Addresses recommendations from the UX developer's agent experience report.
Adds provenance predicates, DAG structure changes, error resilience, and
a published OWL ontology.
Explainability additions:
- Tool candidates: tg:toolCandidate on Analysis events lists the tools
visible to the LLM for each iteration (names only, descriptions in config)
- Termination reason: tg:terminationReason on Conclusion/Synthesis events
(final-answer, plan-complete, subagents-complete)
- Step counter: tg:stepNumber on iteration events
- Pattern decision: new tg:PatternDecision entity in the DAG between
session and first iteration, carrying tg:pattern and tg:taskType
- Latency: tg:llmDurationMs on Analysis events, tg:toolDurationMs on
Observation events
- Token counts on events: tg:inToken/tg:outToken/tg:llmModel on
Grounding, Focus, Synthesis, and Analysis events
- Tool/parse errors: tg:toolError on Observation events with tg:Error
mixin type. Parse failures return as error observations instead of
crashing the agent, giving it a chance to retry.
Envelope unification:
- Rename chunk_type to message_type across AgentResponse schema,
translator, SDK types, socket clients, CLI, and all tests.
Agent and RAG services now both use message_type on the wire.
Ontology:
- specs/ontology/trustgraph.ttl — OWL vocabulary covering all 26 classes,
7 object properties, and 36+ datatype properties including new predicates.
DAG structure tests:
- tests/unit/test_provenance/test_dag_structure.py verifies the
wasDerivedFrom chain for GraphRAG, DocumentRAG, and all three agent
patterns (react, plan, supervisor) including the pattern-decision link.
Refactor agent provenance so that the decision (thought + tool
selection) and the result (observation) are separate DAG entities:
Question ← Analysis+ToolUse ← Observation ← ... ← Conclusion
Analysis gains tg:ToolUse as a mixin RDF type and is emitted
before tool execution via an on_action callback in react().
This ensures sub-traces (e.g. GraphRAG) appear after their
parent Analysis in the streaming event order.
Observation becomes a standalone prov:Entity with tg:Observation
type, emitted after tool execution. The linear DAG chain runs
through Observation — subsequent iterations and the Conclusion
derive from it, not from the Analysis.
message_id is populated on streaming AgentResponse for thought
and observation chunks, using the provenance URI of the entity
being built. This lets clients group streamed chunks by entity.
Wire changes:
- provenance/agent.py: Add ToolUse type, new
agent_observation_triples(), remove observation from iteration
- agent_manager.py: Add on_action callback between reason() and
tool execution
- orchestrator/pattern_base.py: Split emit, wire message_id,
chain through observation URIs
- orchestrator/react_pattern.py: Emit Analysis via on_action
before tool runs
- agent/react/service.py: Same for non-orchestrator path
- api/explainability.py: New Observation class, updated dispatch
and chain walker
- api/types.py: Add message_id to AgentThought/AgentObservation
- cli: Render Observation separately, [analysis: tool] labels
Page and chunk document IDs were deterministic ({doc_id}/p{num},
{doc_id}/p{num}/c{num}), causing "Document already exists" errors
when reprocessing documents through different flows. Content may
differ between runs due to different parameters or extractors, so
deterministic IDs are incorrect.
Pages now use urn:page:{uuid}, chunks use
urn:chunk:{uuid}. Parent- child relationships are tracked via
librarian metadata and provenance triples.
Also brings Mistral OCR and Tesseract OCR decoders up to parity
with the PDF decoder: librarian fetch/save support, per-page
output with unique IDs, and provenance triple emission. Fixes
Mistral OCR bug where only the first 5 pages were processed.
