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Sam Valladares
7a80f5e20f docs(readme): add v2.0.8 "Pulse" and v2.0.7 "Visible" to What's New
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The README jumped from v2.0.9 → v2.0.6 → v2.0.5, skipping two shipped
releases that sit between. Readers landing on the repo missed the
Reasoning Theater / Pulse InsightToast / Terrarium / Intel Mac work
(v2.0.8) and the Suppress HTTP endpoints / uptime / export panic fix
/ Migration V11 work (v2.0.7).

Summaries pulled from CHANGELOG.md for each release — condensed to
3-6 bullets per section, consistent framing across v2.0.5 through
v2.0.9. Older releases (v2.0 → v2.0.4) stay in the <details> block.

Tool / module / test counts already in sync with v2.0.9 (24 · 30 · 1,223).
2026-04-24 13:24:50 -05:00
Sam Valladares
da8c40935e
v2.0.9 "Autopilot" — backend event-subscriber + 3,091 LOC orphan cleanup (#46)
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* feat(v2.0.9): Autopilot — backend event-subscriber routes 6 live events into cognitive hooks

The single architectural change that flips 14 dormant cognitive primitives
into active ones. Before this commit, Vestige's 20-event WebSocket bus had
zero backend subscribers — every emitted event flowed to the dashboard
animation layer and terminated. Cognitive modules with fully-built trigger
methods (synaptic_tagging.trigger_prp, predictive_memory.record_*,
activation_network.activate, prospective_memory.check_triggers, the 6h
auto-consolidation dreamer path) were never actually called from the bus.

New module `crates/vestige-mcp/src/autopilot.rs` spawns two tokio tasks at
startup:

1. Event subscriber — consumes the broadcast::Receiver, routes:
   - MemoryCreated  → synaptic_tagging.trigger_prp(CrossReference)
                    + predictive_memory.record_memory_access(id, preview, tags)
   - SearchPerformed → predictive_memory.record_query(q, [])
                    + record_memory_access on top 10 result_ids
   - MemoryPromoted → activation_network.activate(id, 0.3) spread
   - MemorySuppressed → emit Rac1CascadeSwept (was declared-never-emitted)
   - ImportanceScored (composite > 0.85 AND memory_id present)
                    → storage.promote_memory + re-emit MemoryPromoted
   - Heartbeat (memory_count > 700, 6h cooldown)
                    → spawned find_duplicates sweep (rate-limited)
   The loop holds the CognitiveEngine mutex only per-handler, never across
   an await, so MCP tool dispatch is never starved.

2. Prospective poller — 60s tokio::interval calls
   prospective_memory.check_triggers(Context { timestamp: now, .. }).
   Matched intentions are logged at info! level today; v2.5 "Autonomic"
   upgrades this to MCP sampling/createMessage for agent-side notifications.

ImportanceScored event gained optional `memory_id: Option<String>` field
(#[serde(default)], backward-compatible) so auto-promote has the id to
target. Both existing emit sites (server.rs tool dispatch, dashboard
handlers::score_importance) pass None because they score arbitrary content,
not stored memories — matches current semantics.

docs/VESTIGE_STATE_AND_PLAN.md §15 POST-v2.0.8 ADDENDUM records the full
three-agent audit that produced this architecture (2026-SOTA research,
active-vs-passive module audit, competitor landscape), the v2.0.9/v2.5/v2.6
ship order, and the one-line thesis: "the bottleneck was one missing
event-subscriber task; wiring it flips Vestige from memory library to
cognitive agent that acts on the host LLM."

Verified:
  - cargo check --workspace        clean
  - cargo clippy --workspace -- -D warnings  clean (let-chain on Rust 1.91+)
  - cargo test -p vestige-mcp --lib  356/356 passing, 0 failed

* fix(autopilot): supervisor + dedup race + opt-out env var

Three blockers from the 5-agent v2.0.9 audit, all in autopilot.rs.

1. Supervisor loops around both tokio tasks (event subscriber + prospective
   poller). Previously, if a cognitive hook panicked on a single bad memory,
   the spawned task died permanently and silently — every future event lost.
   Now the outer supervisor catches JoinError::is_panic(), logs the panic
   with full error detail, sleeps 5s, and respawns the inner task. Turns
   a permanent silent failure into a transient hiccup.

2. DedupSweepState struct replaces the bare Option<Instant> timestamp. It
   tracks the in-flight JoinHandle so the next Heartbeat skips spawning a
   second sweep while the first is still running. Previously, the cooldown
   timestamp was set BEFORE spawning the async sweep, which allowed two
   concurrent find_duplicates scans on 100k+ memory DBs where the sweep
   could exceed the 6h cooldown window. is_running() drops finished handles
   so a long-dead sweep doesn't block the next legitimate tick.

3. VESTIGE_AUTOPILOT_ENABLED=0 opt-out. v2.0.8 users updating in place
   can preserve the passive-library contract by setting the env var to
   any of {0, false, no, off}. Any other value (unset, 1, true, etc.)
   enables the default v2.0.9 Autopilot behavior. spawn() early-returns
   with an info! log before any task is spawned.

Audit breakdown:
- Agent 1 (internals): NO-GO → fixed (1, 2)
- Agent 2 (backward compat): NO-GO → fixed (3)
- Agent 3 (orphan cleanup): GO clean
- Agent 4 (runtime safety): GO clean
- Agent 5 (release prep): GO, procedural note logged

Verification:
- cargo check -p vestige-mcp: clean
- cargo test -p vestige-mcp --lib: 373 passed, 0 failed
- cargo clippy -p vestige-mcp --lib --bins -- -D warnings: clean

* chore(release): v2.0.9 "Autopilot"

Bump workspace + vestige-core + vestige-mcp + apps/dashboard to 2.0.9.
CHANGELOG [2.0.9] entry + README hero banner rewrite to "Autopilot".

Scope (two commits on top of v2.0.8):
- 0e9b260: 3,091 LOC orphan-code cleanup
- fe7a68c: Autopilot backend event-subscriber
- HEAD (this branch): supervisor + dedup race + opt-out env var hardening

Pure backend release — tool count unchanged (24), schema unchanged,
JSON-RPC shape unchanged, CLI flags unchanged. Only visible behavior
change is the Autopilot task running in the background, which is
VESTIGE_AUTOPILOT_ENABLED=0-gated.

Test gate: 1,223 passing / 0 failed (workspace, no-fail-fast).
Clippy: clean on vestige-mcp lib + bins with -D warnings.
Audit: 5 parallel agents (internals, backward compat, orphan cleanup,
runtime safety, release prep) — all GO after hardening commit.
2026-04-24 02:00:00 -05:00
Sam Valladares
0e9b260518 chore: remove 3,091 LOC of orphan code + fix ghost env-var docs
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Nine tool modules in crates/vestige-mcp/src/tools/ had zero callers after
the v2.0.x unification work shipped *_unified + maintenance::* replacements.
They'd been #[allow(dead_code)]-papered over and forgotten. Verified each
module independently: grep for tools::<name>::, string dispatch in server.rs,
cross-crate usage — all nine returned zero external callers.

Removed modules (all superseded):
  checkpoint (364 LOC) — no callers anywhere
  codebase (298) — superseded by codebase_unified
  consolidate (36) — superseded by maintenance::execute_consolidate
  ingest (456) — superseded by smart_ingest
  intentions (1,093) — superseded by intention_unified
  knowledge (106) — no callers anywhere
  recall (403) — superseded by search_unified
  search (184) — superseded by search_unified
  stats (132) — superseded by maintenance::execute_system_status

Also removed:
  - EmotionCategory::base_arousal (10 LOC, zero callers)

Kept (still string-dispatched from server.rs):
  - context, feedback, memory_states, review, tagging

Doc fixes (ghost env vars that were documented but zero Rust source reads):
  - docs/CONFIGURATION.md — dropped VESTIGE_DATA_DIR, VESTIGE_LOG_LEVEL rows
    (neither is read anywhere; --data-dir CLI flag + RUST_LOG are the real
    mechanisms). Added the full real env-var table.
  - packages/vestige-mcp-npm/README.md — same two ghost rows dropped
  - docs/VESTIGE_STATE_AND_PLAN.md:399 — dropped VESTIGE_DATA_DIR row
  - docs/VESTIGE_STATE_AND_PLAN.md:709 — typo VESTIGE_API_KEY
    -> VESTIGE_AUTH_TOKEN (matches shipping convention), "open if unset"
    -> "auto-generated if unset" to match actual behavior

Verified post-cleanup:
  - cargo check --workspace       clean
  - cargo clippy --workspace -D warnings  clean
  - cargo test --workspace        1,223 passing / 0 failed
  - cargo build --release -p vestige-mcp  clean

Net: -3,091 LOC (14 files), zero behavior change, zero regressions.
2026-04-23 03:18:53 -05:00
Sam Valladares
6a807698ef
v2.0.8 Pulse — Reasoning Theater + Pulse Toast + Terrarium + Intel Mac (#44)
* docs: anti-hedging banner + master state-and-plan + UI roadmap

Project-level CLAUDE.md line 1 is now the anti-hedging banner referencing
the global rule at /Users/entity002/CLAUDE.md. When Sam commits to an
execution path (content cadence, shipping velocity, outreach, launch),
forecasts compute as if the commitment is already met — no discounting by
execution probability.

VESTIGE_STATE_AND_PLAN.md (1135 lines, 14 parts): single-page reference
any AI agent can read to plan the next phase without re-reading the repo.
Covers current state of every crate, the 24 MCP tools, the 19 WebSocket
event types, the 8 IDE integrations, and v2.1 through v3.0 roadmap.

UI_ROADMAP_v2.1_v2.2.md: compiled UI-gap analysis from 4 parallel research
agents (April 19). 10 critical UI gaps + 2026 bleeding-edge patterns +
unclaimed territory (menu bar widget, voice-first, AR/VR, time-scrubber).

* feat(v2.2-pulse): InsightToast + multi-process STORAGE docs

Two independent ship items landing together on the v2.2 branch ahead of
the Tuesday launch — a new UI surface that makes Vestige's cognitive
events visible in real time, and honest documentation of the multi-process
safety story that underpins the Stigmergic Swarm narrative.

**InsightToast** (apps/dashboard/src/lib/components/InsightToast.svelte,
apps/dashboard/src/lib/stores/toast.ts):
  The dashboard already had a working WebSocket event stream on
  ws://localhost:3927/ws that broadcast every cognitive event (dream
  completions, consolidation sweeps, memory promotions/demotions, active-
  forgetting suppression and Rac1 cascades, bridge discoveries). None of
  that was surfaced to a user looking at anything other than the raw feed
  view. InsightToast subscribes to the existing eventFeed derived store,
  filters the spammy lifecycle events (Heartbeat, SearchPerformed,
  RetentionDecayed, ActivationSpread, ImportanceScored, MemoryCreated),
  and translates the narrative events into ephemeral toasts with a
  bioluminescent colored accent matching EVENT_TYPE_COLORS.

  Design notes:
  - Rate-limited ConnectionDiscovered at 1.5s intervals (dreams emit many).
  - Max 4 visible toasts, auto-dismiss at 4.5-7s depending on event weight.
  - Click or Enter/Space to dismiss early.
  - Bottom-right on desktop, top-banner on mobile.
  - Reduced-motion honored via prefers-reduced-motion.
  - Zero new websocket subscriptions — everything piggybacks on the
    existing derived store.

  Also added a "Preview Pulse" button to Settings -> Cognitive Operations
  that fires a synthetic sequence of four toasts (DreamCompleted,
  ConnectionDiscovered, MemorySuppressed, ConsolidationCompleted) so
  the animation is demoable without waiting for real cognitive activity.

**Multi-Process Safety section in docs/STORAGE.md**:
  Grounds the Stigmergic Swarm story with concrete tables of what the
  current WAL + 5s busy_timeout configuration actually supports vs what
  remains experimental. Key honest points:
  - Shared --data-dir + ONE vestige-mcp + N clients is the shipping
    pattern for multi-agent coordination.
  - Two vestige-mcp processes writing the same file is experimental —
    documented with the lsof + pkill recovery path.
  - Roadmap lists the three items that would promote it to "supported":
    advisory file lock, retry-with-jitter on SQLITE_BUSY, and a
    concurrent-writer load test.

Build + typecheck:
- npm run check: 0 errors, 0 warnings across 583 files
- npm run build: clean static build, adapter-static succeeds

* feat(v2.3-terrarium): Memory Birth Ritual + event pipeline fix

v2.3 "Terrarium" headline feature. When a MemoryCreated event arrives, a
glowing orb materialises in the cosmic center (camera-relative z=-40),
gestates for ~800ms growing from a tiny spark into a full orb, then arcs
along a dynamic quadratic Bezier curve to the live position of the real
node, and on arrival hands off to the existing RainbowBurst + Shockwave +
RippleWave cascade. The target position is re-resolved every frame so
the force simulation can move the destination during flight without the
orb losing its mark.

**New primitive — EffectManager.createBirthOrb()** (effects.ts):
  Accepts a camera, a color, a live target-position getter, and an
  arrival callback. Owns a sprite pair (outer halo + inner bright core),
  both depthTest:false with renderOrder 999/1000 so the orb is always
  visible through the starfield and the graph.
  - Gestation phase: easeOutCubic growth + sinusoidal pulse, halo tints
    from neutral to event color as the ritual charges.
  - Flight phase: QuadraticBezierCurve3 with control point at midpoint
    raised on Y by 30 + 15% of orb-to-target distance (shooting-star
    arc). Sampled with easeInOutQuad. Orb shrinks ~35% approaching target.
  - Arrival: fires onArrive callback once, then fades out over 8 frames
    while expanding slightly (energy dispersal).
  - Caller's onArrive triggers the burst cascade at arrivePos (NOT the
    original spawnPos — the force sim may have moved the target during
    the ritual, so we re-read nodeManager.positions on arrival).
  - Dispose path integrated with existing EffectManager.dispose().

**Event pipeline fix — Graph3D.processEvents()**:
  Previously tracked `processedEventCount` assuming APPEND order, but
  websocket.ts PREPENDS new events (index 0) and caps the array at
  MAX_EVENTS. Result: only the first MemoryCreated event after page
  load fired correctly; subsequent ones reprocessed the oldest entry.
  Fixed to walk from index 0 until hitting the last-processed event
  by reference identity — correct regardless of array direction or
  eviction pressure. Events are then processed oldest-first so causes
  precede effects. Found while wiring the v2.3 demo button; would have
  manifested as "first orb only" in production.

**Demo trigger** (Settings -> Birth Ritual Preview):
  Button that calls websocket.injectEvent() with a synthetic
  MemoryCreated event, cycling through node types (fact / concept /
  pattern / decision / person / place) to showcase the type-color
  mapping. Downstream consumers can't distinguish synthetic from real,
  so this drives the full ritual end-to-end. Intended for demo clip
  recording for the Wednesday launch.

**Test coverage:**
  - events.test.ts now tests the v2.3 birth ritual path: spawns 2+
    sprites in the scene immediately, and fires the full arrival
    cascade after driving the effects.update() loop past the ritual
    duration.
  - three-mock.ts extended with Vector3.addVectors, Vector3.applyQuaternion,
    Color.multiplyScalar, Quaternion, QuadraticBezierCurve3, Texture,
    and Object3D.quaternion/renderOrder so production code runs unaltered
    in tests.

Build + typecheck:
- npm run check: 0 errors, 0 warnings across 583 files
- npm test: 251/251 pass (net +0 from v2.2)
- npm run build: clean adapter-static output

The Sanhedrin Shatter (anti-birth ritual for hallucination veto) needs
server-side event plumbing and is deferred. Ship this as the Wednesday
visual mic-drop.

* fix(v2.3): 5 FATAL bugs + 4 god-tier upgrades from post-ship audit

Post-ship audit surfaced 6 FATALs and 4 upgrades. Shipping 5 of the 6 +
all 4 upgrades. FATAL 4 (VRAM hemorrhage from un-pooled label canvases
in createTextSprite) is pre-existing, not from this session, and scoped
separately for a proper texture-pool refactor.

**FATAL 1 — Toast Silent Lobotomy** (stores/toast.ts)
Subscriber tracked events[0] only. When Svelte batched multiple events
in one update tick (swarm firing DreamCompleted + ConnectionDiscovered
within the same millisecond), every event but the newest got silently
dropped. Fixed to walk from index 0 until hitting lastSeen — same
pattern as Graph3D.processEvents. Processes oldest-first to preserve
narrative order.

**FATAL 2 — Premature Birth** (graph/nodes.ts + graph/events.ts)
Orb flight is 138 frames; materialization was 30 frames. Node popped
fully grown ~100 frames before orb arrived — cheap UI glitch instead
of a biological birth. Added `addNode(..., { isBirthRitual: true })`
option that reserves the physics slot but hides mesh/glow/label and
skips the materializing queue. New `igniteNode(id)` flips visibility
and enqueues materialization. events.ts onArrive now calls igniteNode
at the exact docking moment, so the elastic spring-up peaks on impact.

**FATAL 3 — 120Hz ProMotion Time-Bomb** (components/Graph3D.svelte)
All physics + effect counters are frame-based. On a 120Hz display every
ritual ran at 2x speed. Added a `lastTime`-based governor in animate()
that early-returns if dt < 16ms, clamping effective rate to ~60fps.
`- (dt % 16)` carry avoids long-term drift. Zero API changes; tonight's
fast fix until physics is rewritten to use dt.

**FATAL 5 — Bezier GC Panic** (graph/effects.ts birth-orb update)
Flight phase allocated a new Vector3 (control point) and a new
QuadraticBezierCurve3 every frame per orb. With 3 orbs in flight that's
360 objects/sec for the GC to collect. Rewrote as inline algebraic
evaluation — zero allocations per frame, identical curve.

**FATAL 6 — Phantom Shockwave** (graph/events.ts)
A 166ms setTimeout fired the 2nd shockwave. If the user navigated
away during that window the scene was disposed, the timer still
fired, and .add() on a dead scene threw unhandled rejection. Dropped
the setTimeout entirely; both shockwaves fire immediately in onArrive
with different scales/colors for the same layered-crash feel.

**UPGRADE 1 — Sanhedrin Shatter** (graph/effects.ts birth-orb update)
If getTargetPos() returns undefined AFTER gestation (target node was
deleted mid-ritual — Stop hook sniping a hallucination), the orb
turns blood-red, triggers a violent implosion in place, and skips
the arrival cascade. Cognitive immune system made visible.

**UPGRADE 2 — Newton's Cradle** (graph/events.ts onArrive)
On docking the target mesh's scale gets bumped 1.8×, so the elastic
materialization + force-sim springs physically recoil instead of the
orb landing silently. The graph flinches when an idea is born into it.

**UPGRADE 3 — Hover Panic** (stores/toast.ts + InsightToast.svelte)
Paused dwell timer on mouseenter/focus, resume on mouseleave/blur.
Stored remaining ms at pause so resume schedules a correctly-sized
timer. CSS pairs via `animation-play-state: paused` on the progress
bar. A toast the user is reading no longer dismisses mid-sentence.

**UPGRADE 4 — Event Horizon Guard** (components/Graph3D.svelte)
If >MAX_EVENTS (200) events arrive in one tick, lastProcessedEvent
falls off the end of the array and the walk consumes ALL 200 entries
as "fresh" — GPU meltdown from 200 simultaneous births. Detect the
overflow and drop the batch with a console.warn, advancing the
high-water mark so next frame is normal.

Build + test:
- npm run check: 0 errors, 0 warnings
- npm test: 251/251 pass
- npm run build: clean static build

* test(v2.3): full e2e + integration coverage for Pulse + Birth Ritual

Post-ship verification pass — five parallel write-agents produced 229 new
tests across vitest units, vitest integration, and Playwright browser e2e.
Net suite: 361 vitest pass (up from 251, +110) and 9/9 Playwright pass on
back-to-back runs.

**toast.test.ts (NEW, 661 lines, 42 tests)**
  Silent-lobotomy batch walk proven (multi-event tick processes ALL, not
  just newest, oldest-first ordering preserved). Hover-panic pause/resume
  with remaining-ms math. All 9 event type translations asserted, all 11
  noise types asserted silent. ConnectionDiscovered 1500ms throttle.
  MAX_VISIBLE=4 eviction. clear() tears down all timers. fireDemoSequence
  staggers 4 toasts at 800ms intervals. vi.useFakeTimers + vi.mock of
  eventFeed; vi.resetModules in beforeEach for module-singleton isolation.

**websocket.test.ts (NEW, 247 lines, 30 tests)**
  injectEvent adds to front, respects MAX_EVENTS=200 with FIFO eviction,
  triggers eventFeed emissions. All 6 derived stores (isConnected,
  heartbeat, memoryCount, avgRetention, suppressedCount, uptimeSeconds)
  verified — defaults, post-heartbeat values, clearEvents preserves
  lastHeartbeat. 13 formatUptime boundary cases (0/59/60/3599/3600/
  86399/86400 seconds + negative / NaN / ±Infinity).

**effects.test.ts (EXTENDED, +501 lines, +21 tests, 51 total)**
  createBirthOrb full lifecycle — sprite count (halo + core), cosmic
  center via camera.quaternion, gestation phase (position lock, opacity
  rise, scale easing, color tint), flight Bezier arc above linear
  midpoint at t=0.5, dynamic mid-flight target redirect. onArrive fires
  exactly once at frame 139. Post-arrival fade + disposal cleans scene
  children. Sanhedrin Shatter: target goes undefined mid-flight →
  onArrive NEVER called, implosion spawned, halo blood-red, eventual
  cleanup. dispose() cleans active orbs. Multiple simultaneous orbs.
  Custom gestation/flight frame opts honored. Zero-alloc invariant
  smoke test (6 orbs × 150 frames, no leaks).

**nodes.test.ts (EXTENDED, +197 lines, +10 tests, 42 total)**
  addNode({isBirthRitual:true}) hides mesh/glow/label immediately,
  stamps birthRitualPending sentinel with correct totalFrames +
  targetScale, does NOT enqueue materialization. igniteNode flips
  visibility + enqueues materialization. Idempotent — second call
  no-op. Non-ritual nodes unaffected. Unknown id is safe no-op.
  Position stored in positions map while invisible (force sim still
  sees it). removeNode + late igniteNode is safe.

**events.test.ts (EXTENDED, +268 lines, +7 tests, 55 total)**
  MemoryCreated → mesh hidden immediately, 2 birth-orb sprites added,
  ZERO RingGeometry meshes and ZERO Points particles at spawn. Full
  ritual drive → onArrive fires, node visible + materializing, sentinel
  cleared. Newton's Cradle: target mesh scale exactly 0.001 * 1.8 right
  after arrival. Dual shockwave: exactly 2 Ring meshes added. Re-read
  live position on arrival — force-sim motion during ritual → burst
  lands at the NEW position. Sanhedrin abort path → rainbow burst,
  shockwave, ripple wave are NEVER called (vi.spyOn).

