mirror of
https://github.com/trustgraph-ai/trustgraph.git
synced 2026-04-28 18:06:21 +02:00
Feature/pkgsplit (#83)
* Starting to spawn base package * More package hacking * Bedrock and VertexAI * Parquet split * Updated templates * Utils
This commit is contained in:
parent
3fb75c617b
commit
9b91d5eee3
262 changed files with 630 additions and 420 deletions
0
trustgraph-flow/trustgraph/query/__init__.py
Normal file
0
trustgraph-flow/trustgraph/query/__init__.py
Normal file
|
|
@ -0,0 +1,3 @@
|
|||
|
||||
from . service import *
|
||||
|
||||
7
trustgraph-flow/trustgraph/query/doc_embeddings/milvus/__main__.py
Executable file
7
trustgraph-flow/trustgraph/query/doc_embeddings/milvus/__main__.py
Executable file
|
|
@ -0,0 +1,7 @@
|
|||
#!/usr/bin/env python3
|
||||
|
||||
from . hf import run
|
||||
|
||||
if __name__ == '__main__':
|
||||
run()
|
||||
|
||||
106
trustgraph-flow/trustgraph/query/doc_embeddings/milvus/service.py
Executable file
106
trustgraph-flow/trustgraph/query/doc_embeddings/milvus/service.py
Executable file
|
|
@ -0,0 +1,106 @@
|
|||
|
||||
"""
|
||||
Document embeddings query service. Input is vector, output is an array
|
||||
of chunks
|
||||
"""
|
||||
|
||||
from .... direct.milvus_doc_embeddings import DocVectors
|
||||
from .... schema import DocumentEmbeddingsRequest, DocumentEmbeddingsResponse
|
||||
from .... schema import Error, Value
|
||||
from .... schema import document_embeddings_request_queue
|
||||
from .... schema import document_embeddings_response_queue
|
||||
from .... base import ConsumerProducer
|
||||
|
||||
module = ".".join(__name__.split(".")[1:-1])
|
||||
|
||||
default_input_queue = document_embeddings_request_queue
|
||||
default_output_queue = document_embeddings_response_queue
|
||||
default_subscriber = module
|
||||
default_store_uri = 'http://localhost:19530'
|
||||
|
||||
class Processor(ConsumerProducer):
|
||||
|
||||
def __init__(self, **params):
|
||||
|
||||
input_queue = params.get("input_queue", default_input_queue)
|
||||
output_queue = params.get("output_queue", default_output_queue)
|
||||
subscriber = params.get("subscriber", default_subscriber)
|
||||
store_uri = params.get("store_uri", default_store_uri)
|
||||
|
||||
super(Processor, self).__init__(
|
||||
**params | {
|
||||
"input_queue": input_queue,
|
||||
"output_queue": output_queue,
|
||||
"subscriber": subscriber,
|
||||
"input_schema": DocumentEmbeddingsRequest,
|
||||
"output_schema": DocumentEmbeddingsResponse,
|
||||
"store_uri": store_uri,
|
||||
}
|
||||
)
|
||||
|
||||
self.vecstore = DocVectors(store_uri)
|
||||
|
||||
def handle(self, msg):
|
||||
|
||||
try:
|
||||
|
||||
v = msg.value()
|
||||
|
||||
# Sender-produced ID
|
||||
id = msg.properties()["id"]
|
||||
|
||||
print(f"Handling input {id}...", flush=True)
|
||||
|
||||
chunks = []
|
||||
|
||||
for vec in v.vectors:
|
||||
|
||||
resp = self.vecstore.search(vec, limit=v.limit)
|
||||
|
||||
for r in resp:
|
||||
chunk = r["entity"]["doc"]
|
||||
chunk = chunk.encode("utf-8")
|
||||
chunks.append(chunk)
|
||||
|
||||
print("Send response...", flush=True)
|
||||
r = DocumentEmbeddingsResponse(documents=chunks, error=None)
|
||||
self.producer.send(r, properties={"id": id})
|
||||
|
||||
print("Done.", flush=True)
|
||||
|
||||
except Exception as e:
|
||||
|
||||
print(f"Exception: {e}")
|
||||
|
||||
print("Send error response...", flush=True)
|
||||
|
||||
r = DocumentEmbeddingsResponse(
