Commit graph

2501 commits

Author SHA1 Message Date
Neil Lawrence
6d5d4da133 Added covariance for input dependent noise levels (hetero.py). 2013-09-16 11:31:07 +01:00
James Hensman
1fea140df8 actually changing coregionalise to coregionalize 2013-09-16 09:55:32 +01:00
Neil Lawrence
39d2748922 Renamed coregionalise to coregionalize to make it consistent with other spellings (optimize etc.) 2013-09-15 17:01:47 +01:00
Neil Lawrence
dffa9541c2 Merged conflict of model.py 2013-09-14 20:05:42 +01:00
Neil Lawrence
00d335444d Changed kern.py so that X2 is correctly passed as None to the kern parts for dK_dX. Modified several kern parts so that dK_dX is correctly computed (factors of 2 missing). Removed spurious factors of 2 from gplvm, bcgplvm, sparse_gp and fitc code. 2013-09-14 20:02:40 +01:00
Ricardo
4bb2ea9606 coregionalisation changed to coregionalization 2013-09-14 17:23:17 +01:00
Ricardo
1bc9374717 linK2_functions2 merged 2013-09-13 18:09:59 +01:00
Ricardo
f8c9e6b982 Merge branch 'linK_functions2' into devel
Conflicts:
	GPy/core/gp.py
	GPy/core/gp_base.py
	GPy/core/sparse_gp.py
	GPy/examples/regression.py
	GPy/kern/constructors.py
	GPy/kern/parts/coregionalise.py
	GPy/models/__init__.py
	GPy/models/sparse_gp_classification.py
	GPy/util/__init__.py
2013-09-13 15:57:34 +01:00
Ricardo
304dbfad7f Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2013-09-13 13:15:57 +01:00
Ricardo
d653921bf3 Useless files deleted 2013-09-13 13:09:55 +01:00
Ricardo
f4794fb79d Moved to (sparse_)gp_multioutput_regression 2013-09-13 13:06:01 +01:00
Ricardo
c01ca1d007 Doesn't matter I'll erase this file 2013-09-13 13:03:12 +01:00
Ricardo
329da293f8 duplicated line erased 2013-09-13 13:00:54 +01:00
Ricardo
34bac4fa40 Sparse multiple outputs model with Gaussian noise 2013-09-13 12:51:05 +01:00
Ricardo
277601d556 Multiple outputs model with Gaussian noise 2013-09-13 12:50:41 +01:00
Ricardo
62daa978d3 Likelihood gradients for heteroscedastic noise 2013-09-13 12:45:58 +01:00
Ricardo
ea7c18fccc Changes in plot functions, to allow 1D multiple outputs visualization 2013-09-13 12:36:32 +01:00
Ricardo
f0569d6d88 docstrings in new functions 2013-09-13 12:35:12 +01:00
Ricardo
86b5b3aa05 works well now 2013-09-13 12:33:16 +01:00
Ricardo
6299b219b5 redundant variable eliminated 2013-09-13 12:32:11 +01:00
Ricardo
81eb22dffd R paramter renamed as W_columns, and Nout renamed as num_outputs 2013-09-13 12:31:16 +01:00
Ricardo
c941da9d3c new files added 2013-09-13 12:29:53 +01:00
Ricardo
cf2cf67ed2 build_cor_kernel is now called build_lcm 2013-09-13 12:29:08 +01:00
Ricardo
79aef1707f docstring completed 2013-09-13 12:28:04 +01:00
Ricardo
6533f7792f changes according to new likelihoods definition 2013-09-13 12:26:50 +01:00
Ricardo
1b54365f7c errors fixed 2013-09-13 12:25:53 +01:00
Ricardo
b739a10562 docstrings completed 2013-09-12 16:18:29 +01:00
Ricardo
e35cc76895 docstrings completed 2013-09-12 16:04:46 +01:00
James Hensman
a99dccaab7 fixed args to bfgs 2013-09-12 13:30:20 +01:00
James Hensman
0070a73004 Fixed Alans checkgrad bug 2013-09-12 10:20:28 +01:00
Ricardo
822fd4f622 bug fixed 2013-09-11 16:36:11 +01:00
Ricardo
ef072f235c Step function modified, now the output is either 1 or -1 2013-09-11 16:06:05 +01:00
Ricardo
3608290350 Step transformation added 2013-09-11 16:00:20 +01:00
Ricardo
671591fa96 New Gaussian likelihood for multiple outputs 2013-09-04 18:06:14 +01:00
Max Zwiessele
7a68950e3e correcterd minor errors (imports etc) 2013-09-04 10:02:38 +01:00
Max Zwiessele
acb06941b4 pep8'ed transformations module 2013-09-04 09:34:56 +01:00
Max Zwiessele
2558418b08 mrd_sim stable and deprecated 2013-09-03 10:07:03 +01:00
Max Zwiessele
b42a6da835 expectation test slicing 2013-09-03 10:06:14 +01:00
Max Zwiessele
1d37b31bea only compare Z cache once 2013-09-03 10:05:42 +01:00
Max Zwiessele
58fbc70a38 Merge branch 'devel' of github.com:SheffieldML/GPy into devel 2013-09-03 10:04:38 +01:00
Max Zwiessele
a3d43553df added slicing to kern.py 2013-09-03 10:04:33 +01:00
Neil Lawrence
2e6cac0d34 Merge branch 'devel' of https://github.com/SheffieldML/GPy into devel 2013-09-02 13:35:01 +01:00
Neil Lawrence
bd4c7f34ea Added gibbs.py, although test is still failing. 2013-09-02 13:34:48 +01:00
Max Zwiessele
917a4ebed3 cleaned up imports 2013-09-02 11:56:56 +01:00
Max Zwiessele
66167fb3e9 removed white kernel, bc of likelihood variance 2013-09-02 11:54:50 +01:00
Max Zwiessele
a11ce740f7 plotting adjusted 2013-09-02 11:54:08 +01:00
Max Zwiessele
57eda0b77c added print m and print m.all differentiation 2013-09-02 11:53:45 +01:00
Ricardo
3dc7574c50 Error in plot corrected 2013-08-31 01:30:31 +01:00
Neil Lawrence
549f64892e Merge branch 'devel' of https://github.com/SheffieldML/GPy into devel 2013-08-29 19:57:37 +02:00
Neil Lawrence
bdc8ee45a7 Fixed gplvm unittest which was sampling an output matrix of size input_dim (and corresponding error in bcgplvm unittest which was based on it). 2013-08-29 19:57:25 +02:00