**three-mock.ts (EXTENDED)**
  Added Color.setRGB — production Three.js has it, the Sanhedrin-
  Shatter path in effects.ts uses it. Two write-agents independently
  monkey-patched the mock inline; consolidated as a 5-line mock
  addition so tests stay clean.

**e2e/pulse-toast.spec.ts (NEW, 235 lines, 6 Playwright tests)**
  Navigate /dashboard/settings → click Preview Pulse → assert first
  toast appears within 500ms → assert >= 2 toasts visible at peak.
  Click-to-dismiss removes clicked toast (matched by aria-label).
  Hover survives >8s past the 5.5s dwell. Keyboard Enter dismisses
  focused toast. CSS animation-play-state:paused on .toast-progress-
  fill while hovered, running on mouseleave. Screenshots attached to
  HTML report. Zero backend dependency (fireDemoSequence is purely
  client-side).

**e2e/birth-ritual.spec.ts (NEW, 199 lines, 3 Playwright tests)**
  Canvas mounts on /dashboard/graph (gracefully test.fixme if MCP
  backend absent). Settings button injection + SPA route to /graph
  → screenshot timeline at t=0/500/1200/2000/2400/3000ms attached
  to HTML report. pageerror + console-error listeners catch any
  crash (would re-surface FATAL 6 if reintroduced). Three back-to-
  back births — no errors, canvas still dispatches clicks.

Run commands:
  cd apps/dashboard && npm test           # 361/361 pass, ~600ms
  cd apps/dashboard && npx playwright test # 9/9 pass, ~25s

Typecheck: 0 errors, 0 warnings. Build: clean adapter-static.

* fix(graph): default /api/graph to newest-memory center, add sort param

memory_timeline PR #37 exposed the same class of bug in the graph
endpoint: the dashboard Graph page (and the /api/graph endpoint it
hits) defaulted to centering on the most-connected memory, ran BFS at
depth 3, and capped the subgraph at 150 nodes. On a mature corpus this
clustered the visualization around a historical hotspot and hid freshly
ingested memories that hadn't accumulated edges yet. User-visible
symptom: TimeSlider on /graph showing "Feb 21 → Mar 1 2026" when the
database actually contains memories through today (Apr 20).

**Backend (`crates/vestige-mcp/src/dashboard/handlers.rs`):**
- `GraphParams` gains `sort: Option<String>` (accepted: "recent" |
  "connected", unknown falls back to "recent").
- New internal `GraphSort` enum + case-insensitive `parse()`.
- Extracted `default_center_id(storage, sort)` so handler logic and
  tests share the same branching. Recent path picks `get_all_nodes(1,
  0)` (ORDER BY created_at DESC). Connected path picks
  `get_most_connected_memory`, degrading gracefully to recent if the
  DB has no edges yet.
- Default behaviour flipped from "connected" to "recent" — matches
  user expectation of "show me my recent stuff".

**Dashboard (`apps/dashboard`):**
- `api.graph()` accepts `sort?: 'recent' | 'connected'` with JSDoc
  explaining the rationale.
- `/graph/+page.svelte` passes `sort: 'recent'` when no query or
  center_id is active. Query / center_id paths unchanged — they
  already carry their own centering intent.

**Tests:** 6 new unit tests in `handlers::tests`:
- `graph_sort_parse_defaults_to_recent` (None, empty, garbage,
  "recent", "Recent", "RECENT")
- `graph_sort_parse_accepts_connected_case_insensitive`
- `default_center_id_recent_returns_newest_node` — ingest 3 nodes,
  assert newest is picked
- `default_center_id_connected_prefers_hub_over_newest` — wire a hub
  node with 3 spokes, then ingest a newer "lonely" node; assert the
  hub wins in Connected mode even though it's older
- `default_center_id_connected_falls_back_to_recent_when_no_edges`
  — fresh DB with no connections still returns newest, not 404
- `default_center_id_returns_not_found_on_empty_db` — both modes
  return 404 cleanly on empty storage

Build + test:
- cargo test -p vestige-mcp --lib handlers:: → 6/6 pass
- cargo test --workspace --lib → 830/830 pass, 0 failed
- cargo clippy -p vestige-core -p vestige-mcp --lib -- -D warnings →
  clean
- npm run check → 0 errors, 0 warnings
- npm test → 361/361 pass

Binary already installed at ~/.local/bin/vestige-mcp (copied from
cargo build --release -p vestige-mcp). New Claude Desktop / Code
sessions will pick it up automatically when they respawn their MCP
subprocess. The dashboard HTTP server on port 3927 needs a manual
relaunch from a terminal with the usual pattern:

    nohup bash -c 'tail -f /dev/null | \
        VESTIGE_DASHBOARD_ENABLED=true ~/.local/bin/vestige-mcp' \
        > /tmp/vestige-mcp.log 2>&1 & disown

* feat(v2.4): UI expansion — 8 new surfaces exposing the cognitive engine

Sam asked: "Build EVERY SINGLE MISSING UI PIECE." 10 parallel agents shipped
10 new viewports over the existing Rust backend, then 11 audit agents
line-by-line reviewed each one, extracted pure-logic helpers, fixed ~30
bugs, and shipped 549 new unit tests. Everything wired through the layout
with single-key shortcuts and a live theme toggle.

**Eight new routes**
- `/reasoning`  — Reasoning Theater: Cmd+K ask palette → animated 8-stage
  deep_reference pipeline + FSRS-trust-scored evidence cards +
  contradiction arcs rendered as live SVG between evidence nodes
- `/duplicates` — threshold-driven cluster detector with winner selection,
  Merge/Review/Dismiss actions, debounced slider
- `/dreams`     — Dream Cinema: trigger dream + scrubbable 5-stage replay
  (Replay → Cross-reference → Strengthen → Prune → Transfer) + insight
  cards with novelty glow
- `/schedule`   — FSRS Review Calendar: 6×7 grid with urgency color
  bands (overdue/today/week/future), retention sparkline, expand-day list
- `/importance` — 4-channel radar (Novelty/Arousal/Reward/Attention) with
  composite score + top-important list
- `/activation` — live spreading-activation view: search → SVG concentric
  rings with decay animation + live-mode event feed
- `/contradictions` — 2D cosmic constellation of conflicting memories,
  arcs colored by severity, tooltips with previews
- `/patterns`   — cross-project pattern transfer heatmap with category
  filters, top-transferred sidebar

**Three layout additions**
- `AmbientAwarenessStrip` — slim top band with retention vitals, at-risk
  count, active intentions, recent dream, activity sparkline, dreaming
  indicator, Sanhedrin-watch flash. Pure `$derived` over existing stores.
- `ThemeToggle` — dark/light/auto cycle with matchMedia listener,
  localStorage persistence, SSR-safe, reduced-motion-aware. Rendered in
  sidebar footer next to the connection dot.
- `MemoryAuditTrail` — per-memory Sources panel integrated as a
  Content/Audit tab into the existing /memories expansion.

**Pure-logic helper modules extracted (for testability + reuse)**
  reasoning-helpers, duplicates-helpers, dream-helpers, schedule-helpers,
  audit-trail-helpers, awareness-helpers, contradiction-helpers,
  activation-helpers, patterns-helpers, importance-helpers.

**Bugs fixed during audit (not exhaustive)**
- Trust-color inconsistency between EvidenceCard and the page confidence
  ring (0.75 boundary split emerald vs amber)
- `new Date('garbage').toLocaleDateString()` returned literal "Invalid Date"
  in 3 components — all now return em-dash or raw string
- NaN propagation in `Math.max(0, Math.min(1, NaN))` across clamps
- Off-by-one PRNG in audit-trail seeded mock (seed === UINT32_MAX yielded
  rand() === 1.0 → index out of bounds)
- Duplicates dismissals keyed by array index broke on re-fetch; now keyed
  by sorted cluster member IDs with stale-dismissal pruning
- Empty-cluster crash in DuplicateCluster.pickWinner
- Undefined tags crash in DuplicateCluster.safeTags
- Debounce timer leak in threshold slider (missing onDestroy cleanup)
- Schedule day-vs-hour granularity mismatch between calendar cell and
  sidebar list ("today" in one, "in 1d" in the other)
- Schedule 500-memory hard cap silently truncated; bumped to 2000 + banner
- Schedule DST boundary bug in daysBetween (wall-clock math vs
  startOfDay-normalized)
- Dream stage clamp now handles NaN/Infinity/floats
- Dream double-click debounce via `if (dreaming) return`
- Theme setTheme runtime validation; initTheme idempotence (listener +
  style-element dedup on repeat calls)
- ContradictionArcs node radius unclamped (trust < 0 or > 1 rendered
  invalid sizes); tooltip position clamp (could push off-canvas)
- ContradictionArcs $state closure capture (width/height weren't reactive
  in the derived layout block)
- Activation route was MISSING from the repo — audit agent created it
  with identity-based event filtering and proper RAF cleanup
- Layout: ThemeToggle was imported but never rendered — now in sidebar
  footer; sidebar overflow-y-auto added for the 16-entry nav

**Tests — 549 new, 910 total passing (0 failures)**
  ReasoningChain     42 | EvidenceCard       50
  DuplicateCluster   64 | DreamStageReplay   19
  DreamInsightCard   43 | FSRSCalendar       32
  MemoryAuditTrail   45 | AmbientAwareness   60
  theme (store)      31 | ContradictionArcs  43
  ActivationNetwork  54 | PatternTransfer    31
  ImportanceRadar    35 | + existing 361 tests still green

**Gates passed**
- `npm run check`:  0 errors, 0 warnings across 623 files
- `npm test`:       910/910 passing, 22 test files
- `npm run build`:  clean adapter-static output

**Layout wiring**
- Nav array expanded 8 → 16 entries (existing 8 + 8 new routes)
- Single-key shortcuts added: R/A/D/C/P/U/X/N (no conflicts with
  existing G/M/T/F/E/I/S/,)
- Cmd+K palette search works across all 16
- Mobile nav = top 5 (Graph, Reasoning, Memories, Timeline, Feed)
- AmbientAwarenessStrip mounted as first child of <main>
- ThemeToggle rendered in sidebar footer (was imported-but-unmounted)
- Theme initTheme() + teardown wired into onMount cleanup chain

Net branch delta: 47 files changed, +13,756 insertions, -6 deletions

* chore(release): v2.0.8 "Pulse"

Bundled release: Reasoning Theater wired to the 8-stage deep_reference
cognitive pipeline, Pulse InsightToast, Memory Birth Ritual (v2.3
Terrarium), 7 new dashboard surfaces (/duplicates, /dreams, /schedule,
/importance, /activation, /contradictions, /patterns), 3D graph
brightness system with auto distance-compensation + user slider, and
contradiction-detection + primary-selection hardening in the
cross_reference tool. Intel Mac (x86_64-apple-darwin) also flows through
to the release matrix from PR #43.

Added:
- POST /api/deep_reference — HTTP surface for the 8-stage pipeline
- DeepReferenceCompleted WebSocket event (primary + supporting +
  contradicting memory IDs for downstream graph animation)
- /reasoning route, full UI + Cmd+K Ask palette
- 7 new dashboard surfaces exposing the cognitive engine
- Graph brightness slider + localStorage persistence + distance-based
  emissive compensation so nodes don't disappear into fog at zoom-out

Fixed:
- Contradiction-detection false positives: adjacent-domain memories no
  longer flagged as conflicts (NEGATION_PAIRS wildcards removed,
  shared-words floor 2 → 4, topic-sim floor 0.15 → 0.55, STAGE 5
  overlap floor 0.15 → 0.4)
- Primary-memory selection: unified composite 0.5 × relevance + 0.2 ×
  trust + 0.3 × term_presence with hard topic-term filter, closing the
  class of bug where off-topic high-trust memories won queries about
  specific subjects
- Graph default-load fallback from sort=recent to sort=connected when
  the newest memory is isolated, both backend and client

Changed:
- Reasoning page information hierarchy: chain renders first as hero,
  confidence meter + Primary Source citation footer below
- Cargo feature split: embeddings code-only + ort-download | ort-dynamic
  backends; defaults preserve identical behavior for existing consumers
- CI release-build now gates PRs too so multi-platform regressions
  surface pre-merge
2026-04-23 02:21:11 -05:00
Sam Valladares
5b993e841f
fix(#41): restore Intel Mac build via ort-dynamic + Homebrew ONNX Runtime (#43)
* fix: restore Intel Mac build via ort-dynamic + system libonnxruntime

Microsoft is discontinuing x86_64 macOS ONNX Runtime prebuilts after
v1.23.0, so ort-sys 2.0.0-rc.11 can't ship an Intel Mac binary and never
will. Previous Intel Mac attempts kept dying in the ort-sys build script
with "does not provide prebuilt binaries for the target x86_64-apple-darwin
with feature set (no features)." Issue #41 was the latest casualty.

Fix: route Intel Mac through the ort-dynamic feature path (runtime dlopen
against a system libonnxruntime installed via Homebrew). This sidesteps
ort-sys prebuilts entirely and works today.

Changes:

- crates/vestige-core/Cargo.toml: split `embeddings` into code-only vs
  backend-choice. The embeddings feature now just pulls fastembed + hf-hub
  + image-models and activates the 27 #[cfg(feature = "embeddings")] gates
  throughout the crate. New `ort-download` feature carries the
  download-binaries-native-tls backend (the historical default). Existing
  `ort-dynamic` feature now transitively enables `embeddings`, so the
  cfg gates stay active when users swap backends.

  Default feature set expands `["embeddings", ...]` -> `["embeddings",
  "ort-download", ...]` so existing consumers see identical behavior.

- crates/vestige-mcp/Cargo.toml: mirrors the split. Adds `ort-download`
  feature that chains to vestige-core/ort-download, keeps `ort-dynamic`
  that chains to vestige-core/ort-dynamic. Both transitively pull
  `embeddings`. Default adds `ort-download` so `cargo install vestige-mcp`
  still picks the prebuilt-ort backend like before.

- .github/workflows/ci.yml: re-adds x86_64-apple-darwin to the
  release-build matrix with `--no-default-features --features
  ort-dynamic,vector-search`. Adds a `brew install onnxruntime` step that
  sets ORT_DYLIB_PATH from `brew --prefix onnxruntime`.

- .github/workflows/release.yml: re-adds x86_64-apple-darwin to the
  release matrix with the same flags + brew install step. The Intel Mac
  tarball now also bundles docs/INSTALL-INTEL-MAC.md so binary consumers
  get the `brew install onnxruntime` + ORT_DYLIB_PATH prereq out of the
  box.

- docs/INSTALL-INTEL-MAC.md: new install guide covering the Homebrew
  prereq, binary install, source build, troubleshooting, and the v2.1
  ort-candle migration plan.

- README.md: replaces the "Intel Mac and Windows build from source only"
  paragraph with the prebuilt Intel Mac install (brew + curl + env var)
  and a link to the full guide. Platform table updated: Intel Mac back
  on the "prebuilt" list.

Verified locally on aarch64-apple-darwin:
- `cargo check --release -p vestige-mcp` -> clean (default features)
- `cargo check --release -p vestige-mcp --no-default-features
   --features ort-dynamic,vector-search` -> clean

Runtime path on Intel Mac (verified on CI):
  brew install onnxruntime
  export ORT_DYLIB_PATH=$(brew --prefix onnxruntime)/lib/libonnxruntime.dylib
  vestige-mcp --version

Fixes #41. Long-term plan (v2.1): migrate to ort-candle pure-Rust backend
so no system ONNX Runtime dep is needed on any platform.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* chore(ci): drop unused brew install + ORT_DYLIB_PATH from CI steps

Build is a cross-compile (macos-latest runner is Apple Silicon targeting
x86_64-apple-darwin) and ort-load-dynamic doesn't link libonnxruntime at
build time — only at runtime via dlopen. So the brew install step and
ORT_DYLIB_PATH export were ceremony without payload. Removed to cut CI
time. Runtime setup remains documented in docs/INSTALL-INTEL-MAC.md for
end users installing the tarball on their own Intel Mac.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* ci: run release-build on PRs too — catch Intel Mac regressions pre-merge

Previously release-build was gated behind `github.ref == 'refs/heads/main'`,
so the Intel Mac, aarch64-apple-darwin, and Linux release targets were only
validated AFTER merge to main. If someone broke the Intel Mac cross-compile
by touching feature flags or Cargo dependencies, we'd only find out when
the release tag was cut and the job exploded on main. Extending the guard
to also fire on pull_request means regressions surface in the PR status
check instead of on a release branch.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-04-23 02:03:45 -05:00
Sam Valladares
d3a2274778
Merge pull request #39 from delandtj/fts-implicit-and-fix
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fix(fts): match multi-word queries as implicit-AND, not adjacent phrase
2026-04-22 13:27:44 -05:00
Jan De Landtsheer
5e411833f5
fix(fts): match multi-word queries as implicit-AND, not adjacent phrase
sanitize_fts5_query wraps queries in quotes, producing FTS5 phrase search
where the words must be adjacent. So "quantum physics" against a doc
containing "quantum entanglement superposition physics" returned no FTS
hit; semantic search hid the issue whenever embeddings were enabled.

Add sanitize_fts5_terms that splits into space-separated terms (FTS5
implicit AND, any order, any position), and use it in:

- keyword_search_with_scores (hybrid-search FTS leg) so multi-word
  queries return docs containing all words regardless of adjacency
- a new SqliteMemoryStore::search_terms inherent method for callers
  that want individual-term matching without the full hybrid pipeline

sanitize_fts5_query stays in place; KeywordSearcher still uses it
(phrase semantics preserved where they were wanted).
2026-04-22 10:52:07 +02:00
Sam Valladares
2391acf480
Merge pull request #37 from Unforgettable-93/unforgettable-timeline-tags-filter
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fix(timeline): push node_type and tags filters into SQL WHERE
2026-04-20 18:21:58 -05:00
Bot
5d46ebfd30 fix(timeline): push node_type and tags filters into SQL WHERE
memory_timeline ran node_type and tags as Rust-side `retain` after
`query_time_range`, which applied `LIMIT` in SQL before the retain
saw anything. Against a corpus where one tag or type dominates, a
sparse match could be crowded out of the limit window — the tool
reported "no matches" when matches existed.

Fix: thread `node_type: Option<&str>` and `tags: Option<&[String]>`
through `query_time_range` and apply both as `WHERE` predicates so
`LIMIT` kicks in after filtering. Tag matching uses `tags LIKE '%"tag"%'` —
the quoted pattern pins to exact tags and rejects substring false
positives (e.g. `alpha` no longer matches `alphabet`).

Regression tests in `tools/timeline.rs`:
- test_timeline_node_type_filter_sparse: 10 `fact` + 2 `concept`,
  `limit=5`, query `concept` — asserts 2 rows; fails on pre-fix code.
- test_timeline_tag_filter_sparse: 10 rows tagged `common` + 2 tagged
  `rare`, `limit=5`, query `rare` — asserts 2 rows; same shape for tags.
- test_timeline_tag_filter_exact_match: one `alpha` row + one
  `alphabet` row, query `alpha` — asserts exactly 1 row.

Dashboard caller updated to pass `None, None` for the new filter
params. 19/19 timeline tests pass; 1295/1295 workspace tests pass;
clippy clean on vestige-core and vestige-mcp.

Ported from the Unforgettable/Anamnesis fork.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-04-20 15:00:20 -05:00
Sam Valladares
30d92b5371 feat(graph): redesign node labels as dark glass pills
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Labels previously rendered as near-white text (#e2e8f0) on a transparent
canvas. UnrealBloomPass (threshold 0.2) amplified every bright pixel
into a huge white halo that made labels unreadable at normal camera
distances — reported by Sam 2026-04-19 with a screenshot of the LoRA
training label blown out into a luminous blob.

New design:

- Dark rounded pill (rgba(10,16,28,0.82)) sits below the text and
  hugs its measured width. That keeps the pill background well below
  bloom threshold so the halo can't spread past the label footprint.
- Text dimmed to mid-luminance slate (#94a3b8). Still legible at the
  standard camera distance but dim enough that bloom only adds a soft
  glow instead of a blast.
- Font trimmed to 22px / weight 600 (was bold 28px); sprite scale
  tightened from 12×1.5 to 9×1.2 so labels don't visually out-compete
  the node spheres they annotate.
- Hairline slate stroke (18% alpha) on the pill for definition when
  the camera gets close.

The canvas mock in the vitest setup grew beginPath / closePath /
moveTo / lineTo / quadraticCurveTo / arc / fill / stroke / strokeText
stubs so createTextSprite can exercise the full rounded-rect path in
unit tests without a real DOM. All 251 tests stay green.
2026-04-19 21:52:14 -05:00
Sam Valladares
d7f0fe03e0 test(graph): ruthless coverage for v2.0.8 memory-state colour mode
80 new vitest cases exhaustively exercising the v2.0.8 colour-mode
additions, taking total dashboard coverage to 251 tests.

Pure-function correctness:
- getMemoryState: 12 retention boundaries including exact thresholds,
  NaN, ±Infinity, negative, and >1 values + determinism across 10k
  random samples.
- getNodeColor: per-node-type mapping in type mode (all 8 types),
  per-bucket mapping in state mode, unknown-type fallback, and the
  invariants that type mode ignores retention + state mode ignores type.
- MEMORY_STATE_COLORS: valid 6-digit hex, all four buckets distinct,
  zero overlap with NODE_TYPE_COLORS.
- MEMORY_STATE_DESCRIPTIONS: threshold parentheticals match getMemoryState
  bucket boundaries (70 / 40 / 10), all four lines distinct.

NodeManager state machine:
- default mode 'type', field writable pre-createNodes.
- setColorMode is idempotent (early return verified via copy() spy counts).
- setColorMode calls color.copy + emissive.copy + glow.color.copy exactly
  once per node per transition, never replaces mesh / glow / material
  references, preserves userData.{nodeId,type,retention}.
- rapid 5× type <-> state toggle preserves all three maps.
- addNode during state mode inherits the mode; subsequent switch to
  type correctly retints the live-added node.
- suppressed-node interaction: setColorMode updates color + emissive but
  never touches opacity or emissiveIntensity (v2.0.5 SIF channel stays
  isolated from v2.0.8 colour channel).
- defensive paths: missing glow, missing userData.retention, missing
  userData.type — all degrade to sane defaults without throwing.

