551 commits

Author	SHA1	Message	Date
Max Zwiessele	c1a2f7e556	[matplotlib] pylab -> pyplot	2015-09-10 08:55:54 +01:00
Max Zwiessele	cf2673632b	[merge] merge master into devel	2015-09-08 17:25:44 +01:00
Max Zwiessele	bcc1e7c8d4	git pushMerge branch 'devel' of github.com:SheffieldML/GPy into devel	2015-09-07 17:26:30 +01:00
Max Zwiessele	c6d9ebf08d	[licensing] replaced licensing with BSD, and erfcx	2015-09-07 17:26:27 +01:00
Zhenwen Dai	6152f912bb	optimize util for mpi	2015-09-07 17:20:03 +01:00
Zhenwen Dai	607c214284	changed gpu interface for mpi	2015-09-07 16:27:31 +01:00
Mike Croucher	e7a9b53506	Automatic fallback to Numpy if Cython modules not available	2015-09-07 13:22:51 +01:00
Zhenwen Dai	7335d4e62e	Merge branch 'devel' of github.com:SheffieldML/GPy into devel	2015-09-04 17:27:34 +01:00
Zhenwen Dai	9145a87ee8	allow cache supporting boolean and integers	2015-09-04 17:27:22 +01:00
Max Zwiessele	8d61fe632b	[pickling] pickle error	2015-09-04 16:23:48 +01:00
Max Zwiessele	f1e040123f	Revert "[caching] different error" ... This reverts commit f7087ebc90.	2015-09-04 16:09:18 +01:00
Max Zwiessele	f7087ebc90	[caching] different error	2015-09-04 16:07:59 +01:00
Zhenwen Dai	5d2ef2c086	Merge branch 'devel' of github.com:SheffieldML/GPy into devel	2015-09-03 16:32:15 +01:00
Zhenwen Dai	ded0b3366d	add util.parallel into import	2015-09-03 16:32:06 +01:00
mikecroucher	d4caf37d41	Merge pull request #219 from Dapid/fix_209 ... Now Scipy 0.16 is required, removing fixes for older versions.	2015-09-02 17:01:34 +01:00
Max Zwiessele	70a9a26d7e	[core] updating system, security branching	2015-09-02 09:06:17 +01:00
David Menéndez Hurtado	13438f1c10	Fixing the blas arguments for DSYRK	2015-08-24 14:27:41 +02:00
David Menéndez Hurtado	3746af7729	Fixing confussion between lapack and ctypes interfaces	2015-08-24 13:30:05 +02:00
David Menéndez Hurtado	ba2ea3eb73	FIX: now Scipy 0.16 is required, removing fixes for older versions. Accessing blas through the scipy interface	2015-08-24 12:56:18 +02:00
James Hensman	e144463ce7	Merge pull request #216 from Dapid/devel-cython_update ... ENH: various Cython enhancements, mostly releasing the GIL	2015-08-17 15:15:39 +01:00
James Hensman	f292f6edd0	running cython	2015-08-17 15:01:19 +01:00
James Hensman	521ca142bb	reenabling gil	2015-08-17 15:00:29 +01:00
James Hensman	6068369979	minor corrections :)	2015-08-17 14:57:54 +01:00
David Menéndez Hurtado	a379382dd5	ENH: various Cython enhancements, mostly releasing the GIL when not needed	2015-08-17 14:46:37 +02:00
James Hensman	8a7191c395	Merge branch 'devel-cythonchol' of git://github.com/Dapid/GPy into Dapid-devel-cythonchol	2015-08-17 13:05:30 +01:00
David Menéndez Hurtado	629e57257f	FIX: ensuring contiguity of the buffers for BLAS call and returning a Numpy array	2015-08-17 13:39:03 +02:00
David Menéndez Hurtado	fb77c00da7	FIX: transforming the indexing to 2D	2015-08-17 13:24:55 +02:00
David Menéndez Hurtado	da7e4e3af6	ENH: implementing the Cholesky backpropagation through Scipy's BLAS	2015-08-17 12:21:54 +02:00
James Hensman	f8376765c6	fixed strange bug. In python 3, numbers startin 0 are octal.	2015-08-12 15:19:04 +01:00
Mike Croucher	e7d1277e62	Python 3 fixes	2015-06-23 01:26:52 -07:00
James Hensman	60fabe41e2	lots of work on cython choleskies	2015-06-11 18:00:47 +01:00
James Hensman	93076df259	fiddling with cholesky backprop	2015-06-08 21:09:45 +01:00
James Hensman	04c14a9b4c	parallelizing backprop of cholesky	2015-06-08 15:25:16 +01:00
James Hensman	77093a304c	svgp working with reordered chols	2015-05-15 08:59:19 +01:00
James Hensman	5d1875ec44	preliminary reconfiguring or choleskies ordering	2015-05-05 14:13:38 +01:00
Alan Saul	e744857e0a	Small name change	2015-04-30 17:29:51 +01:00
Alan Saul	16e6d39317	Fixed linalg for general matricies	2015-04-30 14:22:46 +01:00
Alan Saul	2dcfabf300	Added another einsum operation	2015-04-30 13:59:00 +01:00
James Hensman	3c3af7f3fe	better cython compiler directives for choleskies	2015-04-30 13:47:38 +01:00
Alan Saul	762e1e75b0	Added faster einsums to linalg, with a couple of tests	2015-04-30 11:16:29 +01:00
James Hensman	a772a6120a	merge by running cython	2015-04-29 14:30:51 +01:00
James Hensman	d27405a20a	added backprop of cholesky grads	2015-04-29 14:29:39 +01:00
James Hensman	0d9101ef21	changes to comments in compiled cython file	2015-04-28 16:39:16 +01:00
James Hensman	4ba928082f	all tests passing	2015-04-28 16:04:02 +01:00
James Hensman	9e4c33910f	tests passing (cython)	2015-04-28 14:57:00 +01:00
James Hensman	59cf0b3c9a	some eidts to choleskies.pyx	2015-04-27 20:53:36 +01:00
James Hensman	5edf464efa	help choleskies along a little	2015-04-27 20:15:36 +01:00
James Hensman	25cebf790c	adding choleskies cythonized	2015-04-27 19:47:19 +01:00
James Hensman	e88b8a88d1	manual merging with AS	2015-04-16 12:45:04 +01:00
Alan Saul	fe0a4285ca	Removed jitter printing	2015-04-14 17:14:05 +01:00