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Reasoning: replace the mount-time auto-run of a deep_reference (which violated
the honest-empty "ask a question to trace" contract) with a passive real
memory-pool substrate. The stage is alive at rest (55% fill) without claiming a
trace; a real query swaps the pool for the actual evidence galaxy. Align the ask
placeholder with the specs.
Specs: the Reasoning Theater is zero-DOM (sr-only input, everything in-canvas) as
of the living-field conversion, but organ-reasoning + reasoning-flow still drove
a visible input and asserted DOM response panels (Primary Source / Cognitive
Pipeline / EvidenceCards) that no longer exist. Rewrite them to fill the sr-only
input by id, wait on the real /api/deep_reference 200, and assert the canvas
re-lights (fill + non-black + animates) — proving the flow on pixels + the API
round-trip. organ-explore asserted a dead /memories/{id} navigation; the row
click is an in-place semantic walk (?q= re-centers), so assert that instead.
All three reasoning specs + explore now pass against the real brain.
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
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