219 commits

Author	SHA1	Message	Date
Ricardo	3d76664af0	EP is back.	2014-05-15 16:36:03 +01:00
Neil Lawrence	db644408ea	Add ordinal and attempt to fix downloads	2014-05-13 12:17:42 +01:00
Neil Lawrence	5405dbd1bc	Pre-devel-move check in	2014-04-29 15:43:35 +01:00
Neil Lawrence	643f338337	Merge kernel source.	2014-04-23 12:21:05 +01:00
Neil Lawrence	fc98a975bf	Added some missing files.	2014-04-23 12:19:46 +01:00
James Hensman	eca5577260	removed imports of files the are not added to the repo.	2014-04-23 11:03:57 +00:00
Neil Lawrence	ad5f03cf91	Part working on symbolics. Replacing data_resources.json with the correct full file (-hapmap). Don't know why we've gone for separate create file ...	2014-04-21 10:05:54 +02:00
Neil Lawrence	196732b83b	Need to fix missing data in likelihoods.	2014-04-20 23:41:04 +02:00
Neil Lawrence	583f3bef0a	First draft of base symbolic object, compiling with symbolic mapping.	2014-04-17 07:05:16 -04:00
Neil Lawrence	c2d3c82944	Copy and paste observable_array from repository to try and resolve bizzare merge request.	2014-04-14 10:00:07 +01:00
Neil Lawrence	41ef7f4c72	Ongoing changes to symbolic.	2014-04-08 06:09:30 +01:00
Neil Lawrence	9b5a1edb23	Partial changes to symbolic, including adding mapping covariance and beginning to unify code generation.	2014-04-07 10:31:13 +02:00
mzwiessele	22e4f8a1e8	not importable	2014-04-04 13:14:07 +01:00
Neil Lawrence	19b3784389	Adapt likelihoods init to check for sympy.	2014-04-03 09:15:33 +02:00
Neil Lawrence	6551c343c9	Adding missing functions file.	2014-04-03 09:10:50 +02:00
mzwiessele	ef501e4529	renamed array_core to observable array	2014-04-01 10:22:20 +01:00
Neil Lawrence	f5b8989ef5	Added negative binomial likelihood based on symbolic.	2014-04-01 07:03:01 +01:00
Neil Lawrence	292e076a9a	Added first draft of symbolic likelihood (working for a student-t example).	2014-03-31 17:51:20 +01:00
Neil Lawrence	9b2bc907e4	Adding of symbolic likelihoods (not yet fully funcitonal).	2014-03-31 09:20:03 +01:00
Neil Lawrence	6f86b9b0fa	Update of symbolic likelihoods.	2014-03-31 09:18:31 +01:00
James Hensman	22dafabca2	correct predictions in Gaussian	2014-03-21 14:15:29 +00:00
Ricardo	ab3ab6a177	Merge branch 'params' of github.com:SheffieldML/GPy into params	2014-03-20 14:42:18 +00:00
Ricardo	fcb6742b60	Merge branch 'params' of github.com:SheffieldML/GPy into params ... Conflicts: GPy/likelihoods/mixed_noise.py	2014-03-19 09:39:35 +00:00
Max Zwiessele	a307d528ef	all tests either notimplemented or known to fail	2014-03-18 17:48:09 +00:00
James Hensman	b96ff9cdfb	fixes in likelihoods	2014-03-18 17:09:47 +00:00
James Hensman	601175de2d	very weird merge conflict, including in files that I did not change	2014-03-18 16:46:37 +00:00
Ricardo	16ffc11c97	Merge branch 'params' of github.com:SheffieldML/GPy into params	2014-03-18 16:32:06 +00:00
Ricardo	b44fee93c4	function predictive_quantiles added	2014-03-18 16:02:36 +00:00
Ricardo	ef31b5f1c9	Lines not used deleted	2014-03-18 16:02:00 +00:00
Ricardo	ced160c036	default None for Y_metadata in predictive_quantiles	2014-03-18 16:01:21 +00:00
James Hensman	02872b66bd	merged	2014-03-18 12:32:03 +00:00
James Hensman	9680a139d4	changed the way the Gaussian likelihood interfaces, to enable mixed_noise things	2014-03-18 12:28:46 +00:00
Ricardo	bea74ac523	new function added	2014-03-17 18:59:37 +00:00
Ricardo	607ed98e51	Merge branch 'params' of github.com:SheffieldML/GPy into params	2014-03-17 10:30:55 +00:00
Ricardo	bb6f937881	Changes for compatiblity with changes in likelihood	2014-03-17 10:30:18 +00:00
Ricardo	8d98652e8b	Re-definition of the week	2014-03-17 10:29:25 +00:00
Ricardo	f5a5d4b25e	Re-definition of the week	2014-03-17 10:29:04 +00:00
Alan Saul	a56928e11a	Merge branch 'params' of github.com:SheffieldML/GPy into params	2014-03-14 13:19:50 +00:00
Alan Saul	7cd75ccbf5	Stablised other quadrature (should speed things up also), added sampling ability to poisson	2014-03-14 12:52:52 +00:00
Alan Saul	169fd9b8d4	Stablised exp link_function and quadrature variances	2014-03-14 12:42:36 +00:00
James Hensman	da2cceba87	plotting now seems to work for Bernouilli	2014-03-14 12:19:25 +00:00
James Hensman	77d08a7d6f	fixes to EP	2014-03-14 11:47:23 +00:00
James Hensman	c302e515e2	plotting fix	2014-03-13 16:44:39 +00:00
James Hensman	f0d97f5b84	fixed the posterior prediction for laplace ... The mis-match between the woodbury vector and KIf is still a bit of a mystery	2014-03-13 16:03:19 +00:00
James Hensman	b7508ce12b	various fixes in likelihoods, esp studentT and plotting	2014-03-13 15:35:54 +00:00
James Hensman	cc96f5b3d5	lots of fixes, including prediction being mean and variance only	2014-03-13 14:42:03 +00:00
James Hensman	ccf5167b75	chancges to where gradients are computed in laplace	2014-03-13 12:13:00 +00:00
Ricardo	4ce6d2d72c	Merge branch 'params' of github.com:SheffieldML/GPy into params ... Conflicts: GPy/core/gp.py GPy/plotting/matplot_dep/models_plots.py	2014-03-12 12:57:04 +00:00
Ricardo	6ced5b1242	GPCoregionalizedRegresssion added	2014-03-12 12:52:52 +00:00
Ricardo	45973dce10	mixed_noise added	2014-03-12 12:50:57 +00:00