James Hensman
eee4b9c45f
various stability working on sparse GP (with MZ)
2013-05-03 17:06:26 +01:00
Max Zwiessele
8fb9ab5610
BGPLVM example MATLAB compare
2013-05-03 14:57:03 +01:00
Max Zwiessele
02b3f41680
Merge branch 'devel' into mrd
2013-05-03 14:39:48 +01:00
Max Zwiessele
f4b997beb8
last opt updates and tests
2013-05-03 14:38:42 +01:00
Max Zwiessele
5321bfc8c9
some minor example modifications and cgd adjustments
2013-05-03 14:22:18 +01:00
James Hensman
bc99d57f8d
Merge branch 'devel' of github.com:SheffieldML/GPy into devel
2013-05-03 14:01:40 +01:00
James Hensman
d9252d0e36
cholesky update for RA
2013-05-03 14:00:22 +01:00
Max Zwiessele
9229100af7
added @testing.deepTest property for skipping tests for deep scan only
2013-05-03 13:41:36 +01:00
Max Zwiessele
f5c477563b
testing updates
2013-05-03 13:36:33 +01:00
Max Zwiessele
ecf0dc0680
linear psi2 statistics done, all gradients working
2013-05-03 13:36:04 +01:00
Max Zwiessele
914bdc73d8
added absolute difference check to gradcheck
2013-05-03 13:35:41 +01:00
Max Zwiessele
40c9790529
Mu to go
2013-05-03 10:20:29 +01:00
Max Zwiessele
7529eee5ca
Mu to go
2013-05-02 17:21:43 +01:00
Max Zwiessele
83bde47d55
merge devel into mrd > transformations added
2013-05-02 16:40:39 +01:00
Max Zwiessele
5051a2fc89
correcting linearCF, mu to go
2013-05-02 16:37:47 +01:00
James Hensman
7561c4c232
fixed a bug in all_constrained_indices
2013-05-02 16:13:39 +01:00
Ricardo
f1e3cfaed0
error bars fixed
2013-05-02 16:04:15 +01:00
Ricardo
485665241f
auto_scale option for heteroscedastic noise
2013-05-02 15:53:38 +01:00
James Hensman
9ad17cb811
Merge branch 'devel' of github.com:SheffieldML/GPy into devel
2013-05-02 10:59:36 +01:00
James Hensman
350c69799d
fixed a tie-bug for ND
2013-05-02 10:59:19 +01:00
Nicolas
a286326e23
typo corrected for negative constrains
2013-05-01 17:43:03 +01:00
James Hensman
34edbd1459
added file:transformations
2013-05-01 17:11:13 +01:00
Max Zwiessele
42474f0044
LinearCF Psi Stat not working yet, strange bug in psi computations
2013-05-01 17:09:38 +01:00
James Hensman
9df555b51b
eigenvalue decomposition of psi2
2013-05-01 15:08:55 +01:00
James Hensman
db3646c3f3
Merge branch 'devel' into new_constraints
...
Conflicts:
GPy/core/model.py
GPy/core/parameterised.py
2013-05-01 12:07:35 +01:00
James Hensman
814fa2f138
whitespace
2013-05-01 11:13:17 +01:00
James Hensman
b49bea2954
fixed bug in constrain_fixed where soem values weren't deleted
2013-05-01 11:12:06 +01:00
James Hensman
0ddf308d11
fixed has_uncertain_inputs weirdness
2013-05-01 11:11:23 +01:00
James Hensman
94b199e3c7
improved stability of sparse GP for certain-input case
2013-05-01 11:10:46 +01:00
James Hensman
83510e7515
first attemot at the new constraint framework
2013-04-30 11:25:57 +01:00
Max Zwiessele
c502b66ea3
restructuring and merge with devel
2013-04-30 10:09:30 +01:00
Max Zwiessele
cfc11e271e
added sample dataset for BGPLVM Matlab comparison
2013-04-30 09:57:23 +01:00
Max Zwiessele
6a389493cd
Merge branch 'devel' of github.com:SheffieldML/GPy into devel
2013-04-30 09:55:35 +01:00
Neil Lawrence
e941c949e5
Minor tidy up of names in visualize (replace histogram with bar chart in lvm_dimselect).
2013-04-30 07:17:44 +01:00
Neil Lawrence
71114eef8c
Merge branch 'devel' of https://github.com/SheffieldML/GPy into devel
2013-04-29 21:45:42 +01:00
Neil Lawrence
33521f6763
Unification of the visualize object hierarchy and standardization of the click and move behaviour of lvm and lvm_dimselect. Set colours of input sensitivity histogram to red for left (port) and green for right (starboard).
2013-04-29 21:45:15 +01:00
Alan Saul
de57f837f4
Trying to upgrade numpy version to 1.7.1 as there was an error introduced for weave on 1.7.0 causing tests to fail
2013-04-29 20:09:18 +01:00
Alan Saul
bd346643db
Merged with master
2013-04-29 18:17:43 +01:00
Alan Saul
9de0b23f65
Plotting problematic kernel
2013-04-29 18:08:46 +01:00
Max Zwiessele
417a29b148
readded parameterized changes
2013-04-29 16:30:18 +01:00
Max Zwiessele
aaaa1b5251
model re compilation added
2013-04-29 16:21:38 +01:00
Max Zwiessele
f3f6226287
async optimize working
2013-04-29 14:07:01 +01:00
James Hensman
50a68e1a65
Yak shaving
2013-04-29 12:11:36 +01:00
Max Zwiessele
96a97ce790
Merge branch 'devel' into mrd
2013-04-29 11:39:29 +01:00
Max Zwiessele
2218eeece2
added conjugate gradient descent asunc
2013-04-29 11:38:40 +01:00
James Hensman
5fca43f980
more stabilisation of sparse GP
2013-04-29 11:37:08 +01:00
James Hensman
23bde6f3dd
removed uncollapsed sparse GP. superceeded by the forthcoming svigp package
2013-04-29 09:11:36 +01:00
James Hensman
6dced9ac39
reimplemented caching in prod_orthogonal...
2013-04-28 22:32:37 +01:00
James Hensman
7d9352c733
weaved coregionalise. much performance gained
2013-04-28 21:37:36 +01:00
James Hensman
52ba8e4ba3
remo0ved slices from models
...
slices are now handles by special indexing kern parts, such as
coregionalisation, independent_outputs. The old slicing functionality
has been removed simply to clean up the code a little.
Now that input_slices still exist (and will continue to be useful) in
kern.py. They do need a little work though, for the psi-statistics
2013-04-28 17:22:04 +01:00