Commit graph

70 commits

Author SHA1 Message Date
cybermaggedon
da7d10e995
feat: add no-auth IAM regime as a drop-in replacement for iam-svc (#933)
Adds `no-auth-svc`, a lightweight IAM service that permits all access
unconditionally — no database, no bootstrap, no signing keys.  Deploy
it in place of `iam-svc` for development, demos, and single-user
setups where authentication overhead is unwanted.

The gateway no longer hard-codes a 401 on missing credentials.
Instead it asks the IAM regime via a new `authenticate-anonymous`
operation whether token-free access is allowed.  This keeps the
gateway regime-agnostic: `iam-svc` rejects anonymous auth (preserving
existing security), while `no-auth-svc` grants it with a configurable
default user and workspace.

Includes a tech spec (docs/tech-specs/no-auth-regime.md) and tests
that pin the safety boundary — malformed tokens never fall through
to the anonymous path, and a contract test ensures the full iam-svc
always rejects `authenticate-anonymous`.
2026-05-18 14:10:05 +01:00
cybermaggedon
aea4c2df8e
fix: library API get/update document round-trip bugs (#893) (#928)
Fix 5 cascading bugs in the Library API wrapper that prevented
the get_documents → update_document round-trip from working:

- Tolerate missing title field in document metadata (use .get())
- Use attribute access on Triple objects instead of subscript
- Serialize datetime to int seconds for JSON compatibility
- Handle empty server response on successful update
- Send both id and document-id keys in update request

Added library API tests
2026-05-16 11:32:51 +01:00
cybermaggedon
f0ad282708
CLI auth migration, document embeddings core lifecycle (#913)
Migrate get_kg_core and put_kg_core CLI tools to use Api/SocketClient
with first-frame auth (fixes broken raw websocket path). Fix wire
format field names (root/vector). Remove ~600 lines of dead raw
websocket code from invoke_graph_rag.py.

Add document embeddings core lifecycle to the knowledge service:
list/get/put/delete/load operations across schema, translator,
Cassandra table store, knowledge manager, gateway registry, REST API,
socket client, and CLI (tg-get-de-core, tg-put-de-core).

Fix delete_kg_core to also clean up document embeddings rows.
2026-05-14 10:30:21 +01:00
cybermaggedon
9f2bfbce0c
Per-workspace queue routing for workspace-scoped services (#862)
Workspace identity is now determined by queue infrastructure instead of
message body fields, closing a privilege-escalation vector where a caller
could spoof workspace in the request payload.

- Add WorkspaceProcessor base class: discovers workspaces from config at
  startup, creates per-workspace consumers (queue:workspace), and manages
  consumer lifecycle on workspace create/delete events
- Roll out to librarian, flow-svc, knowledge cores, and config-svc
- Config service gets a dual-queue regime: a system queue for
  cross-workspace ops (getvalues-all-ws, bootstrapper writes to
  __workspaces__) and per-workspace queues for tenant-scoped ops, with
  workspace discovery from its own Cassandra store
- Remove workspace field from request schemas (FlowRequest,
  LibrarianRequest, KnowledgeRequest, CollectionManagementRequest) and
  from DocumentMetadata / ProcessingMetadata — table stores now accept
  workspace as an explicit parameter
- Strip workspace encode/decode from all message translators and gateway
  serializers
- Gateway enforces workspace existence: reject requests targeting
  non-existent workspaces instead of routing to queues with no consumer
- Config service provisions new workspaces from __template__ on creation
- Add workspace lifecycle hooks to AsyncProcessor so any processor can
  react to workspace create/delete without subclassing WorkspaceProcessor
2026-05-04 10:30:03 +01:00
cybermaggedon
67b2fc448f
feat: IAM service, gateway auth middleware, capability model, and CLIs (#849)
Replaces the legacy GATEWAY_SECRET shared-token gate with an IAM-backed
identity and authorisation model.  The gateway no longer has an
"allow-all" or "no auth" mode; every request is authenticated via the
IAM service, authorised against a capability model that encodes both
the operation and the workspace it targets, and rejected with a
deliberately-uninformative 401 / 403 on any failure.

IAM service (trustgraph-flow/trustgraph/iam, trustgraph-base/schema/iam)
-----------------------------------------------------------------------
* New backend service (iam-svc) owning users, workspaces, API keys,
  passwords and JWT signing keys in Cassandra.  Reached over the
  standard pub/sub request/response pattern; gateway is the only
  caller.
* Operations: bootstrap, resolve-api-key, login, get-signing-key-public,
  rotate-signing-key, create/list/get/update/disable/delete/enable-user,
  change-password, reset-password, create/list/get/update/disable-
  workspace, create/list/revoke-api-key.
* Ed25519 JWT signing (alg=EdDSA).  Key rotation writes a new kid and
  retires the previous one; validation is grace-period friendly.
* Passwords: PBKDF2-HMAC-SHA-256, 600k iterations, per-user salt.
* API keys: 128-bit random, SHA-256 hashed.  Plaintext returned once.
* Bootstrap is explicit: --bootstrap-mode {token,bootstrap} is a
  required startup argument with no permissive default.  Masked
  "auth failure" errors hide whether a refused bootstrap request was
  due to mode, state, or authorisation.

