362 commits

Author	SHA1	Message	Date
James Hensman	601175de2d	very weird merge conflict, including in files that I did not change	2014-03-18 16:46:37 +00:00
Ricardo	d506604c58	minor changes	2014-03-17 19:00:35 +00:00
Ricardo	d4735e54c8	minor changes	2014-03-17 10:34:08 +00:00
James Hensman	77d08a7d6f	fixes to EP	2014-03-14 11:47:23 +00:00
Ricardo	8b2cff954e	coregionalization example	2014-03-13 12:22:20 +00:00
Max Zwiessele	2200c5c30b	uncertain_inputs_example plot changed	2014-03-12 12:05:54 +00:00
Max Zwiessele	21c4d41ac3	Merge branch 'params' of github.com:SheffieldML/GPy into params	2014-03-10 08:56:17 +00:00
James Hensman	a6eae08934	manual merging	2014-03-10 08:37:59 +00:00
James Hensman	5c7caef885	tidying in likelihoods	2014-03-10 08:34:03 +00:00
Max Zwiessele	546d5dfff3	all parameters in memory	2014-03-10 08:21:13 +00:00
Zhenwen Dai	8177d63309	[SSGPLVM] new plot variational posterior	2014-03-06 16:32:19 +00:00
Alan Saul	2f5d5dd3bf	Made sampling default for non-gaussian likelihoods as a quick fix to allow plotting again for likelihoods without predictive values	2014-03-05 14:16:53 +00:00
Max Zwiessele	0df263956f	Dont call parameters_changed ever yourself anymore and parameters are now inplace once in memory	2014-03-04 17:32:46 +00:00
Alan Saul	9888d768b5	Changed kernels in tests (lots still failing, but now mostly for good reason rather than silly naming problems)	2014-03-04 11:28:29 +00:00
Alan Saul	8926ffeb28	Merge branch 'params' of github.com:SheffieldML/GPy into params	2014-03-03 17:45:28 +00:00
Alan Saul	db57005826	Fixed non_gaussian demo	2014-03-03 17:45:24 +00:00
Max Zwiessele	47e4026141	hierarchy edits. adding removing parameters withing hierarchy	2014-02-28 16:18:47 +00:00
James Hensman	2876e5a07a	work on likeluhoods and likelihoods tests	2014-02-27 15:37:31 +00:00
James Hensman	60e8f88b9b	lots of hacking on RBF	2014-02-26 10:38:09 +00:00
Max Zwiessele	d29fa56af2	merged variational posterior changes	2014-02-26 08:30:27 +00:00
James Hensman	ec6e85b1c1	mucho changes to linear.py	2014-02-26 08:24:03 +00:00
Max Zwiessele	b928044f40	sparse gp missing data	2014-02-26 08:23:35 +00:00
James Hensman	da4686dd3c	renaming: posterior_variationa -> variational_posterior	2014-02-24 19:31:13 +00:00
Max Zwiessele	b200b9fa90	input_sensitivity and ard plotting	2014-02-24 14:47:43 +00:00
Max Zwiessele	8dbb65ab50	2d plotting	2014-02-24 11:34:22 +00:00
Max Zwiessele	659643038f	parameterized now supports deleting of parameters	2014-02-21 17:53:44 +00:00
James Hensman	0dc9a32ba3	non-working grads in linear	2014-02-21 11:25:33 +00:00
James Hensman	8b2f39450b	workin gon linear kernel	2014-02-21 10:38:47 +00:00
James Hensman	847fdef9c8	merged in kern chancges	2014-02-20 14:07:54 +00:00
James Hensman	d636c8c30c	everything is broken	2014-02-20 14:04:16 +00:00
Max Zwiessele	46f59f9f64	gradients now lazy instantiated	2014-02-20 08:38:14 +00:00
James Hensman	92d71384b7	deleted kernpart, prod and add seem to work okay.	2014-02-19 17:37:18 +00:00
Max Zwiessele	c4f6b0dbe7	copy and missing data	2014-02-19 15:32:16 +00:00
Max Zwiessele	d0c563ff0a	added sparsegp with missing data	2014-02-18 15:52:33 +00:00
Max Zwiessele	ffd09c7820	checkgrad (╯°□°）╯︵ ┻━┻	2014-02-13 21:59:08 +00:00
Alan Saul	d2e8807a88	Fixed some examples and tests, and stated that Y metadata doesnt need to be the same size as Y	2014-02-12 18:02:24 +00:00
Alan Saul	46ce76dee8	Fixed bernoulli likelihood divide by 0 and log of 0	2014-02-12 16:48:57 +00:00
Max Zwiessele	9d262936c6	array core and bgplvm working > changes due to __i<op>__ will now be reported	2014-02-11 16:54:33 +00:00
Max Zwiessele	79aca59a37	parameter handling with default constraints	2014-02-11 14:44:15 +00:00
Alan Saul	b72d319909	Merged parameterized fixing	2014-02-10 15:42:47 +00:00
Alan Saul	6cbf810856	Laplace now appears to be grad checking again	2014-02-10 15:40:06 +00:00
Max Zwiessele	e0c68d5eb3	_highest_parent_ now follows the tree, dK_dX > gradient_X, added update_grads_variational to linear, bgplvm for new framework	2014-02-10 15:12:49 +00:00
James Hensman	375e2f6225	hard-merging in the examples and testing dirs from master. ... This is probably a dumb way to do it, but I don;t know better.	2014-01-24 09:41:07 +00:00
Max Zwiessele	a3bf662fd3	array handling in plotting and weave	2013-12-09 00:19:37 +00:00
Max Zwiessele	765ab41045	bgplvm integrated	2013-11-07 08:52:33 +00:00
Max Zwiessele	8c02e4af36	added BGPLVM in parameterized	2013-11-06 15:15:13 +00:00
Max Zwiessele	3316d29341	added gplbm and sparse gp to new parameterized structure	2013-11-06 11:40:54 +00:00
Max Zwiessele	6feb5dd2f1	adjusted parameters to report their changes	2013-11-03 13:58:15 +00:00
Max Zwiessele	d3721b76a8	changing all parameterized objects to be compatible with the new parameterization	2013-10-25 15:29:04 +01:00
Max Zwiessele	9c126d9b94	merged dimen reduction	2013-10-14 17:58:13 +01:00