Commit graph

6031 commits

Author SHA1 Message Date
Eric Kalosa-Kenyon
55c2d66c99
updated osx to macOS 10.15.7, JDK to 14.0.2, and XCode to Xcode 12.2 (#904)
The CI  was broken. This commit fixes the CI. The root cause is reported in more detail in issue #905.

In short, the default macOS version (10.13, see the TravisCI docs) used in TravisCI isn't supported by brew which caused the brew install pandoc in the download_miniconda.sh pre-install script to hang and time out the build. It failed even on inert PRs (adding a line to README, e.g.). Now, with the updated macOS version (from 10.13 to 10.15), brew is supported and the brew install pandoc command succeeds and allows the remainder of the CI build and test sequence to succeed.
2021-05-11 09:37:07 -07:00
Eric Kalosa-Kenyon
562266f46c
adding to_dict() method to Ornstein-Uhlenbeck (OU) kernel
This method was missing, causing serialization functionality that uses it to raise an AttributeError. This commit implements the missing method.
2021-05-11 09:35:53 -07:00
Eric Kalosa-Kenyon
434e1b0f5e updated cython-generated c files for python 3.9 via `pyenv virtualenv 3.9.1 gpy391 && pyenv activate gpy391 && python setup.py build --force 2021-03-15 21:27:38 +00:00
Eric Kalosa-Kenyon
9c69b8c6fe added python 3.9 build following 4aa2ea9f5e to address https://github.com/SheffieldML/GPy/issues/881 2021-03-15 21:27:38 +00:00
gehbiszumeis
b906719325 fix: minor typos in README !minor 2021-03-08 13:52:23 +01:00
gehbiszumeis
98fef6d622 new: Added to_dict() method to Ornstein-Uhlenbeck (OU) kernel 2021-03-08 13:52:22 +01:00
Neil Lawrence
426ba1dc27
Update README.md 2020-11-16 10:43:36 +00:00
bobturneruk
04a9d9d994 remove deprecated parameter 2020-11-16 10:41:16 +00:00
Zhenwen Dai
ec20f9ed3a
Add the link to the api doc on the readme page. 2020-06-26 11:39:28 +01:00
Julien Bect
44f4739efb maint: Wrap very long lines (> 400 chars) 2020-06-24 16:22:19 +01:00
Julien Bect
d754bc12de maint: Wrap very long lines (> 450 chars) 2020-06-24 16:22:19 +01:00
Julien Bect
1d549ca5c6 dpgplvm.py: Fix typo in the header 2020-06-23 22:32:02 +01:00
Julien Bect
c23a1a0eb4 dpgplvm.py: Wrap long line + remove tabs 2020-06-23 22:32:02 +01:00
Neil Lawrence
fd24245b12
Merge pull request #846 from jbect/remove-tabs
maint: Remove tabs (and some trailing spaces)
2020-06-20 11:37:35 +01:00
Julien Bect
0a9b1cc10d maint: Remove tabs (and some trailing spaces) 2020-06-20 08:11:01 +02:00
Neil Lawrence
490c4c73f5
Merge pull request #829 from jbect/init-super
Use super().__init__ consistently
2020-06-19 11:16:43 +01:00
Neil Lawrence
ef9562c51a
Merge pull request #832 from jbect/improve-badges
Improve badges
2020-06-19 11:14:48 +01:00
Neil Lawrence
4b947c4d5c
Merge pull request #836 from RSE-Sheffield/package-level-info
Document at package level
2020-06-19 11:13:27 +01:00
bobturneruk
923343dcc2 latent function inference intro and format 2020-06-18 14:41:06 +01:00
bobturneruk
ef044197fb parameterization of priors 2020-06-18 14:41:06 +01:00
bobturneruk
e0304056f9 correct likelihod definition 2020-06-18 14:41:06 +01:00
bobturneruk
9fee83fdb0 compromise formatting for sphinx 2020-06-18 14:41:06 +01:00
bobturneruk
3684e64ac2 introduction for utils package 2020-06-18 14:41:06 +01:00
bobturneruk
159ca2eba6 more on examples 2020-06-18 14:41:06 +01:00
bobturneruk
f9aeffdba3 build with dot 2020-06-18 14:41:06 +01:00
bobturneruk
dec5bf8cef using pods 2020-06-18 14:41:06 +01:00
bobturneruk
f62a487f24 architecture diagram 2020-06-18 14:41:06 +01:00
bobturneruk
cf11962f05 neater contents 2020-06-18 14:41:06 +01:00
bobturneruk
86a87f3397 clarification 2020-06-18 14:41:06 +01:00
bobturneruk
e03cef43a6 summarise plotting 2020-06-18 14:41:06 +01:00
bobturneruk
b0c18a90a4 add plotting to docs index 2020-06-18 14:41:06 +01:00
bobturneruk
3e6cc2888d placeholder 2020-06-18 14:41:06 +01:00
bobturneruk
4e411c4b26 likelihoods 2020-06-18 14:41:06 +01:00
bobturneruk
14f0e08f9e better kernel description 2020-06-18 14:41:06 +01:00
bobturneruk
4a64e3260e kern not kern.src in index 2020-06-18 14:41:06 +01:00
bobturneruk
27ccdc74ee moved doc back from kern.src to kern 2020-06-18 14:41:06 +01:00
bobturneruk
24549e8c7d kernel docs to kern.src 2020-06-18 14:41:06 +01:00
bobturneruk
2b22d4027a more on models 2020-06-18 14:41:06 +01:00
bobturneruk
1d97744cf6 inheritance diagrams 2020-06-18 14:41:06 +01:00
bobturneruk
f2f1c0d7ff introduction 2020-06-18 14:41:05 +01:00
bobturneruk
b39895644e redunant block 2020-06-18 14:41:05 +01:00
bobturneruk
3b67ecfe30 better syntax 2020-06-18 14:41:05 +01:00
bobturneruk
0e8fcfa319 layout changes for diagrams
resolve conflict
2020-06-18 14:41:05 +01:00
bobturneruk
14cfd95be8 higher res diagrams 2020-06-18 14:41:05 +01:00
bobturneruk
66015895a7 lower level detail 2020-06-18 14:41:05 +01:00
bobturneruk
59a7742a9c initial core docs, class diagram 2020-06-18 14:41:05 +01:00
bobturneruk
07371cd777 add placeholder 2020-06-18 14:41:05 +01:00
bobturneruk
a312e754bd makes sense for core to go first 2020-06-18 14:41:05 +01:00
bobturneruk
3375458dbb change rst syntax 2020-06-18 14:41:05 +01:00
bobturneruk
680fd29ba4 rst "markup" 2020-06-18 14:41:05 +01:00