Commit graph

1341 commits

Author SHA1 Message Date
cybermaggedon
4fb0b4d8e8
Pub/sub abstraction: decouple from Pulsar (#751)
Remove Pulsar-specific concepts from application code so that
the pub/sub backend is swappable via configuration.

Rename translators:
- to_pulsar/from_pulsar → decode/encode across all translator
  classes, dispatch handlers, and tests (55+ files)
- from_response_with_completion → encode_with_completion
- Remove pulsar.schema.Record from translator base class

Queue naming (CLASS:TOPICSPACE:TOPIC):
- Replace topic() helper with queue() using new format:
  flow:tg:name, request:tg:name, response:tg:name, state:tg:name
- Queue class implies persistence/TTL (no QoS in names)
- Update Pulsar backend map_topic() to parse new format
- Librarian queues use flow class (persistent, for chunking)
- Config push uses state class (persistent, last-value)
- Remove 15 dead topic imports from schema files
- Update init_trustgraph.py namespace: config → state

Confine Pulsar to pulsar_backend.py:
- Delete legacy PulsarClient class from pubsub.py
- Move add_args to add_pubsub_args() with standalone flag
  for CLI tools (defaults to localhost)
- PulsarBackendConsumer.receive() catches _pulsar.Timeout,
  raises standard TimeoutError
- Remove Pulsar imports from: async_processor, flow_processor,
  log_level, all 11 client files, 4 storage writers, gateway
  service, gateway config receiver
- Remove log_level/LoggerLevel from client API
- Rewrite tg-monitor-prompts to use backend abstraction
- Update tg-dump-queues to use add_pubsub_args

Also: pubsub-abstraction.md tech spec covering problem statement,
design goals, as-is requirements, candidate broker assessment,
approach, and implementation order.
2026-04-01 20:16:53 +01:00
cybermaggedon
dbf8daa74a Additional agent DAG tests (#750)
- test_agent_provenance.py: test_session_parent_uri,
  test_session_no_parent_uri, and 6 synthesis tests (types,
  single/multiple parents, document, label)
- test_on_action_callback.py: 3 tests — fires before tool, skipped
  for Final, works when None
- test_callback_message_id.py: 7 tests — message_id on think/observe/
  answer callbacks (streaming + non-streaming) and
  send_final_response
- test_parse_chunk_message_id.py (5 tests) - _parse_chunk propagates
  message_id for thought, observation, answer; handles missing
  gracefully
- test_explainability_parsing.py (+1) -
  test_dispatches_analysis_with_tooluse - Analysis+ToolUse mixin still
  dispatches to Analysis
- test_explainability.py (+1) -
  test_observation_found_via_subtrace_synthesis
- chain walker follows from sub-trace Synthesis to find Observation
  and
  Conclusion in correct order
- test_agent_provenance.py (+8) - session parent_uri (2), synthesis
  single/multiple parents, types, document, label (6)
2026-04-01 13:59:58 +01:00
cybermaggedon
3ba6a3238f
Misc test harnesses (#749)
Some misc test harnesses for a few features
2026-04-01 13:52:28 +01:00
cybermaggedon
2bcf375103
Wire message_id on all answer chunks, fix DAG structure (#748)
Wire message_id on all answer chunks, fix DAG structure message_id:
- Add message_id to AgentAnswer dataclass and propagate in
  socket_client._parse_chunk
- Wire message_id into answer callbacks and send_final_response
  for all three patterns (react, plan-then-execute, supervisor)
- Supervisor decomposition thought and synthesis answer chunks
  now carry message_id

DAG structure fixes:
- Observation derives from sub-trace Synthesis (not Analysis)
  when a tool produces a sub-trace; tracked via
  last_sub_explain_uri on context
- Subagent sessions derive from parent's Decomposition via
  parent_uri on agent_session_triples
- Findings derive from subagent Conclusions (not Decomposition)
- Synthesis derives from all findings (multiple wasDerivedFrom)
  ensuring single terminal node
- agent_synthesis_triples accepts list of parent URIs
- Explainability chain walker follows from sub-trace terminal
  to find downstream Observation

