Alan Saul
e50b17a1bd
Ignore example tests
2013-12-16 18:12:04 +00:00
Alan Saul
2e5faf305d
Removed yes pipe for travis
2013-12-16 17:54:41 +00:00
Alan Saul
b49863f64f
Seems to handle without answering now
2013-12-16 17:48:36 +00:00
Alan Saul
745501a841
Reverse travis to see what it asks for
2013-12-16 17:18:33 +00:00
Alan Saul
10fcb4027b
Fixed some tests
2013-12-16 17:17:47 +00:00
Alan Saul
5db256a841
Merged and fixed conflict in ODE_UY.py
2013-12-16 16:59:03 +00:00
Max Zwiessele
57b4aaab6e
merge completed
2013-12-16 11:42:47 +00:00
Max Zwiessele
23ff53f7f8
BGPLVM with missing data
2013-12-16 11:39:39 +00:00
Max Zwiessele
a6725b55e1
pca adjustements to lvm models
2013-12-16 11:37:42 +00:00
Max Zwiessele
f9c9e8e1d5
ppca added, ppca missing data not working yet
2013-12-16 11:36:23 +00:00
Max Zwiessele
60b299bd5d
diagonal operations
2013-12-16 11:36:01 +00:00
Max Zwiessele
415e3256c0
subarray indexing
2013-12-16 11:35:47 +00:00
mu
4d360dae77
Merge branch 'devel' of https://github.com/SheffieldML/GPy into devel
2013-12-13 14:10:36 +00:00
mu
fa08d20f58
ODE UY dkdtheta
2013-12-13 14:10:03 +00:00
Andreas
2e99fa1502
Merge branch 'devel' of github.com:SheffieldML/GPy into devel
2013-12-13 14:01:06 +00:00
Andreas
4d82f30367
Small changes in svigp
2013-12-13 14:01:01 +00:00
mu
054b98d55b
UY dkdtheta
2013-12-13 13:39:28 +00:00
James Hensman
7c78358445
ensure_defaiult constraints in svigp
2013-12-12 15:45:35 +00:00
Alan Saul
997b5d596d
Bug in ODE_UY fix
2013-12-12 15:35:59 +00:00
mu
c793e5d916
UY dkdtheta
2013-12-11 16:24:35 +00:00
Alan Saul
990dab77ff
Merge branch 'devel' of github.com:SheffieldML/GPy into devel
2013-12-11 15:48:07 +00:00
James McMurray
b6d8617d04
Adding data_resources.json to setup data files
2013-12-11 15:45:27 +01:00
James McMurray
4f3e9f2bf7
Testing modification for ReadTheDocs to stop docstring errors
2013-12-11 13:27:54 +01:00
Nicolo Fusi
45f76cc532
removed print statements from config parser, commented out ODE kerns
2013-12-10 14:32:30 -08:00
Nicolo Fusi
b984acaa80
Merge branch 'devel'
2013-12-10 14:08:28 -08:00
Nicolo Fusi
ebd2752d5b
Merge branch 'devel'
2013-12-10 14:07:18 -08:00
mu
9b32fd47ee
Merge branch 'devel' of https://github.com/SheffieldML/GPy into devel
2013-12-10 17:12:23 +00:00
mu
bab477f149
ode UY
2013-12-10 17:07:37 +00:00
mu
cb36368d13
dk dparameter
2013-12-10 12:38:34 +00:00
Alan Saul
eba553fe2c
Fixed the numerical quadrature, won't work with large f unless normalized
2013-12-04 14:33:16 +00:00
Alan Saul
f8707c3918
Fixed lots of breaking tests, reduced step size for checkgrad to 1e-4 in tests (perhaps this should be global), added some missing attributes to data_resources.json
2013-12-04 12:44:13 +00:00
Alan Saul
cb6c1dd0d2
Set warnings for truncated hessian, it has been noted that that by
...
truncating we can have incorrect posteriors, though at convergence
this should not be a problem, could be fixed by not using Cholsky
as the decomposition as it cannot handle non-positive definite mats
2013-12-03 15:21:45 +00:00
Neil Lawrence
4a751fd2da
Added some more error checking for downloading datasets.
2013-11-30 11:02:42 +00:00
Neil Lawrence
e349c12cf0
Fixed some bugs in mocap.py where errors weren't being raised when file format was incorrect and made datasets.py check for 404 errors which previously were occuring silently ... shhhhh
2013-11-29 18:39:14 +00:00
Neil Lawrence
7c1c50cf55
Fixed bugs in cmu_mocap loader where cmu_url was missing and loading in mocap data twice in same session led to incorrect url through copy error.
2013-11-29 17:32:08 +00:00
Alan Saul
f26455f2b2
Fixed examples tests, started changing datasets code which has a few bugs
2013-11-29 15:45:18 +00:00
Alan Saul
9e6cc7ea6e
Minor changes to naming of signitures
2013-11-29 14:45:44 +00:00
Alan Saul
98074e1e6c
Changed more examples to accept optimize and plot
2013-11-29 14:40:31 +00:00
Alan Saul
0a36d98a71
Merge branch 'devel' of github.com:SheffieldML/GPy into devel
2013-11-29 14:21:10 +00:00
Alan Saul
3cd808cccc
Added optimize and plot for classification, non_gaussian and stochastic examples
2013-11-29 14:20:59 +00:00
Alan Saul
68ece19211
Fixed gp_base and svigp for sampling (doesn't use it but needs the arguments)
2013-11-29 14:20:33 +00:00
Alan Saul
b26c62f6af
Added constant to Z_tilde, now log likelihoods are equal!
2013-11-29 12:00:37 +00:00
Alan Saul
0a43329150
Changed some parameters of the laplace, tidied up examples
2013-11-28 15:23:39 +00:00
Max Zwiessele
1b5eed890a
documenting
2013-11-28 10:54:13 +00:00
Max Zwiessele
25635571af
added comments for models module and adjusted setup
2013-11-28 10:31:17 +00:00
Max Zwiessele
622f2e29aa
Merge branch 'naniny' into devel
2013-11-28 10:03:24 +00:00
Max Zwiessele
5809293c98
rename _models to models_modules to include in doc
2013-11-28 10:02:19 +00:00
James Hensman
123a3caea9
Merge branch 'devel' of github.com:SheffieldML/GPy into devel
2013-11-27 17:02:09 +00:00
James Hensman
c86981a110
some tidying in the regression examples
2013-11-27 17:02:04 +00:00
Max Zwiessele
50e9034a6d
dimensionality reduction examples updated with optimize, plot and verbose
2013-11-27 16:12:58 +00:00