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Author SHA1 Message Date
Max Zwiessele
156ba00719 [bgplvm&mrd] missing data greatly improved, still not there yet 2014-05-21 16:32:06 +01:00
Zhenwen Dai
04ab93a961 BayersianGPLVM mpi support 2014-05-21 12:44:24 +01:00
Alan Saul
a0d6634387 Added a numpy version of univariate gaussian, untested 
and is significantly slower but may be useful soon.
 2014-05-21 11:30:52 +01:00
Zhenwen Dai
52c0be1848 merge devel branch in 2014-05-21 10:38:34 +01:00
Zhenwen Dai
a2203179f6 [psi2] implement RBF cpu 2014-05-21 10:34:51 +01:00
Max Zwiessele
b520eb212c [fixing] fixing now saves the old constraint 2014-05-20 16:39:52 +01:00
Max Zwiessele
c507cfe4ab [index operations] added lookup for properties for a given index as dict <properties, subindex> for given index 2014-05-20 16:06:56 +01:00
Max Zwiessele
ef256223d1 [mrd] more control for init, some missing data adjustements, init greatly improved 2014-05-20 14:49:20 +01:00
Max Zwiessele
995de897b3 [core updates] first try to switch updates off and on. Use m.updates = False to switch updates off, and vice-versa 2014-05-20 14:48:53 +01:00
Max Zwiessele
1ebcee967a [psi-stats] add kernel was missing a psi zero call 2014-05-20 14:47:57 +01:00
Max Zwiessele
76718a8fcc [stationary] input_sensitiviy is now 1/(l**2) 2014-05-20 14:47:28 +01:00
Max Zwiessele
533e5fb744 [datasets] delete packed data in hapmap dataset 2014-05-20 14:46:29 +01:00
Max Zwiessele
99699e9e02 [vardtc missing data] can handle non broadcastable selections 2014-05-20 14:46:03 +01:00
Max Zwiessele
8c8d06c8ae [pca] colors now as iterator 2014-05-20 14:44:59 +01:00
Max Zwiessele
dfa23b77c5 [posteriot] adjusted for more then one covariance per output 2014-05-20 14:43:58 +01:00
Max Zwiessele
dafad62363 [lmv_dimselect] we need to keep a pointer to the lvm_dimselect object, as the updates are weak references: dim_select = ... 2014-05-20 14:43:18 +01:00
Zhenwen Dai
001db6b089 [mpi] enable checkgrad 2014-05-18 10:05:35 +01:00
Zhenwen Dai
e7177b6d37 [mpi] fix the bug of mpi 2014-05-17 22:18:00 +01:00
Ricardo
ba77b20a06 Bug fixed 2014-05-16 15:41:02 +01:00
Max Zwiessele
01d6b91f90 [mrd] missing data implemented, and plotting better 2014-05-16 15:12:19 +01:00
Zhenwen Dai
e6d07ad5ac fix pickle 2014-05-16 11:23:44 +01:00
Max Zwiessele
94c84a23a3 [mrd] plotting, init, inference etc. 2014-05-16 11:21:08 +01:00
Max Zwiessele
efc1f4413c [ploting] dim reduction 2014-05-16 11:20:50 +01:00
Zhenwen Dai
17b6b94db3 Logistic transformation numerical robustness 2014-05-16 10:48:18 +01:00
Zhenwen Dai
c568bad4fb bug fix for mpi SSGPLVM 2014-05-16 10:40:45 +01:00
mzwiessele
382645ff37 Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2014-05-15 18:47:26 +01:00
mzwiessele
f820e3b0bf [examples] stick demo 2014-05-15 18:47:20 +01:00
Zhenwen Dai
4ec8f464e2 merge chagnes from devel 2014-05-15 18:02:33 +01:00
Zhenwen Dai
1851a821c7 Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2014-05-15 17:56:16 +01:00
Zhenwen Dai
a796b7bc81 fix the bug in mocap demos 2014-05-15 17:56:07 +01:00
Ricardo
3d76664af0 EP is back. 2014-05-15 16:36:03 +01:00
Ricardo
a03d037736 Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2014-05-15 14:11:20 +01:00
Ricardo
bd7a80dde5 flags added 2014-05-15 14:11:11 +01:00
Ricardo
75d5209b98 minor changes 2014-05-15 14:10:24 +01:00
Max Zwiessele
dfdb1c24e6 Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2014-05-15 14:06:04 +01:00
Max Zwiessele
58a05f37b7 [latentfunctioninference] superclass LatentFunctionInference added, which contains a call just before and just after optimization 2014-05-15 14:06:00 +01:00
Zhenwen Dai
3ee2dc920c a little merge 2014-05-15 12:17:21 +01:00
Zhenwen Dai
ab501ddcba [SSGPLVM] linear kernel cpu ready 2014-05-15 12:11:55 +01:00
Zhenwen Dai
dad476faf6 [ssgplvm] linear kernel 2014-05-15 11:43:29 +01:00
Max Zwiessele
02b5ee1e46 [parameterized] restructered a lot and finalized some stuff 2014-05-15 11:29:20 +01:00
Max Zwiessele
78ae67bd47 Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2014-05-15 10:06:33 +01:00
Zhenwen Dai
b65da11df5 Merge branch 'psi2' of github.com:SheffieldML/GPy into psi2 2014-05-14 15:07:53 +01:00
Zhenwen Dai
d911766624 [mpi] add mpi into ssgplvm 2014-05-14 15:07:39 +01:00
mzwiessele
73f23c0a0d [caching] renaming of helper methods to make intention clear 2014-05-14 13:39:48 +01:00
Neil Lawrence
c291d5b2ad Merge branch 'devel' of https://github.com/SheffieldML/GPy into devel 2014-05-14 12:15:46 +01:00
mzwiessele
f26aa7da7d Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2014-05-14 11:38:03 +01:00
mzwiessele
5b8bd88acf [indexing&memory] in memory view more efficient, catching some indexing errors 2014-05-14 11:38:00 +01:00
Neil Lawrence
7293f4ca52 Add Drosophila data. 2014-05-14 11:25:07 +01:00
mu
9171909724 merge mu's changes into devel 2014-05-14 11:19:18 +01:00
James Hensman
621de63fc8 Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2014-05-14 10:05:03 +01:00