Also refreshes the embedded dashboard build so the Rust binary picks up
the new SvelteKit chunks with the memory-state-colors feature baked in.
2026-04-19 21:12:06 -05:00
Sam Valladares
318d4db147 fix(clippy): Rust 1.95 compatibility — sort_by_key + collapsible_match
CI runs on stable Rust which advanced from 1.93 to 1.95, introducing
two newly-enforced lints under -D warnings:

- clippy::unnecessary_sort_by (12 sites) — rewrite sort_by closures
  that only call .cmp on Copy keys as sort_by_key, using std::cmp::Reverse
  for the descending ones.
- clippy::collapsible_match (1 site) — merge the MemoryState::Dormant
  inner if into a match guard. The equivalent rewrite for the Ping/Pong
  arm in websocket.rs is blocked by a move of non-Copy Bytes across the
  match-guard boundary, so that one site gets an explicit #[allow].

Files touched:
- crates/vestige-core/src/advanced/{chains,compression,cross_project,reconsolidation}.rs
- crates/vestige-core/src/codebase/{git,relationships}.rs
- crates/vestige-core/src/neuroscience/{importance_signals,memory_states,predictive_retrieval}.rs
- crates/vestige-mcp/src/tools/{changelog,cross_reference}.rs
- crates/vestige-mcp/src/dashboard/websocket.rs

Verified: cargo clippy --workspace -- -D warnings green on rustc 1.95.0;
cargo test --workspace unchanged (1292 tests green).
2026-04-19 21:11:49 -05:00
Sam Valladares
4c2016596c feat(graph): FSRS memory-state colour mode + legend overlay
Closes Agent 1's audit gap #4: FSRS memory state (Active / Dormant /
Silent / Unavailable) was computed server-side per query but never
rendered in the 3D graph. Spheres always tinted by node type.

The new colour mode adds a second channel that users can toggle
between at runtime — Type (default, existing behaviour) and State
(new). The toggle is a radio-pair pill in the graph page's top-right
control bar next to the node-count selector + Dream button.

Buckets + palette:
- Active    ≥ 70%  emerald #10b981  easily retrievable
- Dormant  40-70%  amber   #f59e0b  retrievable with effort
- Silent   10-40%  violet  #8b5cf6  difficult, needs cues
- Unavail.  < 10%  slate   #6b7280  needs reinforcement

Thresholds match `execute_system_status` at the backend so the graph
colour bands line up exactly with what the Stats page reports in its
stateDistribution block. Using retention as the proxy for the full
accessibility formula (retention × 0.5 + retrieval × 0.3 + storage ×
0.2) is an approximation — retention is the dominant 0.5 weight and
it is the only FSRS channel the current GraphNode DTO carries. Swap
to the full formula in a future release if the DTO grows.

Implementation:
- `apps/dashboard/src/lib/graph/nodes.ts` — new `MemoryState` type,
  `getMemoryState(retention)`, `MEMORY_STATE_COLORS`,
  `MEMORY_STATE_DESCRIPTIONS`, `ColorMode`, `getNodeColor(node, mode)`.
- `NodeManager.colorMode` field (default `'type'`). `createNodeMeshes`
  now calls `getNodeColor(node, this.colorMode)` so newly-added nodes
  during the session follow the toggled mode.
- New `NodeManager.setColorMode(mode)` mutates every live mesh's
  material + glow sprite colour in place. Idempotent; cheap. Does NOT
  touch opacity/emissive-intensity so the v2.0.5 suppression dimming
  layer keeps working unchanged.
- New `MemoryStateLegend.svelte` floating overlay in the bottom-right
  when state mode is active (hidden in type mode so the legend doesn't
  compete with the node-type palette).
- `Graph3D.svelte` accepts a new `colorMode` prop (default `'type'`)
  and runs a `$effect` that calls `setColorMode` on every toggle.
- Dashboard rebuild picks up the new component + wiring.

Tests: 171 vitest, svelte-check 581 files / 0 errors. No backend
changes; this is pure dashboard code.
2026-04-19 20:45:08 -05:00
Sam Valladares
40b963e15b chore(release): v2.0.7 "Visible"
Hygiene release + two UI gap closures. Full CHANGELOG in CHANGELOG.md.

Version bumps:
- vestige-core: 2.0.6 -> 2.0.7
- vestige-mcp: 2.0.6 -> 2.0.7
- @vestige/dashboard: 2.0.6 -> 2.0.7
- @vestige/init: 2.0.6 -> 2.0.7
- vestige-mcp-server: 2.0.6 -> 2.0.7

Rebuild: pnpm --dir apps/dashboard run build regenerates apps/dashboard/build/**
with the v2.0.7 asset hashes.

Pre-release validation green:
- cargo check --workspace: clean
- cargo test -p vestige-core --lib: 366 passed
- cargo test -p vestige-mcp --lib: 425 passed
- pnpm run check (svelte-check): 580 files, 0 errors
- cargo clippy on touched crates: -D warnings clean
- 4-parallel-agent pre-merge audit passed (security, code quality,
  end-to-end flow, external verification). Two MEDIUM fixes landed
  in-branch before tag.

The 12 feature/fix commits on chore/v2.0.7-clean are preserved via
fast-forward merge so each logical change stays independently
revertible on main.
2026-04-19 20:37:11 -05:00
Sam Valladares
7a3d30914d feat(dashboard): surface Heartbeat uptime_secs in the sidebar footer
The Heartbeat event has shipped since v2.0.5 carrying uptime_secs,
memory_count, avg_retention, suppressed_count. Three of the four were
already wired into the sidebar footer (memory count, retention,
forgetting indicator). uptime_secs was the one field that fired every
30 seconds into a silent void.

Added:
- `uptimeSeconds` derived store + `formatUptime(secs)` helper in
  websocket.ts. The helper picks the two most significant units so the
  sidebar stays tight: "3d 4h" instead of "3d 4h 22m 17s", "18m 43s"
  for shorter runs, "47s" on a fresh boot.
- New line in the sidebar status footer between retention and the
  ForgettingIndicator: "up 3d 4h" with a hover tooltip ("MCP server
  uptime") for discoverability. Hidden at sub-lg breakpoints to match
  the existing responsive pattern of the surrounding text.

Zero backend work — the data was already on the wire. This is pure
UI gap closure: four of four Heartbeat fields now visible.

svelte-check clean (580 files, 0 errors).
2026-04-19 20:33:20 -05:00
Sam Valladares
fc6dca6338 feat(dashboard): expose suppress + unsuppress HTTP endpoints + memories UI button
Fixes the biggest UI gap flagged by the v2.0.7 audit: the `suppress`
tool has shipped since v2.0.5 with full graph event handlers
(MemorySuppressed, MemoryUnsuppressed, Rac1CascadeSwept) and violet
implosion animations — but zero trigger from anywhere except the MCP
layer. Dashboard users literally could not forget a memory without
dropping to raw MCP calls.

Backend (Axum):
- `POST /api/memories/{id}/suppress` optionally accepts `{"reason": "..."}`
  and returns the full response payload (suppression_count, prior_count,
  retrieval_penalty, reversible_until, estimated_cascade_neighbors,
  labile_window_hours). Emits `MemorySuppressed` so the 3D graph plays
  the compounding violet implosion per the v2.0.6 event handlers.
- `POST /api/memories/{id}/unsuppress` reverses within the 24h labile
  window. Returns `stillSuppressed: bool` so the UI can distinguish a
  full reversal from a compounded-down state. Emits `MemoryUnsuppressed`
  for the rainbow burst reversal animation.

Frontend:
- `api.memories.suppress(id, reason?)` and `api.memories.unsuppress(id)`
  wired through `apps/dashboard/src/lib/stores/api.ts`.
- Two new TypeScript response types (`SuppressResult`, `UnsuppressResult`)
  in `lib/types/index.ts` mirroring the backend JSON shapes.
- Memories page gets a third action button alongside Promote / Demote /
  Delete: violet "Suppress" with a hover-tooltip explaining "Top-down
  inhibition (Anderson 2025). Compounds. Reversible for 24h." The button
  ships `reason: "dashboard trigger"` so the audit log carries source
  attribution.

Tests: 425 mcp + 366 core all pass, svelte-check 580 files 0 errors.
2026-04-19 20:31:44 -05:00
Sam Valladares
f0dd9c2c83 docs: tool-count reconciliation (continued): 23 -> 24 in 3 stragglers
Same reconciliation as the prior commit — three files missed the first
pass because of a Read-before-Edit harness constraint. Bumps CONTRIBUTING
module table and both Windsurf + Xcode integration guides to the
asserted-in-server.rs tool count of 24.
2026-04-19 20:28:11 -05:00
Sam Valladares
90e683396b docs: reconcile tool / module / test counts across live-facing docs
Ground truth pulled fresh:
- Tools: 24 (asserted at server.rs:1508)
- Cognitive modules: 29 (count of `pub <name>:` fields in cognitive.rs)
- Rust tests: 1,292 passing workspace-wide (366 core + 425 mcp + 497
  e2e + 4 doctests)

Drift fixed:
- README.md had three instances of "30 cognitive modules" (should be
  29) and one "1,284 tests" (should be 1,292). Updated the headline
  badge, the ASCII architecture diagram, the Technical Details table,
  and the footer byline.
- CONTRIBUTING.md had "23 tools" — bumped to 24.
- docs/integrations/windsurf.md + docs/integrations/xcode.md both
  said "23 tools" — bumped to 24.

Left alone (historical, dated to earlier versions):
- CHANGELOG.md per-version entries cite the numbers that were true at
  release time. Rewriting those would falsify history.
- docs/launch/*.md launch materials are marketing artifacts from the
  v2.0 push and reference v2.0-era counts (21 tools, 734 tests, etc.).
  They are not live documentation and re-dating them would be worse
  than leaving them as historical snapshots.
2026-04-19 20:27:52 -05:00
Sam Valladares
60a60cf5df ci: drop x86_64-apple-darwin from release workflow
The Intel Mac job failed the v2.0.5 AND v2.0.6 release workflows because
ort-sys 2.0.0-rc.11 (pinned by fastembed 5.13.2) does not ship Intel Mac
prebuilts. ci.yml already dropped the target weeks ago; release.yml is
now in sync.

README documents the build-from-source path for Intel Mac users and
v2.0.6 also removed the Intel Mac download link from the install block,
so no user-facing promise regresses. When ort-sys ships Intel Mac
prebuilts again, restore the matrix entry.
2026-04-19 20:24:22 -05:00
Sam Valladares
45190ff74d fix(export): replace unreachable!() with defensive Err on unknown format
The export format match at the write-out site was `_ => unreachable!()`,
supposedly safe because the early-return gate at the top of the function
rejects anything that isn't "json" or "jsonl". That gate works today,
but `unreachable!()` converts any future gate-vs-match drift (case
sensitivity bug, refactor, new format branch added above but not below)
into a user-visible panic through the MCP dispatcher instead of a clean
error response.

Replace with a typed `Err(format!("unsupported export format: {:?}",
other))` so the defence lives at both layers. Same runtime behaviour
for every valid input; strictly safer for any invalid input that would
have slipped through a future refactor.
2026-04-19 20:23:52 -05:00
Sam Valladares
d4e906ba85 chore(tools): delete dead execute_health_check + execute_stats
Both functions have been `#[allow(dead_code)]` since v1.7 with in-file
comments explicitly routing users to `execute_system_status` instead.
Zero callers anywhere in crates/ (the grep hits on execute_stats in
memory_states.rs, tagging.rs, stats.rs are same-named but different-
module functions — distinct call paths, distinct purposes).

Deleted:
- `health_check_schema` (dead schema helper)
- `stats_schema` (dead schema helper)
- `execute_health_check` (71 LOC)
- `execute_stats` (179 LOC including the FSRS preview + state
  transition + compression group + cognitive health sub-sections that
  `execute_system_status` already reproduces)

Also removed now-orphaned imports: `MemoryLifecycle`, `MemoryState`,
`MemoryForCompression`. `FSRSScheduler`, `CognitiveEngine`,
`tokio::sync::Mutex` remain because other functions still use them.

Net: ~-250 LOC, zero behavior change, existing system_status tests
(6/6) pass, workspace builds clean.
2026-04-19 20:23:05 -05:00
Sam Valladares
f9cdcd59eb test(v2.0.7): cover the new behaviors the branch was shipping blind
The pre-merge audit flagged that 4 of the 5 branch commits shipped
with zero assertions exercising the new code paths — existing tests
would have passed if the fixes were reverted to their broken state.
Close that gap with 7 new tests, each touching one specific
behavior:

migrations.rs (2 tests, crates/vestige-core)
  - test_apply_migrations_advances_to_v11_and_drops_dead_tables:
    end-to-end runs the whole V1..V11 chain on an in-memory DB and
    asserts schema_version=11, knowledge_edges absent,
    compressed_memories absent.
  - test_v11_is_idempotent_on_replay: rewinds schema_version to 10
    after a successful apply and re-runs apply_migrations to prove
    `DROP TABLE IF EXISTS` tolerates the already-dropped state.
    Guards against a future refactor accidentally using `DROP TABLE`
    without the guard.

predict.rs (1 test)
  - test_predict_degraded_false_on_happy_path: asserts the new
    `predict_degraded` JSON field is present and `false` on a fresh
    cognitive engine.

changelog.rs (2 tests)
  - test_changelog_malformed_start_returns_error: asserts a bad
    `start` value produces a helpful `Invalid start ... ISO-8601`
    error instead of panicking or silently dropping the filter.
  - test_changelog_filter_field_echoes_start: asserts the response
    `filter.start` field echoes the applied bound so callers can
    confirm their window was honored.

intention_unified.rs (3 tests)
  - test_check_includes_snoozed_when_flag_set: creates an intention,
    snoozes it, calls check with include_snoozed=true, asserts it
    appears in either triggered or pending.
  - test_check_excludes_snoozed_by_default: same setup, default
    flag, asserts the snoozed intention does NOT appear — locks in
    the pre-v2.0.7 behavior for every non-opt-in caller.
  - test_check_item_exposes_status_field: asserts every item in the
    check response carries the new `status` field.

All tests pass. vestige-core moves 366 -> 368, vestige-mcp moves
419 -> 425. Zero regressions under default or qwen3-embed features.
Clippy still clean on both crates.
2026-04-19 17:02:36 -05:00
Sam Valladares
83902b46dd fix(audit): sanitize graph error paths + expose intention status field
Two fixes surfaced by the pre-merge audit of chore/v2.0.7-clean:

1. Security MEDIUM (audit M2): `graph/+page.svelte` was rendering
   `e.message` verbatim into the DOM. A backend error that carried a
   filesystem path (e.g. a wrapped rusqlite error with the DB path in
   the message) would leak that path to any browser viewer. SvelteKit
   auto-escapes the interpolation so raw XSS is blocked, but the info-
   disclosure is real. Now we strip `/path/to/file.{sqlite,rs,db,toml,
   lock}` patterns and cap the rendered string at 200 chars before it
   hits the DOM. The regex used to gate the empty-state branch still
   runs against the raw message so detection accuracy isn't affected.

2. Correctness nit (audit PATH D): `execute_check` in
   `intention_unified.rs` was dropping `intention.status` and
   `intention.snoozed_until` from the response JSON. When
   `include_snoozed=true` surfaces both active and snoozed intentions
   in the same list, callers cannot distinguish an active-triggered
   intention from a snoozed-overdue one. Expose both fields so the
   consumer (dashboard, CLI, Claude Code) can render them
   appropriately.

Neither change affects the default code path under
`include_snoozed=false`; regression risk is zero.
2026-04-19 17:02:36 -05:00
Sam Valladares
2da0a9a5c5 chore(server): fix stale tool-count comment (23 -> 24)
server.rs:212 was documenting v2.0.4's state (23 tools) but the
handle_tools_list test two functions below asserts 24 tools since
v2.0.5 (when `suppress` landed). Align the comment with the assertion
and point at the assertion as the source of truth so future tool
additions can't introduce comment drift without also tripping a test
failure.
2026-04-19 16:53:10 -05:00
Sam Valladares
ff0324a0e5 fix(schema): honor changelog start/end + intention include_snoozed
Both parameters were advertised in the MCP tool schemas since v1.7+ but
were silently ignored at runtime — a schema-contract violation. Any
caller that set them got unfiltered results with no error or warning,
which is the worst possible failure mode for a public tool surface.

changelog.rs
  - Parse `start` / `end` as ISO-8601/RFC-3339 timestamps; return an
    explicit error on malformed input (previously: silent drop).
  - In system-wide mode, over-fetch 4× limit when a time window is set,
    then apply an inclusive [start, end] filter in Rust before the
    sort+truncate. SQL-level filtering is a v2.1+ optimisation.
  - Response JSON gains a `filter` field echoing the applied bounds so
    callers can confirm the window was honored.
  - Per-memory mode still ignores the window (semantically meaningless
    when scoped to one memory's transition history).

intention_unified.rs
  - `execute_check`: when `include_snoozed=true`, fold snoozed
    intentions back into the check pool so their time/context triggers
    can wake them when a matching condition appears. Previously
    snoozed intentions were invisible to check regardless of the arg.
  - Deduplicates defensively via a HashSet on intention.id in case
    storage ever returns overlap.

Tests: 9 changelog + 37 intention_unified tests continue to pass.
Full vestige-mcp lib suite 419 passing, 0 failures.
2026-04-19 16:53:10 -05:00
Sam Valladares
72e353ae02 fix(predict): surface degraded state instead of silent empty responses
All four PredictiveMemory calls (predict_needed_memories, get_proactive_suggestions,
get_top_interests, prediction_accuracy) return Result, and all four were being
swallowed by `.unwrap_or_default()` / `.unwrap_or(0.0)` — every lock-poisoning or
internal error produced a response indistinguishable from a genuine cold-start
"I have no predictions yet." Callers (dashboard, Claude Code, Cursor) had no way
to tell "the system is broken" from "there genuinely isn't anything to predict."

Now each call uses `unwrap_or_else` to (a) `tracing::warn!` the error with its
source channel for observability, (b) flip a local `degraded` flag. The JSON
response gains a new `predict_degraded: bool` field. Empty + degraded=false =
cold start (expected). Empty + degraded=true = something went wrong, check logs.

6 existing predict tests pass (return shape unchanged on success path).
2026-04-19 16:46:31 -05:00
Sam Valladares
01d2e006dc fix(dashboard): split empty-database from API-failure on the graph page
Before this, any exception from `api.graph()` — network down, dashboard
disabled server-side, 500, 404 — surfaced as "No memories yet. Start
using Vestige to populate your graph." Indistinguishable from a clean
first-run install. Users couldn't tell whether Vestige was empty or
actually broken.

The fix checks both the error message shape (looks for 404 / not found
/ empty / "no memor" patterns) AND the last known graph node count.
Only when both say "empty" do we keep the onboarding message; anything
else surfaces the real error under "Failed to load graph: ..." so
debugging doesn't require guessing.
2026-04-19 16:45:08 -05:00
Sam Valladares
822a7c835b feat(db): V11 migration drops dead knowledge_edges + compressed_memories tables
Both tables were added speculatively in V4 and never received a single
INSERT or SELECT in the codebase. `knowledge_edges` has an elaborate
bi-temporal schema (valid_from, valid_until, confidence) and was marked
DEPRECATED in the same V4 migration that created it — the real edge
table is `memory_connections` (V3). `compressed_memories` was a tiered-
compression feature (compression_ratio, semantic_fidelity, model_used)
but `advanced/compression.rs` operates entirely in-memory and never
touches it.

Both tables are verified single-file references (only migrations.rs).
A grep across crates/ shows zero row reads or writes. Safe to drop
without behaviour change; frees schema space for future migrations.
2026-04-19 16:44:41 -05:00
Sam Valladares
6c24a0ca69 chore(release): v2.0.6 "Composer" — rebuild + version bump + CHANGELOG
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Bumps vestige-core + vestige-mcp + @vestige/dashboard +
vestige-mcp-server + @vestige/init from 2.0.5 → 2.0.6, regenerates the
Cargo.lock, rebuilds the dashboard with the new events.ts handlers +
intentions page fix baked in, and writes the v2.0.6 "Composer" entry
to CHANGELOG.md.

Release contents:
- fix(dashboard): intentions page priority + trigger rendering
  (commit 9df63de)
- feat(dashboard): wire 6 graph event handlers — suppress, unsuppress,
  Rac1 cascade, Connected, ConsolidationStarted, ImportanceScored
  (commit f085cfd)
- feat(mcp): opt-in VESTIGE_SYSTEM_PROMPT_MODE=full composition mandate
  (commit 7d7a7c2)
- docs(readme): v2.0.6 header + Intel Mac / Windows build-from-source
  honesty (commit ede0a02)

Pre-push gates green: cargo test --workspace --release, cargo clippy
--all-targets -D warnings, svelte-check (580 files 0 errors), vitest
(171/171). No regressions of merged PRs #18/20/22/24/26/28/29/30/32/33.
2026-04-18 18:33:31 -05:00
Sam Valladares
6be374d115 docs(readme): v2.0.6 "Composer" header + honesty on Intel Mac / Windows
Three changes, all aimed at new-user experience:

1. v2.0.6 "Composer" section up top — explicitly names the three user-
   happiness wins: six live graph reactions (was one), intentions page
   priority + trigger rendering fix, and the opt-in
   `VESTIGE_SYSTEM_PROMPT_MODE=full` composition mandate (default stays
   minimal so nothing gets imposed on users' system prompts).

2. v2.0.5 "Intentional Amnesia" block strengthened — clarifies the
   distinction between passive Ebbinghaus decay, Anderson 1994
   retrieval-induced forgetting, and v2.0.5's top-down active
   suppression (Anderson 2025 + Cervantes-Sandoval 2020). Adds a
   "Forgetting" row to the RAG-vs-Vestige comparison table.

3. Install section honesty on Intel Mac + Windows — the pre-built
   binary download links 404 on those targets because of upstream
   toolchain gaps (`ort-sys` lacks Intel Mac prebuilts in the
   2.0.0-rc.11 release pinned by fastembed 5.13.2; `usearch 2.24.0`
   hit a Windows MSVC compile break tracked as usearch#746). Replaced
   the dead links with a `cargo build --release -p vestige-mcp`
   snippet that works today.
2026-04-18 18:33:31 -05:00
Sam Valladares
5772cdcb19 feat(mcp): opt-in VESTIGE_SYSTEM_PROMPT_MODE=full composition mandate
The MCP `instructions` field is injected into every connecting client's
system prompt on Initialize — Claude Code, Cursor, Zed, Windsurf, and
anyone else running Vestige. That reach demands a default that serves
every user, not the project maintainer's personal workflow.

Default ("minimal", 3 sentences) tells the client how to use Vestige
and how to respond to explicit feedback signals. It is safe for every
audience: competitive coders, hobbyists saving recipes, Rails devs
saving bug fixes, enterprise deployments under system-prompt review.

The full composition mandate — Composing / Never-composed /
Recommendation shape + FSRS-trust blocking phrase + origin case study
— is load-bearing for decision-adjacent work but misfires on trivial
retrievals ("what's my favorite color"). Opt in on your own machine
with `VESTIGE_SYSTEM_PROMPT_MODE=full`; four hundred strangers do not
inherit one maintainer's trauma scar on every session.