|
||||
error=Error(
|
||||
type = "llm-error",
|
||||
message = str(e),
|
||||
),
|
||||
documents=None,
|
||||
)
|
||||
|
||||
self.producer.send(r, properties={"id": id})
|
||||
|
||||
self.consumer.acknowledge(msg)
|
||||
|
||||
@staticmethod
|
||||
def add_args(parser):
|
||||
|
||||
ConsumerProducer.add_args(
|
||||
parser, default_input_queue, default_subscriber,
|
||||
default_output_queue,
|
||||
)
|
||||
|
||||
parser.add_argument(
|
||||
'-t', '--store-uri',
|
||||
default=default_store_uri,
|
||||
help=f'Milvus store URI (default: {default_store_uri})'
|
||||
)
|
||||
|
||||
def run():
|
||||
|
||||
Processor.start(module, __doc__)
|
||||
|
||||
|
|
@ -0,0 +1,3 @@
|
|||
|
||||
from . service import *
|
||||
|
||||
7
trustgraph-flow/trustgraph/query/doc_embeddings/qdrant/__main__.py
Executable file
7
trustgraph-flow/trustgraph/query/doc_embeddings/qdrant/__main__.py
Executable file
|
|
@ -0,0 +1,7 @@
|
|||
#!/usr/bin/env python3
|
||||
|
||||
from . hf import run
|
||||
|
||||
if __name__ == '__main__':
|
||||
run()
|
||||
|
||||
117
trustgraph-flow/trustgraph/query/doc_embeddings/qdrant/service.py
Executable file
117
trustgraph-flow/trustgraph/query/doc_embeddings/qdrant/service.py
Executable file
|
|
@ -0,0 +1,117 @@
|
|||
|
||||
"""
|
||||
Document embeddings query service. Input is vector, output is an array
|
||||
of chunks
|
||||
"""
|
||||
|
||||
from qdrant_client import QdrantClient
|
||||
from qdrant_client.models import PointStruct
|
||||
from qdrant_client.models import Distance, VectorParams
|
||||
import uuid
|
||||
|
||||
from .... schema import DocumentEmbeddingsRequest, DocumentEmbeddingsResponse
|
||||
from .... schema import Error, Value
|
||||
from .... schema import document_embeddings_request_queue
|
||||
from .... schema import document_embeddings_response_queue
|
||||
from .... base import ConsumerProducer
|
||||
|
||||
module = ".".join(__name__.split(".")[1:-1])
|
||||
|
||||
default_input_queue = document_embeddings_request_queue
|
||||
default_output_queue = document_embeddings_response_queue
|
||||
default_subscriber = module
|
||||
default_store_uri = 'http://localhost:6333'
|
||||
|
||||
class Processor(ConsumerProducer):
|
||||
|
||||
def __init__(self, **params):
|
||||
|
||||
input_queue = params.get("input_queue", default_input_queue)
|
||||
output_queue = params.get("output_queue", default_output_queue)
|
||||
subscriber = params.get("subscriber", default_subscriber)
|
||||
store_uri = params.get("store_uri", default_store_uri)
|
||||
|
||||
super(Processor, self).__init__(
|
||||
**params | {
|
||||
"input_queue": input_queue,
|
||||
"output_queue": output_queue,
|
||||
"subscriber": subscriber,
|
||||
"input_schema": DocumentEmbeddingsRequest,
|
||||
"output_schema": DocumentEmbeddingsResponse,
|
||||
"store_uri": store_uri,
|
||||
}
|
||||
)
|
||||
|
||||
self.client = QdrantClient(url=store_uri)
|
||||
|
||||
def handle(self, msg):
|
||||
|
||||
try:
|
||||
|
||||
v = msg.value()
|
||||
|
||||
# Sender-produced ID
|
||||
id = msg.properties()["id"]
|
||||
|
||||
print(f"Handling input {id}...", flush=True)
|
||||
|
||||
chunks = []
|
||||
|
||||
for vec in v.vectors:
|
||||
|
||||
dim = len(vec)
|
||||
collection = "doc_" + str(dim)
|
||||
|
||||
search_result = self.client.query_points(
|
||||
collection_name=collection,
|
||||
query=vec,
|
||||
limit=v.limit,
|
||||
with_payload=True,
|
||||
).points
