195 commits

Author	SHA1	Message	Date
Zhenwen Dai	3653892d19	merge devel to ties	2014-09-18 12:10:49 +01:00
James Hensman	31478d4d59	improved docsting for optimize	2014-09-17 11:22:31 +01:00
Max Zwiessele	4543fc3480	[link|unlink_parameter] renaming add_parameter to link_parameter	2014-09-08 08:57:28 +01:00
Zhenwen Dai	c9f3d652b7	Merge branch 'devel' of github.com:SheffieldML/GPy into ties ... for new bug fix	2014-09-05 14:36:15 +01:00
mzwiessele	a358c51829	[printing] added model details for printing	2014-09-05 14:21:34 +01:00
Zhenwen Dai	df1be1a5f6	Merge branch 'devel' of github.com:SheffieldML/GPy into ties	2014-09-04 14:18:35 +01:00
Zhenwen Dai	a506f4a605	replace _fixes_ _has_fixes_ for support of tie	2014-09-04 13:31:53 +01:00
Zhenwen Dai	39327e0789	the merging of two tie objects are done	2014-09-03 17:24:32 +01:00
Zhenwen Dai	e46f3b342e	remove the print message in model.checkgrad	2014-09-02 12:33:52 +01:00
Zhenwen Dai	808cfb0501	Allow the default constraint of a Param object to be 'fixed'	2014-09-02 11:52:09 +01:00
Zhenwen Dai	1110cc31e6	some progress for parameter tie	2014-08-29 18:52:53 +01:00
mzwiessele	93b92111f8	[minor] minor changes	2014-08-05 08:28:03 -07:00
James Hensman	51e48f7508	fixed a bug in optimize restarts: it now used optimizer_array	2014-07-16 09:40:44 +01:00
mzwiessele	8a8818aa91	yak shaving and whitespaces	2014-06-30 10:26:17 -07:00
mzwiessele	431f67a8e3	[optimize] bugfix	2014-06-30 09:24:26 -07:00
mzwiessele	94bff66c7b	[optmimize] bugfix	2014-06-20 12:10:21 -07:00
mzwiessele	73d9118043	[whitespaces] & [opt] minor fix of optimizer, when Optimizer is provided (set model to self)	2014-06-20 10:28:32 -07:00
mzwiessele	eaa18e3512	[model] optimizer can now be an optimizer instance, instead of a string	2014-06-19 12:07:58 -07:00
mzwiessele	5a2bc4863b	[optimizer] one copy for the optimizer in optimizer_array, use this instead of _set|get_params_transformed	2014-05-22 11:39:04 +01:00
Max Zwiessele	24a34aee95	[model] exactly two parameter copy in memory	2014-05-21 16:33:44 +01:00
Max Zwiessele	58a05f37b7	[latentfunctioninference] superclass LatentFunctionInference added, which contains a call just before and just after optimization	2014-05-15 14:06:00 +01:00
Max Zwiessele	68a8c3a691	gradient can be zero and two parameter cancellation is caught	2014-03-31 14:09:47 +01:00
Max Zwiessele	59ff2c8d00	gradient can be zero and two parameter cancellation is caught	2014-03-31 14:09:06 +01:00
Max Zwiessele	f3b74fa85f	pickling and caching	2014-03-31 12:45:09 +01:00
James Hensman	a74965b038	moved input_sensitivity to the gp class	2014-03-27 10:08:45 +00:00
Max Zwiessele	3db095338d	objective function seperate from calls for optimizer	2014-03-24 13:32:56 +00:00
Max Zwiessele	29ff406c08	objective_function now standalone and only internal robust optimization loop	2014-03-24 12:41:10 +00:00
Max Zwiessele	3e5e3a099e	checkgrad is zero test	2014-03-14 11:32:08 +00:00
James Hensman	da4303f71b	bugfix for grad_dict	2014-03-14 10:29:14 +00:00
James Hensman	f50b121d4d	Alans change to checkgrad	2014-03-13 17:05:46 +00:00
Max Zwiessele	1f9509d979	testing a bit cleaned periodic is turned off, bc it need different tests, discontinuous still needed	2014-03-13 13:13:15 +00:00
Max Zwiessele	53e071b892	gradient check and debug options	2014-03-12 12:06:21 +00:00
Max Zwiessele	85a471e0f6	oh huge bug in checkgrad global	2014-03-11 16:22:45 +00:00
Max Zwiessele	cf5c6bf227	checkgrad divide by zero catches	2014-03-05 13:01:41 +00:00
Max Zwiessele	988bad88a3	numerical global diff in gradcheck	2014-03-05 12:50:46 +00:00
Max Zwiessele	f5e3e97794	gradcheck global diff	2014-03-05 12:44:53 +00:00
Max Zwiessele	0df263956f	Dont call parameters_changed ever yourself anymore and parameters are now inplace once in memory	2014-03-04 17:32:46 +00:00
Zhenwen Dai	b9dcb7f640	switch input_sensitivity function to model	2014-03-04 14:25:11 +00:00
Max Zwiessele	20e02e63a9	global gradient test done and some parameterized fixes	2014-02-28 16:58:24 +00:00
Max Zwiessele	eae3c28dc0	checkgrad	2014-02-28 16:20:52 +00:00
Max Zwiessele	47e4026141	hierarchy edits. adding removing parameters withing hierarchy	2014-02-28 16:18:47 +00:00
Max Zwiessele	2771e3f71f	observer pattern has a handle to trigger only > min_priority observers	2014-02-28 11:33:31 +00:00
James Hensman	f6da5345d9	plot latent updated	2014-02-26 09:16:31 +00:00
Max Zwiessele	659643038f	parameterized now supports deleting of parameters	2014-02-21 17:53:44 +00:00
Max Zwiessele	c4f6b0dbe7	copy and missing data	2014-02-19 15:32:16 +00:00
Max Zwiessele	f21e8e2394	roundtrip error fixed for likelihood tests	2014-02-14 13:43:43 +00:00
Max Zwiessele	b1c98c2c3d	Priors added	2014-02-14 13:18:48 +00:00
Max Zwiessele	8d7273b8ff	non verbose checkgrad adjusted to new system	2014-02-14 09:57:18 +00:00
Max Zwiessele	ffd09c7820	checkgrad (╯°□°）╯︵ ┻━┻	2014-02-13 21:59:08 +00:00
Max Zwiessele	9af4c34f90	gradcheck fixes are not easy	2014-02-13 21:14:08 +00:00