Gateway authentication (trustgraph-flow/trustgraph/gateway/auth.py)
-------------------------------------------------------------------
* IamAuth replaces the legacy Authenticator.  Distinguishes JWTs
  (three-segment dotted) from API keys by shape; verifies JWTs
  locally using the cached IAM public key; resolves API keys via
  IAM with a short-TTL hash-keyed cache.  Every failure path
  surfaces the same 401 body ("auth failure") so callers cannot
  enumerate credential state.
* Public key is fetched at gateway startup with a bounded retry loop;
  traffic does not begin flowing until auth has started.

Capability model (trustgraph-flow/trustgraph/gateway/capabilities.py)
---------------------------------------------------------------------
* Roles have two dimensions: a capability set and a workspace scope.
  OSS ships reader / writer / admin; the first two are workspace-
  assigned, admin is cross-workspace ("*").  No "cross-workspace"
  pseudo-capability — workspace permission is a property of the role.
* check(identity, capability, target_workspace=None) is the single
  authorisation test: some role must grant the capability *and* be
  active in the target workspace.
* enforce_workspace validates a request-body workspace against the
  caller's role scopes and injects the resolved value.  Cross-
  workspace admin is permitted by role scope, not by a bypass.
* Gateway endpoints declare a required capability explicitly — no
  permissive default.  Construction fails fast if omitted.  Enterprise
  editions can replace the role table without changing the wire
  protocol.

WebSocket first-frame auth (dispatch/mux.py, endpoint/socket.py)
----------------------------------------------------------------
* /api/v1/socket handshake unconditionally accepts; authentication
  runs on the first WebSocket frame ({"type":"auth","token":"..."})
  with {"type":"auth-ok","workspace":"..."} / {"type":"auth-failed"}.
  The socket stays open on failure so the client can re-authenticate
  — browsers treat a handshake-time 401 as terminal, breaking
  reconnection.
* Mux.receive rejects every non-auth frame before auth succeeds,
  enforces the caller's workspace (envelope + inner payload) using
  the role-scope resolver, and supports mid-session re-auth.
* Flow import/export streaming endpoints keep the legacy ?token=
  handshake (URL-scoped short-lived transfers; no re-auth need).

Auth surface
------------
* POST /api/v1/auth/login — public, returns a JWT.
* POST /api/v1/auth/bootstrap — public; forwards to IAM's bootstrap
  op which itself enforces mode + tables-empty.
* POST /api/v1/auth/change-password — any authenticated user.
* POST /api/v1/iam — admin-only generic forwarder for the rest of
  the IAM API (per-op REST endpoints to follow in a later change).

Removed / breaking
------------------
* GATEWAY_SECRET / --api-token / default_api_token and the legacy
  Authenticator.permitted contract.  The gateway cannot run without
  IAM.
* ?token= on /api/v1/socket.
* DispatcherManager and Mux both raise on auth=None — no silent
  downgrade path.

CLI tools (trustgraph-cli)
--------------------------
tg-bootstrap-iam, tg-login, tg-create-user, tg-list-users,
tg-disable-user, tg-enable-user, tg-delete-user, tg-change-password,
tg-reset-password, tg-create-api-key, tg-list-api-keys,
tg-revoke-api-key, tg-create-workspace, tg-list-workspaces.  Passwords
read via getpass; tokens / one-time secrets written to stdout with
operator context on stderr so shell composition works cleanly.
AsyncSocketClient / SocketClient updated to the first-frame auth
protocol.

Specifications
--------------
* docs/tech-specs/iam.md updated with the error policy, workspace
  resolver extension point, and OSS role-scope model.
* docs/tech-specs/iam-protocol.md (new) — transport, dataclasses,
  operation table, error taxonomy, bootstrap modes.
* docs/tech-specs/capabilities.md (new) — capability vocabulary, OSS
  role bundles, agent-as-composition note, enforcement-boundary
  policy, enterprise extensibility.

Tests
-----
* test_auth.py (rewritten) — IamAuth + JWT round-trip with real
  Ed25519 keypairs + API-key cache behaviour.
* test_capabilities.py (new) — role table sanity, check across
  role x workspace combinations, enforce_workspace paths,
  unknown-cap / unknown-role fail-closed.
* Every endpoint test construction now names its capability
  explicitly (no permissive defaults relied upon).  New tests pin
  the fail-closed invariants: DispatcherManager / Mux refuse
  auth=None; i18n path-traversal defense is exercised.
* test_socket_graceful_shutdown rewritten against IamAuth.
2026-04-24 17:29:10 +01:00
cybermaggedon
d35473f7f7
feat: workspace-based multi-tenancy, replacing user as tenancy axis (#840)
Introduces `workspace` as the isolation boundary for config, flows,
library, and knowledge data. Removes `user` as a schema-level field
throughout the code, API specs, and tests; workspace provides the
same separation more cleanly at the trusted flow.workspace layer
rather than through client-supplied message fields.

Design
------
- IAM tech spec (docs/tech-specs/iam.md) documents current state,
  proposed auth/access model, and migration direction.
- Data ownership model (docs/tech-specs/data-ownership-model.md)
  captures the workspace/collection/flow hierarchy.

Schema + messaging
------------------
- Drop `user` field from AgentRequest/Step, GraphRagQuery,
  DocumentRagQuery, Triples/Graph/Document/Row EmbeddingsRequest,
  Sparql/Rows/Structured QueryRequest, ToolServiceRequest.
- Keep collection/workspace routing via flow.workspace at the
  service layer.
- Translators updated to not serialise/deserialise user.

API specs
---------
- OpenAPI schemas and path examples cleaned of user fields.
- Websocket async-api messages updated.
- Removed the unused parameters/User.yaml.