|
||||
|
||||
for r in search_result:
|
||||
ent = r.payload["doc"]
|
||||
chunks.append(ent)
|
||||
|
||||
print("Send response...", flush=True)
|
||||
r = DocumentEmbeddingsResponse(documents=chunks, error=None)
|
||||
self.producer.send(r, properties={"id": id})
|
||||
|
||||
print("Done.", flush=True)
|
||||
|
||||
except Exception as e:
|
||||
|
||||
print(f"Exception: {e}")
|
||||
|
||||
print("Send error response...", flush=True)
|
||||
|
||||
r = DocumentEmbeddingsResponse(
|
||||
error=Error(
|
||||
type = "llm-error",
|
||||
message = str(e),
|
||||
),
|
||||
documents=None,
|
||||
)
|
||||
|
||||
self.producer.send(r, properties={"id": id})
|
||||
|
||||
self.consumer.acknowledge(msg)
|
||||
|
||||
@staticmethod
|
||||
def add_args(parser):
|
||||
|
||||
ConsumerProducer.add_args(
|
||||
parser, default_input_queue, default_subscriber,
|
||||
default_output_queue,
|
||||
)
|
||||
|
||||
parser.add_argument(
|
||||
'-t', '--store-uri',
|
||||
default=default_store_uri,
|
||||
help=f'Milvus store URI (default: {default_store_uri})'
|
||||
)
|
||||
|
||||
def run():
|
||||
|
||||
Processor.start(module, __doc__)
|
||||
|
||||
|
|
@ -0,0 +1,3 @@
|
|||
|
||||
from . service import *
|
||||
|
||||
7
trustgraph-flow/trustgraph/query/graph_embeddings/milvus/__main__.py
Executable file
7
trustgraph-flow/trustgraph/query/graph_embeddings/milvus/__main__.py
Executable file
|
|
@ -0,0 +1,7 @@
|
|||
#!/usr/bin/env python3
|
||||
|
||||
from . hf import run
|
||||
|
||||
if __name__ == '__main__':
|
||||
run()
|
||||
|
||||
121
trustgraph-flow/trustgraph/query/graph_embeddings/milvus/service.py
Executable file
121
trustgraph-flow/trustgraph/query/graph_embeddings/milvus/service.py
Executable file
|
|
@ -0,0 +1,121 @@
|
|||
|
||||
"""
|
||||
Graph embeddings query service. Input is vector, output is list of
|
||||
entities
|
||||
"""
|
||||
|
||||
from .... direct.milvus_graph_embeddings import EntityVectors
|
||||
from .... schema import GraphEmbeddingsRequest, GraphEmbeddingsResponse
|
||||
from .... schema import Error, Value
|
||||
from .... schema import graph_embeddings_request_queue
|
||||
from .... schema import graph_embeddings_response_queue
|
||||
from .... base import ConsumerProducer
|
||||
|
||||
module = ".".join(__name__.split(".")[1:-1])
|
||||
|
||||
default_input_queue = graph_embeddings_request_queue
|
||||
default_output_queue = graph_embeddings_response_queue
|
||||
default_subscriber = module
|
||||
default_store_uri = 'http://localhost:19530'
|
||||
|
||||
class Processor(ConsumerProducer):
|
||||
|
||||
def __init__(self, **params):
|
||||
|
||||
input_queue = params.get("input_queue", default_input_queue)
|
||||
output_queue = params.get("output_queue", default_output_queue)
|
||||
subscriber = params.get("subscriber", default_subscriber)
|
||||
store_uri = params.get("store_uri", default_store_uri)
|
||||
|
||||
super(Processor, self).__init__(
|
||||
**params | {
|
||||
"input_queue": input_queue,
|
||||
"output_queue": output_queue,
|
||||
"subscriber": subscriber,
|
||||
"input_schema": GraphEmbeddingsRequest,
|
||||
"output_schema": GraphEmbeddingsResponse,
|
||||
"store_uri": store_uri,
|
||||
}
|
||||
)
|
||||
|
||||
self.vecstore = EntityVectors(store_uri)
|
||||
|
||||
def create_value(self, ent):
|
||||
if ent.startswith("http://") or ent.startswith("https://"):
|
||||
return Value(value=ent, is_uri=True)
|
||||
else:
|
||||
