trustgraph/trustgraph-flow/trustgraph/direct/milvus_doc_embeddings.py
cybermaggedon 89be656990
Release/v1.2 (#457)
* Bump setup.py versions for 1.1

* PoC MCP server (#419)

* Very initial MCP server PoC for TrustGraph

* Put service on port 8000

* Add MCP container and packages to buildout

* Update docs for API/CLI changes in 1.0 (#421)

* Update some API basics for the 0.23/1.0 API change

* Add MCP container push (#425)

* Add command args to the MCP server (#426)

* Host and port parameters

* Added websocket arg

* More docs

* MCP client support (#427)

- MCP client service
- Tool request/response schema
- API gateway support for mcp-tool
- Message translation for tool request & response
- Make mcp-tool using configuration service for information
  about where the MCP services are.

* Feature/react call mcp (#428)

Key Features

  - MCP Tool Integration: Added core MCP tool support with ToolClientSpec and ToolClient classes
  - API Enhancement: New mcp_tool method for flow-specific tool invocation
  - CLI Tooling: New tg-invoke-mcp-tool command for testing MCP integration
  - React Agent Enhancement: Fixed and improved multi-tool invocation capabilities
  - Tool Management: Enhanced CLI for tool configuration and management

Changes

  - Added MCP tool invocation to API with flow-specific integration
  - Implemented ToolClientSpec and ToolClient for tool call handling
  - Updated agent-manager-react to invoke MCP tools with configurable types
  - Enhanced CLI with new commands and improved help text
  - Added comprehensive documentation for new CLI commands
  - Improved tool configuration management

Testing

  - Added tg-invoke-mcp-tool CLI command for isolated MCP integration testing
  - Enhanced agent capability to invoke multiple tools simultaneously

* Test suite executed from CI pipeline (#433)

* Test strategy & test cases

* Unit tests

* Integration tests

* Extending test coverage (#434)

* Contract tests

* Testing embeedings

* Agent unit tests

* Knowledge pipeline tests

* Turn on contract tests

* Increase storage test coverage (#435)

* Fixing storage and adding tests

* PR pipeline only runs quick tests

* Empty configuration is returned as empty list, previously was not in response (#436)

* Update config util to take files as well as command-line text (#437)

* Updated CLI invocation and config model for tools and mcp (#438)

* Updated CLI invocation and config model for tools and mcp

* CLI anomalies

* Tweaked the MCP tool implementation for new model

* Update agent implementation to match the new model

* Fix agent tools, now all tested

* Fixed integration tests

* Fix MCP delete tool params

* Update Python deps to 1.2

* Update to enable knowledge extraction using the agent framework (#439)

* Implement KG extraction agent (kg-extract-agent)

* Using ReAct framework (agent-manager-react)
 
* ReAct manager had an issue when emitting JSON, which conflicts which ReAct manager's own JSON messages, so refactored ReAct manager to use traditional ReAct messages, non-JSON structure.
 
* Minor refactor to take the prompt template client out of prompt-template so it can be more readily used by other modules. kg-extract-agent uses this framework.

* Migrate from setup.py to pyproject.toml (#440)

* Converted setup.py to pyproject.toml

* Modern package infrastructure as recommended by py docs

* Install missing build deps (#441)

* Install missing build deps (#442)

* Implement logging strategy (#444)

* Logging strategy and convert all prints() to logging invocations

* Fix/startup failure (#445)

* Fix loggin startup problems

* Fix logging startup problems (#446)

* Fix logging startup problems (#447)

* Fixed Mistral OCR to use current API (#448)

* Fixed Mistral OCR to use current API

* Added PDF decoder tests

* Fix Mistral OCR ident to be standard pdf-decoder (#450)

* Fix Mistral OCR ident to be standard pdf-decoder

* Correct test

* Schema structure refactor (#451)

* Write schema refactor spec

* Implemented schema refactor spec

* Structure data mvp (#452)

* Structured data tech spec

* Architecture principles

* New schemas

* Updated schemas and specs

* Object extractor

* Add .coveragerc

* New tests

* Cassandra object storage

* Trying to object extraction working, issues exist

* Validate librarian collection (#453)

* Fix token chunker, broken API invocation (#454)

* Fix token chunker, broken API invocation (#455)

* Knowledge load utility CLI (#456)

* Knowledge loader

* More tests
2025-08-18 20:56:09 +01:00

141 lines
3.5 KiB
Python

from pymilvus import MilvusClient, CollectionSchema, FieldSchema, DataType
import time
import logging
logger = logging.getLogger(__name__)
class DocVectors:
def __init__(self, uri="http://localhost:19530", prefix='doc'):
self.client = MilvusClient(uri=uri)
# Strategy is to create collections per dimension. Probably only
# going to be using 1 anyway, but that means we don't need to
# hard-code the dimension anywhere, and no big deal if more than
# one are created.
self.collections = {}
self.prefix = prefix
# Time between reloads
self.reload_time = 90
# Next time to reload - this forces a reload at next window
self.next_reload = time.time() + self.reload_time
logger.debug(f"Reload at {self.next_reload}")
def init_collection(self, dimension):
collection_name = self.prefix + "_" + str(dimension)
pkey_field = FieldSchema(
name="id",
dtype=DataType.INT64,
is_primary=True,
auto_id=True,
)
vec_field = FieldSchema(
name="vector",
dtype=DataType.FLOAT_VECTOR,
dim=dimension,
)
doc_field = FieldSchema(
name="doc",
dtype=DataType.VARCHAR,
max_length=65535,
)
schema = CollectionSchema(
fields = [pkey_field, vec_field, doc_field],
description = "Document embedding schema",
)
self.client.create_collection(
collection_name=collection_name,
schema=schema,
metric_type="COSINE",
)
index_params = MilvusClient.prepare_index_params()
index_params.add_index(
field_name="vector",
metric_type="COSINE",
index_type="IVF_SQ8",
index_name="vector_index",
params={ "nlist": 128 }
)
self.client.create_index(
collection_name=collection_name,
index_params=index_params
)
self.collections[dimension] = collection_name
def insert(self, embeds, doc):
dim = len(embeds)
if dim not in self.collections:
self.init_collection(dim)
data = [
{
"vector": embeds,
"doc": doc,
}
]
self.client.insert(
collection_name=self.collections[dim],
data=data
)
def search(self, embeds, fields=["doc"], limit=10):
dim = len(embeds)
if dim not in self.collections:
self.init_collection(dim)
coll = self.collections[dim]
search_params = {
"metric_type": "COSINE",
"params": {
"radius": 0.1,
"range_filter": 0.8
}
}
logger.debug("Loading...")
self.client.load_collection(
collection_name=coll,
)
logger.debug("Searching...")
res = self.client.search(
collection_name=coll,
data=[embeds],
limit=limit,
output_fields=fields,
search_params=search_params,
)[0]
# If reload time has passed, unload collection
if time.time() > self.next_reload:
logger.debug(f"Unloading, reload at {self.next_reload}")
self.client.release_collection(
collection_name=coll,
)
self.next_reload = time.time() + self.reload_time
return res