Services + base
---------------
- Librarian, collection manager, knowledge, config: all operations
  scoped by workspace. Config client API takes workspace as first
  positional arg.
- `flow.workspace` set at flow start time by the infrastructure;
  no longer pass-through from clients.
- Tool service drops user-personalisation passthrough.

CLI + SDK
---------
- tg-init-workspace and workspace-aware import/export.
- All tg-* commands drop user args; accept --workspace.
- Python API/SDK (flow, socket_client, async_*, explainability,
  library) drop user kwargs from every method signature.

MCP server
----------
- All tool endpoints drop user parameters; socket_manager no longer
  keyed per user.

Flow service
------------
- Closure-based topic cleanup on flow stop: only delete topics
  whose blueprint template was parameterised AND no remaining
  live flow (across all workspaces) still resolves to that topic.
  Three scopes fall out naturally from template analysis:
    * {id} -> per-flow, deleted on stop
    * {blueprint} -> per-blueprint, kept while any flow of the
      same blueprint exists
    * {workspace} -> per-workspace, kept while any flow in the
      workspace exists
    * literal -> global, never deleted (e.g. tg.request.librarian)
  Fixes a bug where stopping a flow silently destroyed the global
  librarian exchange, wedging all library operations until manual
  restart.

RabbitMQ backend
----------------
- heartbeat=60, blocked_connection_timeout=300. Catches silently
  dead connections (broker restart, orphaned channels, network
  partitions) within ~2 heartbeat windows, so the consumer
  reconnects and re-binds its queue rather than sitting forever
  on a zombie connection.

Tests
-----
- Full test refresh: unit, integration, contract, provenance.
- Dropped user-field assertions and constructor kwargs across
  ~100 test files.
- Renamed user-collection isolation tests to workspace-collection.
2026-04-21 23:23:01 +01:00
cybermaggedon
d2751553a3
Add agent explainability instrumentation and unify envelope field naming (#795)
Addresses recommendations from the UX developer's agent experience report.
Adds provenance predicates, DAG structure changes, error resilience, and
a published OWL ontology.

Explainability additions:

- Tool candidates: tg:toolCandidate on Analysis events lists the tools
  visible to the LLM for each iteration (names only, descriptions in config)
- Termination reason: tg:terminationReason on Conclusion/Synthesis events
  (final-answer, plan-complete, subagents-complete)
- Step counter: tg:stepNumber on iteration events
- Pattern decision: new tg:PatternDecision entity in the DAG between
  session and first iteration, carrying tg:pattern and tg:taskType
- Latency: tg:llmDurationMs on Analysis events, tg:toolDurationMs on
  Observation events
- Token counts on events: tg:inToken/tg:outToken/tg:llmModel on
  Grounding, Focus, Synthesis, and Analysis events
- Tool/parse errors: tg:toolError on Observation events with tg:Error
  mixin type. Parse failures return as error observations instead of
  crashing the agent, giving it a chance to retry.

Envelope unification:

- Rename chunk_type to message_type across AgentResponse schema,
  translator, SDK types, socket clients, CLI, and all tests.
  Agent and RAG services now both use message_type on the wire.

Ontology:

- specs/ontology/trustgraph.ttl — OWL vocabulary covering all 26 classes,
  7 object properties, and 36+ datatype properties including new predicates.

DAG structure tests:

- tests/unit/test_provenance/test_dag_structure.py verifies the
  wasDerivedFrom chain for GraphRAG, DocumentRAG, and all three agent
  patterns (react, plan, supervisor) including the pattern-decision link.
2026-04-13 16:16:42 +01:00
cybermaggedon
14e49d83c7
Expose LLM token usage across all service layers (#782)
Expose LLM token usage (in_token, out_token, model) across all
service layers

Propagate token counts from LLM services through the prompt,
text-completion, graph-RAG, document-RAG, and agent orchestrator
pipelines to the API gateway and Python SDK. All fields are Optional
— None means "not available", distinguishing from a real zero count.

Key changes:

- Schema: Add in_token/out_token/model to TextCompletionResponse,
  PromptResponse, GraphRagResponse, DocumentRagResponse,
  AgentResponse

- TextCompletionClient: New TextCompletionResult return type. Split
  into text_completion() (non-streaming) and
  text_completion_stream() (streaming with per-chunk handler
  callback)

- PromptClient: New PromptResult with response_type
  (text/json/jsonl), typed fields (text/object/objects), and token
  usage. All callers updated.

- RAG services: Accumulate token usage across all prompt calls
  (extract-concepts, edge-scoring, edge-reasoning,
  synthesis). Non-streaming path sends single combined response
  instead of chunk + end_of_session.

- Agent orchestrator: UsageTracker accumulates tokens across
  meta-router, pattern prompt calls, and react reasoning. Attached
  to end_of_dialog.

- Translators: Encode token fields when not None (is not None, not truthy)

- Python SDK: RAG and text-completion methods return
  TextCompletionResult (non-streaming) or RAGChunk/AgentAnswer with
  token fields (streaming)

- CLI: --show-usage flag on tg-invoke-llm, tg-invoke-prompt,
  tg-invoke-graph-rag, tg-invoke-document-rag, tg-invoke-agent
2026-04-13 14:38:34 +01:00
cybermaggedon
ddd4bd7790
Deliver explainability triples inline in retrieval response stream (#763)
Provenance triples are now included directly in explain messages from
GraphRAG, DocumentRAG, and Agent services, eliminating the need for
follow-up knowledge graph queries to retrieve explainability details.