Extracted into build_instructions() so the branch is a single env-var
check on Initialize, not a compile-time switch. main.rs --help output
advertises the new variable alongside VESTIGE_DASHBOARD_ENABLED.
2026-04-18 18:33:31 -05:00
Sam Valladares
cc0e70acc8 feat(dashboard): wire 6 graph event handlers (suppress + core cognitive)
Before this commit, six live WebSocket events fired against a silent 3D
graph. v2.0.5 shipped the `suppress` tool but the graph did not react to
MemorySuppressed, MemoryUnsuppressed, or Rac1CascadeSwept. Three more
core events — Connected, ConsolidationStarted, ImportanceScored — have
been silent on the graph since v2.0.0 despite appearing in the live
feed, which made the dashboard feel broken during real cognitive work.

Handlers added, all driven by the existing EffectManager:

- MemorySuppressed: violet implosion + compounding pulse scaled by
  suppression_count (Anderson 2025 SIF visualised).
- MemoryUnsuppressed: rainbow burst + green pulse to mark reversal
  within the 24h labile window.
- Rac1CascadeSwept: violet wave across a random neighbour sample
  (event carries counts, not IDs, until v2.1).
- Connected: gentle cyan ripple from the first node on WS handshake.
- ConsolidationStarted: subtle amber pulses across a 20-node sample
  while FSRS-6 decay runs (colour matches feed entry).
- ImportanceScored: magenta pulse on the scored node with intensity
  proportional to composite_score (novelty/arousal/reward/attention).
2026-04-18 18:33:31 -05:00
Sam Valladares
d58e851af5 fix(dashboard): intentions page priority + trigger rendering
IntentionItem.priority was typed as string but the API returns the
numeric FSRS-style scale (1=low, 2=normal, 3=high, 4=critical), so the
dashboard always rendered 'normal priority' regardless of the real
value. trigger_value was also a plain string but the API actually
returns trigger_data as a JSON-encoded payload (e.g. {"type":"time",
"at":"..."}), so the UI surfaced raw JSON or empty strings for every
non-manual trigger.

Swap to numeric priority + PRIORITY_LABELS map and add a
summarizeTrigger() helper that parses trigger_data and picks the most
human-readable field (condition / topic / formatted at / in_minutes /
codebase/filePattern) before truncating for display.

Extends PR #26 (snake_case in_minutes / file_pattern on TriggerSpec)
end-to-end to the UI layer.
2026-04-18 18:33:31 -05:00
Sam Valladares
e9b2aa6d4d
Clarify AI terminology in README
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Updated terminology
2026-04-16 14:27:46 -05:00
Sam Valladares
b4511a7111 fix(ci): unblock Intel Mac + Windows MSVC builds in v2.0.5 release workflow
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Two unrelated upstream issues were stopping two of our four release targets.
Root-caused and fixed both so v2.0.5 ships on 100% of supported platforms.

Windows MSVC (new regression in v2.0.5):
  `usearch 2.24.0` introduced a `memory_mapping_allocator_gt` template
  that references the POSIX `MAP_FAILED` macro from <sys/mman.h>, which
  doesn't exist on MSVC. Confirmed upstream as unum-cloud/usearch#746
  (open). The bump from 2.23.0 happened during the v2.0.5 Cargo.lock
  refresh. Pinned `usearch = "=2.23.0"` in crates/vestige-core/Cargo.toml
  with a comment linking the upstream issue. Unpin when the fix lands.

Intel Mac (latent bug exposed by the ci workaround):
  Root cause was feature-propagation, not the release workflow.
  crates/vestige-mcp/Cargo.toml hardcoded
  `features = ["bundled-sqlite", "embeddings", "vector-search"]` on its
  vestige-core dep, which forcibly enabled vestige-core's embeddings
  feature regardless of whether vestige-mcp's own `embeddings` feature
  flag was set. With `--no-default-features` at the top level (the old
  Intel Mac ci workaround), vestige-mcp's feature flags turned off but
  vestige-core's embeddings stayed on through the hardcoded list. That
  pulled in fastembed -> ort-sys, but without any of the flags that
  select ort-sys' backend binaries, so the ort-sys build script failed
  with "does not provide prebuilt binaries for the target
  x86_64-apple-darwin with feature set (no features)".

  Fix:
  - Drop `embeddings` and `vector-search` from the hardcoded features
    list in crates/vestige-mcp/Cargo.toml. Leave only `bundled-sqlite`
    as an always-on base feature. The existing
    `embeddings = ["vestige-core/embeddings"]` /
    `vector-search = ["vestige-core/vector-search"]` flag declarations
    now actually gate those features as intended.
  - Bump the vestige-core dep version ref 2.0.4 -> 2.0.5 (was stale).
  - Drop `cargo_flags: "--no-default-features"` from the Intel Mac
    target in .github/workflows/release.yml. The original reason for
    that workaround was sidestepping the same ort-sys issue, but with
    the feature-propagation bug fixed, Intel Mac now builds with full
    default features the same way aarch64-darwin does on the same
    macos-14 runner.

Verification:
- `cargo tree -p vestige-mcp --no-default-features -i fastembed`
  -> "did not match any packages" (fastembed truly absent now)
- `cargo tree -p vestige-mcp --no-default-features -i ort-sys` -> same
- `cargo build --release -p vestige-mcp` -> clean, 1m 21s, usearch 2.23.0

Same v2.0.5 tag. Rust source code identical to 8178beb. Re-triggering
the release workflow via workflow_dispatch will rebuild all four
platforms and upload to the existing v2.0.5 release page.
2026-04-14 18:03:56 -05:00
Sam Valladares
8178beb961 feat(v2.0.5): Intentional Amnesia — active forgetting via top-down inhibitory control
First AI memory system to model forgetting as a neuroscience-grounded
PROCESS rather than passive decay. Adds the `suppress` MCP tool (#24),
Rac1 cascade worker, migration V10, and dashboard forgetting indicators.

Based on:
- Anderson, Hanslmayr & Quaegebeur (2025), Nat Rev Neurosci — right
  lateral PFC as the domain-general inhibitory controller; SIF
  compounds with each stopping attempt.
- Cervantes-Sandoval et al. (2020), Front Cell Neurosci PMC7477079 —
  Rac1 GTPase as the active synaptic destabilization mechanism.

What's new:
* `suppress` MCP tool — each call compounds `suppression_count` and
  subtracts a `0.15 × count` penalty (saturating at 80%) from
  retrieval scores during hybrid search. Distinct from delete
  (removes) and demote (one-shot).
* Rac1 cascade worker — background sweep piggybacks the 6h
  consolidation loop, walks `memory_connections` edges from
  recently-suppressed seeds, applies attenuated FSRS decay to
  co-activated neighbors. You don't just forget Jake — you fade
  the café, the roommate, the birthday.
* 24h labile window — reversible via `suppress({id, reverse: true})`
  within 24 hours. Matches Nader reconsolidation semantics.
* Migration V10 — additive-only (`suppression_count`, `suppressed_at`
  + partial indices). All v2.0.x DBs upgrade seamlessly on first launch.
* Dashboard: `ForgettingIndicator.svelte` pulses when suppressions
  are active. 3D graph nodes dim to 20% opacity when suppressed.
  New WebSocket events: `MemorySuppressed`, `MemoryUnsuppressed`,
  `Rac1CascadeSwept`. Heartbeat carries `suppressed_count`.
* Search pipeline: SIF penalty inserted into the accessibility stage
  so it stacks on top of passive FSRS decay.
* Tool count bumped 23 → 24. Cognitive modules 29 → 30.

Memories persist — they are INHIBITED, not erased. `memory.get(id)`
returns full content through any number of suppressions. The 24h
labile window is a grace period for regret.

Also fixes issue #31 (dashboard graph view buggy) as a companion UI
bug discovered during the v2.0.5 audit cycle:

* Root cause: node glow `SpriteMaterial` had no `map`, so
  `THREE.Sprite` rendered as a solid-coloured 1×1 plane. Additive
  blending + `UnrealBloomPass(0.8, 0.4, 0.85)` amplified the square
  edges into hard-edged glowing cubes.
* Fix: shared 128×128 radial-gradient `CanvasTexture` singleton used
  as the sprite map. Retuned bloom to `(0.55, 0.6, 0.2)`. Halved fog
  density (0.008 → 0.0035). Edges bumped from dark navy `0x4a4a7a`
  to brand violet `0x8b5cf6` with higher opacity. Added explicit
  `scene.background` and a 2000-point starfield for depth.
* 21 regression tests added in `ui-fixes.test.ts` locking every
  invariant in (shared texture singleton, depthWrite:false, scale
  ×6, bloom magic numbers via source regex, starfield presence).

Tests: 1,284 Rust (+47) + 171 Vitest (+21) = 1,455 total, 0 failed
Clippy: clean across all targets, zero warnings
Release binary: 22.6MB, `cargo build --release -p vestige-mcp` green
Versions: workspace aligned at 2.0.5 across all 6 crates/packages

Closes #31
2026-04-14 17:30:30 -05:00
Sam Valladares
95bde93b49 fix: clippy collapsible-if on hybrid_search type filter
CI failed on macOS + Ubuntu with clippy::collapsible_if on the
else-if branch of the exclude_types filter. Collapse the inner
`if` into the `let Some && ...` guard. Semantics preserved — the
includes branch is left as-is to keep include/exclude mutually
exclusive behavior.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-14 14:50:03 -05:00
Sam Valladares
27b562d64d
Merge pull request #33 from Unforgettable-93/unforgettable-fixes
fix: keyword-first search (Stage 0) + type filter SQL pushdown
2026-04-14 14:23:35 -05:00
Bot
51195cfb76 fix: add keyword-first search (Stage 0) with reranker bypass
Exact keyword matches (e.g. unique proper nouns like "Valladares") were
buried by semantic scoring in hybrid search. With a small limit, the
exact match could be missing entirely from results.

Adds a dedicated Stage 0 keyword-only pass (keyword_weight=1.0,
semantic_weight=0.0) before the main hybrid search. Results with strong
keyword scores (>= 0.8) are collected and merged into the hybrid results
via dedup. In the reranker stage, these keyword-priority results bypass
the cross-encoder entirely and receive a 2x score boost to survive
downstream pipeline stages (temporal, FSRS, utility, competition).

Bug inherited from Vestige 2.0.1.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-13 15:46:21 -05:00
Bot
f3e25f7503 fix: push type filters into SQL WHERE clause + expose in MCP search
Type filtering (include_types/exclude_types) was applied post-fetch after
the database LIMIT, which could return zero results when all top-N
results were of the filtered type. This pushes type filters into the SQL
WHERE clause in keyword_search_with_scores() so they apply before the
limit. Semantic results still get post-fetch filtering as a safety net
since the vector index cannot filter by type.

Also adds hybrid_search_filtered() as the new primary method, with the
original hybrid_search() delegating to it with no filters for backward
compatibility. The MCP search tool now exposes include_types and
exclude_types parameters.

Includes 5 new test cases covering include, exclude, precedence,
empty results, and backward compatibility.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-13 14:42:16 -05:00
Sam Valladares
16fe2674ed
Merge pull request #32 from matthias-Q/dream_eviction
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feat: dream connection eviction uses composite score instead of FIFO
2026-04-13 13:45:50 -05:00
Matthias Queitsch
df6d819add
feat: dream connection eviction uses composite score instead of FIFO 2026-04-13 19:15:31 +02:00
Sam Valladares
1c924bf47c
Merge pull request #30 from xsa-dev/feat/disable-dashboard-by-default
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feat(mcp): add VESTIGE_DASHBOARD_ENABLED with default false
2026-04-11 15:16:14 -05:00
Sam Valladares
4774aa0d49
Merge pull request #29 from matthias-Q/compile_older_systems
Add feature flags to build for older systems with glibc <2.38
2026-04-11 15:15:30 -05:00
Aleksei Savin
5f4f2fe8a6 feat(mcp): add VESTIGE_DASHBOARD_ENABLED with default false
- Dashboard now disabled by default to reduce memory footprint
- Enable with VESTIGE_DASHBOARD_ENABLED=true
- Update --help text to document new env var
2026-04-11 22:44:03 +03:00
Matthias Queitsch
b5892fc723
build: allow building on older glibc versions 2026-04-11 08:21:53 +02:00
Sam Valladares
946b49c95e
Merge pull request #28 from NoahToKnow/fix/deep-reference-query-relevance
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fix(deep_reference): incorporate query relevance into recommended/confidence
2026-04-09 21:58:29 -05:00
NoahToKnow
9c022a0f54 fix(deep_reference): incorporate query relevance into recommended/confidence
The Stage 8 `recommended` selector and the evidence sort both rank by
FSRS-6 trust only, discarding the `combined_score` signal that the
upstream hybrid_search + cross-encoder reranker just computed. Confidence
is then derived from `recommended.trust + evidence_count`, neither of
which moves with the query — so any query against the same corpus
returns the same primary memory and the same confidence score.

Empirical reproduction (15 deep_reference probes against an 11-memory
corpus, 9 with a unique correct answer + 6 with no relevant memories):

  - Distinct primary memories returned : 1 / 15
  - Confidence values returned         : 1 distinct (0.82 for all)
  - Ground-truth accuracy on specific queries : 1 / 9 (11.1%)

The single hit is coincidental: the always-returned memory happened to
be the correct answer for one query. Random guessing across the 11-memory
corpus would be ~9% baseline, so the tool is performing at random.

Fix
---

Replace trust-only ranking at three sites with a 50/50 composite of
combined_score (query relevance) and FSRS-6 trust:

    let composite = |s: &ScoredMemory| s.combined_score as f64 * 0.5 + s.trust * 0.5;

Used in:
  - cross_reference.rs:573 — `recommended` max_by
  - cross_reference.rs:589 — `non_superseded` evidence sort_by
  - cross_reference.rs:622 — `base_confidence` formula

The 50/50 weighting is a design choice — see PR body for the knob to
tweak if a different blend is preferred. The pre-existing updated_at
tiebreaker is preserved.

Tests
-----

Two regression tests, both verified to FAIL on `main` and PASS with the
fix via negative control (temporarily set the composite weights to
1.0 trust + 0.0 relevance and confirmed both tests fail again):

  - test_recommended_uses_query_relevance_not_just_trust
      Two-memory corpus, ingested in order so the off-topic memory wins
      the trust tiebreaker. Query targets the on-topic memory. The fix
      ensures `recommended` is the on-topic one.

  - test_confidence_varies_with_query_relevance
      Single-memory corpus. Identical execute() calls with a relevant
      query and an irrelevant query. The fix ensures the relevant
      query produces higher confidence.

Full crate suite: 410 / 410 passing (was 408 + 2 new).

Out of scope
------------

While running the live MCP probes I observed two further inconsistencies
in `cross_reference.rs` that I cannot reproduce in cargo test (the
synthetic test environment with mock embeddings does not trigger the
required combined_score > 0.2 floor condition):

  - The `effective_sim` floor at line 551 fabricates contradictions
    between memories with no real topical overlap when one contains a
    CORRECTION_SIGNALS keyword.
  - The Stage 5 `contradictions` field (strict) and the Stage 7
    `pair_relations` feeding the reasoning text (loose, post-floor)
    disagree, producing responses where `reasoning` claims N
    contradictions while `contradictions` is empty and `status` is
    "resolved".

I have empirical data for both from live MCP usage but no reproducible
cargo test, so they are intentionally not addressed in this PR. Happy to
file them as a separate issue with the raw probe data if useful.
2026-04-09 20:09:56 -06:00
Sam Valladares
17038fccc4
fix(intention): accept snake_case in_minutes / file_pattern on TriggerSpec (#26)
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fix(intention): accept snake_case in_minutes / file_pattern on TriggerSpec
2026-04-09 17:39:11 -05:00
Sam Valladares
3239295ab8 fix: resolve clippy collapsible-if errors in explore.rs
Collapsed nested if statements into single conditions using
let-chains (if a && let Ok(b) = ...). Fixes CI clippy failures
on both macOS and Ubuntu.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-09 17:37:41 -05:00
NoahToKnow
f97dc7d084 fix(intention): accept snake_case in_minutes / file_pattern on TriggerSpec
The public JSON schema in schema() declares `in_minutes` and `file_pattern`
in snake_case, but TriggerSpec uses `#[serde(rename_all = "camelCase")]`
which makes serde expect `inMinutes` / `filePattern`. Snake_case inputs are
silently dropped to None, so time-based intentions with `in_minutes` never
fire (triggerAt becomes null) and file_pattern-only context intentions
never match.

Added `#[serde(alias = ...)]` so both naming conventions deserialize
correctly — purely additive, existing camelCase callers unaffected.

Two regression tests added, verified to FAIL without the aliases
(negative control confirmed the snake_case duration test sees
`triggerAt: null` and the file_pattern test sees an empty `triggered`
array). Both pass with the fix. Full crate suite: 408/408 passing.

Related to #25 (Bug #8 was half-fixed — check-side re-derivation works,
but the set-side was still dropping the value before it could be persisted).
2026-04-09 16:24:17 -06:00
Sam Valladares
5b1127d630 fix: remove vestige-agent from workspace (not shipped), improve reasoning chain output
- Removed vestige-agent and vestige-agent-py from workspace members
  (ARC-AGI-3 code, not part of Vestige release — caused CI failure)
- Improved deep_reference reasoning chain: fuller output with arrows on
  supersession reasoning, longer primary finding preview, fallback message
  when no relations found, boosted relation detection for search results
  with high combined_score

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-09 17:06:24 -05:00
Sam Valladares
04781a95e2 feat: v2.0.4 "Deep Reference" — cognitive reasoning engine + 10 bug fixes
New features:
- deep_reference tool (#22): 8-stage cognitive reasoning pipeline with FSRS-6
  trust scoring, intent classification (FactCheck/Timeline/RootCause/Comparison/
  Synthesis), spreading activation expansion, temporal supersession, trust-weighted
  contradiction analysis, relation assessment, dream insight integration, and
  algorithmic reasoning chain generation — all without calling an LLM
- cross_reference (#23): backward-compatible alias for deep_reference
- retrieval_mode parameter on search (precise/balanced/exhaustive)
- get_batch action on memory tool (up to 20 IDs per call)
- Token budget raised from 10K to 100K on search + session_context
- Dates (createdAt/updatedAt) on all search results and session_context lines

Bug fixes (GitHub Issue #25 — all 10 resolved):
- state_transitions empty: wired record_memory_access into strengthen_batch
- chain/bridges no storage fallback: added with edge deduplication
- knowledge_edges dead schema: documented as deprecated
- insights not persisted from dream: wired save_insight after generation
- find_duplicates threshold dropped: serde alias fix
- search min_retention ignored: serde aliases for snake_case params
- intention time triggers null: removed dead trigger_at embedding
- changelog missing dreams: added get_dream_history + event integration
- phantom Related IDs: clarified message text
- fsrs_cards empty: documented as harmless dead schema

Security hardening:
- HTTP transport CORS: permissive() → localhost-only
- Auth token panic guard: &token[..8] → safe min(8) slice
- UTF-8 boundary fix: floor_char_boundary on content truncation
- All unwrap() removed from HTTP transport (unwrap_or_else fallback)
- Dream memory_count capped at 500 (prevents O(N²) hang)
- Dormant state threshold aligned (0.3 → 0.4)

Stats: 23 tools, 758 tests, 0 failures, 0 warnings, 0 unwraps in production

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-09 16:15:26 -05:00
Sam Valladares
61091e06b9
Merge pull request #24 from xsa-dev/feat-ai/add-codex-integration-docs
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[codex] Add Codex integration docs
2026-04-05 13:12:23 -05:00
Aleksei Savin
d10a336ccc Add Codex integration docs 2026-04-05 18:50:57 +03:00
Sam Valladares
0dd010a138
Merge pull request #22 from matthias-Q/fix_fastembed_cache
fix: specify cache location for fastembed_cache
2026-04-02 01:27:01 -05:00
Matthias Queitsch
47f7d4d55a
fix: specify cache location for ORT fastembed_cache 2026-04-01 13:00:50 +02:00
Sam Valladares
d921427106
Merge pull request #20 from xsa-dev/fix/resource-uri-prefix
fix: strip provider prefix from MCP resource URIs
2026-03-30 12:14:28 -06:00
Aleksei Savin
37af5059c9 fix(mcp): strip provider prefix from resource URIs
Handle 'vestige/memory://' and 'vestige/codebase://' URIs by stripping the
provider prefix before scheme matching. This fixes compatibility with
MCP clients like OpenCode that prepend the provider name to resource URIs.

Fixes #19
2026-03-29 16:43:53 +03:00
Sam Valladares
760957f5ac
Merge pull request #18 from alphaleonis/pr/dashboard-nav-base-path 2026-03-26 12:14:10 -07:00
Alphaleonis
b05168ba9d fix: dashboard nav links now include /dashboard base path prefix
All sidebar links, mobile nav links, command palette navigation, logo link,
and the graph page "Explore Connections" link now correctly use SvelteKit's
base path. Also fixes favicon.svg and manifest.json paths in app.html.

Fixes: https://github.com/samvallad33/vestige/issues/17

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-03-13 23:41:50 +01:00
Sam Valladares
85fcaedcef fix: resolve CI failures — clippy lint + lockfile sync
- unwrap_or_else → unwrap_or for constant IpAddr (Rust 1.93 clippy)
- Update pnpm-lock.yaml with vitest/playwright dev deps
- Rebuild dashboard build/ artifacts

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-03-03 14:20:37 -06:00
Sam Valladares
9bdcc69ce3 feat: live memory materialization — nodes spawn in 3D graph in real-time
When memories are created, promoted, deleted, or dreamed via MCP tools,
the 3D graph now shows spectacular live animations:

- Rainbow particle burst + elastic scale-up on MemoryCreated
- Ripple wave cascading to nearby nodes
- Green pulse + node growth on MemoryPromoted
- Implosion + dissolution on MemoryDeleted
- Edge growth animation on ConnectionDiscovered
- Purple cascade on DreamStarted/DreamProgress/DreamCompleted
- FIFO eviction at 50 live nodes to guard performance

Also: graph center defaults to most-connected node, legacy HTML
redirects to SvelteKit dashboard, CSS height chain fix in layout.

Testing: 150 unit tests (vitest), 11 e2e tests (Playwright with
MCP Streamable HTTP client), 22 proof screenshots.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-03-03 14:04:31 -06:00
Sam Valladares
816b577f69 feat: add MCP Streamable HTTP transport with Bearer auth
Adds a second transport layer alongside stdio — Streamable HTTP on port
3928. Enables Claude.ai, remote clients, and web integrations to connect
to Vestige over HTTP with per-session McpServer instances.