return Value(value=ent, is_uri=False)
|
||||
|
||||
def handle(self, msg):
|
||||
|
||||
try:
|
||||
|
||||
v = msg.value()
|
||||
|
||||
# Sender-produced ID
|
||||
id = msg.properties()["id"]
|
||||
|
||||
print(f"Handling input {id}...", flush=True)
|
||||
|
||||
entities = set()
|
||||
|
||||
for vec in v.vectors:
|
||||
|
||||
resp = self.vecstore.search(vec, limit=v.limit)
|
||||
|
||||
for r in resp:
|
||||
ent = r["entity"]["entity"]
|
||||
entities.add(ent)
|
||||
|
||||
# Convert set to list
|
||||
entities = list(entities)
|
||||
|
||||
ents2 = []
|
||||
|
||||
for ent in entities:
|
||||
ents2.append(self.create_value(ent))
|
||||
|
||||
entities = ents2
|
||||
|
||||
print("Send response...", flush=True)
|
||||
r = GraphEmbeddingsResponse(entities=entities, error=None)
|
||||
self.producer.send(r, properties={"id": id})
|
||||
|
||||
print("Done.", flush=True)
|
||||
|
||||
except Exception as e:
|
||||
|
||||
print(f"Exception: {e}")
|
||||
|
||||
print("Send error response...", flush=True)
|
||||
|
||||
r = GraphEmbeddingsResponse(
|
||||
error=Error(
|
||||
type = "llm-error",
|
||||
message = str(e),
|
||||
),
|
||||
entities=None,
|
||||
)
|
||||
|
||||
self.producer.send(r, properties={"id": id})
|
||||
|
||||
self.consumer.acknowledge(msg)
|
||||
|
||||
@staticmethod
|
||||
def add_args(parser):
|
||||
|
||||
ConsumerProducer.add_args(
|
||||
parser, default_input_queue, default_subscriber,
|
||||
default_output_queue,
|
||||
)
|
||||
|
||||
parser.add_argument(
|
||||
'-t', '--store-uri',
|
||||
default=default_store_uri,
|
||||
help=f'Milvus store URI (default: {default_store_uri})'
|
||||
)
|
||||
|
||||
def run():
|
||||
|
||||
Processor.start(module, __doc__)
|
||||
|
||||
|
|
@ -0,0 +1,3 @@
|
|||
|
||||
from . service import *
|
||||
|
||||
7
trustgraph-flow/trustgraph/query/graph_embeddings/qdrant/__main__.py
Executable file
7
trustgraph-flow/trustgraph/query/graph_embeddings/qdrant/__main__.py
Executable file
|
|
@ -0,0 +1,7 @@
|
|||
#!/usr/bin/env python3
|
||||
|
||||
from . hf import run
|
||||
|
||||
if __name__ == '__main__':
|
||||
run()
|
||||
|
||||
133
trustgraph-flow/trustgraph/query/graph_embeddings/qdrant/service.py
Executable file
133
trustgraph-flow/trustgraph/query/graph_embeddings/qdrant/service.py
Executable file
|
|
@ -0,0 +1,133 @@
|
|||
|
||||
"""
|
||||
Graph embeddings query service. Input is vector, output is list of
|
||||
entities
|
||||
"""
|
||||
|
||||
from qdrant_client import QdrantClient
|
||||
from qdrant_client.models import PointStruct
|
||||
from qdrant_client.models import Distance, VectorParams
|
||||
import uuid
|
||||
|
||||
from .... schema import GraphEmbeddingsRequest, GraphEmbeddingsResponse
|
||||
from .... schema import Error, Value
|
||||
from .... schema import graph_embeddings_request_queue
|
||||
from .... schema import graph_embeddings_response_queue
|
||||
from .... base import ConsumerProducer
|
||||
|
||||
module = ".".join(__name__.split(".")[1:-1])
|
||||
|
||||
default_input_queue = graph_embeddings_request_queue
|
||||
default_output_queue = graph_embeddings_response_queue
|
||||
default_subscriber = module
|
||||
default_store_uri = 'http://localhost:6333'
|
||||
|
||||
class Processor(ConsumerProducer):
|
||||
|
||||
def __init__(self, **params):
|
||||
|
||||
input_queue = params.get("input_queue", default_input_queue)
|
||||
output_queue = params.get("output_queue", default_output_queue)