Each explain message in the response stream now carries:
- explain_id: root URI for this provenance step (unchanged)
- explain_graph: named graph where triples are stored (unchanged)
- explain_triples: the actual provenance triples for this step (new)

Changes across the stack:
- Schema: added explain_triples field to GraphRagResponse,
  DocumentRagResponse, and AgentResponse
- Services: all explain message call sites pass triples through
  (graph_rag, document_rag, agent react, agent orchestrator)
- Translators: encode explain_triples via TripleTranslator for
  gateway wire format
- Python SDK: ProvenanceEvent now includes parsed ExplainEntity
  and raw triples; expanded event_type detection
- CLI: invoke_graph_rag, invoke_agent, invoke_document_rag use
  inline entity when available, fall back to graph query
- Tech specs updated

Additional explainability test
2026-04-07 12:19:05 +01:00
cybermaggedon
ee65d90fdd
SPARQL service supports batching/streaming (#755) 2026-04-02 17:54:07 +01:00
cybermaggedon
d9dc4cbab5
SPARQL query service (#754)
SPARQL 1.1 query service wrapping pub/sub triples interface

Add a backend-agnostic SPARQL query service that parses SPARQL
queries using rdflib, decomposes them into triple pattern lookups
via the existing TriplesClient pub/sub interface, and performs
in-memory joins, filters, and projections.

Includes:
- SPARQL parser, algebra evaluator, expression evaluator, solution
  sequence operations (BGP, JOIN, OPTIONAL, UNION, FILTER, BIND,
  VALUES, GROUP BY, ORDER BY, LIMIT/OFFSET, DISTINCT, aggregates)
- FlowProcessor service with TriplesClientSpec
- Gateway dispatcher, request/response translators, API spec
- Python SDK method (FlowInstance.sparql_query)
- CLI command (tg-invoke-sparql-query)
- Tech spec (docs/tech-specs/sparql-query.md)

New unit tests for SPARQL query
2026-04-02 17:21:39 +01:00
cybermaggedon
24f0190ce7
RabbitMQ pub/sub backend with topic exchange architecture (#752)
Adds a RabbitMQ backend as an alternative to Pulsar, selectable via
PUBSUB_BACKEND=rabbitmq. Both backends implement the same PubSubBackend
protocol — no application code changes needed to switch.

RabbitMQ topology:
- Single topic exchange per topicspace (e.g. 'tg')
- Routing key derived from queue class and topic name
- Shared consumers: named queue bound to exchange (competing, round-robin)
- Exclusive consumers: anonymous auto-delete queue (broadcast, each gets
  every message). Used by Subscriber and config push consumer.
- Thread-local producer connections (pika is not thread-safe)
- Push-based consumption via basic_consume with process_data_events
  for heartbeat processing

Consumer model changes:
- Consumer class creates one backend consumer per concurrent task
  (required for pika thread safety, harmless for Pulsar)
- Consumer class accepts consumer_type parameter
- Subscriber passes consumer_type='exclusive' for broadcast semantics
- Config push consumer uses consumer_type='exclusive' so every
  processor instance receives config updates
- handle_one_from_queue receives consumer as parameter for correct
  per-connection ack/nack

LibrarianClient:
- New shared client class replacing duplicated librarian request-response
  code across 6+ services (chunking, decoders, RAG, etc.)
- Uses stream-document instead of get-document-content for fetching
  document content in 1MB chunks (avoids broker message size limits)
- Standalone object (self.librarian = LibrarianClient(...)) not a mixin
- get-document-content marked deprecated in schema and OpenAPI spec

Serialisation:
- Extracted dataclass_to_dict/dict_to_dataclass to shared
  serialization.py (used by both Pulsar and RabbitMQ backends)

Librarian queues:
- Changed from flow class (persistent) back to request/response class
  now that stream-document eliminates large single messages
- API upload chunk size reduced from 5MB to 3MB to stay under broker
  limits after base64 encoding

Factory and CLI:
- get_pubsub() handles 'rabbitmq' backend with RabbitMQ connection params
- add_pubsub_args() includes RabbitMQ options (host, port, credentials)
- add_pubsub_args(standalone=True) defaults to localhost for CLI tools
- init_trustgraph skips Pulsar admin setup for non-Pulsar backends
- tg-dump-queues and tg-monitor-prompts use backend abstraction
- BaseClient and ConfigClient accept generic pubsub config
2026-04-02 12:47:16 +01:00
cybermaggedon
2bcf375103
Wire message_id on all answer chunks, fix DAG structure (#748)
Wire message_id on all answer chunks, fix DAG structure message_id:
- Add message_id to AgentAnswer dataclass and propagate in
  socket_client._parse_chunk
- Wire message_id into answer callbacks and send_final_response
  for all three patterns (react, plan-then-execute, supervisor)
- Supervisor decomposition thought and synthesis answer chunks
  now carry message_id

DAG structure fixes:
- Observation derives from sub-trace Synthesis (not Analysis)
  when a tool produces a sub-trace; tracked via
  last_sub_explain_uri on context
- Subagent sessions derive from parent's Decomposition via
  parent_uri on agent_session_triples
- Findings derive from subagent Conclusions (not Decomposition)
- Synthesis derives from all findings (multiple wasDerivedFrom)
  ensuring single terminal node
- agent_synthesis_triples accepts list of parent URIs
- Explainability chain walker follows from sub-trace terminal
  to find downstream Observation

Emit Analysis before tool execution:
- Add on_action callback to react() in agent_manager.py, called
  after reason() but before tool invocation
- Orchestrator and old service emit Analysis+ToolUse triples via
  on_action so sub-traces appear after their parent in the stream
2026-04-01 13:27:41 +01:00
cybermaggedon
153ae9ad30
Split Analysis into Analysis+ToolUse and Observation, add message_id (#747)
Refactor agent provenance so that the decision (thought + tool
selection) and the result (observation) are separate DAG entities:

  Question ← Analysis+ToolUse ← Observation ← ... ← Conclusion

Analysis gains tg:ToolUse as a mixin RDF type and is emitted
before tool execution via an on_action callback in react().
This ensures sub-traces (e.g. GraphRAG) appear after their
parent Analysis in the streaming event order.

