555 commits

Author	SHA1	Message	Date
Mike Croucher	e7d1277e62	Python 3 fixes	2015-06-23 01:26:52 -07:00
James Hensman	51a4e881da	small bug in cython tests	2015-05-15 09:02:48 +01:00
James Hensman	5d1875ec44	preliminary reconfiguring or choleskies ordering	2015-05-05 14:13:38 +01:00
Alan Saul	e744857e0a	Small name change	2015-04-30 17:29:51 +01:00
Alan Saul	16e6d39317	Fixed linalg for general matricies	2015-04-30 14:22:46 +01:00
Alan Saul	2dcfabf300	Added another einsum operation	2015-04-30 13:59:00 +01:00
Alan Saul	762e1e75b0	Added faster einsums to linalg, with a couple of tests	2015-04-30 11:16:29 +01:00
James Hensman	edc868c213	added cholesy backprop test	2015-04-29 14:37:51 +01:00
James Hensman	44fbcb4914	Merge branch 'cython2' into devel	2015-04-28 16:05:37 +01:00
James Hensman	1ebbc49fdd	fixed coregionalize cython	2015-04-28 15:57:27 +01:00
Alan Saul	1acbcd2593	Fixed deg free gradient	2015-04-28 10:51:13 +01:00
James Hensman	e88b8a88d1	manual merging with AS	2015-04-16 12:45:04 +01:00
Alan Saul	5c9587404d	Added some numerical stability to link functions with tests for link functions	2015-04-10 14:58:02 +01:00
James Hensman	ea787fd376	manual merging	2015-04-09 15:46:40 +01:00
James Hensman	1e30ffd730	speed ups for normal cdf	2015-04-09 15:42:02 +01:00
Mike Croucher	985b2ea70c	Added (SLOW) Pure Python implementations of flat_to_triang and triang_to_flat	2015-04-01 15:42:49 +01:00
Mike Croucher	5c653fa4b0	Fix merge conflicts	2015-04-01 13:03:48 +01:00
Mike Croucher	e82b5fe773	Resolve merge conflicts	2015-04-01 11:44:20 +01:00
James Hensman	592414ce64	tests to probe the mean-function functionality	2015-04-01 09:37:10 +01:00
James Hensman	c3d20c744f	merges	2015-04-01 09:15:39 +01:00
Alan Saul	1a253ff82a	Added safe_exp and tests	2015-03-27 15:14:52 +00:00
Alan Saul	3c7a1b9a91	Merge branch 'devel' into saul_merge	2015-03-27 14:17:34 +00:00
Alan Saul	dd6219fb7e	Merge branch 'devel' of github.com:SheffieldML/GPy into devel	2015-03-27 14:17:13 +00:00
Alan Saul	0ea3d33695	Merging with private repo, mostly fixed	2015-03-27 14:17:03 +00:00
Alan Saul	d7316ee7d9	Relaxed inference test requirement	2015-03-27 13:49:12 +00:00
James Hensman	72de607199	mean functions now working for svgp. with tests	2015-03-26 16:20:17 +00:00
James Hensman	02f2bb5c76	fixed up product kernel tests	2015-03-26 11:45:18 +00:00
James Hensman	624117eaac	mappings, including tests	2015-03-26 11:27:20 +00:00
James Hensman	254157ce04	Merge branch 'devel' of github.com:/sheffieldml/GPy into mean_functions	2015-03-25 16:48:24 +00:00
James Hensman	534e0df606	some tests for the svgp, and some changes to the likelihoods	2015-03-24 14:11:50 +00:00
James Hensman	b48d58fb1f	merged. ish.	2015-03-23 16:26:31 +00:00
Mike Croucher	c307b989cc	Bug fix for issue #161	2015-03-15 11:10:45 +00:00
Mike Croucher	7930eb646f	Merge from upstream	2015-03-13 14:23:40 +00:00
Alan Saul	233c5ee8b4	Updated other likelihoods to give back logpdf and gradients for each link_f rather than summing on the inside	2015-03-09 10:27:21 +00:00
Mike Croucher	fff110ca19	im_self->__self__ fix for python 3	2015-03-03 17:51:54 +00:00
Mike Croucher	317706dfd0	Removed debugger set up command	2015-03-03 10:39:19 +00:00
Mike Croucher	a4c8bb5807	Changed refereences to iteritems() to items() for Py3 compat	2015-03-03 09:31:52 +00:00
Mike Croucher	5607bd9a19	Various Py3 related import fixes	2015-03-02 20:13:21 +00:00
Mike Croucher	82722305c3	Changed refereences to iteritems() to items() for Py3 compat	2015-03-02 19:50:41 +00:00
Mike Croucher	8d66b7b4f0	Need to explicitly turn a range object to a list in for these tests	2015-02-28 19:15:46 +00:00
Mike Croucher	e0d0f2e633	from functools import reduce for Py3 compat	2015-02-28 18:59:14 +00:00
Mike Croucher	09c93e62d0	Print fixes for Python 3	2015-02-27 19:03:45 +00:00
Mike Croucher	ebc0b6e1a5	Resolved merge conflict	2015-02-26 14:37:58 +00:00
Mike Croucher	c6b43d91da	Exception fixes for Python 3 compat	2015-02-26 14:29:40 +00:00
mzwiessele	ed6da422eb	[pickling errors] due to too little constant jitter, the gradient checks in pickle tests did not pass	2015-02-26 14:24:07 +00:00
James Hensman	9f51137469	Merge pull request #174 from beckdaniel/kernel_prod_bugfix ... Kernel product bugfix	2015-02-26 10:22:00 +00:00
Alan Saul	f690192384	Added logging for jitter so we know how much has been added and how many tries have been taken	2015-02-10 11:52:40 +00:00
Alan Saul	952851de88	Bug in linalg jitchol!!!	2015-02-09 19:38:19 +00:00
Alan Saul	29d153e185	Bug in linalg jitchol!!!	2015-02-09 19:35:46 +00:00
Daniel Beck	98c743d157	test + code change in gradients_X	2015-02-09 10:02:26 +11:00