|
||||
subscriber = params.get("subscriber", default_subscriber)
|
||||
store_uri = params.get("store_uri", default_store_uri)
|
||||
|
||||
super(Processor, self).__init__(
|
||||
**params | {
|
||||
"input_queue": input_queue,
|
||||
"output_queue": output_queue,
|
||||
"subscriber": subscriber,
|
||||
"input_schema": GraphEmbeddingsRequest,
|
||||
"output_schema": GraphEmbeddingsResponse,
|
||||
"store_uri": store_uri,
|
||||
}
|
||||
)
|
||||
|
||||
self.client = QdrantClient(url=store_uri)
|
||||
|
||||
def create_value(self, ent):
|
||||
if ent.startswith("http://") or ent.startswith("https://"):
|
||||
return Value(value=ent, is_uri=True)
|
||||
else:
|
||||
return Value(value=ent, is_uri=False)
|
||||
|
||||
def handle(self, msg):
|
||||
|
||||
try:
|
||||
|
||||
v = msg.value()
|
||||
|
||||
# Sender-produced ID
|
||||
id = msg.properties()["id"]
|
||||
|
||||
print(f"Handling input {id}...", flush=True)
|
||||
|
||||
entities = set()
|
||||
|
||||
for vec in v.vectors:
|
||||
|
||||
dim = len(vec)
|
||||
collection = "triples_" + str(dim)
|
||||
|
||||
search_result = self.client.query_points(
|
||||
collection_name=collection,
|
||||
query=vec,
|
||||
limit=v.limit,
|
||||
with_payload=True,
|
||||
).points
|
||||
|
||||
for r in search_result:
|
||||
ent = r.payload["entity"]
|
||||
entities.add(ent)
|
||||
|
||||
# Convert set to list
|
||||
entities = list(entities)
|
||||
|
||||
ents2 = []
|
||||
|
||||
for ent in entities:
|
||||
ents2.append(self.create_value(ent))
|
||||
|
||||
entities = ents2
|
||||
|
||||
print("Send response...", flush=True)
|
||||
r = GraphEmbeddingsResponse(entities=entities, error=None)
|
||||
self.producer.send(r, properties={"id": id})
|
||||
|
||||
print("Done.", flush=True)
|
||||
|
||||
except Exception as e:
|
||||
|
||||
print(f"Exception: {e}")
|
||||
|
||||
print("Send error response...", flush=True)
|
||||
|
||||
r = GraphEmbeddingsResponse(
|
||||
error=Error(
|
||||
type = "llm-error",
|
||||
message = str(e),
|
||||
),
|
||||
entities=None,
|
||||
)
|
||||
|
||||
self.producer.send(r, properties={"id": id})
|
||||
|
||||
self.consumer.acknowledge(msg)
|
||||
|
||||
@staticmethod
|
||||
def add_args(parser):
|
||||
|
||||
ConsumerProducer.add_args(
|
||||
parser, default_input_queue, default_subscriber,
|
||||
default_output_queue,
|
||||
)
|
||||
|
||||
parser.add_argument(
|
||||
'-t', '--store-uri',
|
||||
default=default_store_uri,
|
||||
help=f'Milvus store URI (default: {default_store_uri})'
|
||||
)
|
||||
|
||||
def run():
|
||||
|
||||
Processor.start(module, __doc__)
|
||||
|
||||
0
trustgraph-flow/trustgraph/query/triples/__init__.py
Normal file
0
trustgraph-flow/trustgraph/query/triples/__init__.py
Normal file
|
|
@ -0,0 +1,3 @@
|
|||
|
||||
from . service import *
|
||||
|
||||
7
trustgraph-flow/trustgraph/query/triples/cassandra/__main__.py
Executable file
7
trustgraph-flow/trustgraph/query/triples/cassandra/__main__.py
Executable file
|
|
@ -0,0 +1,7 @@
|
|||
#!/usr/bin/env python3
|
||||
|
||||
from . hf import run
|
||||
|
||||
if __name__ == '__main__':
|
||||
run()
|
||||
|
||||
173
trustgraph-flow/trustgraph/query/triples/cassandra/service.py
Executable file
173
trustgraph-flow/trustgraph/query/triples/cassandra/service.py
Executable file
|
|
@ -0,0 +1,173 @@
|
|||
|
||||
"""
|
||||
Triples query service. Input is a (s, p, o) triple, some values may be
|
||||
null. Output is a list of triples.