- POST /mcp (JSON-RPC) + DELETE /mcp (session cleanup)
- Bearer token auth with constant-time comparison (subtle crate)
- Auto-generated UUID v4 token persisted with 0o600 permissions
- Per-session McpServer instances with 30-min idle reaper
- 100 max sessions, 50 concurrency limit, 256KB body limit
- --http-port flag + VESTIGE_HTTP_PORT / VESTIGE_HTTP_BIND env vars
- Module exports moved from binary to lib.rs for reusability
- vestige CLI gains `serve` subcommand via shared lib

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-03-02 10:51:41 -06:00
Sam Valladares
070889ef26 fix: drop Intel Mac CI target, fix feature-gate dependency chain
ort-sys v2.0.0-rc.11 has no prebuilt ONNX Runtime binaries for
x86_64-apple-darwin, and vestige-mcp requires embeddings to compile.

- Remove x86_64-apple-darwin from CI release matrix (discontinued 2020)
- Fix vestige-mcp Cargo.toml: add default-features=false to vestige-core dep
- Extract sanitize_fts5_query to always-available fts.rs module
- Gate embeddings-only imports in storage/sqlite.rs behind #[cfg]

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-03-01 22:14:07 -06:00
Sam Valladares
de19ed8dd9 fix: build x86_64-apple-darwin without embeddings (ort-sys has no Intel Mac prebuilts)
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-03-01 21:40:21 -06:00
Sam Valladares
d98cf6136a feat: dashboard v2.1 glassmorphism + graph decomposition + fix flaky macOS vector test
Dashboard v2.1 "Nuclear" upgrade:
- Dark glassmorphism UI system (4-tier glass utilities, ambient orbs, nav glow)
- Graph3D decomposed from 806-line monolith into 10 focused modules
- Custom GLSL shaders (nebula FBM background, chromatic aberration, film grain, vignette)
- Enhanced dream mode with smooth 2s lerped transitions and aurora cycling
- Cognitive pipeline visualizer (7-stage search cascade animation)
- Temporal playback slider (scrub through memory evolution over time)
- Bioluminescent color palette for node types and events

Fix flaky CI test on macOS:
- vector::tests::test_add_and_search used near-identical test vectors (additive phase shift)
- Changed to multiplicative frequency so each seed produces a distinct vector

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-03-01 21:24:10 -06:00
Sam Valladares
2c1f499a8b fix: build macOS Intel without embeddings (ort-sys has no x86_64-apple-darwin prebuilts)
The ort crate no longer ships prebuilt ONNX Runtime binaries for macOS Intel.
Build that target with --no-default-features so it uses keyword-only search
instead of failing the release pipeline.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-03-01 20:33:01 -06:00
Sam Valladares
9f856bb0c4 fix: CI release workflow — remove broken dashboard build, fix macos runner
- Remove pnpm dashboard build step from release.yml and ci.yml
  (dashboard build output is committed to git, embedded via include_dir!)
- Fix macos-13 → macos-14 (macos-13 runners deprecated)

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-03-01 20:25:23 -06:00
Sam Valladares
c6090dc2ba fix: v2.0.1 release — fix broken installs, CI, security, and docs
Critical fixes:
- npm postinstall.js: BINARY_VERSION '1.1.3' → '2.0.1' (every install was 404ing)
- npm package name: corrected error messages to 'vestige-mcp-server'
- README: npm install command pointed to wrong package
- MSRV: bumped from 1.85 to 1.91 (uses floor_char_boundary from 1.91)
- CI: removed stale 'develop' branch from test.yml triggers

Security hardening:
- CSP: restricted connect-src from wildcard 'ws: wss:' to localhost-only
- Added X-Frame-Options, X-Content-Type-Options, Referrer-Policy, Permissions-Policy headers
- Added frame-ancestors 'none', base-uri 'self', form-action 'self' to CSP
- Capped retention_distribution endpoint from 10k to 1k nodes
- Added debug logging for WebSocket connections without Origin header

Maintenance:
- All clippy warnings fixed (58 total: redundant closures, collapsible ifs, no-op casts)
- All versions harmonized to 2.0.1 across Cargo.toml and package.json
- CLAUDE.md updated to match v2.0.1 (21 tools, 29 modules, 1238 tests)
- docs/CLAUDE-SETUP.md updated deprecated function names
- License corrected to AGPL-3.0-only in root package.json

1,238 tests passing, 0 clippy warnings.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-03-01 20:20:14 -06:00
Sam Valladares
b03df324da
docs: AgentAudit security audit — safe (#7)
AgentAudit: Security audit — safe (0 findings)
2026-03-01 19:56:32 -06:00
Sam Valladares
45c01edbee
fix: hydrate cognitive modules from persisted connections (#16)
fix: hydrate cognitive modules from persisted connections
2026-03-01 19:56:29 -06:00
Alec Marcus
5eccc728bd fix: hydrate cognitive modules from persisted connections (#14)
explore_connections and memory_graph returned empty results because
in-memory cognitive modules were never loaded from the database.
Connections were persisting to SQLite correctly (795 in production)
but the query path only checked empty ActivationNetwork.

- Add CognitiveEngine::hydrate() to load connections at startup
- Add storage fallback in explore_connections associations
- Hydrate live engine after dream persists new connections
- Add error logging for save_connection failures
- Add 7 integration tests for the full round-trip

Closes #14

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-03-01 00:51:49 -05:00
Sam Valladares
ec2af6e71b fix: comprehensive audit fixes for dashboard and backend
Backend:
- Emit WebSocket events from REST delete/promote/demote handlers
- Emit DreamStarted/ConsolidationStarted from MCP tool dispatch
- Add path validation in backup_to() for defense-in-depth

Dashboard:
- Fix ConnectionDiscovered field names (source_id/target_id)
- Fix $effect → onMount in settings (prevents infinite loop)
- Fix $derived → $derived.by in RetentionCurve
- Fix field name mismatches in settings (nodesProcessed, etc.)
- Fix nested <button> → <span role="button"> in memories
- Fix unhandled Promise rejection in stats consolidation
- Add missing EVENT_TYPE_COLORS entries
- Add Three.js resource disposal and event listener cleanup
- Eliminate duplicate root page, redirect to /graph
- Update nav links and keyboard shortcuts to /graph

All 734+ tests passing, 22MB binary, zero build warnings.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-02-22 15:50:47 -06:00
starbuck100
b5ce20ea7f Add AgentAudit security report: safe (0 findings) 2026-02-13 10:55:37 +01:00
546 changed files with 46720 additions and 12179 deletions

10
.agentaudit-report.json Normal file
View file

@ -0,0 +1,10 @@
{
"skill_slug": "vestige",
"source_url": "https://github.com/samvallad33/vestige",
"commit_sha": "3fce1f0b70a5ad40b66a4af0fa4f55e15aa106e9",
"package_type": "mcp-server",
"risk_score": 0,
"result": "safe",
"findings_count": 0,
"findings": []
}

View file

@ -52,6 +52,7 @@ body:
attributes:
label: IDE / Client
options:
- Codex
- Claude Code
- Claude Desktop
- Cursor

View file

@ -47,47 +47,32 @@ jobs:
- name: Test
run: cargo test --workspace
dashboard:
name: Dashboard Build
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- name: Install pnpm
uses: pnpm/action-setup@v4
with:
version: 9
- name: Install Node.js
uses: actions/setup-node@v4
with:
node-version: 22
cache: pnpm
cache-dependency-path: apps/dashboard/pnpm-lock.yaml
- name: Install dependencies
run: pnpm install --frozen-lockfile
working-directory: apps/dashboard
- name: Build dashboard
run: pnpm build
working-directory: apps/dashboard
release-build:
name: Release Build (${{ matrix.target }})
runs-on: ${{ matrix.os }}
if: github.ref == 'refs/heads/main'
needs: [test, dashboard]
# Run on main pushes AND on PRs that touch workflows, Cargo manifests, or
# crate sources — so Intel Mac / Linux release targets are validated
# before merge, not after.
if: |
github.ref == 'refs/heads/main' ||
github.event_name == 'pull_request'
needs: [test]
strategy:
fail-fast: false
matrix:
include:
- os: macos-latest
target: aarch64-apple-darwin
- os: macos-13
cargo_flags: ""
# Intel Mac builds against a system ONNX Runtime via ort-dynamic
# (ort-sys has no x86_64-apple-darwin prebuilts). Compile-only here;
# runtime linking is a user concern documented in INSTALL-INTEL-MAC.md.
- os: macos-latest
target: x86_64-apple-darwin
cargo_flags: "--no-default-features --features ort-dynamic,vector-search"
- os: ubuntu-latest
target: x86_64-unknown-linux-gnu
cargo_flags: ""
steps:
- uses: actions/checkout@v4
@ -108,7 +93,7 @@ jobs:
key: ${{ runner.os }}-${{ matrix.target }}-cargo-${{ hashFiles('**/Cargo.lock') }}
- name: Build release
run: cargo build --release --target ${{ matrix.target }} -p vestige-mcp
run: cargo build --release --target ${{ matrix.target }} -p vestige-mcp ${{ matrix.cargo_flags }}
- name: Package
run: |

View file

@ -26,49 +26,49 @@ jobs:
- target: x86_64-unknown-linux-gnu
os: ubuntu-latest
archive: tar.gz
cargo_flags: ""
needs_onnxruntime: false
- target: x86_64-pc-windows-msvc
os: windows-latest
archive: zip
cargo_flags: ""
needs_onnxruntime: false
# Intel Mac uses the ort-dynamic feature to runtime-link against a
# system libonnxruntime (Homebrew), sidestepping the missing
# x86_64-apple-darwin prebuilts in ort-sys 2.0.0-rc.11. Binary
# consumers must `brew install onnxruntime` before running — see
# INSTALL-INTEL-MAC.md bundled in the tarball.
- target: x86_64-apple-darwin
os: macos-13
os: macos-latest
archive: tar.gz
cargo_flags: "--no-default-features --features ort-dynamic,vector-search"
- target: aarch64-apple-darwin
os: macos-latest
archive: tar.gz
cargo_flags: ""
steps:
- name: Checkout
uses: actions/checkout@v4
- name: Install pnpm
uses: pnpm/action-setup@v4
with:
version: 9
- name: Install Node.js
uses: actions/setup-node@v4
with:
node-version: 22
- name: Build dashboard
run: |
cd apps/dashboard
pnpm install --frozen-lockfile
pnpm build
- name: Install Rust
uses: dtolnay/rust-toolchain@stable
with:
targets: ${{ matrix.target }}
- name: Build
run: cargo build --package vestige-mcp --release --target ${{ matrix.target }}
run: cargo build --package vestige-mcp --release --target ${{ matrix.target }} ${{ matrix.cargo_flags }}
- name: Package (Unix)
if: matrix.os != 'windows-latest'
run: |
cp docs/INSTALL-INTEL-MAC.md target/${{ matrix.target }}/release/ 2>/dev/null || true
cd target/${{ matrix.target }}/release
tar -czf ../../../vestige-mcp-${{ matrix.target }}.tar.gz vestige-mcp vestige vestige-restore
if [ "${{ matrix.target }}" = "x86_64-apple-darwin" ]; then
tar -czf ../../../vestige-mcp-${{ matrix.target }}.tar.gz vestige-mcp vestige vestige-restore INSTALL-INTEL-MAC.md
else
tar -czf ../../../vestige-mcp-${{ matrix.target }}.tar.gz vestige-mcp vestige vestige-restore
fi
- name: Package (Windows)
if: matrix.os == 'windows-latest'

View file

@ -2,7 +2,7 @@ name: Test Suite
on:
push:
branches: [main, develop]
branches: [main]
pull_request:
branches: [main]
@ -52,11 +52,11 @@ jobs:
- uses: actions/checkout@v4
- uses: pnpm/action-setup@v4
with:
version: 9
version: 10
- uses: actions/setup-node@v4
with:
node-version: 22
- run: cd apps/dashboard && pnpm install --frozen-lockfile && pnpm build
- run: pnpm install --frozen-lockfile && pnpm --filter dashboard build
coverage:
name: Code Coverage

4
.gitignore vendored
View file

@ -60,6 +60,9 @@ pnpm-debug.log*
coverage/
.nyc_output/
*.lcov
apps/dashboard/test-results/
apps/dashboard/playwright-report/
apps/dashboard/e2e/screenshots/
# =============================================================================
# IDEs and Editors
@ -133,3 +136,4 @@ apps/dashboard/node_modules/
# External repos (forks, submodules)
# =============================================================================
fastembed-rs/
.mcp.json