Observation becomes a standalone prov:Entity with tg:Observation
type, emitted after tool execution. The linear DAG chain runs
through Observation — subsequent iterations and the Conclusion
derive from it, not from the Analysis.

message_id is populated on streaming AgentResponse for thought
and observation chunks, using the provenance URI of the entity
being built. This lets clients group streamed chunks by entity.

Wire changes:
- provenance/agent.py: Add ToolUse type, new
  agent_observation_triples(), remove observation from iteration
- agent_manager.py: Add on_action callback between reason() and
  tool execution
- orchestrator/pattern_base.py: Split emit, wire message_id,
  chain through observation URIs
- orchestrator/react_pattern.py: Emit Analysis via on_action
  before tool runs
- agent/react/service.py: Same for non-orchestrator path
- api/explainability.py: New Observation class, updated dispatch
  and chain walker
- api/types.py: Add message_id to AgentThought/AgentObservation
- cli: Render Observation separately, [analysis: tool] labels
2026-03-31 17:51:22 +01:00
cybermaggedon
89e13a756a
Minor agent-orchestrator updates (#746)
Tidy agent-orchestrator logs

Added CLI support for selecting the pattern...

  tg-invoke-agent -q "What is the document about?" -p supervisor -v
  tg-invoke-agent -q "What is the document about?" -p plan-then-execute -v
  tg-invoke-agent -q "What is the document about?" -p react -v

Added new event types to tg-show-explain-trace
2026-03-31 13:29:04 +01:00
cybermaggedon
7b734148b3
agent-orchestrator: add explainability provenance for all patterns (#744)
agent-orchestrator: add explainability provenance for all agent
patterns

Extend the provenance/explainability system to provide
human-readable reasoning traces for the orchestrator's three
agent patterns. Previously only ReAct emitted provenance
(session, iteration, conclusion). Now each pattern records its
cognitive steps as typed RDF entities in the knowledge graph,
using composable mixin types (e.g. Finding + Answer).

New provenance chains:
- Supervisor: Question → Decomposition → Finding ×N → Synthesis
- Plan-then-Execute: Question → Plan → StepResult ×N → Synthesis
- ReAct: Question → Analysis ×N → Conclusion (unchanged)

New RDF types: Decomposition, Finding, Plan, StepResult.
New predicates: tg:subagentGoal, tg:planStep.
Reuses existing Synthesis + Answer mixin for final answers.

Provenance library (trustgraph-base):
- Triple builders, URI generators, vocabulary labels for new types
- Client dataclasses with from_triples() dispatch
- fetch_agent_trace() follows branching provenance chains
- API exports updated

Orchestrator (trustgraph-flow):
- PatternBase emit methods for decomposition, finding, plan, step result, and synthesis
- SupervisorPattern emits decomposition during fan-out
- PlanThenExecutePattern emits plan and step results
- Service emits finding triples on subagent completion
- Synthesis provenance replaces generic final triples

CLI (trustgraph-cli):
- invoke_agent -x displays new entity types inline
2026-03-31 12:54:51 +01:00
cybermaggedon
849987f0e6
Add multi-pattern orchestrator with plan-then-execute and supervisor (#739)
Introduce an agent orchestrator service that supports three
execution patterns (ReAct, plan-then-execute, supervisor) with
LLM-based meta-routing to select the appropriate pattern and task
type per request. Update the agent schema to support
orchestration fields (correlation, sub-agents, plan steps) and
remove legacy response fields (answer, thought, observation).
2026-03-31 00:32:49 +01:00
cybermaggedon
9c55a0a0ff
Persistent websocket connections for socket clients and CLI tools (#723)
Replace per-request websocket connections in SocketClient and
AsyncSocketClient with a single persistent connection that
multiplexes requests by ID via a background reader task. This
eliminates repeated TCP+WS handshakes which caused significant
latency over proxies.

Convert show_flows, show_flow_blueprints, and
show_parameter_types CLI tools from sequential HTTP requests to
concurrent websocket requests using AsyncSocketClient, reducing
round trips from O(N) sequential to a small number of parallel
batches.

Also fix describe_interfaces bug in show_flows where response
queue was reading the request field instead of the response
field.
2026-03-26 16:46:28 +00:00
cybermaggedon
1a7b654bd3
Add semantic pre-filter for GraphRAG edge scoring (#702)
Embed edge descriptions and compute cosine similarity against grounding
concepts to reduce the number of edges sent to expensive LLM scoring.
Controlled by edge_score_limit parameter (default 30), skipped when edge
count is already below the limit.

