547 commits

Author	SHA1	Message	Date
mzwiessele	61dff6e62b	[fix #380] reloading ep	2016-04-27 12:41:24 +01:00
mzwiessele	e4d76a133a	[fix #380] reloading ep	2016-04-27 12:37:04 +01:00
Max Zwiessele	0116b03f3c	[plotting] still testing the testing	2016-03-31 14:06:23 +01:00
Zhenwen Dai	67ba9b60c6	move _raw_predict into posterior object	2016-03-17 11:29:33 +00:00
Zhenwen Dai	f2b813551a	bug fix for mcmc sampler and add test case	2016-03-10 18:37:53 +00:00
Zhenwen Dai	ba74e29aee	merge with upstream	2016-03-10 18:17:35 +00:00
mzwiessele	e4a4344334	[stochastics] update for new stochastic iptimizers in gpy	2016-03-08 09:47:24 +00:00
mzwiessele	b1e073318f	[chaching] changing all chacher limits to 3	2016-03-07 11:37:22 +00:00
Zhenwen Dai	00e4ac152a	merge GPy upstream	2016-02-23 13:52:45 +00:00
Max Zwiessele	98daaba57e	[plotting] xlim setting	2016-02-19 14:55:36 +00:00
Zhenwen Dai	8b279175c5	fix the issue of negative prediction variance of normal GP	2016-01-21 11:22:57 +00:00
Max Zwiessele	f68001a84e	[vardtc] these two lines are overridden by the next two lines...	2016-01-12 12:33:42 +00:00
Zhenwen Dai	c0e6978054	merge with current GPy devel	2015-12-09 17:27:06 +00:00
Alan Saul	3d90b1b3ff	Documentation	2015-11-20 15:52:19 +02:00
Alan Saul	02af482585	Removed old code	2015-11-20 15:50:01 +02:00
Alan Saul	efa9b920c3	Allow EP to have a auto reset option	2015-11-20 15:06:20 +02:00
Alan Saul	ebf98328fe	Merge branch 'devel' into fixing_likelihoods	2015-11-12 13:36:23 +00:00
Max Zwiessele	913d80f712	[optimization] deleted and backwardscompatible	2015-11-09 13:27:24 +00:00
Max Zwiessele	850c10beaa	[pickle] load errors bc of kernel changes, backwards compatibility issues fixed	2015-11-09 10:09:07 +00:00
Zhenwen Dai	2bf1be5500	bug fix for lbfgs with max_iters big than 15000	2015-11-02 21:18:56 +00:00
Alan Saul	3dba1c05de	Added Z_tilde contribution for EP, now log_marginal is correct, need to check for var_dtc case	2015-10-22 16:19:27 +01:00
Alan Saul	5b4abf4c34	Fixing bernoulli likelihood for Laplace, fixing Zep for EP, and starting working on quadrature limits	2015-10-19 19:29:57 +01:00
Max Zwiessele	29921e1c69	Revert "[pickling] _src -> src" ... This reverts commit 4cd16a86b4.	2015-10-16 15:06:10 +01:00
Max Zwiessele	4cd16a86b4	[pickling] _src -> src	2015-10-16 14:56:32 +01:00
mzwiessele	568a38dfba	[dir] structure preserved	2015-10-15 15:13:16 +01:00
mzwiessele	dce82847a7	[paramz] fully integrated all tests running	2015-10-15 14:59:57 +01:00
mzwiessele	3833ac5a49	Merge branch 'devel' into plot_density	2015-10-11 14:05:09 +01:00
mzwiessele	e0d48a0558	[plotly] starting plotly	2015-10-07 11:35:23 +01:00
Alan Saul	e1b1faa133	Merge branch 'devel' of github.com:SheffieldML/GPy into devel	2015-10-04 12:28:10 +01:00
Alan Saul	2dc1b14934	New difference method for laplace	2015-10-04 12:28:07 +01:00
Zhenwen Dai	e6261c787c	add original bfgs optimizer and add rbf with inverse lengthscale	2015-10-02 22:43:54 +01:00
Zhenwen Dai	cb1f6f1486	remove the automatic importing mpi4py	2015-09-23 16:25:39 +01:00
Max Zwiessele	111895f03a	Merge branch 'devel' of github.com:SheffieldML/GPy into devel	2015-09-18 16:21:59 +01:00
Max Zwiessele	637be86369	[yak shaving]	2015-09-18 16:21:31 +01:00
Zhenwen Dai	09571e9264	add adadelta as an optimizer	2015-09-18 13:49:47 +01:00
Max Zwiessele	383cf41dab	[#186] fixed distribution across files and added base class for reusability	2015-09-11 17:13:21 +01:00
Max Zwiessele	69f6cfa6f7	[inference] changed gaussian variance to precision (which it really is)	2015-09-11 16:59:55 +01:00
Max Zwiessele	8132084de6	[ep] now calling exact inference instead of copying code	2015-09-11 15:47:07 +01:00
Max Zwiessele	1d354f5cce	[classification] sparse gp classification and dtc update	2015-09-11 15:08:30 +01:00
Mike Croucher	b8d5efface	Python 3 fixes	2015-09-09 11:43:59 +01:00
Max Zwiessele	cbcb9208b5	Merge branch 'master' into devel	2015-09-09 08:07:37 +01:00
Max Zwiessele	5e8a3aef26	Merge branch 'devel' of github.com:SheffieldML/GPy into devel	2015-09-09 08:07:31 +01:00
Zhenwen Dai	a4db6d68a6	bug fix for the print function in samplers.py	2015-09-08 22:11:17 +01:00
Alan Saul	88855d3c94	Removed annoying print	2015-09-08 18:07:57 +01:00
Max Zwiessele	cf2673632b	[merge] merge master into devel	2015-09-08 17:25:44 +01:00
Mike Croucher	ec7334846c	Python 3 fixes	2015-09-07 15:18:45 +01:00
Mike Croucher	c47c63b408	Python 3 fixes	2015-09-07 14:07:09 +01:00
mikecroucher	61162e15fa	Merge pull request #227 from Dapid/clean_imports ... Clean some imports	2015-09-04 18:18:01 +01:00
James Hensman	56acbf4e0a	slightly improved computation for var_Gauss method	2015-09-04 15:11:50 +01:00
David Menéndez Hurtado	6916c48b14	Cleanup unused imports	2015-09-04 14:43:34 +02:00