Emit Analysis before tool execution:
- Add on_action callback to react() in agent_manager.py, called
  after reason() but before tool invocation
- Orchestrator and old service emit Analysis+ToolUse triples via
  on_action so sub-traces appear after their parent in the stream
2026-04-01 13:27:41 +01:00
cybermaggedon
153ae9ad30
Split Analysis into Analysis+ToolUse and Observation, add message_id (#747)
Refactor agent provenance so that the decision (thought + tool
selection) and the result (observation) are separate DAG entities:

  Question ← Analysis+ToolUse ← Observation ← ... ← Conclusion

Analysis gains tg:ToolUse as a mixin RDF type and is emitted
before tool execution via an on_action callback in react().
This ensures sub-traces (e.g. GraphRAG) appear after their
parent Analysis in the streaming event order.

Observation becomes a standalone prov:Entity with tg:Observation
type, emitted after tool execution. The linear DAG chain runs
through Observation — subsequent iterations and the Conclusion
derive from it, not from the Analysis.

message_id is populated on streaming AgentResponse for thought
and observation chunks, using the provenance URI of the entity
being built. This lets clients group streamed chunks by entity.

Wire changes:
- provenance/agent.py: Add ToolUse type, new
  agent_observation_triples(), remove observation from iteration
- agent_manager.py: Add on_action callback between reason() and
  tool execution
- orchestrator/pattern_base.py: Split emit, wire message_id,
  chain through observation URIs
- orchestrator/react_pattern.py: Emit Analysis via on_action
  before tool runs
- agent/react/service.py: Same for non-orchestrator path
- api/explainability.py: New Observation class, updated dispatch
  and chain walker
- api/types.py: Add message_id to AgentThought/AgentObservation
- cli: Render Observation separately, [analysis: tool] labels
2026-03-31 17:51:22 +01:00
cybermaggedon
89e13a756a
Minor agent-orchestrator updates (#746)
Tidy agent-orchestrator logs

Added CLI support for selecting the pattern...

  tg-invoke-agent -q "What is the document about?" -p supervisor -v
  tg-invoke-agent -q "What is the document about?" -p plan-then-execute -v
  tg-invoke-agent -q "What is the document about?" -p react -v

Added new event types to tg-show-explain-trace
2026-03-31 13:29:04 +01:00
cybermaggedon
816a8cfcf6
Update tests for agent-orchestrator (#745)
Add 96 tests covering the orchestrator's aggregation, provenance,
routing, and explainability parsing. These verify the supervisor
fan-out/fan-in lifecycle, the new RDF provenance types
(Decomposition, Finding, Plan, StepResult, Synthesis), and their
round-trip through the wire format.

Unit tests (84):
- Aggregator: register, record completion, peek, build synthesis,
  cleanup
- Provenance triple builders: types, provenance links,
  goals/steps, labels
- Explainability parsing: from_triples dispatch, field extraction
  for all new entity types, precedence over existing types
- PatternBase: is_subagent detection, emit_subagent_completion
  message shape
- Completion dispatch: detection logic, full aggregator
  integration flow, synthesis request not re-intercepted as
  completion
- MetaRouter: task type identification, pattern selection,
  valid_patterns constraints, fallback on LLM error or unknown
  response

Contract tests (12):
- Orchestration fields on AgentRequest round-trip correctly
- subagent-completion and synthesise step types in request
  history
- Plan steps with status and dependencies
- Provenance triple builder → wire format → from_triples
  round-trip for all five new entity types
2026-03-31 13:12:26 +01:00
cybermaggedon
7b734148b3
agent-orchestrator: add explainability provenance for all patterns (#744)
agent-orchestrator: add explainability provenance for all agent
patterns

Extend the provenance/explainability system to provide
human-readable reasoning traces for the orchestrator's three
agent patterns. Previously only ReAct emitted provenance
(session, iteration, conclusion). Now each pattern records its
cognitive steps as typed RDF entities in the knowledge graph,
using composable mixin types (e.g. Finding + Answer).