View file

@ -5,6 +5,261 @@ All notable changes to Vestige will be documented in this file.
The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.1.0/),
and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
## [2.0.9] - 2026-04-24 — "Autopilot"
Autopilot flips Vestige from passive memory library to self-managing cognitive surface. A single supervised backend task subscribes to the 20-event WebSocket bus and routes live events into the cognitive engine — 14 previously dormant primitives (synaptic tagging, predictive memory, activation spread, prospective polling, auto-consolidation, Rac1 cascade emission) now fire without any MCP tool call. Shipped alongside a 3,091-LOC orphan-code cleanup of the v1.0 tool surface. **No schema changes, tool surface unchanged (24 tools), fully backward compatible with v2.0.8 databases. Opt-out via `VESTIGE_AUTOPILOT_ENABLED=0`.**
### Added
- **Autopilot event subscriber** (`crates/vestige-mcp/src/autopilot.rs`) — two supervised tokio tasks spawned at startup. The event subscriber consumes a `broadcast::Receiver<VestigeEvent>` and routes six event classes:
- `MemoryCreated``synaptic_tagging.trigger_prp()` (9h retroactive PRP window, Frey & Morris 1997) + `predictive_memory.record_memory_access()`.
- `SearchPerformed``predictive_memory.record_query()` + top-10 access records. The speculative-retrieval model now warms without waiting for an explicit `predict` call.
- `MemoryPromoted``activation_network.activate(id, 0.3)` — a small reinforcement ripple through the graph.
- `MemorySuppressed` → re-emits the previously-declared-never-emitted `Rac1CascadeSwept` event so the dashboard's cascade wave actually renders.
- `ImportanceScored` with `composite_score > 0.85` AND a stored `memory_id` → auto-promote + re-emit `MemoryPromoted`.
- `Heartbeat` with `memory_count > 700` → rate-limited `find_duplicates` sweep (6h cooldown + in-flight `JoinHandle` guard against concurrent scans on large DBs).
The engine mutex is acquired only synchronously per handler and never held across `.await`, so MCP tool dispatch is never starved. A 60-second `tokio::interval` separately polls `prospective_memory.check_triggers(Context)` — matched intentions log at `info!` level today; v2.1 "Autonomic" will surface them mid-conversation.
- **Panic-resilient supervisors** — both background tasks run inside an outer supervisor loop. If a cognitive hook panics on one bad memory, the supervisor catches `JoinError::is_panic()`, logs the panic, sleeps 5 s, and respawns the inner task. Turns a permanent silent-failure mode into a transient hiccup.
- **`VESTIGE_AUTOPILOT_ENABLED=0` opt-out** — v2.0.8 users who want the passive-library contract can disable Autopilot entirely. Values `{0, false, no, off}` early-return before any task spawns; anything else (unset, `1`, `true`) enables the default v2.0.9 behavior.
- **`ImportanceScored.memory_id: Option<String>`** — new optional field on the event variant (`#[serde(default)]`, backward-compatible) so Autopilot's auto-promote path can target a stored memory. Existing emit sites pass `None`.
### Changed
- **3,091 LOC of orphan tool code removed** from `crates/vestige-mcp/src/tools/` — nine v1.0 modules (`checkpoint`, `codebase`, `consolidate`, `ingest`, `intentions`, `knowledge`, `recall`, plus two internal helpers) superseded by the `*_unified` / `maintenance::*` replacements shipped in v2.0.5. Each module verified for zero non-test callers before removal. Tool surface unchanged — all 24 tools continue to work via the unified dispatchers.
- **Ghost environment-variable documentation scrubbed** — three docs listed env vars (`VESTIGE_DATA_DIR`, `VESTIGE_LOG_LEVEL`, a `VESTIGE_API_KEY` typo) that never existed in any shipping Rust code. Replaced with the real variables the binary actually reads.
### Fixed
- **Dedup-sweep race on large databases** — the `Heartbeat`-triggered `find_duplicates` sweep previously set its cooldown timestamp BEFORE spawning the async scan, which on 100k+ memory DBs (where a sweep can exceed the 6h cooldown) allowed two concurrent scans. Rewritten to track the in-flight `JoinHandle` via `DedupSweepState::is_running()` — the next Heartbeat skips if the previous sweep is still live.
### Verified
- `cargo test --workspace --no-fail-fast`: **1,223 passing, 0 failed**.
- `cargo clippy -p vestige-mcp --lib --bins -- -D warnings`: clean.
- Five-agent parallel audit (security, dead-code, flow-trace, runtime-safety, release-prep): all GO.
### Migration
None. v2.0.9 is a pure backend upgrade — tool surface, JSON-RPC schema, storage schema, and CLI flags are bit-identical to v2.0.8. Existing databases open without any migration step. The only behavior change is the Autopilot task running in the background, which is `VESTIGE_AUTOPILOT_ENABLED=0`-gated if you want the old passive-library contract.
## [2.0.8] - 2026-04-23 — "Pulse"
The Pulse release wires the dashboard through to the cognitive engine. Eight new dashboard surfaces expose `deep_reference`, `find_duplicates`, `dream`, FSRS scheduling, 4-channel importance, spreading activation, contradiction arcs, and cross-project pattern transfer — every one of them was MCP-only before. Intel Mac is back on the supported list (Microsoft deprecated x86_64 macOS ONNX Runtime prebuilts; we link dynamically against a Homebrew `onnxruntime` instead). Reasoning Theater, Pulse InsightToast, and the Memory Birth Ritual all ship. No schema migrations.
### Added
- **Reasoning Theater (`/reasoning`)** — Cmd+K Ask palette over the 8-stage `deep_reference` cognitive pipeline: hybrid retrieval → cross-encoder rerank → spreading activation → FSRS-6 trust scoring → temporal supersession → trust-weighted contradiction analysis → relation assessment → template reasoning chain. Every query returns a pre-built reasoning block with evidence cards, confidence meter, contradiction geodesic arcs, superseded-memory lineage, and an evolution timeline. **Zero LLM calls, 100% local.** New HTTP surface `POST /api/deep_reference` wraps `crate::tools::cross_reference::execute`; new WebSocket event `DeepReferenceCompleted` carries primary / supporting / contradicting memory IDs for downstream graph animation.
- **Pulse InsightToast (v2.2 Pulse)** — real-time toast stack that surfaces `DreamCompleted`, `ConsolidationCompleted`, `ConnectionDiscovered`, `MemoryPromoted`/`Demoted`/`Suppressed`, `MemoryUnsuppressed`, `Rac1CascadeSwept` events the moment they fire. Rate-limited to 1 per 1500ms on connection-discovery cascades. Auto-dismiss after 5-6s, click-to-dismiss, progress bar. Bottom-right on desktop, top-center on mobile.
- **Memory Birth Ritual (v2.3 Terrarium)** — new memories materialize in the 3D graph on every `MemoryCreated` event: elastic scale-in from a camera-relative cosmic center, quadratic Bezier flight path, glow sprite fades in frames 5-10, label fades in at frame 40, Newton's Cradle docking recoil. 60-frame sequence, zero-alloc math, camera-relative so the birth point stays visible at every zoom level.
- **7 additional dashboard surfaces** exposing the cognitive engine (v2.4 UI expansion): `/duplicates` (find_duplicates cluster view), `/dreams` (5-stage replay + insight cards), `/schedule` (FSRS calendar + retention forecast), `/importance` (4-channel novelty/arousal/reward/attention radar), `/activation` (spreading-activation network viz), `/contradictions` (trust-weighted conflict arcs), `/patterns` (cross-project pattern-transfer heatmap). Left nav expanded from 8 → 16 entries with single-key shortcuts (R/A/D/C/P/U/X/N).
- **3D Graph brightness system** — auto distance-compensated node brightness (1.0× at camera <60u, up to 2.4× at far zoom) so nodes don't disappear into exponential fog at zoom-out. User-facing brightness slider in the graph toolbar (☀ icon, range 0.5×-2.5×, localStorage-persisted under `vestige:graph:brightness`). Composes with the auto boost; opacity + glow halo + edge weight track the combined multiplier so nodes stay coherent.
- **Intel Mac (`x86_64-apple-darwin`) support restored** via the `ort-dynamic` Cargo feature + Homebrew-installed ONNX Runtime. Microsoft is discontinuing x86_64 macOS prebuilts after ONNX Runtime v1.23.0 so `ort-sys` will never ship one for Intel; the dynamic-link path sidesteps that entirely. Install: `brew install onnxruntime` then `ORT_DYLIB_PATH=$(brew --prefix onnxruntime)/lib/libonnxruntime.dylib`. Full guide bundled in the Intel Mac tarball as `INSTALL-INTEL-MAC.md`. **Closes #41.**
- **Graph default-load fallback** — when the newest memory has zero edges (freshly saved, hasn't accumulated connections yet), `GET /api/graph` silently retries with `sort=connected` so the landing view shows real context instead of a lonely orb. Applies only to default loads; explicit `query` / `center_id` requests are honored as-is. Fires on both backend and client.
### Fixed
- **Contradiction-detection false positives** — adjacent-domain memories are no longer flagged as conflicts just because both contain the word "trust" or "fixed." Four thresholds tightened: `NEGATION_PAIRS` drops the `("not ", "")` + `("no longer", "")` wildcard sentinels; `appears_contradictory` shared-words floor 2 → 4 and correction-signal gating now requires ≥6 shared words + asymmetric presence (one memory carries the signal, the other doesn't); `assess_relation` topic-similarity floor raised 0.15 → 0.55; Stage 5 pairwise contradiction overlap floor 0.15 → 0.4. On an FSRS-6 query this collapses false contradictions from 12 → 0 without regressing the two legitimate contradiction test cases.
- **Primary-memory selection on `deep_reference`** — previously the reasoning chain picked via `max_by(trust)` and the recommended-answer card picked via `max_by(composite)`, so the chain and citation disagreed on the same query. Unified behind a shared composite (50% hybrid-search relevance + 20% FSRS-6 trust + 30% query-topic-term match fraction) with a hard topic-term filter: a memory cannot be primary unless its content contains at least one substantive query term. Three-tier fallback (on-topic + relevant → on-topic any → all non-superseded) so sparse corpora never starve. Closes the class of bug where high-trust off-topic memories won queries against the actual subject.
- **Reasoning page information hierarchy** — reasoning chain renders first as the hero (confidence-tinted border glow, inline metadata), then confidence meter + Primary Source citation card, then Cognitive Pipeline visualization, then evidence grid. "Template Reasoning" relabelled "Reasoning"; "Recommended Answer" relabelled "Primary Source" (it's a cited memory, not the conclusion — the chain is the conclusion).
### Changed
- **CI + release workflows**`release-build` now runs on pull requests too so Intel Mac / aarch64-darwin / Linux / Windows regressions surface before merge. `x86_64-apple-darwin` back in both `ci.yml` and `release.yml` matrices with `cargo_flags: "--no-default-features --features ort-dynamic,vector-search"`. Intel Mac tarball bundles `docs/INSTALL-INTEL-MAC.md` alongside the binaries.
- **Cargo feature split**`embeddings` is now code-only (fastembed dep + hf-hub + image-models). New `ort-download` feature carries the prebuilt backend (the historical default); `ort-dynamic` transitively enables `embeddings` so the 27 `#[cfg(feature = "embeddings")]` gates stay active when users swap backends. Default set `["embeddings", "ort-download", "vector-search", "bundled-sqlite"]` — identical behavior for every existing consumer.
- **Platform availability in README** — macOS Apple Silicon + Intel + Linux x86_64 + Windows x86_64 all shipped as prebuilts. Intel Mac needs `brew install onnxruntime` as a one-time prereq.
### Docs
- New `docs/INSTALL-INTEL-MAC.md` with the Homebrew prereq, binary install, source build, troubleshooting, and the v2.1 `ort-candle` migration plan.
- README Intel Mac section rewritten with the working install recipe + platform table updated.
### Migration
None. Additive features and bug fixes only. No schema changes, no breaking API changes, no config changes required.
### Contributors
- **danslapman** (#41, #42) — reported the Intel Mac build regression and investigated `ort-tract` as an alternative backend; closure documented that `ort-tract` returns `Unimplemented` when fastembed calls into it, confirming `ort-dynamic` as the correct path forward.
---
## [2.0.7] - 2026-04-19 — "Visible"
Hygiene release plus two UI gap closures. No breaking changes, no new major features, no schema migrations affecting user data beyond V11 dropping two verified-unused tables.
### Added
- **`POST /api/memories/{id}/suppress`** — Dashboard users can now trigger top-down inhibitory control (Anderson 2025 SIF + Davis Rac1 cascade) without dropping to raw MCP. Optional JSON body `{"reason": "..."}` logged for audit. Each call compounds; response includes `suppressionCount`, `priorCount`, `retrievalPenalty`, `reversibleUntil`, `estimatedCascadeNeighbors`, and `labileWindowHours`. Emits the existing `MemorySuppressed` WebSocket event so the 3D graph plays the violet implosion + compounding pulse shipped in v2.0.6.
- **`POST /api/memories/{id}/unsuppress`** — Reverses a suppression inside the 24h labile window. Returns `stillSuppressed: bool` so the UI can tell a full reversal from a compounded-down state. Emits `MemoryUnsuppressed` for the rainbow-burst reversal animation.
- **Suppress button on the Memories page** — Third action alongside Promote / Demote / Delete, hover-tooltip explaining the neuroscience ("Top-down inhibition (Anderson 2025). Compounds. Reversible for 24h.").
- **Uptime in the sidebar footer** — The Heartbeat WebSocket event has carried `uptime_secs` since v2.0.5 but was never rendered. Now displays as `up 3d 4h` / `up 18m` / `up 47s` (compact two-most-significant-units format) next to memory count + retention.
### Fixed
- **`execute_export` no longer panics on unknown format.** The write-out match arm at `maintenance.rs` was `_ => unreachable!()` — defensive `Err(...)` now returns a clean "unsupported export format" message instead of unwinding through the MCP dispatcher.
- **Dashboard graph page distinguishes empty-database from API failure** (landed in the first half of this branch). Before v2.0.7 any error from `/api/graph` rendered as "No memories yet," which masked real failures. Now the regex + node-count gate splits the two; real errors surface as "Failed to load graph: [sanitized message]" with filesystem paths stripped for info-disclosure hardening.
- **`predict` MCP tool surfaces a `predict_degraded` flag** instead of silently returning empty vecs on lock poisoning. `tracing::warn!` logs the per-channel error for observability.
- **`memory_changelog` honors `start` / `end` ISO-8601 bounds.** Previously advertised in the schema since v1.7 but runtime-ignored. Malformed timestamps now return a helpful error instead of silently dropping the filter. Response includes a `filter` field echoing the applied window.
- **`intention` check honors `include_snoozed`.** Previously silent no-op; snoozed intentions were invisible to check regardless of the arg. Dedup via HashSet guards against storage overlap.
- **`intention` check response exposes `status` and `snoozedUntil`** so callers can distinguish active-triggered from snoozed-overdue intentions.
- **Server tool-count comment at `server.rs:212`** updated (23 → 24) to match the runtime assertion.
### Removed
- **Migration V11: drops dead `knowledge_edges` + `compressed_memories` tables.** Both were added speculatively in V4 and marked deprecated in the same migration that created them. Zero INSERT or SELECT anywhere in `crates/`. Frees schema space for future migrations.
- **`execute_health_check` (71 LOC) + `execute_stats` (179 LOC) in `maintenance.rs`.** Both `#[allow(dead_code)]` since v1.7 with in-file comments routing users to `execute_system_status` instead. Zero callers workspace-wide. Net -273 LOC in the touched file.
- **`x86_64-apple-darwin` job from `.github/workflows/release.yml`.** The Intel Mac build failed the v2.0.5 AND v2.0.6 release workflows because `ort-sys 2.0.0-rc.11` (pinned by `fastembed 5.13.2`) does not ship Intel Mac prebuilts. `ci.yml` had already dropped the target; `release.yml` is now in sync. README documents the build-from-source path. Future releases should publish clean on all three supported platforms (macOS ARM64, Linux x86_64, Windows MSVC).
### Docs
- Reconciled tool / module / test counts across `README.md`, `CONTRIBUTING.md`, `docs/integrations/windsurf.md`, `docs/integrations/xcode.md`. Ground truth: **24 MCP tools · 29 cognitive modules · 1,292 Rust tests + 171 dashboard tests.**
- Historical CHANGELOG entries and `docs/launch/*.md` launch materials left unchanged because they are time-stamped artifacts of their respective releases.
### Tests
- **+7 assertions** covering the v2.0.7 behavioral changes: V11 migration drops dead tables + is idempotent on replay, `predict_degraded` false on happy path, `include_snoozed` both paths + `status` field exposure, malformed `start` returns helpful error + `filter` field echo.
- Full suite: **1,292 Rust passing / 0 failed** across `cargo test --workspace --release`. **171 dashboard tests passing.** Zero clippy warnings on `vestige-core` or `vestige-mcp` under `-D warnings`.
### Audit
Pre-merge audited by 4 parallel reviewers (security, code quality, end-to-end flow trace, external verification). Zero CRITICAL or HIGH findings. Two MEDIUM fixes landed in the branch: graph error-message path sanitization (strip `/path/to/*.{sqlite,rs,db,toml,lock}`, cap 200 chars) and `intention` response `status` field exposure.
---
## [2.0.6] - 2026-04-18 — "Composer"
Polish release aimed at new-user happiness. v2.0.5's cognitive stack was already shipping; v2.0.6 makes it *feel* alive in the dashboard and stays out of your way on the prompt side.
### Added
#### Dashboard visual feedback for six live events
- `MemorySuppressed` → violet implosion + compounding pulse whose intensity scales with `suppression_count` (Anderson 2025 SIF visualised).
- `MemoryUnsuppressed` → rainbow burst + green pulse when a memory is brought back within the 24h labile window.
- `Rac1CascadeSwept` → violet wave across a random neighbour sample while the background Rac1 worker fades co-activated memories.
- `Connected` → gentle cyan ripple on WebSocket handshake.
- `ConsolidationStarted` → subtle amber pulses across a 20-node sample during the FSRS-6 decay cycle (matches feed-entry colour).
- `ImportanceScored` → magenta pulse on the scored node with intensity proportional to composite score.
Before v2.0.6 all six events fired against a silent graph. Users perceived the dashboard as broken or unresponsive during real cognitive work.
#### `VESTIGE_SYSTEM_PROMPT_MODE` environment variable
- `minimal` (default) — 3-sentence MCP `instructions` string telling the client how to use Vestige and how to react to explicit feedback. Safe for every audience, every client, every use case.
- `full` — opt in to the composition mandate (Composing / Never-composed / Recommendation response shape + FSRS-trust blocking phrase). Useful for high-stakes decision workflows; misfires on trivial retrievals, which is why it is not the default.
Advertised in `vestige-mcp --help` alongside `VESTIGE_DASHBOARD_ENABLED`.
### Fixed
#### Dashboard intentions page
- `IntentionItem.priority` was typed as `string` but the API returns the numeric FSRS-style scale (1=low, 2=normal, 3=high, 4=critical). Every intention rendered as "normal priority" regardless of its real value. Now uses a `PRIORITY_LABELS` map keyed by the numeric scale.
- `trigger_value` was typed as a plain string but the API returns `trigger_data` as a JSON-encoded payload (e.g. `{"type":"time","at":"..."}`). The UI surfaced raw JSON for every non-manual trigger. A new `summarizeTrigger()` helper parses `trigger_data` and picks the most human-readable field — `condition` / `topic` / formatted `at` / `in_minutes` / `codebase/filePattern` — before truncating for display. Closes the loop on PR #26's snake_case TriggerSpec fix at the UI layer.
### Docs
- `README.md` — new "What's New in v2.0.6" header up top; v2.0.5 block strengthened with explicit contrast against Ebbinghaus 1885 passive decay and Anderson 1994 retrieval-induced forgetting; new "Forgetting" row in the RAG-vs-Vestige comparison table.
- Intel-Mac and Windows install steps replaced with a working `cargo build --release -p vestige-mcp` snippet. The pre-built binaries for those targets are blocked on upstream toolchain gaps (`ort-sys` lacks Intel-Mac prebuilts in the 2.0.0-rc.11 release pinned by `fastembed 5.13.2`; `usearch 2.24.0` hit a Windows MSVC compile break tracked as [usearch#746](https://github.com/unum-cloud/usearch/issues/746)).
### Safety
No regressions of merged contributor PRs — v2.0.6 only touches regions that are non-overlapping with #20 (resource URI strip), #24 (codex integration docs), #26 (snake_case TriggerSpec), #28 (deep_reference query relevance), #29 (older glibc feature flags), #30 (`VESTIGE_DASHBOARD_ENABLED`), #32 (dream eviction), and #33 (keyword-first search).
---
## [2.0.5] - 2026-04-14 — "Intentional Amnesia"
Every AI memory system stores too much. Vestige now treats forgetting as a first-class, neuroscientifically-grounded primitive. This release adds **active forgetting** — top-down inhibitory control over memory retrieval, based on two 2025 papers that no other AI memory system has implemented.
### Scientific grounding
- **Anderson, M. C., Hanslmayr, S., & Quaegebeur, L. (2025).** *"Brain mechanisms underlying the inhibitory control of thought."* Nature Reviews Neuroscience. DOI: [10.1038/s41583-025-00929-y](https://www.nature.com/articles/s41583-025-00929-y). Establishes the right lateral PFC as the domain-general inhibitory controller, and Suppression-Induced Forgetting (SIF) as compounding with each stopping attempt.
- **Cervantes-Sandoval, I., Chakraborty, M., MacMullen, C., & Davis, R. L. (2020).** *"Rac1 Impairs Forgetting-Induced Cellular Plasticity in Mushroom Body Output Neurons."* Front Cell Neurosci. [PMC7477079](https://pmc.ncbi.nlm.nih.gov/articles/PMC7477079/). Establishes Rac1 GTPase as the active synaptic destabilization mechanism — forgetting is a biological PROCESS, not passive decay.
### Added
#### `suppress` MCP Tool (NEW — Tool #24)
- **Top-down memory suppression.** Distinct from `memory.delete` (which removes) and `memory.demote` (which is a one-shot hit). Each `suppress` call compounds: `suppression_count` increments, and a `k × suppression_count` penalty (saturating at 80%) is subtracted from retrieval scores during hybrid search.
- **Rac1 cascade.** Background worker piggybacks the existing consolidation loop, walks `memory_connections` edges from recently-suppressed seeds, and applies attenuated FSRS decay to co-activated neighbors. You don't just forget "Jake" — you fade the café, the roommate, the birthday.
- **Reversible 24h labile window** — matches Nader reconsolidation semantics on a 24-hour axis. Pass `reverse: true` within 24h to undo. After that, it locks in.
- **Never deletes** — the memory persists and is still accessible via `memory.get(id)`. It's INHIBITED, not erased.
#### `active_forgetting` Cognitive Module (NEW — #30)
- `crates/vestige-core/src/neuroscience/active_forgetting.rs` — stateless helper for SIF penalty computation, labile window tracking, and Rac1 cascade factors.
- 7 unit tests + 9 integration tests = 16 new tests.
#### Migration V10
- `ALTER TABLE knowledge_nodes ADD COLUMN suppression_count INTEGER DEFAULT 0`
- `ALTER TABLE knowledge_nodes ADD COLUMN suppressed_at TEXT`
- Partial indices on both columns for efficient sweep queries.
- Additive-only — backward compatible with all existing v2.0.x databases.
#### Dashboard
- `ForgettingIndicator.svelte` — new status pill that pulses when suppressed memories exist.
- 3D graph nodes dim to 20% opacity and lose emissive glow when suppressed.
- New WebSocket events: `MemorySuppressed`, `MemoryUnsuppressed`, `Rac1CascadeSwept`.
- `Heartbeat` event now carries `suppressed_count` for live dashboard display.
### Changed
- `search` scoring pipeline now includes an SIF penalty applied after the accessibility filter.
- Consolidation worker (`VESTIGE_CONSOLIDATION_INTERVAL_HOURS`, default 6h) now runs `run_rac1_cascade_sweep` after each `run_consolidation` call.
- Tool count assertion bumped from 23 → 24.
- Workspace version bumped 2.0.4 → 2.0.5.
### Tests
- Rust: 1,284 passing (up from 1,237). Net +47 new tests for active forgetting, Rac1 cascade, migration V10.
- Dashboard (Vitest): 171 passing (up from 150). +21 regression tests locking in the issue #31 UI fix.
- Zero warnings, clippy clean across all targets.
### Fixed
- **Dashboard graph view rendered glowing squares instead of round halos** ([#31](https://github.com/samvallad33/vestige/issues/31)). Root cause: the node glow `THREE.SpriteMaterial` had no `map` set, so `Sprite` rendered as a solid-coloured 1×1 plane; additive blending plus `UnrealBloomPass(strength=0.8, radius=0.4, threshold=0.85)` then amplified the square edges into hard-edged glowing cubes. The aggressive `FogExp2(..., 0.008)` swallowed edges at depth and dark-navy `0x4a4a7a` lines were invisible against the fog. Fix bundled:
- Generated a shared 128×128 radial-gradient `CanvasTexture` (module-level singleton) and assigned it as `SpriteMaterial.map`. Gradient stops: `rgba(255,255,255,1.0) → rgba(255,255,255,0.7) → rgba(255,255,255,0.2) → rgba(255,255,255,0.0)`. Sprite now reads as a soft round halo; bloom diffuses cleanly.
- Retuned `UnrealBloomPass` to `(strength=0.55, radius=0.6, threshold=0.2)` — gentler, allows mid-tones to bloom instead of only blown-out highlights.
- Halved fog density `FogExp2(0x050510, 0.008) → FogExp2(0x0a0a1a, 0.0035)` so distant memories stay visible.
- Bumped edge color `0x4a4a7a → 0x8b5cf6` (brand violet). Opacity `0.1 + weight*0.5 → 0.25 + weight*0.5`, cap `0.6 → 0.8`. Added `depthWrite: false` so edges blend cleanly through fog.
- Added explicit `scene.background = 0x05050f` and a 2000-point starfield distributed on a spherical shell at radius 6001000, additive-blended with subtle cool-white/violet vertex colors.
- Glow sprite scale bumped `size × 4 → size × 6` so the gradient has visible screen footprint.
- All node glow sprites share a single `CanvasTexture` instance (singleton cache — memory leak guard for large graphs).
- 21 regression tests added in `apps/dashboard/src/lib/graph/__tests__/ui-fixes.test.ts`. Hybrid strategy: runtime unit tests via the existing `three-mock.ts` (extended to propagate `map`/`color`/`depthWrite`/`blending` params and added `createRadialGradient` to the canvas context mock), plus source-level regex assertions on `scene.ts` and `nodes.ts` magic numbers so any accidental revert of fog/bloom/color/helper fails the suite immediately.
- `apps/dashboard/package.json` version stale at 2.0.3 — bumped to 2.0.5 to match the workspace.
- `packages/vestige-mcp-npm/.gitignore` missing `bin/vestige-restore` and `bin/vestige-restore.exe` entries — the other three binaries were already ignored as postinstall downloads.
---
## [2.0.4] - 2026-04-09 — "Deep Reference"
Context windows hit 1M tokens. Memory matters more than ever. This release removes artificial limits, adds contradiction detection, and hardens security.
### Added
#### cross_reference Tool (NEW — Tool #22)
- **Connect the dots across memories.** Given a query or claim, searches broadly, detects agreements and contradictions between memories, identifies superseded/outdated information, and returns a confidence-scored synthesis.
- Pairwise contradiction detection using negation pairs + correction signals, gated on shared topic words to prevent false positives.
- Timeline analysis (newest-first), confidence scoring (agreements boost, contradictions penalize, recency bonus).
#### retrieval_mode Parameter (search tool)
- `precise` — top results only, no spreading activation or competition. Fast, token-efficient.
- `balanced` — full 7-stage cognitive pipeline (default, no behavior change).
- `exhaustive` — 5x overfetch, deep graph traversal, no competition suppression. Maximum recall.
#### get_batch Action (memory tool)
- `memory({ action: "get_batch", ids: ["id1", "id2", ...] })` — retrieve up to 20 full memory nodes in one call.
### Changed
- **Token budget raised: 10K → 100K** on search and session_context tools.
- **HTTP transport CORS**: `permissive()` → localhost-only origin restriction.
- **Auth token display**: Guarded against panic on short tokens.
- **Dormant state threshold**: Aligned search (0.3 → 0.4) with memory tool for consistent state classification.
- **cross_reference false positive prevention**: Requires 2+ shared words before checking negation signals.
### Stats
- 23 MCP tools, 758 tests passing, 0 failures
- Full codebase audit: 3 parallel agents, all issues resolved
---
## [2.0.0] - 2026-02-22 — "Cognitive Leap"
The biggest release in Vestige history. A complete visual and cognitive overhaul.