|
||||
"""
|
||||
|
||||
from .... direct.cassandra import TrustGraph
|
||||
from .... schema import TriplesQueryRequest, TriplesQueryResponse, Error
|
||||
from .... schema import Value, Triple
|
||||
from .... schema import triples_request_queue
|
||||
from .... schema import triples_response_queue
|
||||
from .... base import ConsumerProducer
|
||||
|
||||
module = ".".join(__name__.split(".")[1:-1])
|
||||
|
||||
default_input_queue = triples_request_queue
|
||||
default_output_queue = triples_response_queue
|
||||
default_subscriber = module
|
||||
default_graph_host='localhost'
|
||||
|
||||
class Processor(ConsumerProducer):
|
||||
|
||||
def __init__(self, **params):
|
||||
|
||||
input_queue = params.get("input_queue", default_input_queue)
|
||||
output_queue = params.get("output_queue", default_output_queue)
|
||||
subscriber = params.get("subscriber", default_subscriber)
|
||||
graph_host = params.get("graph_host", default_graph_host)
|
||||
|
||||
super(Processor, self).__init__(
|
||||
**params | {
|
||||
"input_queue": input_queue,
|
||||
"output_queue": output_queue,
|
||||
"subscriber": subscriber,
|
||||
"input_schema": TriplesQueryRequest,
|
||||
"output_schema": TriplesQueryResponse,
|
||||
"graph_host": graph_host,
|
||||
}
|
||||
)
|
||||
|
||||
self.tg = TrustGraph([graph_host])
|
||||
|
||||
def create_value(self, ent):
|
||||
if ent.startswith("http://") or ent.startswith("https://"):
|
||||
return Value(value=ent, is_uri=True)
|
||||
else:
|
||||
return Value(value=ent, is_uri=False)
|
||||
|
||||
def handle(self, msg):
|
||||
|
||||
try:
|
||||
|
||||
v = msg.value()
|
||||
|
||||
# Sender-produced ID
|
||||
id = msg.properties()["id"]
|
||||
|
||||
print(f"Handling input {id}...", flush=True)
|
||||
|
||||
triples = []
|
||||
|
||||
if v.s is not None:
|
||||
if v.p is not None:
|
||||
if v.o is not None:
|
||||
resp = self.tg.get_spo(
|
||||
v.s.value, v.p.value, v.o.value,
|
||||
limit=v.limit
|
||||
)
|
||||
triples.append((v.s.value, v.p.value, v.o.value))
|
||||
else:
|
||||
resp = self.tg.get_sp(
|
||||
v.s.value, v.p.value,
|
||||
limit=v.limit
|
||||
)
|
||||
for t in resp:
|
||||
triples.append((v.s.value, v.p.value, t.o))
|
||||
else:
|
||||
if v.o is not None:
|
||||
resp = self.tg.get_os(
|
||||
v.o.value, v.s.value,
|
||||
limit=v.limit
|
||||
)
|
||||
for t in resp:
|
||||
triples.append((v.s.value, t.p, v.o.value))
|
||||
else:
|
||||
resp = self.tg.get_s(
|
||||
v.s.value,
|
||||
limit=v.limit
|
||||
)
|
||||
for t in resp:
|
||||
triples.append((v.s.value, t.p, t.o))
|
||||
else:
|
||||