New provenance chains:
- Supervisor: Question → Decomposition → Finding ×N → Synthesis
- Plan-then-Execute: Question → Plan → StepResult ×N → Synthesis
- ReAct: Question → Analysis ×N → Conclusion (unchanged)

New RDF types: Decomposition, Finding, Plan, StepResult.
New predicates: tg:subagentGoal, tg:planStep.
Reuses existing Synthesis + Answer mixin for final answers.

Provenance library (trustgraph-base):
- Triple builders, URI generators, vocabulary labels for new types
- Client dataclasses with from_triples() dispatch
- fetch_agent_trace() follows branching provenance chains
- API exports updated

Orchestrator (trustgraph-flow):
- PatternBase emit methods for decomposition, finding, plan, step result, and synthesis
- SupervisorPattern emits decomposition during fan-out
- PlanThenExecutePattern emits plan and step results
- Service emits finding triples on subagent completion
- Synthesis provenance replaces generic final triples

CLI (trustgraph-cli):
- invoke_agent -x displays new entity types inline
2026-03-31 12:54:51 +01:00
cybermaggedon
e65ea217a2
agent-orchestrator improvements (#743)
agent-orchestrator improvements:
- Improve agent trace
- Improve queue dumping
- Fixing supervisor pattern
- Fix synthesis step to remove loop

Minor dev environment improvements:
- Improve queue dump output for JSON
- Reduce dev container rebuild
2026-03-31 11:24:30 +01:00
cybermaggedon
81ca7bbc11
Change monitor default to prompts-rag (#742) 2026-03-31 09:35:58 +01:00
cybermaggedon
0781d3e6a7
Remove unnecessary prompt-client logging (#740) 2026-03-31 09:12:33 +01:00
cybermaggedon
849987f0e6
Add multi-pattern orchestrator with plan-then-execute and supervisor (#739)
Introduce an agent orchestrator service that supports three
execution patterns (ReAct, plan-then-execute, supervisor) with
LLM-based meta-routing to select the appropriate pattern and task
type per request. Update the agent schema to support
orchestration fields (correlation, sub-agents, plan steps) and
remove legacy response fields (answer, thought, observation).
2026-03-31 00:32:49 +01:00
CommitHu502Craft
7af1d60db8 fix(gateway): accept raw utf-8 text in text-load (#729)
Co-authored-by: nanqinhu <139929317+nanqinhu@users.noreply.github.com>
2026-03-30 17:00:10 +01:00
cybermaggedon
5a9db2da50
Add tg-monitor-prompts CLI tool for prompt queue monitoring (#737)
Subscribes to prompt request/response Pulsar queues, correlates
messages by ID, and logs a summary with template name, truncated
terms, and elapsed time. Streaming responses are accumulated and
shown at completion. Supports prompt and prompt-rag queue types.
2026-03-30 16:08:46 +01:00
Alex Jenkins
2f484b4c15
fix deadlink in readme (#735)
Signed-off-by: Jenkins, Kenneth Alexander <kjenkins60@gatech.edu>
2026-03-29 16:51:40 -07:00
cybermaggedon
2449392896
release/v2.2 -> master (#733) 2026-03-29 20:27:25 +01:00
cybermaggedon
687a9e08fe
master -> release/v2.2 (#732) 2026-03-29 20:26:26 +01:00
cybermaggedon
413f917676 Add missing pdf extra to unstructured dependency (#728)
* Fix PDF processing deps so that PDF processing works
2026-03-29 20:22:45 +01:00
Alex Jenkins
3ed71a5620
Add security policy (#731) 2026-03-29 20:17:48 +01:00
cybermaggedon
20204d87c3
Fix OpenAI compatibility issues for newer models and Azure config (#727)
Use max_completion_tokens for OpenAI and Azure OpenAI providers:
The OpenAI API deprecated max_tokens in favor of
max_completion_tokens for chat completions. Newer models
(gpt-4o, o1, o3) reject the old parameter with a 400 error.