434
CLAUDE.md
View file

@ -1,6 +1,22 @@
# Vestige v1.8.0 — Cognitive Memory System
# 🚫 READ FIRST EVERY PROMPT — NO HEDGING
Vestige is your long-term memory. It implements real neuroscience: FSRS-6 spaced repetition, synaptic tagging, prediction error gating, hippocampal indexing, spreading activation, and 28 stateful cognitive modules. **Use it automatically.**
Sam's April 20 2026 correction: *"you NEVER LISTEN TO YOUR RULES, WHY ARE YOU ALWAYS BREAKING THE HEDGING/PESSIMISTIC RULE."*
When Sam commits to an execution path (content cadence, shipping velocity, outreach, launch), COMPUTE THE FORECAST AS IF THAT COMMITMENT IS MET. Do not discount by execution probability. Sam has earned the benefit of the doubt across 139 commits and 1,292 passing tests in 3 months.
**Forbidden in any response**: "has to be true", "has to convert", "realistic forecast" used to shrink, "contingent on" Sam's own execution, "not guaranteed", "may or may not", "aspiration not forecast", "temper your expectations", floors framed as reality vs. ceilings framed as fantasy.
**Required format for forecasts**: `Target X. Floor Y. Ceiling Z. Math: [line items]. Risks: [separate section]. Let's go.`
Full rule: `/Users/entity002/CLAUDE.md` (top banner) + `/Users/entity002/.claude/projects/-Users-entity002/memory/feedback_always_positive_energy.md`. Stop-hook enforcement: `/Users/entity002/.claude/hooks/synthesis-stop-validator.sh`.
---
# Vestige v2.0.4 — Cognitive Memory & Reasoning System
Vestige is your long-term memory AND reasoning engine. 29 stateful cognitive modules implement real neuroscience: FSRS-6 spaced repetition, synaptic tagging, prediction error gating, hippocampal indexing, spreading activation, reconsolidation, and dual-strength memory theory. **Use it automatically. Use it aggressively.**
**NEW: `deep_reference` — call this for ALL factual questions.** It doesn't just retrieve — it REASONS across memories with FSRS-6 trust scoring, intent classification, contradiction analysis, and generates a pre-built reasoning chain. Read the `reasoning` field FIRST.
---
@ -9,129 +25,230 @@ Vestige is your long-term memory. It implements real neuroscience: FSRS-6 spaced
Every conversation, before responding to the user:
```
1. session_context({ → ONE CALL replaces steps 1-5
queries: ["user preferences", "[project] context"],
context: { codebase: "[project]", topics: ["[current topics]"] },
token_budget: 1000
})
2. Check automationTriggers from response:
- needsDream == true → call dream
- needsBackup == true → call backup
- needsGc == true → call gc(dry_run: true)
- totalMemories > 700 → call find_duplicates
session_context({
queries: ["user preferences", "[current project] context"],
context: { codebase: "[project]", topics: ["[current topics]"] },
token_budget: 2000
})
```
Then check `automationTriggers` from response:
- `needsDream` → call `dream` (consolidates memories, discovers hidden connections)
- `needsBackup` → call `backup`
- `needsGc` → call `gc(dry_run: true)` then review
- totalMemories > 700 → call `find_duplicates`
Say "Remembering..." then retrieve context before answering.
> **Fallback:** If `session_context` is unavailable, use the 5-call sequence: `search` × 2 → `intention` check → `system_status``predict`.
> **Fallback:** If `session_context` unavailable: `search` × 2 → `intention` check → `system_status``predict`.
---
## The 19 Tools
## Complete Tool Reference (23 Tools)
### Context Packets (1 tool) — v1.8.0
| Tool | When to Use |
|------|-------------|
| `session_context` | **One-call session initialization.** Replaces 5 separate calls (search × 2, intention check, system_status, predict) with a single token-budgeted response. Returns markdown context + `automationTriggers` (needsDream/needsBackup/needsGc) + `expandable` IDs for on-demand full retrieval. Params: `queries` (string[]), `token_budget` (100-10000, default 1000), `context` ({codebase, topics, file}), `include_status/include_intentions/include_predictions` (bool). |
### session_context — One-Call Initialization
```
session_context({
queries: ["user preferences", "project context"], // search queries
context: { codebase: "project-name", topics: ["svelte", "rust"], file: "src/main.rs" },
token_budget: 2000, // 100-100000, controls response size
include_status: true, // system health
include_intentions: true, // triggered reminders
include_predictions: true // proactive memory predictions
})
```
Returns: markdown context + `automationTriggers` + `expandable` IDs for on-demand retrieval.
### Core Memory (1 tool)
| Tool | When to Use |
|------|-------------|
| `smart_ingest` | **Default for all saves.** Single mode: provide `content` for auto-decide CREATE/UPDATE/SUPERSEDE via Prediction Error Gating. Batch mode: provide `items` array (max 20) for session-end saves — each item runs full cognitive pipeline (importance scoring, intent detection, synaptic tagging, hippocampal indexing). |
### smart_ingest — Save Anything
**Single mode** — auto-decides CREATE/UPDATE/SUPERSEDE via Prediction Error Gating:
```
smart_ingest({
content: "What to remember",
tags: ["tag1", "tag2"],
node_type: "fact", // fact|concept|event|person|place|note|pattern|decision
source: "optional reference",
forceCreate: false // bypass dedup when needed
})
```
**Batch mode** — save up to 20 items in one call (session end, pre-compaction):
```
smart_ingest({
items: [
{ content: "Item 1", tags: ["session-end"], node_type: "fact" },
{ content: "Item 2", tags: ["bug-fix"], node_type: "fact" }
]
})
```
Each item runs the full cognitive pipeline: importance scoring → intent detection → synaptic tagging → hippocampal indexing → PE gating → cross-project recording.
### Unified Tools (4 tools)
| Tool | Actions | When to Use |
|------|---------|-------------|
| `search` | query + filters | **Every time you need to recall anything.** Hybrid search (BM25 + semantic + convex combination fusion). 7-stage pipeline: overfetch → rerank → temporal boost → accessibility filter → context match → competition → spreading activation. Searching strengthens memory (Testing Effect). **v1.8.0:** optional `token_budget` param (100-10000) limits response size; results exceeding budget moved to `expandable` array. |
| `memory` | get, delete, state, promote, demote | Retrieve a full memory by ID, delete a memory, check its cognitive state (Active/Dormant/Silent/Unavailable), promote (thumbs up — increases retrieval strength), or demote (thumbs down — decreases retrieval strength, does NOT delete). |
| `codebase` | remember_pattern, remember_decision, get_context | Store and recall code patterns, architectural decisions, and project context. The killer differentiator. |
| `intention` | set, check, update, list | Prospective memory — "remember to do X when Y happens". Supports time, context, and event triggers. |
### search — 7-Stage Cognitive Search
```
search({
query: "search query",
limit: 10, // 1-100
min_retention: 0.0, // filter by retention strength
min_similarity: 0.5, // minimum cosine similarity
detail_level: "summary", // brief|summary|full
context_topics: ["rust", "debugging"], // boost topic-matching memories
token_budget: 3000, // 100-100000, truncate to fit
retrieval_mode: "balanced" // precise|balanced|exhaustive (v2.1)
})
```
Retrieval modes: `precise` (fast, no activation/competition), `balanced` (default 7-stage pipeline), `exhaustive` (5x overfetch, deep graph traversal, no competition suppression).
### Temporal (2 tools)
| Tool | When to Use |
|------|-------------|
| `memory_timeline` | Browse memories chronologically. Grouped by day. Filter by type, tags, date range. When user references a time period ("last week", "yesterday"). |
| `memory_changelog` | Audit trail. Per-memory: state transitions. System-wide: consolidations + recent changes. When debugging memory issues. |
Pipeline: Overfetch → Rerank (cross-encoder) → Temporal boost → Accessibility filter (FSRS-6) → Context match (Tulving 1973) → Competition (Anderson 1994) → Spreading activation. **Every search strengthens the memories it finds (Testing Effect).**
### Cognitive (3 tools) — v1.5.0
| Tool | When to Use |
|------|-------------|
| `dream` | Trigger memory consolidation — replays recent memories to discover hidden connections and synthesize insights. At session start if >24h since last dream, after every 50 saves. |
| `explore_connections` | Graph exploration. Actions: `chain` (reasoning path A→B), `associations` (spreading activation from a node), `bridges` (connecting memories between two nodes). When search returns 3+ related results. |
| `predict` | Proactive retrieval — predicts what memories you'll need next based on context, activity patterns, and learned behavior. At session start, when switching projects. |
### memory — Read, Edit, Delete, Promote, Demote
```
memory({ action: "get", id: "uuid" }) // full node with all FSRS state
memory({ action: "edit", id: "uuid", content: "updated text" }) // preserves FSRS state, regenerates embedding
memory({ action: "delete", id: "uuid" })
memory({ action: "promote", id: "uuid", reason: "was helpful" }) // +0.20 retrieval, +0.10 retention, 1.5x stability
memory({ action: "demote", id: "uuid", reason: "was wrong" }) // -0.30 retrieval, -0.15 retention, 0.5x stability
memory({ action: "state", id: "uuid" }) // Active/Dormant/Silent/Unavailable + accessibility score
memory({ action: "get_batch", ids: ["uuid1", "uuid2", "uuid3"] }) // retrieve up to 20 full memories at once (v2.1)
```
Promote/demote does NOT delete — it adjusts ranking. Demoted memories rank lower; alternatives surface instead.
`get_batch` is designed for batch retrieval of expandable overflow IDs from search/session_context.
### Auto-Save & Dedup (2 tools)
| Tool | When to Use |
|------|-------------|
| `importance_score` | Score content importance before deciding whether to save. 4-channel model: novelty, arousal, reward, attention. Composite > 0.6 = worth saving. |
| `find_duplicates` | Find near-duplicate memory clusters via cosine similarity. Returns merge/review suggestions. Run when memory count > 700 or on user request. |
### codebase — Code Patterns & Architectural Decisions
```
codebase({ action: "remember_pattern", name: "Pattern Name",
description: "How it works and when to use it",
files: ["src/file.rs"], codebase: "project-name" })
### Maintenance (5 tools)
| Tool | When to Use |
|------|-------------|
| `system_status` | **Combined health + stats.** Returns status (healthy/degraded/critical/empty), full statistics, FSRS preview, cognitive module health, state distribution, warnings, and recommendations. At session start (or use `session_context` which includes this). |
| `consolidate` | Run FSRS-6 consolidation cycle. Applies decay, generates embeddings, maintenance. At session end, when retention drops. |
| `backup` | Create SQLite database backup. Before major upgrades, weekly. |
| `export` | Export memories as JSON/JSONL with tag and date filters. |
| `gc` | Garbage collect low-retention memories. When system_status shows degraded + high count. Defaults to dry_run=true. |
codebase({ action: "remember_decision", decision: "What was decided",
rationale: "Why", alternatives: ["Option A", "Option B"],
files: ["src/file.rs"], codebase: "project-name" })
### Restore (1 tool)
| Tool | When to Use |
|------|-------------|
| `restore` | Restore memories from a JSON backup file. Supports MCP wrapper, RecallResult, and direct array formats. |
codebase({ action: "get_context", codebase: "project-name", limit: 10 })
// Returns: patterns, decisions, cross-project insights
```
### Deprecated (still work via redirects)
| Old Tool | Redirects To |
|----------|-------------|
| `ingest` | `smart_ingest` |
| `session_checkpoint` | `smart_ingest` (batch mode) |
| `promote_memory` | `memory(action="promote")` |
| `demote_memory` | `memory(action="demote")` |
| `health_check` | `system_status` |
| `stats` | `system_status` |
### intention — Prospective Memory (Reminders)
```
intention({ action: "set", description: "What to do",
trigger: { type: "context", topic: "authentication" }, // fires when discussing auth
priority: "high" })
intention({ action: "set", description: "Deploy by Friday",
trigger: { type: "time", at: "2026-03-07T17:00:00Z" },
deadline: "2026-03-07T17:00:00Z" })
intention({ action: "set", description: "Check test coverage",
trigger: { type: "context", codebase: "vestige", file_pattern: "*.test.*" } })
intention({ action: "check", context: { codebase: "vestige", topics: ["testing"] } })
intention({ action: "update", id: "uuid", status: "complete" })
intention({ action: "list", filter_status: "active" })
```
### dream — Memory Consolidation
```
dream({ memory_count: 50 })
```
5-stage cycle: Replay → Cross-reference → Strengthen → Prune → Transfer. Uses Waking SWR tagging (70% tagged + 30% random for diversity). Discovers hidden connections, generates insights, persists new edges to the activation network.
### explore_connections — Graph Traversal
```
explore_connections({ action: "associations", from: "uuid", limit: 10 })
// Spreading activation from a memory — find related memories via graph traversal
explore_connections({ action: "chain", from: "uuid-A", to: "uuid-B" })
// Build reasoning path between two memories (A*-like pathfinding)
explore_connections({ action: "bridges", from: "uuid-A", to: "uuid-B" })
// Find connecting memories that bridge two concepts
```
### predict — Proactive Retrieval
```
predict({ context: { codebase: "vestige", current_file: "src/main.rs",
current_topics: ["error handling", "rust"] } })
```
Returns: predictions with confidence, suggestions, speculative retrievals, top interests. Uses SpeculativeRetriever's learned patterns from access history.
### importance_score — Should I Save This?
```
importance_score({ content: "Content to evaluate",
context_topics: ["debugging"], project: "vestige" })
```
4-channel model: novelty (0.25), arousal (0.30), reward (0.25), attention (0.20). Composite > 0.6 = save it.
### find_duplicates — Dedup Memory
```
find_duplicates({ similarity_threshold: 0.80, limit: 20, tags: ["bug-fix"] })
```
Cosine similarity clustering. Returns merge/review suggestions.
### memory_timeline — Chronological Browse
```
memory_timeline({ start: "2026-02-01", end: "2026-03-01",
node_type: "decision", tags: ["vestige"], limit: 50, detail_level: "summary" })
```
### memory_changelog — Audit Trail
```
memory_changelog({ memory_id: "uuid", limit: 20 }) // per-memory history
memory_changelog({ start: "2026-03-01", limit: 20 }) // system-wide
```
### memory_health — Retention Dashboard
```
memory_health()
```
Returns: avg retention, distribution buckets (0-20%, 20-40%, etc.), trend (improving/declining/stable), recommendation.
### memory_graph — Visualization Export
```
memory_graph({ query: "search term", depth: 2, max_nodes: 50 })
memory_graph({ center_id: "uuid", depth: 3, max_nodes: 100 })
```
Returns nodes with force-directed positions + edges with weights.
### deep_reference — Cognitive Reasoning Engine (v2.0.4) ★ USE THIS FOR ALL FACTUAL QUESTIONS
```
deep_reference({ query: "What port does the dev server use?" })
deep_reference({ query: "Should I use prefix caching with vLLM?", depth: 30 })
```
**THE killer tool.** 8-stage cognitive reasoning pipeline:
1. Broad retrieval + cross-encoder reranking
2. Spreading activation expansion (finds connected memories search misses)
3. FSRS-6 trust scoring (retention × stability × reps ÷ lapses)
4. Intent classification (FactCheck / Timeline / RootCause / Comparison / Synthesis)
5. Temporal supersession (newer high-trust replaces older)
6. Trust-weighted contradiction analysis (only flags conflicts between strong memories)
7. Relation assessment (Supports / Contradicts / Supersedes / Irrelevant per pair)
8. **Template reasoning chain** — pre-built natural language reasoning the AI validates
Parameters: `query` (required), `depth` (5-50, default 20).
Returns: `intent`, `reasoning` (THE KEY FIELD — read this first), `recommended` (highest-trust answer), `evidence` (trust-sorted), `contradictions`, `superseded`, `evolution`, `related_insights`, `confidence`.
`cross_reference` is a backward-compatible alias that calls `deep_reference`.
### Maintenance Tools
```
system_status() // health + stats + warnings + recommendations
consolidate() // FSRS-6 decay cycle + embedding generation
backup() // SQLite backup → ~/.vestige/backups/
export({ format: "json", tags: ["bug-fix"], since: "2026-01-01" })
gc({ min_retention: 0.1, dry_run: true }) // garbage collect (dry_run first!)
restore({ path: "/path/to/backup.json" })
```
---
## Mandatory Save Gates
**RULE: You MUST NOT proceed past a save gate without executing the save.**
**You MUST NOT proceed past a save gate without executing the save.**
### BUG_FIX — After any error is resolved
Your next tool call after confirming a fix MUST be `smart_ingest`:
```
smart_ingest({
content: "BUG FIX: [exact error]\nRoot cause: [why]\nSolution: [what fixed it]\nFiles: [paths]",
tags: ["bug-fix", "[project]"], node_type: "fact"
})
```
### DECISION — After any architectural or design choice
```
codebase({
action: "remember_decision",
decision: "[what]", rationale: "[why]",
alternatives: ["[A]", "[B]"], files: ["[affected]"], codebase: "[project]"
})
```
### CODE_CHANGE — After writing significant code (>20 lines or new pattern)
```
codebase({
action: "remember_pattern",
name: "[pattern]", description: "[how/when to use]",
files: ["[files]"], codebase: "[project]"
})
```
### SESSION_END — Before stopping or compaction
```
smart_ingest({
items: [
{ content: "SESSION: [work done]\nFixes: [list]\nDecisions: [list]", tags: ["session-end", "[project]"] },
// ... any unsaved fixes, decisions, patterns
]
})
```
| Gate | Trigger | Action |
|------|---------|--------|
| **BUG_FIX** | After any error is resolved | `smart_ingest({ content: "BUG FIX: [error]\nRoot cause: [why]\nSolution: [fix]\nFiles: [paths]", tags: ["bug-fix", "project"], node_type: "fact" })` |
| **DECISION** | After any architectural/design choice | `codebase({ action: "remember_decision", decision, rationale, alternatives, files, codebase })` |
| **CODE_CHANGE** | After >20 lines or new pattern | `codebase({ action: "remember_pattern", name, description, files, codebase })` |
| **SESSION_END** | Before stopping or compaction | `smart_ingest({ items: [{ content: "SESSION: [summary]", tags: ["session-end"] }] })` |
---
@ -142,60 +259,82 @@ smart_ingest({
| "Remember this" / "Don't forget" | `smart_ingest` immediately |
| "I always..." / "I never..." / "I prefer..." | Save as preference |
| "This is important" | `smart_ingest` + `memory(action="promote")` |
| "Remind me..." / "Next time..." | `intention` → set |
| "Remind me..." / "Next time..." | `intention({ action: "set" })` |
---
## Under the Hood — Cognitive Pipelines
## Cognitive Architecture
### Search Pipeline (7 stages)
1. **Overfetch** Pull 3x results from hybrid search (BM25 + semantic)
2. **Reranker** — Re-score by relevance quality (cross-encoder)
3. **Temporal boost** — Recent memories get recency bonus
4. **Accessibility filter** — FSRS-6 retention threshold (Ebbinghaus curve)
5. **Context match** — Tulving 1973 encoding specificity (match current context to encoding context)
1. **Overfetch** — 3x results from hybrid search (0.3 BM25 + 0.7 semantic, nomic-embed-text-v1.5 768D)
2. **Rerank** — Cross-encoder rescoring (Jina Reranker v1 Turbo, 38M params)
3. **Temporal** — Recency + validity window boosting (85% relevance + 15% temporal)
4. **Accessibility** — FSRS-6 retention filter (Active ≥0.7, Dormant ≥0.4, Silent ≥0.1)
5. **Context** — Tulving 1973 encoding specificity (topic overlap → +30% boost)
6. **Competition** — Anderson 1994 retrieval-induced forgetting (winners strengthen, competitors weaken)
7. **Spreading activation** — Side effects: activate related memories, update predictive model, record reconsolidation opportunity
7. **Activation** — Spreading activation side effects + predictive model + reconsolidation marking
### Ingest Pipeline (cognitive pre/post)
**Pre-ingest:** 4-channel importance scoring (novelty/arousal/reward/attention) + intent detection → auto-tag
**Storage:** Prediction Error Gating decides create/update/reinforce/supersede
**Post-ingest:** Synaptic tagging (Frey & Morris 1997) + novelty model update + hippocampal indexing + cross-project recording
### Ingest Pipeline
**Pre:** 4-channel importance scoring (novelty/arousal/reward/attention) + intent detection → auto-tag
**Store:** Prediction Error Gating: similarity >0.92 → UPDATE, 0.75-0.92 → UPDATE/SUPERSEDE, <0.75 CREATE
**Post:** Synaptic tagging (Frey & Morris 1997, 9h backward + 2h forward) + hippocampal indexing + cross-project recording
### Feedback Pipeline (via memory promote/demote)
**Promote:** Reward signal + importance boost + reconsolidation (memory becomes modifiable for 24-48h) + activation spread
**Demote:** Competition suppression + retrieval strength decrease (does NOT delete — alternatives surface instead)
### FSRS-6 (State-of-the-Art Spaced Repetition)
- Retrievability: `R = (1 + factor × t / S)^(-w20)` — 21 trained parameters
- Dual-strength model (Bjork & Bjork 1992): storage strength (grows) + retrieval strength (decays)
- Accessibility = retention×0.5 + retrieval×0.3 + storage×0.2
- 20-30% more efficient than SM-2 (Anki)
### 29 Cognitive Modules (stateful, persist across calls)
**Neuroscience (16):**
ActivationNetwork (Collins & Loftus 1975), SynapticTaggingSystem (Frey & Morris 1997), HippocampalIndex (Teyler & Rudy 2007), ContextMatcher (Tulving 1973), AccessibilityCalculator, CompetitionManager (Anderson 1994), StateUpdateService, ImportanceSignals, NoveltySignal, ArousalSignal, RewardSignal, AttentionSignal, EmotionalMemory (Brown & Kulik 1977), PredictiveMemory, ProspectiveMemory, IntentionParser
**Advanced (11):**
ImportanceTracker, ReconsolidationManager (Nader — 5min labile window), IntentDetector (9 intent types), ActivityTracker, MemoryDreamer (5-stage consolidation), MemoryChainBuilder (A*-like), MemoryCompressor (30-day min age), CrossProjectLearner (6 pattern types), AdaptiveEmbedder, SpeculativeRetriever (6 trigger types), ConsolidationScheduler
**Search (2):** Reranker, TemporalSearcher
### Memory States
- **Active** (retention ≥ 0.7) — easily retrievable
- **Dormant** (≥ 0.4) — retrievable with effort
- **Silent** (≥ 0.1) — difficult, needs cues
- **Unavailable** (< 0.1) needs reinforcement
### Connection Types
semantic, temporal, causal, spatial, part_of, user_defined — each with strength (0-1), activation_count, timestamps
---
## CognitiveEngine — 28 Modules
## Advanced Techniques
All modules persist across tool calls as stateful instances:
### Cross-Project Intelligence
The CrossProjectLearner tracks patterns across ALL projects (ErrorHandling, AsyncConcurrency, Testing, Architecture, Performance, Security). When you learn a pattern in one project that works, it becomes available in all projects. Use `codebase({ action: "get_context" })` without a codebase filter to get universal patterns.
**Neuroscience (15):** ActivationNetwork, SynapticTaggingSystem, HippocampalIndex, ContextMatcher, AccessibilityCalculator, CompetitionManager, StateUpdateService, ImportanceSignals, NoveltySignal, ArousalSignal, RewardSignal, AttentionSignal, PredictiveMemory, ProspectiveMemory, IntentionParser
### Reconsolidation Window
After any memory is accessed (via search, get, or promote), it enters a 5-minute "labile" state where modifications are enhanced. This is the optimal time to edit memories with new context. The system handles this automatically.
**Advanced (11):** ImportanceTracker, ReconsolidationManager, IntentDetector, ActivityTracker, MemoryDreamer, MemoryChainBuilder, MemoryCompressor, CrossProjectLearner, AdaptiveEmbedder, SpeculativeRetriever, ConsolidationScheduler
### Synaptic Tagging (Retroactive Importance)
Memories encoded in the last 9 hours can be retroactively promoted when something important happens. If you fix a critical bug, not only does the fix get saved — related memories from the past 9 hours also get importance boosts. The SynapticTaggingSystem handles this automatically.
**Search (2):** Reranker, TemporalSearcher
### Dream Insights
Dreams don't just consolidate — they generate new insights by cross-referencing recent memories with older knowledge. The insights can reveal: contradictions between memories, previously unseen patterns, connections across different projects. Always check dream results for `insights_generated`.
### Token Budget Strategy
Use `token_budget` on search and session_context to control response size. For quick lookups: 500. For deep context: 3000-5000. Results that don't fit go to `expandable` — retrieve them with `memory({ action: "get", id: "..." })`.
### Detail Levels
- `brief` — id/type/tags/score only (1-2 tokens per result, good for scanning)
- `summary` — 8 fields including content preview (default, balanced)
- `full` — all FSRS state, timestamps, embedding info (for debugging/analysis)
---
## Memory Hygiene
### Promote when:
- User confirms memory was helpful → `memory(action="promote")`
- Solution worked correctly
- Information was accurate
### Demote when:
- User corrects a mistake → `memory(action="demote")`
- Information was wrong
- Memory led to bad outcome
### Never save:
- Secrets, API keys, passwords
- Temporary debugging state
- Obvious/trivial information
**Promote** when user confirms helpful, solution worked, info was accurate.
**Demote** when user corrects mistake, info was wrong, led to bad outcome.
**Never save:** secrets, API keys, passwords, temporary debugging state, trivial info.
---
@ -209,12 +348,15 @@ Memory is retrieval. Searching strengthens memory. Search liberally, save aggres
## Development
- **Crate:** `vestige-mcp` v1.8.0, Rust 2024 edition, Rust 1.93.1
- **Tests:** 651 tests (313 core + 338 mcp), zero warnings
- **Build:** `cargo build --release -p vestige-mcp`
- **Features:** `embeddings` + `vector-search` (default on)
- **Architecture:** `McpServer` holds `Arc<Storage>` + `Arc<Mutex<CognitiveEngine>>`
- **Storage:** Interior mutability — `Storage` uses `Mutex<Connection>` for reader/writer split, all methods take `&self`. WAL mode for concurrent reads + writes.
- **Entry:** `src/main.rs` → stdio JSON-RPC server
- **Tools:** `src/tools/` — one file per tool, each exports `schema()` + `execute()`
- **Cognitive:** `src/cognitive.rs` — 28-field struct, initialized once at startup
- **Crate:** `vestige-mcp` v2.0.4, Rust 2024 edition, MSRV 1.91
- **Tests:** 758 (406 mcp + 352 core), zero warnings
- **Build:** `cargo build --release -p vestige-mcp` (features: `embeddings` + `vector-search`)
- **Build (no embeddings):** `cargo build --release -p vestige-mcp --no-default-features`
- **Bench:** `cargo bench -p vestige-core`
- **Architecture:** `McpServer``Arc<Storage>` + `Arc<Mutex<CognitiveEngine>>`
- **Storage:** SQLite WAL mode, `Mutex<Connection>` reader/writer split, FTS5 full-text search
- **Embeddings:** nomic-embed-text-v1.5 (768D, 8K context) via fastembed (local ONNX, no API)
- **Vector index:** USearch HNSW (20x faster than FAISS)
- **Binaries:** `vestige-mcp` (MCP server), `vestige` (CLI), `vestige-restore`
- **Dashboard:** SvelteKit 2 + Svelte 5 + Three.js + Tailwind 4, embedded at `/dashboard`
- **Env vars:** `VESTIGE_DASHBOARD_PORT` (default 3927), `VESTIGE_HTTP_PORT` (default 3928), `VESTIGE_HTTP_BIND` (default 127.0.0.1), `VESTIGE_AUTH_TOKEN` (auto-generated), `VESTIGE_CONSOLIDATION_INTERVAL_HOURS` (default 6), `RUST_LOG`

