
Had to modify the base_plots and model_plots.py, since I had troubles
installing GPy in anaconda on debian linux due to the dependency on
Tango. Why is Tango needed to represent colors that can also be typed in
Hex format thus eliminating further dependencies.
 2015-01-13 00:10:40 +01:00
Max Zwiessele
cd8dd9ab98 [optimization prints] unified printouts for optimizers, added ipython_notebook flag for use in ipython notebooks 2015-01-12 15:43:33 +00:00
Max Zwiessele
869a5c4f92 [parent notification] is now priority -1000, instead of -inf 2015-01-12 13:17:34 +00:00
Max Zwiessele
e03d6d4f71 [model print] updates now shown in print out 2015-01-12 11:55:44 +00:00
Max Zwiessele
3aedf63966 [natural gradients] added natural gradients, usable but not analysed 2015-01-12 11:36:53 +00:00
Max Zwiessele
dff577d22b renamed opimizer methods to unobscure gradients and objective 2015-01-12 11:35:57 +00:00
Max Zwiessele
ec42011617 [parameterized] print outs for ipython notebook 2015-01-12 11:33:31 +00:00
Nicolo Fusi
98f632e92e Merge branch 'master' of github.com:SheffieldML/GPy 2015-01-10 12:49:31 -08:00
Nicolo Fusi
bd1fb56e6c re-implemented warpedGP for new release of GPy 2015-01-02 15:07:19 -08:00
Alan Saul
1b27337e7c SVI now working with minibatches 2014-12-22 15:40:49 +00:00
Alan Saul
a8b0d60c3e SVI now implemented without natural natural gradients or batches 2014-12-22 13:35:56 +00:00
James Hensman
b642360ede multi-outputted the svgp inference (buggy, probably) 2014-12-22 12:07:51 +00:00