Finishes the remaining EFFECT_NATIVE_REWRITE_PLAN stages in one verified slice:
- fastify, @fastify/websocket, commander, zod removed from all package manifests
- legacy @modelcontextprotocol/sdk stdio server deleted; effect/unstable/ai McpServer is canonical
- no ManagedRuntime or Effect.runPromise program facades remain in production source
- gateway server/rpc-contract and client rpc/socket moved onto Effect v4 native http/rpc/socket layers
Gates (force-run, no cache): check:tsgo, build, test (96 tests / 11 tasks) all green.
Native-class inventory: zero blocking production classes.
Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
Add the full MCP tool pipeline enabling agents to invoke external tools
(like Brave Search) via MCP servers:
- Add ToolRequest/ToolResponse types and mcp-tool topics to @trustgraph/base
- Create McpToolService (FlowProcessor) that connects to external MCP servers
via @modelcontextprotocol/sdk StreamableHTTP transport
- Add createMcpTool() to wire MCP tools into the agent's ReAct loop
- Implement config-driven tool registration in AgentService with backward-
compatible fallback to hardcoded tools
- Add tool filtering by group and state (port of Python tool_filter.py)
- Register mcp-tool in gateway dispatcher and export from @trustgraph/flow
- Fix flow restart race condition: skip restart when flow definitions unchanged
- Update seed config with MCP server config and tool definitions
- Add run scripts for MCP tool service and Brave Search MCP server
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
Add end-to-end document processing pipeline:
- PDF decoder service (pdfjs-dist) extracts text per page from librarian docs
- Ollama native LLM service for local model inference
- FalkorDB triples store FlowProcessor consumer
- Qdrant graph embeddings store FlowProcessor consumer
- Fix spec name collisions in chunker/extractor (input→chunk-input, etc.)
- Gateway /load endpoint to trigger document processing
- Align flow manager blueprint and seed config with full pipeline topics
- Add runner scripts and test coverage for document load
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