AZURE_API_VERSION env var now overrides the default API version:
(falls back to 2024-12-01-preview).

Update tests to test for expected structures
2026-03-28 11:19:45 +00:00
cybermaggedon
a634520509
Fix websocket error responses in Mux dispatcher (#726)
Error responses from the websocket multiplexer were missing the
request ID and using a bare string format instead of the structured
error protocol. This caused clients to hang when a request failed
(e.g. unsupported service for a flow) because the error could not
be routed to the waiting caller.

Include request ID in all error paths, use structured error format
({message, type}) with complete flag, and extract the ID early in
receive() so even malformed requests get a routable error when
possible.

Updated tests - tests were coded against invalid protocol messages
2026-03-28 10:58:28 +00:00
Jack Colquitt
060ed258eb
Add license badge to README (#725) 2026-03-27 11:28:22 -07:00
cybermaggedon
ea33620fb2
Fix missing auth header in verify_system_status (#724)
Fix missing auth header in verify_system_status processor check               
                                                                             
The check_processors function received the token parameter but                
did not include it in the Authorization header when calling the               
metrics endpoint, causing 401 errors when gateway auth is enabled.
2026-03-26 16:58:30 +00:00
cybermaggedon
9c55a0a0ff
Persistent websocket connections for socket clients and CLI tools (#723)
Replace per-request websocket connections in SocketClient and
AsyncSocketClient with a single persistent connection that
multiplexes requests by ID via a background reader task. This
eliminates repeated TCP+WS handshakes which caused significant
latency over proxies.

Convert show_flows, show_flow_blueprints, and
show_parameter_types CLI tools from sequential HTTP requests to
concurrent websocket requests using AsyncSocketClient, reducing
round trips from O(N) sequential to a small number of parallel
batches.

Also fix describe_interfaces bug in show_flows where response
queue was reading the request field instead of the response
field.
2026-03-26 16:46:28 +00:00
cybermaggedon
1ec081f42f
Update CLA notice in repo (#722) 2026-03-26 14:18:13 +00:00
Cyber MacGeddon
5702bcae1d New CLA workflow: Uses a github action in
trustgraph-ai/contributor-license-agreement

This blocks a PR until the commiter responds with a message
of agreement with the CLA terms.
2026-03-26 14:11:36 +00:00
Cyber MacGeddon
f02bbdb442 New CLA workflow: Uses a github action in
trustgraph-ai/contributor-license-agreement

This blocks a PR until the commiter responds with a message
of agreement with the CLA terms.
2026-03-26 14:09:07 +00:00
cybermaggedon
4164ef1c47
Add GATEWAY_SECRET support for MCP server to API gateway auth (#721)
Pass bearer token from GATEWAY_SECRET environment variable as a
URL query parameter on websocket connections to the API gateway.
When unset or empty, no auth is applied (backwards compatible).
2026-03-26 10:49:28 +00:00
cybermaggedon
97f5645ea0
CLA (#716)
Explanatory text for the CLA process
2026-03-26 09:08:09 +00:00
cybermaggedon
1f67fc2312
master -> release/v2.2 (#713)
Merge doc updates from master into release branch
2026-03-25 17:53:20 +00:00
cybermaggedon
3ccff800c7
Merge pull request #712 from trustgraph-ai/release/v2.2
release/v2.2 -> master
2026-03-25 17:49:19 +00:00
cybermaggedon
9330730afb
Add chunk content ID to explain trace provenance output (#708)
When --show-provenance is used with tg-show-explain-trace,
display the chunk URI on a Content: line below each Source:
chain. This allows the user to easily fetch the source text
with tg-get-document-content.
2026-03-23 16:20:52 +00:00
cybermaggedon
25995d03f4
Fix stray log messages caused by librarian messages (#706)
Warning generated by librarian responses meant for other
services (chunker, embeddings, etc.) arriving on the shared
response queue. The decoder's subscription picks them up, can't
match them to a pending request, and logs a warning.

