Commit graph

4488 commits

Author SHA1 Message Date
Siivola Eero
7da9536f31 Added a new class that enables using multiple likelihoods for multioutput case (previously, Mixed noise only allowed use of multiple gaussians) 2018-02-01 10:40:20 +02:00
Siivola Eero
4f532216ad Changed two function names so that they follow the python naming convention 2018-01-24 13:40:34 +02:00
Eero Siivola
3bb905be85 Merge remote-tracking branch 'origin' into feature-multioutput 2018-01-23 15:21:45 +02:00
Eero Siivola
d7e7ed5987 Changed the structure of multioutput kernel so that it doesn't change the API of Kernels + documented the class 2018-01-23 15:21:42 +02:00
Max Zwiessele
2cd2d991ce
fix: #590
Y_normalized was not used for running optimization
2018-01-10 14:16:36 +01:00
Andrei Paleyes
ae3ea375f8 Moved posterior_covariance to Posterior class 2018-01-08 15:07:57 +00:00
Andrei Paleyes
0e2ec01839 Implemented utility function to compute covariance between points in GP Model 2018-01-05 11:40:59 +00:00
Neil Lawrence
0d26609b15
Rewrite poster_samples_f to return NxDxsize 2018-01-01 01:18:08 +01:00
Neil Lawrence
ff4f861fcb
Testing for dims should be checking whether 2nd dim is greater than 1 2017-12-31 23:22:23 +01:00
Neil Lawrence
cb1ab89d8a
Update gp.py
Sample return seemed to have been based on number of training data, not number of posterior samples requested.
2017-12-31 22:54:43 +01:00
Eero Siivola
bbf4403f18 Merge remote-tracking branch 'origin/devel' into feature-multioutput 2017-12-28 18:36:34 +02:00
Eero Siivola
e0ec507721 Added multioutput kern and tests 2017-12-28 18:06:34 +02:00
Siivola Eero
09a96fe8d7 Multioutput kernel + initial test 2017-12-27 15:35:55 +02:00
Siivola Eero
397f3ead2c Multioutput kernel + initial test 2017-12-27 15:25:50 +02:00
masashi yoshikawa
48a30a2722 modify the MLP kernel equation 2017-12-18 17:45:06 +09:00
Neil Lawrence
87df10707c
Change dtype for Python 3 in robot_wirelss 2017-12-03 09:56:14 -08:00
Zhenwen Dai
460cfd3d12 bump the version: 1.8.4 -> 1.8.5 2017-12-01 13:34:45 +00:00
Zhenwen Dai
0d56ea74d1
Merge pull request #579 from SheffieldML/multi_out_doc
Improve the documentation for LVMOGP
2017-11-29 09:54:30 +00:00
Zhenwen Dai
83d262919b add type into docstring 2017-11-28 17:27:33 +00:00
Mark Pullin
456b7cd83b Small correction to doc 2017-11-27 10:58:21 +00:00
Zhenwen Dai
a7b85fb755 Merge branch 'devel' of github.com:SheffieldML/GPy into multi_out_doc 2017-11-23 15:52:53 +00:00
Zhenwen Dai
d26c02e1b1 remove non-ascii characters 2017-11-23 10:55:43 +00:00
Zhenwen Dai
f11090ad8a improve the documentation for LVMOGP 2017-11-23 09:20:05 +00:00
Moreno
33aabdea90 Fix EP for non-zero mean GP priors 2017-11-22 10:41:01 +00:00
Jayanth Koushik
928559216c Refactor checking for cython availability 2017-11-16 20:29:49 -05:00
Alan Saul
83c3ed44e2
Merge pull request #572 from marpulli/devel
Add mean function functionality to dtc inference method
2017-11-16 11:53:11 +00:00
Zhenwen Dai
9ebb3e98c7
Merge pull request #573 from pgmoren/devel
Fix DSYR function (See https://github.com/scipy/scipy/issues/8155)
2017-11-16 11:50:10 +00:00
Alan Saul
4e1b7dfad4
Merge pull request #574 from alansaul/lyapunov_fix
Fixing scipy=1.0.0 incompatibility of lyapunov discovered in PR #573. Coverage issue should be resolved by PR #575.
2017-11-16 09:59:01 +00:00
Alan Saul
88d4a46b67
Removed ImageComparisonFailure #575
ImageComparisonFailure no longer exists which causes issues with travis testing using the most recent matplotlib
2017-11-15 18:19:32 +00:00
Alan Saul
328f29a6f0
Figured it must be a matplotlib import error #575
New import matplotlib must be missing a package
2017-11-15 16:30:27 +00:00
Alan Saul
4d1b8c2866
Testing Again #575 2017-11-15 15:34:42 +00:00
Alan Saul
d69f780348
Trying to fix tests for Matplotlib plotting issue 2017-11-15 14:24:08 +00:00
Alan Saul
a881e3da04 Updated sde_kern to work with scipy=1.0.0 2017-11-14 16:41:55 +00:00
Moreno
0cfd1cdc6e Fix DSYR function (See https://github.com/scipy/scipy/issues/8155) 2017-11-14 00:22:13 +00:00
Mark Pullin
a24a9b3edc Add mean function functionality to dtc inference method 2017-11-13 22:18:42 +00:00
Jayanth Koushik
6605b736d8 Use correct cython check in kernel_tests.py 2017-10-23 16:22:42 -04:00
Jayanth Koushik
a7af12e6ea fix: dev: cython import errors
This commit fixes issues observed in Windows where some
cython modules are successfully imported, and some are not.
This causes the global config cython.working to be inconsistent,
which causes import errors when unavailable cython modules
are tried to be imported (example
https://github.com/SheffieldML/GPy/issues/266). This commit uses
a separate flag for each module to fix the issue.
2017-10-23 15:58:17 -04:00
Zhenwen Dai
754c67f71d Merge pull request #526 from msbauer/mlp_extended
added extended version of MLP function
2017-10-18 18:11:51 +01:00
msbauer
60e5034256 Fix random seed for reproducible results in tests 2017-10-12 13:15:09 +02:00
msbauer
ef14c7a7eb updated mapping test to pass gradient checks 2017-10-12 11:56:20 +02:00
Zhenwen Dai
6eccb3764b Try to fix the issue with model_tests 2017-10-11 16:06:22 +01:00
Zhenwen Dai
673405d203 Merge with new changes from devel 2017-10-11 14:28:32 +01:00
mzwiessele
f8c3611ae6 Bump version: 1.8.3 → 1.8.4 2017-10-06 13:59:20 +01:00
mzwiessele
0ddae6103b Bump version: 1.8.2 → 1.8.3 2017-10-02 16:04:53 +01:00
mzwiessele
8826ebeb8d fix: uniform prior instantiation 2017-10-02 16:04:44 +01:00
mzwiessele
00f9ca1650 Bump version: 1.8.1 → 1.8.2 2017-10-02 14:38:02 +01:00
mzwiessele
c7e3eedd30 fix: uniform prior tests 2017-10-02 14:36:23 +01:00
mzwiessele
28487a9551 fix: uniform prior can be positive and negative, depending on lower and upper bound 2017-10-02 11:47:25 +01:00
mzwiessele
5e261657a8 Bump version: 1.8.0 → 1.8.1 2017-10-02 10:13:39 +01:00
Max Zwiessele
3d38df94d8 Paramz 0.8 2017-10-02 09:40:47 +01:00