Also plumbs edge_score_limit and edge_limit parameters end-to-end:
- CLI args (--edge-score-limit, --edge-limit) in both invoke and service
- Socket client: fix parameter mapping to use hyphenated wire-format keys
- Flow API, message translator, gateway all pass through correctly
- Explainable code path (_question_explainable_api) now forwards all params
- Default edge_score_limit changed from 50 to 30 based on typical subgraph
  sizes
2026-03-21 20:06:29 +00:00
cybermaggedon
c387670944
Fix incorrect property names in explainability (#698)
Remove type suffixes from explainability dataclass fields + fix show_explain_trace

Rename dataclass fields to match KG property naming conventions:
- Analysis: thought_uri/observation_uri → thought/observation
- Synthesis/Conclusion/Reflection: document_uri → document

Fix show_explain_trace for current API:
- Resolve document content via librarian fetch instead of removed
  inline content fields (synthesis.content, conclusion.answer)
- Add Grounding display for DocRAG traces
- Update fetch_docrag_trace chain: Question → Grounding → Exploration →
Synthesis
- Pass api/explain_client to all print functions for content resolution

Update all CLI tools and tests for renamed fields.
2026-03-16 14:47:37 +00:00
cybermaggedon
a115ec06ab
Enhance retrieval pipelines: 4-stage GraphRAG, DocRAG grounding (#697)
Enhance retrieval pipelines: 4-stage GraphRAG, DocRAG grounding,
consistent PROV-O

GraphRAG:
- Split retrieval into 4 prompt stages: extract-concepts,
  kg-edge-scoring,
  kg-edge-reasoning, kg-synthesis (was single-stage)
- Add concept extraction (grounding) for per-concept embedding
- Filter main query to default graph, ignoring
  provenance/explainability edges
- Add source document edges to knowledge graph

DocumentRAG:
- Add grounding step with concept extraction, matching GraphRAG's
  pattern:
  Question → Grounding → Exploration → Synthesis
- Per-concept embedding and chunk retrieval with deduplication

Cross-pipeline:
- Make PROV-O derivation links consistent: wasGeneratedBy for first
  entity from Activity, wasDerivedFrom for entity-to-entity chains
- Update CLIs (tg-invoke-agent, tg-invoke-graph-rag,
  tg-invoke-document-rag) for new explainability structure
- Fix all affected unit and integration tests
2026-03-16 12:12:13 +00:00
cybermaggedon
35128ff019
Add unified explainability support and librarian storage for (#693)
Add unified explainability support and librarian storage for all retrieval engines

Implements consistent explainability/provenance tracking
across GraphRAG, DocumentRAG, and Agent retrieval
engines. All large content (answers, thoughts, observations)
is now stored in librarian rather than as inline literals in
the knowledge graph.

Explainability API:
- New explainability.py module with entity classes (Question,
  Exploration, Focus, Synthesis, Analysis, Conclusion) and
  ExplainabilityClient
- Quiescence-based eventual consistency handling for trace
  fetching
- Content fetching from librarian with retry logic

CLI updates:
- tg-invoke-graph-rag -x/--explainable flag returns
  explain_id
- tg-invoke-document-rag -x/--explainable flag returns
  explain_id
- tg-invoke-agent -x/--explainable flag returns explain_id
- tg-list-explain-traces uses new explainability API
- tg-show-explain-trace handles all three trace types

Agent provenance:
- Records session, iterations (think/act/observe), and conclusion
- Stores thoughts and observations in librarian with document
  references
- New predicates: tg:thoughtDocument, tg:observationDocument

DocumentRAG provenance:
- Records question, exploration (chunk retrieval), and synthesis
- Stores answers in librarian with document references

Schema changes:
- AgentResponse: added explain_id, explain_graph fields
- RetrievalResponse: added explain_id, explain_graph fields
- agent_iteration_triples: supports thought_document_id,
  observation_document_id

Update tests.
2026-03-12 21:40:09 +00:00
cybermaggedon
7a6197d8c3
GraphRAG Query-Time Explainability (#677)
Implements full explainability pipeline for GraphRAG queries, enabling
traceability from answers back to source documents.

Renamed throughout for clarity:
- provenance_callback → explain_callback
- provenance_id → explain_id
- provenance_collection → explain_collection
- message_type "provenance" → "explain"
- Queue name "provenance" → "explainability"

GraphRAG queries now emit explainability events as they execute:
1. Session - query text and timestamp
2. Retrieval - edges retrieved from subgraph
3. Selection - selected edges with LLM reasoning (JSONL with id +
   reasoning)
4. Answer - reference to synthesized response

Events stream via explain_callback during query(), enabling
real-time UX.

- Answers stored in librarian service (not inline in graph - too large)
- Document ID as URN: urn:trustgraph:answer:{session_id}
- Graph stores tg:document reference (IRI) to librarian document
- Added librarian producer/consumer to graph-rag service

- get_labelgraph() now returns (labeled_edges, uri_map)
- uri_map maps edge_id(label_s, label_p, label_o) →
  (uri_s, uri_p, uri_o)
- Explainability data stores original URIs, not labels
- Enables tracing edges back to reifying statements via tg:reifies

- Added serialize_triple() to query service (matches storage format)
- get_term_value() now handles TRIPLE type terms
- Enables querying by quoted triple in object position:
  ?stmt tg:reifies <<s p o>>

- Displays real-time explainability events during query
- Resolves rdfs:label for edge components (s, p, o)
- Traces source chain via prov:wasDerivedFrom to root document
- Output: "Source: Chunk 1 → Page 2 → Document Title"
- Label caching to avoid repeated queries