Removed the warnings, as not serving a purpose.
2026-03-23 13:16:39 +00:00
cybermaggedon
5c6fe90fe2
Add universal document decoder with multi-format support (#705)
Add universal document decoder with multi-format support
using 'unstructured'.

New universal decoder service powered by the unstructured
library, handling DOCX, XLSX, PPTX, HTML, Markdown, CSV, RTF,
ODT, EPUB and more through a single service. Tables are preserved
as HTML markup for better downstream extraction. Images are
stored in the librarian but excluded from the text
pipeline. Configurable section grouping strategies
(whole-document, heading, element-type, count, size) for non-page
formats. Page-based formats (PDF, PPTX, XLSX) are automatically
grouped by page.

All four decoders (PDF, Mistral OCR, Tesseract OCR, universal)
now share the "document-decoder" ident so they are
interchangeable.  PDF-only decoders fetch document metadata to
check MIME type and gracefully skip unsupported formats.

Librarian changes: removed MIME type whitelist validation so any
document format can be ingested. Simplified routing so text/plain
goes to text-load and everything else goes to document-load.
Removed dual inline/streaming data paths — documents always use
document_id for content retrieval.

New provenance entity types (tg:Section, tg:Image) and metadata
predicates (tg:elementTypes, tg:tableCount, tg:imageCount) for
richer explainability.

Universal decoder is in its own package (trustgraph-unstructured)
and container image (trustgraph-unstructured).
2026-03-23 12:56:35 +00:00
cybermaggedon
4609424afe
Prepare 2.2 release branch (#704) 2026-03-22 15:23:23 +00:00
cybermaggedon
96fd1eab15
Use UUID-based URNs for page and chunk IDs (#703)
Page and chunk document IDs were deterministic ({doc_id}/p{num},
{doc_id}/p{num}/c{num}), causing "Document already exists" errors
when reprocessing documents through different flows. Content may
differ between runs due to different parameters or extractors, so
deterministic IDs are incorrect.

Pages now use urn:page:{uuid}, chunks use
urn:chunk:{uuid}. Parent- child relationships are tracked via
librarian metadata and provenance triples.

Also brings Mistral OCR and Tesseract OCR decoders up to parity
with the PDF decoder: librarian fetch/save support, per-page
output with unique IDs, and provenance triple emission. Fixes
Mistral OCR bug where only the first 5 pages were processed.
2026-03-21 21:17:03 +00:00
cybermaggedon
1a7b654bd3
Add semantic pre-filter for GraphRAG edge scoring (#702)
Embed edge descriptions and compute cosine similarity against grounding
concepts to reduce the number of edges sent to expensive LLM scoring.
Controlled by edge_score_limit parameter (default 30), skipped when edge
count is already below the limit.