if v.p is not None:
|
||||
if v.o is not None:
|
||||
resp = self.tg.get_po(
|
||||
v.p.value, v.o.value,
|
||||
limit=v.limit
|
||||
)
|
||||
for t in resp:
|
||||
triples.append((t.s, v.p.value, v.o.value))
|
||||
else:
|
||||
resp = self.tg.get_p(
|
||||
v.p.value,
|
||||
limit=v.limit
|
||||
)
|
||||
for t in resp:
|
||||
triples.append((t.s, v.p.value, t.o))
|
||||
else:
|
||||
if v.o is not None:
|
||||
resp = self.tg.get_o(
|
||||
v.o.value,
|
||||
limit=v.limit
|
||||
)
|
||||
for t in resp:
|
||||
triples.append((t.s, t.p, v.o.value))
|
||||
else:
|
||||
resp = self.tg.get_all(
|
||||
limit=v.limit
|
||||
)
|
||||
for t in resp:
|
||||
triples.append((t.s, t.p, t.o))
|
||||
|
||||
triples = [
|
||||
Triple(
|
||||
s=self.create_value(t[0]),
|
||||
p=self.create_value(t[1]),
|
||||
o=self.create_value(t[2])
|
||||
)
|
||||
for t in triples
|
||||
]
|
||||
|
||||
print("Send response...", flush=True)
|
||||
r = TriplesQueryResponse(triples=triples, error=None)
|
||||
self.producer.send(r, properties={"id": id})
|
||||
|
||||
print("Done.", flush=True)
|
||||
|
||||
except Exception as e:
|
||||
|
||||
print(f"Exception: {e}")
|
||||
|
||||
print("Send error response...", flush=True)
|
||||
|
||||
r = TriplesQueryResponse(
|
||||
error=Error(
|
||||
type = "llm-error",
|
||||
message = str(e),
|
||||
),
|
||||
response=None,
|
||||
)
|
||||
|
||||
self.producer.send(r, properties={"id": id})
|
||||
|
||||
self.consumer.acknowledge(msg)
|
||||
|
||||
@staticmethod
|
||||
def add_args(parser):
|
||||
|
||||
ConsumerProducer.add_args(
|
||||
parser, default_input_queue, default_subscriber,
|
||||
default_output_queue,
|
||||
)
|
||||
|
||||
parser.add_argument(
|
||||
'-g', '--graph-host',
|
||||
default="localhost",
|
||||
help=f'Graph host (default: localhost)'
|
||||
)
|
||||
|
||||
def run():
|
||||
|
||||
Processor.start(module, __doc__)
|
||||
|
||||
|
|
@ -0,0 +1,3 @@
|
|||
|
||||
from . service import *
|
||||
|
||||
7
trustgraph-flow/trustgraph/query/triples/neo4j/__main__.py
Executable file
7
trustgraph-flow/trustgraph/query/triples/neo4j/__main__.py
Executable file
|
|
@ -0,0 +1,7 @@
|
|||
#!/usr/bin/env python3
|
||||
|
||||
from . hf import run
|
||||
|
||||
if __name__ == '__main__':
|
||||
run()
|
||||
|
||||
348
trustgraph-flow/trustgraph/query/triples/neo4j/service.py
Executable file
348
trustgraph-flow/trustgraph/query/triples/neo4j/service.py
Executable file
|
|
@ -0,0 +1,348 @@
|
|||
|
||||
"""
|
||||
Triples query service. Input is a (s, p, o) triple, some values may be
|
||||
null. Output is a list of triples.