GraphRagResponse:
- explain_id: str | None
- explain_collection: str | None
- message_type: str ("chunk" or "explain")
- end_of_session: bool

trustgraph-base/trustgraph/provenance/:
- namespaces.py - Added TG_DOCUMENT predicate
- triples.py - answer_triples() supports document_id reference
- uris.py - Added edge_selection_uri()

trustgraph-base/trustgraph/schema/services/retrieval.py:
- GraphRagResponse with explain_id, explain_collection, end_of_session

trustgraph-flow/trustgraph/retrieval/graph_rag/:
- graph_rag.py - URI preservation, streaming answer accumulation
- rag.py - Librarian integration, real-time explain emission

trustgraph-flow/trustgraph/query/triples/cassandra/service.py:
- Quoted triple serialization for query matching

trustgraph-cli/trustgraph/cli/invoke_graph_rag.py:
- Full explainability display with label resolution and source tracing
2026-03-10 10:00:01 +00:00
cybermaggedon
d2d71f859d
Feature/streaming triples (#676)
* Steaming triples

* Also GraphRAG service uses this

* Updated tests
2026-03-09 15:46:33 +00:00
cybermaggedon
b2ef7bbb8c
Fix doc embeddings invocation (#672)
* Fix doc embeddings invocation

* Tidy query embeddings invocation
2026-03-09 11:07:32 +00:00
cybermaggedon
f2ae0e8623
Embeddings API scores (#671)
- Put scores in all responses
- Remove unused 'middle' vector layer. Vector of texts -> vector of (vector embedding)
2026-03-09 10:53:44 +00:00
cybermaggedon
919b760c05
Update embeddings integration for new batch embeddings interfaces (#669)
* Fix vector extraction

* Fix embeddings integration
2026-03-08 19:41:52 +00:00
cybermaggedon
0a2ce47a88
Batch embeddings (#668)
Base Service (trustgraph-base/trustgraph/base/embeddings_service.py):
- Changed on_request to use request.texts

FastEmbed Processor
(trustgraph-flow/trustgraph/embeddings/fastembed/processor.py):
- on_embeddings(texts, model=None) now processes full batch efficiently
- Returns [[v.tolist()] for v in vecs] - list of vector sets

Ollama Processor (trustgraph-flow/trustgraph/embeddings/ollama/processor.py):
- on_embeddings(texts, model=None) passes list directly to Ollama
- Returns [[embedding] for embedding in embeds.embeddings]

EmbeddingsClient (trustgraph-base/trustgraph/base/embeddings_client.py):
- embed(texts, timeout=300) accepts list of texts

Tests Updated:
- test_fastembed_dynamic_model.py - 4 tests updated for new interface
- test_ollama_dynamic_model.py - 4 tests updated for new interface

Updated CLI, SDK and APIs
2026-03-08 18:36:54 +00:00
cybermaggedon
24bbe94136
Document chunks not stored in vector store (#665)
- Schema - ChunkEmbeddings now uses chunk_id: str instead of chunk: bytes
- Schema - DocumentEmbeddingsResponse now returns chunk_ids: list[str]
  instead of chunks
- Translators - Updated to serialize/deserialize chunk_id
- Clients - DocumentEmbeddingsClient.query() returns chunk_ids
- SDK/API - flow.py, socket_client.py, bulk_client.py updated
- Document embeddings service - Stores chunk_id (document ID) instead
  of chunk text
- Storage writers - Qdrant, Milvus, Pinecone store chunk_id in payload
- Query services - Return chunk_id from vector store searches
- Gateway dispatchers - Serialize chunk_id in API responses
- Document RAG - Added librarian client to fetch chunk content from
  Garage using chunk_ids
- CLI tools - Updated all three tools:
  - invoke_document_embeddings.py - displays chunk_ids, removed
    max_chunk_length
  - save_doc_embeds.py - exports chunk_id
  - load_doc_embeds.py - imports chunk_id
2026-03-07 23:10:45 +00:00
cybermaggedon
2b9232917c
Fix/extraction prov (#662)
Quoted triple fixes, including...

1. Updated triple_provenance_triples() in triples.py:
   - Now accepts a Triple object directly
   - Creates the reification triple using TRIPLE term type: stmt_uri tg:reifies
         <<extracted_triple>>
   - Includes it in the returned provenance triples
    
2. Updated definitions extractor:
   - Added imports for provenance functions and component version
   - Added ParameterSpec for optional llm-model and ontology flow parameters
   - For each definition triple, generates provenance with reification
    
3. Updated relationships extractor:
   - Same changes as definitions extractor
2026-03-06 12:23:58 +00:00
cybermaggedon
a630e143ef
Incremental / large document loading (#659)
Tech spec

BlobStore (trustgraph-flow/trustgraph/librarian/blob_store.py):
- get_stream() - yields document content in chunks for streaming retrieval
- create_multipart_upload() - initializes S3 multipart upload, returns
  upload_id
- upload_part() - uploads a single part, returns etag
- complete_multipart_upload() - finalizes upload with part etags
- abort_multipart_upload() - cancels and cleans up

Cassandra schema (trustgraph-flow/trustgraph/tables/library.py):
- New upload_session table with 24-hour TTL
- Index on user for listing sessions
- Prepared statements for all operations
- Methods: create_upload_session(), get_upload_session(),
  update_upload_session_chunk(), delete_upload_session(),
  list_upload_sessions()