Also plumbs edge_score_limit and edge_limit parameters end-to-end:
- CLI args (--edge-score-limit, --edge-limit) in both invoke and service
- Socket client: fix parameter mapping to use hyphenated wire-format keys
- Flow API, message translator, gateway all pass through correctly
- Explainable code path (_question_explainable_api) now forwards all params
- Default edge_score_limit changed from 50 to 30 based on typical subgraph
  sizes
2026-03-21 20:06:29 +00:00
Jack Colquitt
d30857b5c3
Update video links and section titles in README 2026-03-20 21:33:16 -07:00
Jack Colquitt
b8ed36401a
Update README to reflect new section and links 2026-03-20 21:17:17 -07:00
Jack Colquitt
690ca4e837
Revise README to reflect context development platform
Updated project description and platform details in README.
2026-03-19 15:51:02 -07:00
Cyber MacGeddon
3ec5e1b385 Merge branch 'release/v2.1' 2026-03-17 20:59:48 +00:00
cybermaggedon
bc68738c37
README.md from master (#701) 2026-03-17 20:54:04 +00:00
Cyber MacGeddon
c818a1fe17 Fix broken merge 2026-03-17 20:52:51 +00:00
Cyber MacGeddon
64b934c814 Fix changing the README 2026-03-17 20:51:17 +00:00
Cyber MacGeddon
824f993985 Merge branch 'release/v2.1' 2026-03-17 20:44:03 +00:00
cybermaggedon
664d1d0384
Update API specs for 2.1 (#699)
* Updating API specs for 2.1

* Updated API and SDK docs
2026-03-17 20:36:31 +00:00
cybermaggedon
c387670944
Fix incorrect property names in explainability (#698)
Remove type suffixes from explainability dataclass fields + fix show_explain_trace

Rename dataclass fields to match KG property naming conventions:
- Analysis: thought_uri/observation_uri → thought/observation
- Synthesis/Conclusion/Reflection: document_uri → document

Fix show_explain_trace for current API:
- Resolve document content via librarian fetch instead of removed
  inline content fields (synthesis.content, conclusion.answer)
- Add Grounding display for DocRAG traces
- Update fetch_docrag_trace chain: Question → Grounding → Exploration →
Synthesis
- Pass api/explain_client to all print functions for content resolution

Update all CLI tools and tests for renamed fields.
2026-03-16 14:47:37 +00:00
cybermaggedon
a115ec06ab
Enhance retrieval pipelines: 4-stage GraphRAG, DocRAG grounding (#697)
Enhance retrieval pipelines: 4-stage GraphRAG, DocRAG grounding,
consistent PROV-O

GraphRAG:
- Split retrieval into 4 prompt stages: extract-concepts,
  kg-edge-scoring,
  kg-edge-reasoning, kg-synthesis (was single-stage)
- Add concept extraction (grounding) for per-concept embedding
- Filter main query to default graph, ignoring
  provenance/explainability edges
- Add source document edges to knowledge graph

DocumentRAG:
- Add grounding step with concept extraction, matching GraphRAG's
  pattern:
  Question → Grounding → Exploration → Synthesis
- Per-concept embedding and chunk retrieval with deduplication

Cross-pipeline:
- Make PROV-O derivation links consistent: wasGeneratedBy for first
  entity from Activity, wasDerivedFrom for entity-to-entity chains
- Update CLIs (tg-invoke-agent, tg-invoke-graph-rag,
  tg-invoke-document-rag) for new explainability structure
- Fix all affected unit and integration tests
2026-03-16 12:12:13 +00:00
cybermaggedon
29b4300808
Updated test suite for explainability & provenance (#696)
* Provenance tests

* Embeddings tests

* Test librarian

* Test triples stream

* Test concurrency

* Entity centric graph writes

* Agent tool service tests

* Structured data tests

* RDF tests

* Addition LLM tests

* Reliability tests
2026-03-13 14:27:42 +00:00
cybermaggedon
e6623fc915
Remove schema:subjectOf edges from KG extraction (#695)
The subjectOf triples were redundant with the subgraph provenance model
introduced in e8407b34. Entity-to-source lineage can be traced via
tg:contains -> subgraph -> prov:wasDerivedFrom -> chunk, making the
direct subjectOf edges unnecessary metadata polluting the knowledge graph.

Removed from all three extractors (agent, definitions, relationships),
cleaned up the SUBJECT_OF constant and vocabulary label, and updated
tests accordingly.
2026-03-13 12:11:21 +00:00