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Author	SHA1	Message	Date
Max Zwiessele	70a9a26d7e	[core] updating system, security branching	2015-09-02 09:06:17 +01:00
Alan Saul	81ef734908	Reindented, did some profiling which looks promising	2015-09-02 10:46:30 +03:00
Alan Saul	6ea3310c74	Merge branch 'devel' into missing_opt	2015-09-02 09:58:36 +03:00
Alan Saul	7861f2f9f6	Merge branch 'devel' of https://github.com/SheffieldML/GPy into devel	2015-09-02 09:58:22 +03:00
James Hensman	ce9ee6c758	ensuring the shape of the mean vector at predict time fixes bug in EP prediction	2015-09-01 22:38:49 +01:00
Alan Saul	8e660c3491	Merge branch 'devel' of https://github.com/SheffieldML/GPy into devel	2015-09-01 19:18:25 +03:00
Alan Saul	50b9e4dc82	corrected caching for psi derivatives	2015-09-01 19:17:56 +03:00
Alan Saul	3818aa3745	Try calculating dL_dpsi1*psi1 individually for each dimension as we go along	2015-08-31 14:13:35 +03:00
Alan Saul	c83f56723e	passing psi statistics	2015-08-30 22:22:27 +03:00
Max Zwiessele	938cc49aed	Merge branch 'devel' of github.com:SheffieldML/GPy into devel	2015-08-28 16:28:25 +01:00
Max Zwiessele	4bd99c674f	[heteroscedastic gauss] Implemented Heteroscedastic Guassian Lik with @ric70x7	2015-08-28 16:28:01 +01:00
Max Zwiessele	0d32652c88	[heteroscedastic gauss] Implemented Heteroscedastic Guassian Lik with @ric70x7	2015-08-28 16:26:55 +01:00
Alan Saul	1a2b194aa2	Removed comment	2015-08-28 14:23:44 +03:00
Alan Saul	b89196c7cf	Checking kerngrads full_value	2015-08-28 14:03:14 +03:00
Alan Saul	e12575c0c6	Gradients for X seem to match	2015-08-28 11:47:10 +03:00
Alan Saul	afba8d5c5e	Made sparse gp work again	2015-08-28 10:07:19 +03:00
Zhenwen Dai	9564287cf3	add MRD for regression benchmark	2015-08-27 17:38:45 +01:00
Alan Saul	5f119d0918	Tidied but broken	2015-08-27 19:08:11 +03:00
Zhenwen Dai	8f78431983	remove the old housing benchmark	2015-08-27 17:05:29 +01:00
Zhenwen Dai	81cdc8b49d	Merge branch 'devel' of github.com:SheffieldML/GPy into devel	2015-08-27 17:05:01 +01:00
Zhenwen Dai	60aa865631	add the regression benchmark	2015-08-27 17:04:52 +01:00
Alan Saul	4143f00540	Optimizing missing data model, needs tidying but now much faster	2015-08-27 17:56:08 +03:00
James Hensman	ea07870e81	fixed random seed for kronecker tests	2015-08-27 12:00:55 +01:00
James Hensman	6b5a027047	adding a white kernel to a sparseGP test for stability	2015-08-27 11:53:30 +01:00
Alan Saul	12c335c62e	Fixed array2string bug for N > 1000 default printing	2015-08-25 17:30:09 +03:00
David Menéndez Hurtado	13438f1c10	Fixing the blas arguments for DSYRK	2015-08-24 14:27:41 +02:00
David Menéndez Hurtado	3746af7729	Fixing confussion between lapack and ctypes interfaces	2015-08-24 13:30:05 +02:00
David Menéndez Hurtado	ba2ea3eb73	FIX: now Scipy 0.16 is required, removing fixes for older versions. Accessing blas through the scipy interface	2015-08-24 12:56:18 +02:00
Zhenwen Dai	f221a3b1fa	add missing file	2015-08-20 17:35:22 +01:00
Zhenwen Dai	0e01474aec	Merge branch 'devel' of github.com:SheffieldML/GPy into devel	2015-08-20 17:33:56 +01:00
Zhenwen Dai	1d2b771e09	psi-statistics for any kernels via Gaussian quadrature	2015-08-20 17:33:49 +01:00
Ricardo Andrade	0d995a56b2	gradients w.r.t. kappa corrected ... np.diag(dL_dK_small) needs to be copied	2015-08-19 16:00:31 +01:00
Alan Saul	80161665b8	Trying to make travis print warnings	2015-08-19 10:10:41 +01:00
Alan Saul	624d65493c	Fixed laplace seed, added debugging for misc tests	2015-08-18 17:41:25 +01:00
James Hensman	33d8441ac8	Merge branch 'devel' of github.com:/sheffieldml/gpy into devel	2015-08-18 17:12:21 +01:00
James Hensman	60b5f071b4	sqrt(pi) term fix in Bernoulli	2015-08-18 17:11:54 +01:00
Alan Saul	94b33a6151	Removed installation conflict	2015-08-18 16:59:20 +01:00
Alan Saul	0edf614220	Updated travis for 0.16 scipy	2015-08-18 16:54:42 +01:00
Alan Saul	2d14f1608d	Added variational expectation tests updates	2015-08-18 16:30:17 +01:00
Alan Saul	fa01d29f69	Merge branch 'devel' of https://github.com/SheffieldML/GPy into devel	2015-08-18 16:29:49 +01:00
Alan Saul	da5de6b814	Added fallback for non-identity link function for Gaussian variational expectations	2015-08-18 16:29:44 +01:00
James Hensman	72a5eb3fc1	adding var_gauss.py	2015-08-18 16:18:01 +01:00
Alan Saul	51092854fc	Added testing of variational expectations, analytic vs numeric, and gradient checks	2015-08-18 16:03:45 +01:00
James Hensman	7ba26eda1c	the Opper-Archambeau method is now implemented as an inference method in the GPy style	2015-08-18 11:39:27 +01:00
James Hensman	ea3bfbb597	minor bugfixes in plotting: quantiles are now computed using predict_kw ... correctly	2015-08-18 08:00:47 +01:00
Zhenwen Dai	097b048100	improve the stability of parallel inference code	2015-08-17 17:49:37 +01:00
James Hensman	5c35d70a56	Merge branch 'devel' of github.com:/sheffieldml/GPy into devel	2015-08-17 16:32:35 +01:00
James Hensman	c79c74a2d6	tidied link_fn tests	2015-08-17 16:32:27 +01:00
Alan Saul	65b6e54d5c	Merge branch 'devel' of github.com:SheffieldML/GPy into devel	2015-08-17 16:06:47 +01:00
Alan Saul	070137504a	Added full cov prediction	2015-08-17 16:06:43 +01:00