Commit graph

530 commits

Author SHA1 Message Date
Nicolo Fusi
6a6cbb58c8 sometimes a step with missing data can be a bit unstable 2013-02-05 16:40:26 +00:00
Nicolas
642b1449e1 Small fixes to ploting 2013-02-05 14:23:51 +00:00
Nicolas
5b19d8609a Many modifications in GP plots to make it work 2013-02-05 12:27:12 +00:00
James Hensman
4dce1a428f tidying up after wide reaching changes: removed sparse_GP_old.py 2013-02-04 16:42:44 +00:00
James Hensman
bbc7bd8aca various merge conflicts from the newGP branch 2013-02-04 16:15:54 +00:00
James Hensman
687631f719 Merge branch 'newGP'
Conflicts:
	GPy/models/GP_regression.py
2013-02-04 12:41:22 +00:00
James Hensman
dacdaa1b41 simplified the checkgrad logic somewhat 2013-02-04 12:36:08 +00:00
James Hensman
9b69b04933 proper propagation of variance through the Gaussian likelihood 2013-02-04 12:18:14 +00:00
Ricardo Andrade
049e60f16b var[:,None] added in full_cov = false, sparse_GP 2013-02-04 12:01:27 +00:00
James Hensman
7a54660689 fixed bug in my schoolboy mathematics 2013-02-04 10:29:01 +00:00
James Hensman
3a61c39cb8 partial derivatives for the new likelihood framework 2013-02-04 10:22:01 +00:00
Nicolò Fusi
976b27b654 working on linear kernel 2013-02-03 15:00:53 +00:00
Ricardo Andrade
b1e5070ed0 Merge branch 'newGP' of github.com:SheffieldML/GPy into newGP 2013-02-01 17:58:59 +00:00
Ricardo Andrade
5e2baf1919 Changes in plotting functions. 2013-02-01 17:58:21 +00:00
James Hensman
2b756e96e1 made the BGPLVM work in the new world order 2013-02-01 17:42:51 +00:00
James Hensman
f7d2fc6ca4 Merge branch 'newGP' of github.com:SheffieldML/GPy into newGP 2013-02-01 17:13:10 +00:00
James Hensman
5447d6fbfc Assorted work on combining the EP and sparse methods 2013-02-01 17:12:45 +00:00
Ricardo Andrade
24b6dfa086 Classification examples corrected (2/3) 2013-02-01 16:21:26 +00:00
Ricardo Andrade
5593d53828 Merge branch 'newGP' of github.com:SheffieldML/GPy into newGP 2013-02-01 15:17:13 +00:00
Ricardo Andrade
0a8686d7c0 EPEM is running. 2013-02-01 15:14:11 +00:00
Nicolo Fusi
643abdcec7 made it clear that we are working with -f(x) 2013-02-01 14:53:48 +00:00
James Hensman
64280d7eb6 Merge branch 'newGP' of github.com:SheffieldML/GPy into newGP
Conflicts:
	GPy/likelihoods/EP.py
2013-02-01 13:56:28 +00:00
James Hensman
c025e8b68b beginning of work to make sparse GP ork with RA's EP methods 2013-02-01 13:55:19 +00:00
Ricardo Andrade
f941d629e6 James' debugging of the EP/GP interface
It seems that the GP-EP algorithm works now.
2013-02-01 13:45:55 +00:00
Ricardo Andrade
eb04cbed63 merged changes in likelihood_functions (James) 2013-02-01 13:32:13 +00:00
Ricardo Andrade
879fa138e1 Merge branch 'newGP' of github.com:SheffieldML/GPy into newGP
Conflicts:
	GPy/likelihoods/EP.py
	GPy/likelihoods/likelihood_functions.py
2013-02-01 13:19:59 +00:00
Ricardo Andrade
182c4c7d64 So many changes 2013-02-01 13:17:17 +00:00
Nicolas
d8785b534e Fixed bug in the product of kernels 2013-02-01 10:33:00 +00:00
James Hensman
346f9dd8bd added a likelihood atom class
and also some import tidying in the EP.py file
2013-02-01 10:05:22 +00:00
James Hensman
7dfbcebb87 some tidying in the likelihood classes 2013-02-01 09:47:30 +00:00
Nicolas
d8ca31121b Fixed small bug in m.plot() when samples are shown 2013-02-01 09:44:43 +00:00
Nicolas
6656393441 latex in doc is now beautiful 2013-01-31 18:01:32 +00:00
Nicolas
19eb6907c6 trying to fix doc 2 2013-01-31 17:57:56 +00:00
Nicolas
e995fb1f89 trying to fix doc 2013-01-31 17:52:19 +00:00
Nicolas
666f334a67 small fixes in the kernel documentation 2013-01-31 17:36:01 +00:00
Nicolas
160568c727 Merge branch 'master' of github.com:SheffieldML/GPy 2013-01-31 17:28:49 +00:00
Nicolo Fusi
8eb710a681 Merge branch 'master' of github.com:SheffieldML/GPy 2013-01-31 17:27:33 +00:00
Nicolo Fusi
b25e123113 changed default ARD setting in linear 2013-01-31 17:24:53 +00:00
Nicolas
a510524620 small changes in the way covariance functions handle lengthscale as input 2013-01-31 17:19:15 +00:00
Alan Saul
3a052cd5eb Reverted back to working docs 2013-01-31 16:13:27 +00:00
Alan Saul
36535286bf Insert to beginning of path 2013-01-31 16:10:04 +00:00
Alan Saul
a82605e6f9 Moved mock below extension loading 2013-01-31 16:08:22 +00:00
Alan Saul
dad399d012 Changed docs 2013-01-31 15:58:56 +00:00
Alan Saul
baa39a1c05 Changed to matplotlib sphinxext 2013-01-31 15:57:35 +00:00
Alan Saul
ea014e4b86 Added sphinxext package to ipython_directive 2013-01-31 15:55:11 +00:00
Alan Saul
507e5df9bc Still working? 2013-01-31 15:54:02 +00:00
Alan Saul
5f35f1553c Still working? 2013-01-31 15:52:56 +00:00
Alan Saul
87f7a8bd4f Checking before any extensions 2013-01-31 15:47:58 +00:00
Alan Saul
7f5200e4ba Added other ipython directive extension 2013-01-31 15:46:34 +00:00
Alan Saul
8c2adc1dce Trying ipython extension instead 2013-01-31 15:45:43 +00:00