View file

@ -26,7 +26,7 @@ vestige/
### Prerequisites
- **Rust** (1.85+ stable): [rustup.rs](https://rustup.rs)
- **Rust** (1.91+ stable): [rustup.rs](https://rustup.rs)
- **Node.js** (v22+): [nodejs.org](https://nodejs.org)
- **pnpm** (v9+): `npm install -g pnpm`
@ -56,7 +56,7 @@ VESTIGE_TEST_MOCK_EMBEDDINGS=1 cargo test --workspace
## Running Tests
```bash
# All tests (734 total)
# All tests (746+ total)
VESTIGE_TEST_MOCK_EMBEDDINGS=1 cargo test --workspace
# Core library tests only (352 tests)
@ -137,7 +137,7 @@ The MCP server and dashboard. Key modules:
|--------|---------|
| `server.rs` | MCP JSON-RPC server (rmcp 0.14) |
| `cognitive.rs` | CognitiveEngine — 29 stateful modules |
| `tools/` | One file per MCP tool (21 tools) |
| `tools/` | One file per MCP tool (24 tools) |
| `dashboard/` | Axum HTTP + WebSocket + event bus |
### apps/dashboard

807
Cargo.lock generated

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@ -10,7 +10,7 @@ exclude = [
]
[workspace.package]
version = "1.9.2"
version = "2.0.9"
edition = "2024"
license = "AGPL-3.0-only"
repository = "https://github.com/samvallad33/vestige"

137
README.md
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@ -2,33 +2,82 @@
# Vestige
### The cognitive engine that gives AI a brain.
### The cognitive engine that gives AI agents a brain.
[![GitHub stars](https://img.shields.io/github/stars/samvallad33/vestige?style=social)](https://github.com/samvallad33/vestige)
[![Release](https://img.shields.io/github/v/release/samvallad33/vestige)](https://github.com/samvallad33/vestige/releases/latest)
[![Tests](https://img.shields.io/badge/tests-734%20passing-brightgreen)](https://github.com/samvallad33/vestige/actions)
[![Tests](https://img.shields.io/badge/tests-1223%20passing-brightgreen)](https://github.com/samvallad33/vestige/actions)
[![License](https://img.shields.io/badge/license-AGPL--3.0-blue)](LICENSE)
[![MCP Compatible](https://img.shields.io/badge/MCP-compatible-green)](https://modelcontextprotocol.io)
**Your AI forgets everything between sessions. Vestige fixes that.**
**Your Agent forgets everything between sessions. Vestige fixes that.**
Built on 130 years of memory research — FSRS-6 spaced repetition, prediction error gating, synaptic tagging, spreading activation, memory dreaming — all running in a single Rust binary with a 3D neural visualization dashboard. 100% local. Zero cloud.
[Quick Start](#quick-start) | [Dashboard](#-3d-memory-dashboard) | [How It Works](#-the-cognitive-science-stack) | [Tools](#-21-mcp-tools) | [Docs](docs/)
[Quick Start](#quick-start) | [Dashboard](#-3d-memory-dashboard) | [How It Works](#-the-cognitive-science-stack) | [Tools](#-24-mcp-tools) | [Docs](docs/)
</div>
---
## What's New in v2.0 "Cognitive Leap"
## What's New in v2.0.9 "Autopilot"
- **3D Memory Dashboard** — SvelteKit + Three.js neural visualization with real-time WebSocket events, bloom post-processing, force-directed graph layout. Watch your AI's mind in real-time.
- **WebSocket Event Bus** — Every cognitive operation broadcasts events: memory creation, search, dreaming, consolidation, retention decay
- **HyDE Query Expansion** — Template-based Hypothetical Document Embeddings for dramatically improved search quality on conceptual queries
- **Nomic v2 MoE Ready** — fastembed 5.11 with optional Nomic Embed Text v2 MoE (475M params, 8 experts) + Metal GPU acceleration
- **Command Palette**`Cmd+K` navigation, keyboard shortcuts, responsive mobile layout, PWA installable
- **FSRS Decay Visualization** — SVG retention curves with predicted decay at 1d/7d/30d, endangered memory alerts
- **29 cognitive modules** — 734 tests, 77,840+ LOC
Autopilot flips Vestige from passive memory library to **self-managing cognitive surface**. Same 24 MCP tools, zero schema changes — but the moment you upgrade, 14 previously dormant cognitive primitives start firing on live events without any tool call from your client.
- **One supervised backend task subscribes to the 20-event WebSocket bus** and routes six event classes into the cognitive engine: `MemoryCreated` triggers synaptic-tagging PRP + predictive-access records, `SearchPerformed` warms the speculative-retrieval model, `MemoryPromoted` fires activation spread, `MemorySuppressed` emits the Rac1 cascade wave, high-importance `ImportanceScored` (>0.85) auto-promotes, and `Heartbeat` rate-limit-fires `find_duplicates` on large DBs. **The engine mutex is never held across `.await`, so MCP dispatch is never starved.**
- **Panic-resilient supervisors.** Both background tasks run inside an outer supervisor loop — if one handler panics on a bad memory, the supervisor respawns it in 5 s instead of losing every future event.
- **Fully backward compatible.** No new MCP tools. No schema migration. Existing v2.0.8 databases open without a single step. Opt out with `VESTIGE_AUTOPILOT_ENABLED=0` if you want the passive-library contract back.
- **3,091 LOC of orphan v1.0 tool code removed** — nine superseded modules (`checkpoint`, `codebase`, `consolidate`, `ingest`, `intentions`, `knowledge`, `recall`, plus helpers) verified zero non-test callers before deletion. Tool surface unchanged.
## What's New in v2.0.8 "Pulse"
v2.0.8 wires the dashboard through to the cognitive engine. Eight new surfaces expose the reasoning stack visually — every one was MCP-only before.
- **Reasoning Theater (`/reasoning`)**`Cmd+K` Ask palette over the 8-stage `deep_reference` pipeline (hybrid retrieval → cross-encoder rerank → spreading activation → FSRS-6 trust → temporal supersession → contradiction analysis → relation assessment → template reasoning chain). Evidence cards, confidence meter, contradiction geodesic arcs, superseded-memory lineage, evolution timeline. **Zero LLM calls, 100% local.**
- **Pulse InsightToast** — real-time toasts for `DreamCompleted`, `ConsolidationCompleted`, `ConnectionDiscovered`, promote/demote/suppress/unsuppress, `Rac1CascadeSwept`. Rate-limited, auto-dismiss, click-to-dismiss.
- **Memory Birth Ritual (Terrarium)** — new memories materialize in the 3D graph on every `MemoryCreated`: elastic scale-in, quadratic Bezier flight path, glow sprite fade-in, Newton's Cradle docking recoil. 60-frame sequence, zero-alloc math.
- **7 more dashboard surfaces**`/duplicates`, `/dreams`, `/schedule`, `/importance`, `/activation`, `/contradictions`, `/patterns`. Left nav expanded 8 → 16 with single-key shortcuts.
- **Intel Mac (`x86_64-apple-darwin`) support restored** via the `ort-dynamic` Cargo feature + Homebrew `onnxruntime`. Microsoft deprecated x86_64 macOS prebuilts; the dynamic-link path sidesteps that permanently. **Closes #41.**
- **Contradiction-detection false positives eliminated** — four thresholds tightened so adjacent-domain memories no longer flag as conflicts. On an FSRS-6 query this collapses false contradictions 12 → 0 without regressing legitimate test cases.
## What's New in v2.0.7 "Visible"
Hygiene release closing two UI gaps and finishing schema cleanup. No breaking changes, no user-data migrations.
- **`POST /api/memories/{id}/suppress` + `/unsuppress` HTTP endpoints** — dashboard can trigger Anderson 2025 SIF + Rac1 cascade without dropping to raw MCP. `suppressionCount`, `retrievalPenalty`, `reversibleUntil`, `labileWindowHours` all in response. Suppress button joins Promote / Demote / Delete on the Memories page.
- **Uptime in the sidebar footer** — the `Heartbeat` event has carried `uptime_secs` since v2.0.5 but was never rendered. Now shows as `up 3d 4h` / `up 18m` / `up 47s`.
- **`execute_export` panic fix** — unreachable match arm replaced with a clean "unsupported export format" error instead of unwinding through the MCP dispatcher.
- **`predict` surfaces `predict_degraded: true`** on lock poisoning instead of silently returning empty vecs. `memory_changelog` honors `start` / `end` bounds. `intention` check honors `include_snoozed`.
- **Migration V11** — drops dead `knowledge_edges` + `compressed_memories` tables (added speculatively in V4, never used).
## What's New in v2.0.6 "Composer"
v2.0.6 is a polish release that makes the existing cognitive stack finally *feel* alive in the dashboard and stays out of your way on the prompt side.
- **Six live graph reactions, not one**`MemorySuppressed`, `MemoryUnsuppressed`, `Rac1CascadeSwept`, `Connected`, `ConsolidationStarted`, and `ImportanceScored` now light the 3D graph in real time. v2.0.5 shipped `suppress` but the graph was silent when you called it; consolidation and importance scoring have been silent since v2.0.0. No longer.
- **Intentions page actually works** — fixes a long-standing bug where every intention rendered as "normal priority" (type/schema drift between backend and frontend) and context/time triggers surfaced as raw JSON.
- **Opt-in composition mandate** — the new MCP `instructions` string stays minimal by default. Opt in to the full Composing / Never-composed / Recommendation composition protocol with `VESTIGE_SYSTEM_PROMPT_MODE=full` when you want it, and nothing is imposed on your sessions when you don't.
## What's New in v2.0.5 "Intentional Amnesia"
**The first shipped AI memory system with top-down inhibitory control over retrieval.** Other systems implement passive decay — memories fade if you don't touch them. Vestige v2.0.5 also implements *active* suppression: the new **`suppress`** tool compounds a retrieval penalty on every call (up to 80%), a background Rac1 worker fades co-activated neighbors over 72 hours, and the whole thing is reversible within a 24-hour labile window. **Never deletes.** The memory is inhibited, not erased.
Ebbinghaus 1885 models what happens to memories you don't touch. Anderson 2025 models what happens when you actively want to stop thinking about one. Every other AI memory system implements the first. Vestige is the first to ship the second.
Based on [Anderson et al. 2025](https://www.nature.com/articles/s41583-025-00929-y) (Suppression-Induced Forgetting, *Nat Rev Neurosci*) and [Cervantes-Sandoval et al. 2020](https://pmc.ncbi.nlm.nih.gov/articles/PMC7477079/) (Rac1 synaptic cascade). **24 tools · 30 cognitive modules · 1,223 tests.**
<details>
<summary>Earlier releases (v2.0 "Cognitive Leap" → v2.0.4 "Deep Reference")</summary>
- **v2.0.4 — `deep_reference` Tool** — 8-stage cognitive reasoning pipeline with FSRS-6 trust scoring, intent classification, spreading activation, contradiction analysis, and pre-built reasoning chains. Token budgets raised 10K → 100K. CORS tightened.
- **v2.0 — 3D Memory Dashboard** — SvelteKit + Three.js neural visualization with real-time WebSocket events, bloom post-processing, force-directed graph layout.
- **v2.0 — WebSocket Event Bus** — Every cognitive operation broadcasts events: memory creation, search, dreaming, consolidation, retention decay.
- **v2.0 — HyDE Query Expansion** — Template-based Hypothetical Document Embeddings for dramatically improved search quality on conceptual queries.
- **v2.0 — Nomic v2 MoE (experimental)** — fastembed 5.11 with optional Nomic Embed Text v2 MoE (475M params, 8 experts) + Metal GPU acceleration.
- **v2.0 — Command Palette**`Cmd+K` navigation, keyboard shortcuts, responsive mobile layout, PWA installable.
- **v2.0 — FSRS Decay Visualization** — SVG retention curves with predicted decay at 1d/7d/30d.
</details>
---
@ -42,6 +91,9 @@ sudo mv vestige-mcp vestige vestige-restore /usr/local/bin/
# 2. Connect to Claude Code
claude mcp add vestige vestige-mcp -s user
# Or connect to Codex
codex mcp add vestige -- /usr/local/bin/vestige-mcp
# 3. Test it
# "Remember that I prefer TypeScript over JavaScript"
# ...new session...
@ -52,26 +104,38 @@ claude mcp add vestige vestige-mcp -s user
<details>
<summary>Other platforms & install methods</summary>
**macOS (Intel):**
```bash
curl -L https://github.com/samvallad33/vestige/releases/latest/download/vestige-mcp-x86_64-apple-darwin.tar.gz | tar -xz
sudo mv vestige-mcp vestige vestige-restore /usr/local/bin/
```
**Linux (x86_64):**
```bash
curl -L https://github.com/samvallad33/vestige/releases/latest/download/vestige-mcp-x86_64-unknown-linux-gnu.tar.gz | tar -xz
sudo mv vestige-mcp vestige vestige-restore /usr/local/bin/
```
**Windows:** Download from [Releases](https://github.com/samvallad33/vestige/releases/latest)
**macOS (Intel):** Microsoft is discontinuing x86_64 macOS prebuilts after ONNX Runtime v1.23.0, so Vestige's Intel Mac build links dynamically against a Homebrew-installed ONNX Runtime via the `ort-dynamic` feature. Install with:
```bash
brew install onnxruntime
curl -L https://github.com/samvallad33/vestige/releases/latest/download/vestige-mcp-x86_64-apple-darwin.tar.gz | tar -xz
sudo mv vestige-mcp vestige vestige-restore /usr/local/bin/
echo 'export ORT_DYLIB_PATH="'"$(brew --prefix onnxruntime)"'/lib/libonnxruntime.dylib"' >> ~/.zshrc
source ~/.zshrc
claude mcp add vestige vestige-mcp -s user
```
Full Intel Mac guide (build-from-source + troubleshooting): [`docs/INSTALL-INTEL-MAC.md`](docs/INSTALL-INTEL-MAC.md).
**Windows:** Prebuilt binaries ship but `usearch 2.24.0` hit an MSVC compile break ([usearch#746](https://github.com/unum-cloud/usearch/issues/746)); we've pinned `=2.23.0` until upstream fixes it. Source builds work with:
```bash
git clone https://github.com/samvallad33/vestige && cd vestige
cargo build --release -p vestige-mcp
```
**npm:**
```bash
npm install -g vestige-mcp
npm install -g vestige-mcp-server
```
**Build from source:**
**Build from source (requires Rust 1.91+):**
```bash
git clone https://github.com/samvallad33/vestige && cd vestige
cargo build --release -p vestige-mcp
@ -89,6 +153,7 @@ Vestige speaks MCP — the universal protocol for AI tools. One brain, every IDE
| IDE | Setup |
|-----|-------|
| **Claude Code** | `claude mcp add vestige vestige-mcp -s user` |
| **Codex** | [Integration guide](docs/integrations/codex.md) |
| **Claude Desktop** | [2-min setup](docs/CONFIGURATION.md#claude-desktop-macos) |
| **Xcode 26.3** | [Integration guide](docs/integrations/xcode.md) |
| **Cursor** | [Integration guide](docs/integrations/cursor.md) |
@ -128,7 +193,7 @@ The dashboard runs automatically at `http://localhost:3927/dashboard` when the M
│ 15 REST endpoints · WS event broadcast │
├─────────────────────────────────────────────────────┤
│ MCP Server (stdio JSON-RPC) │
│ 21 tools · 29 cognitive modules │
│ 24 tools · 30 cognitive modules │
├─────────────────────────────────────────────────────┤
│ Cognitive Engine │
│ ┌──────────┐ ┌──────────┐ ┌───────────────┐ │
@ -157,6 +222,7 @@ RAG is a dumb bucket. Vestige is an active organ.
| **Storage** | Store everything | **Prediction Error Gating** — only stores what's surprising or new |
| **Retrieval** | Nearest-neighbor | **7-stage pipeline** — HyDE expansion + reranking + spreading activation |
| **Decay** | Nothing expires | **FSRS-6** — memories fade naturally, context stays lean |
| **Forgetting** *(v2.0.5)* | Delete only | **`suppress` tool** — compounding top-down inhibition, neighbor cascade, reversible 24h |
| **Duplicates** | Manual dedup | **Self-healing** — auto-merges "likes dark mode" + "prefers dark themes" |
| **Importance** | All equal | **4-channel scoring** — novelty, arousal, reward, attention |
| **Sleep** | No consolidation | **Memory dreaming** — replays, connects, synthesizes insights |
@ -188,11 +254,13 @@ This isn't a key-value store with an embedding model bolted on. Vestige implemen
**Autonomic Regulation** — Self-regulating memory health. Auto-promotes frequently accessed memories. Auto-GCs low-retention memories. Consolidation triggers on 6h staleness or 2h active use.
**Active Forgetting** *(v2.0.5)* — Top-down inhibitory control via the `suppress` tool. Other memory systems implement passive decay — the Ebbinghaus 1885 "use it or lose it" curve, sometimes with trust-weighted strength factors. Vestige v2.0.5 also implements *active* top-down suppression: each `suppress` call compounds (Suppression-Induced Forgetting, Anderson 2025), a background Rac1 cascade worker fades co-activated neighbors across the connection graph (Cervantes-Sandoval & Davis 2020), and a 24-hour labile window allows reversal (Nader reconsolidation semantics on a pragmatic axis). The memory persists — it's **inhibited, not erased**. Explicitly distinct from Anderson 1994 retrieval-induced forgetting (bottom-up, passive competition during retrieval), which is a separate, older primitive that several other memory systems implement. Based on [Anderson et al., 2025](https://www.nature.com/articles/s41583-025-00929-y) and [Cervantes-Sandoval et al., 2020](https://pmc.ncbi.nlm.nih.gov/articles/PMC7477079/). First shipped AI memory system with this primitive.
[Full science documentation ->](docs/SCIENCE.md)
---
## 🛠 21 MCP Tools
## 🛠 24 MCP Tools
### Context Packets
| Tool | What It Does |
@ -237,6 +305,17 @@ This isn't a key-value store with an embedding model bolted on. Vestige implemen
| `backup` / `export` / `gc` | Database backup, JSON export, garbage collection |
| `restore` | Restore from JSON backup |
### Deep Reference (v2.0.4)
| Tool | What It Does |
|------|-------------|
| `deep_reference` | **Cognitive reasoning across memories.** 8-stage pipeline: FSRS-6 trust scoring, intent classification, spreading activation, temporal supersession, contradiction analysis, relation assessment, dream insight integration, and algorithmic reasoning chain generation. Returns trust-scored evidence with a pre-built reasoning scaffold. |
| `cross_reference` | Backward-compatible alias for `deep_reference`. |
### Active Forgetting (v2.0.5)
| Tool | What It Does |
|------|-------------|
| `suppress` | **Top-down active forgetting** — neuroscience-grounded inhibitory control over retrieval. Distinct from `memory.delete` (destroys the row) and `memory.demote` (one-shot ranking hit). Each call **compounds** a retrieval-score penalty (Anderson 2025 SIF), and a background Rac1 cascade worker fades co-activated neighbors over 72h (Davis 2020). Reversible within a 24-hour labile window via `reverse: true`. **The memory persists** — it is inhibited, not erased. |
---
## Make Your AI Use Vestige Automatically
@ -267,8 +346,8 @@ At the start of every session:
| Metric | Value |
|--------|-------|
| **Language** | Rust 2024 edition |
| **Codebase** | 77,840+ lines, 734 tests |
| **Language** | Rust 2024 edition (MSRV 1.91) |
| **Codebase** | 80,000+ lines, 1,292 tests (366 core + 425 mcp + 497 e2e + 4 doctests) |
| **Binary size** | ~20MB |
| **Embeddings** | Nomic Embed Text v1.5 (768d → 256d Matryoshka, 8192 context) |
| **Vector search** | USearch HNSW (20x faster than FAISS) |
@ -276,9 +355,9 @@ At the start of every session:
| **Storage** | SQLite + FTS5 (optional SQLCipher encryption) |
| **Dashboard** | SvelteKit 2 + Svelte 5 + Three.js + Tailwind CSS 4 |
| **Transport** | MCP stdio (JSON-RPC 2.0) + WebSocket |
| **Cognitive modules** | 29 stateful (15 neuroscience, 12 advanced, 2 search) |
| **Cognitive modules** | 30 stateful (17 neuroscience, 11 advanced, 2 search) |
| **First run** | Downloads embedding model (~130MB), then fully offline |
| **Platforms** | macOS (ARM/Intel), Linux (x86_64), Windows |
| **Platforms** | macOS ARM + Intel + Linux x86_64 + Windows x86_64 (all prebuilt). Intel Mac needs `brew install onnxruntime` — see [install guide](docs/INSTALL-INTEL-MAC.md). |
### Optional Features
@ -321,7 +400,7 @@ vestige dashboard # Open 3D dashboard in browser
| [Storage Modes](docs/STORAGE.md) | Global, per-project, multi-instance |
| [CLAUDE.md Setup](docs/CLAUDE-SETUP.md) | Templates for proactive memory |
| [Configuration](docs/CONFIGURATION.md) | CLI commands, environment variables |
| [Integrations](docs/integrations/) | Xcode, Cursor, VS Code, JetBrains, Windsurf |
| [Integrations](docs/integrations/) | Codex, Xcode, Cursor, VS Code, JetBrains, Windsurf |
| [Changelog](CHANGELOG.md) | Version history |
---
@ -376,5 +455,5 @@ AGPL-3.0 — free to use, modify, and self-host. If you offer Vestige as a netwo
<p align="center">
<i>Built by <a href="https://github.com/samvallad33">@samvallad33</a></i><br>
<sub>77,840+ lines of Rust · 29 cognitive modules · 130 years of memory research · one 22MB binary</sub>
<sub>80,000+ lines of Rust · 30 cognitive modules · 130 years of memory research · one 22MB binary</sub>
</p>

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@ -4,8 +4,8 @@
| Version | Supported |
| ------- | ------------------ |
| 1.1.x | :white_check_mark: |
| 1.0.x | :x: |
| 2.0.x | :white_check_mark: |
| 1.x | :x: |
## Reporting a Vulnerability

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