- Schema extended with UploadSession, UploadProgress, and new
  request/response fields
- Librarian methods: begin_upload, upload_chunk, complete_upload,
  abort_upload, get_upload_status, list_uploads
- Service routing for all new operations
- Python SDK with transparent chunked upload:
  - add_document() auto-switches to chunked for files > 10MB
  - Progress callback support (on_progress)
  - get_pending_uploads(), get_upload_status(), abort_upload(),
    resume_upload()

- Document table: Added parent_id and document_type columns with index
- Document schema (knowledge/document.py): Added document_id field for
  streaming retrieval
- Librarian operations:
  - add-child-document for extracted PDF pages
  - list-children to get child documents
  - stream-document for chunked content retrieval
  - Cascade delete removes children when parent is deleted
  - list-documents filters children by default
- PDF decoder (decoding/pdf/pdf_decoder.py): Updated to stream large
  documents from librarian API to temp file
- Librarian service (librarian/service.py): Sends document_id instead of
  content for large PDFs (>2MB)
- Deprecated tools (load_pdf.py, load_text.py): Added deprecation
  warnings directing users to tg-add-library-document +
  tg-start-library-processing

Remove load_pdf and load_text utils

Move chunker/librarian comms to base class

Updating tests
2026-03-04 16:57:58 +00:00
cybermaggedon
4bbc6d844f
Row embeddings APIs exposed (#646)
* Added row embeddings API and CLI support

* Updated protocol specs

* Row embeddings agent tool

* Add new agent tool to CLI
2026-02-23 21:52:56 +00:00
cybermaggedon
1809c1f56d
Structured data 2 (#645)
* Structured data refactor - multi-index tables, remove need for manual mods to the Cassandra tables

* Tech spec updated to track implementation
2026-02-23 15:56:29 +00:00
cybermaggedon
b2e768c309
Fixing Uri import error (#636) 2026-02-16 19:18:40 +00:00
cybermaggedon
6bf08c3ace
Feature/more cli diags (#624)
* CLI tools for tg-invoke-graph-embeddings, tg-invoke-document-embeddings,
and tg-invoke-embeddings.  Just useful for diagnostics.

* Fix tg-load-knowledge
2026-02-04 14:10:30 +00:00
cybermaggedon
cf0daedefa
Changed schema for Value -> Term, majorly breaking change (#622)
* Changed schema for Value -> Term, majorly breaking change

* Following the schema change, Value -> Term into all processing

* Updated Cassandra for g, p, s, o index patterns (7 indexes)

* Reviewed and updated all tests

* Neo4j, Memgraph and FalkorDB remain broken, will look at once settled down
2026-01-27 13:48:08 +00:00
cybermaggedon
1c006d5b14
Python API docs (#614)
* Python API docs working

* Python API doc generation
2026-01-15 15:12:32 +00:00
cybermaggedon
b08db761d7
Fix config inconsistency (#609)
* Plural/singular confusion in config key

* Flow class vs flow blueprint nomenclature change

* Update docs & CLI to reflect the above
2026-01-14 12:31:40 +00:00
cybermaggedon
99f17d1b9d
Fix non-streaming (2) (#608) 2026-01-12 21:21:51 +00:00
cybermaggedon
807f6cc4e2
Fix non streaming RAG problems (#607)
* Fix non-streaming failure in RAG services

* Fix non-streaming failure in API

* Fix agent non-streaming messaging

* Agent messaging unit & contract tests
2026-01-12 18:45:52 +00:00
cybermaggedon
34eb083836
Messaging fabric plugins (#592)
* Plugin architecture for messaging fabric

* Schemas use a technology neutral expression

* Schemas strictness has uncovered some incorrect schema use which is fixed
2025-12-17 21:40:43 +00:00
cybermaggedon
39f6a8b940
Fix/queue configurations (#585)
* Fix config-svc startup dupe CLI args

* Fix missing params on collection service

* Fix collection management handling
2025-12-06 14:54:47 +00:00
cybermaggedon
664bce6182
Fix Python streaming SDK issues (#580)
* Fix verify CLI issues

* Fixing content mechanisms in API

* Fixing error handling

* Fixing invoke_prompt, invoke_llm, invoke_agent
2025-12-04 20:42:25 +00:00
cybermaggedon
01aeede78b
Python API implements streaming interfaces (#577)
* Tech spec

* Python CLI utilities updated to use the API including streaming features

* Added type safety to Python API

* Completed missing auth token support in CLI
2025-12-04 17:38:57 +00:00
cybermaggedon
dc2fa1f31e
flow parameters (#526)
* Flow parameter tech spec

* Flow configurable parameters implemented
2025-09-23 23:18:04 +01:00
cybermaggedon
fcd15d1833
Collection management part 2 (#522)
* Plumb collection manager into librarian

* Test end-to-end
2025-09-19 16:08:47 +01:00
cybermaggedon
13ff7d765d
Collection management (#520)
* Tech spec

* Refactored Cassanda knowledge graph for single table

* Collection management, librarian services to manage metadata and collection deletion
2025-09-18 15:57:52 +01:00
cybermaggedon
48016d8fb2
Added XML, JSON, CSV detection (#519)
* Improved XML detect, added schema selection

* Add schema select + tests

* API additions

* More tests

* Fixed tests
2025-09-16 23:53:43 +01:00
cybermaggedon
5867f45c3a
Fix/agent groups broken (#504)
* Fix non-backward-compatible agent changes

* Fix broken agents
2025-09-08 21:17:18 +01:00
cybermaggedon
f22bf13aa6
Extend use of user + collection fields (#503)
* Collection+user fields in structured query

* User/collection in structured query & agent
2025-09-08 18:28:38 +01:00