|
||||
"""
|
||||
|
||||
from neo4j import GraphDatabase
|
||||
|
||||
from .... schema import TriplesQueryRequest, TriplesQueryResponse, Error
|
||||
from .... schema import Value, Triple
|
||||
from .... schema import triples_request_queue
|
||||
from .... schema import triples_response_queue
|
||||
from .... base import ConsumerProducer
|
||||
|
||||
module = ".".join(__name__.split(".")[1:-1])
|
||||
|
||||
default_input_queue = triples_request_queue
|
||||
default_output_queue = triples_response_queue
|
||||
default_subscriber = module
|
||||
|
||||
default_graph_host = 'bolt://neo4j:7687'
|
||||
default_username = 'neo4j'
|
||||
default_password = 'password'
|
||||
|
||||
class Processor(ConsumerProducer):
|
||||
|
||||
def __init__(self, **params):
|
||||
|
||||
input_queue = params.get("input_queue", default_input_queue)
|
||||
output_queue = params.get("output_queue", default_output_queue)
|
||||
subscriber = params.get("subscriber", default_subscriber)
|
||||
graph_host = params.get("graph_host", default_graph_host)
|
||||
username = params.get("username", default_username)
|
||||
password = params.get("passowrd", default_password)
|
||||
|
||||
super(Processor, self).__init__(
|
||||
**params | {
|
||||
"input_queue": input_queue,
|
||||
"output_queue": output_queue,
|
||||
"subscriber": subscriber,
|
||||
"input_schema": TriplesQueryRequest,
|
||||
"output_schema": TriplesQueryResponse,
|
||||
"graph_host": graph_host,
|
||||
}
|
||||
)
|
||||
|
||||
self.db = "neo4j"
|
||||
|
||||
self.io = GraphDatabase.driver(graph_host, auth=(username, password))
|
||||
|
||||
def create_value(self, ent):
|
||||
|
||||
if ent.startswith("http://") or ent.startswith("https://"):
|
||||
return Value(value=ent, is_uri=True)
|
||||
else:
|
||||
return Value(value=ent, is_uri=False)
|
||||
|
||||
def handle(self, msg):
|
||||
|
||||
try:
|
||||
|
||||
v = msg.value()
|
||||
|
||||
# Sender-produced ID
|
||||
id = msg.properties()["id"]
|
||||
|
||||
print(f"Handling input {id}...", flush=True)
|
||||
|
||||
triples = []
|
||||
|
||||
if v.s is not None:
|
||||
if v.p is not None:
|
||||
if v.o is not None:
|
||||
|
||||
# SPO
|
||||
|
||||
records, summary, keys = self.io.execute_query(
|
||||
"MATCH (src:Node {uri: $src})-[rel:Rel {uri: $rel}]->(dest:Literal {value: $value}) "
|
||||
"RETURN $src as src",
|
||||
src=v.s.value, rel=v.p.value, value=v.o.value,
|
||||
database_=self.db,
|
||||
)
|
||||
|
||||
for rec in records:
|
||||
triples.append((v.s.value, v.p.value, v.o.value))
|
||||
|
||||
records, summary, keys = self.io.execute_query(
|
||||
"MATCH (src:Node {uri: $src})-[rel:Rel {uri: $rel}]->(dest:Node {uri: $uri}) "
|
||||
"RETURN $src as src",
|
||||
src=v.s.value, rel=v.p.value, uri=v.o.value,
|
||||
database_=self.db,
|
||||
)
|
||||
|
||||
for rec in records:
|
||||
triples.append((v.s.value, v.p.value, v.o.value))
|
||||
|
||||
else:
|
||||
|
||||
# SP
|
||||
|
||||
records, summary, keys = self.io.execute_query(
|
||||
"MATCH (src:Node {uri: $src})-[rel:Rel {uri: $rel}]->(dest:Literal) "
|
||||
"RETURN dest.value as dest",
|
||||
src=v.s.value, rel=v.p.value,
|
||||
database_=self.db,
|
||||
)
|
||||
|
||||
for rec in records:
|
||||
data = rec.data()
|
||||
triples.append((v.s.value, v.p.value, data["dest"]))
|
||||
|
||||
records, summary, keys = self.io.execute_query(
|
||||
"MATCH (src:Node {uri: $src})-[rel:Rel {uri: $rel}]->(dest:Node) "
|
||||
"RETURN dest.uri as dest",
|
||||
src=v.s.value, rel=v.p.value,
|
||||
database_=self.db,
|
||||
)
|
||||
|
||||
for rec in records:
|
||||
data = rec.data()
|
||||
triples.append((v.s.value, v.p.value, data["dest"]))
|
||||
|
||||
else:
|
||||
|
||||
if v.o is not None:
|
||||
|
||||
# SO
|
||||
|
||||
records, summary, keys = self.io.execute_query(
|
||||
"MATCH (src:Node {uri: $src})-[rel:Rel]->(dest:Literal {value: $value}) "
|
||||
"RETURN rel.uri as rel",
|
||||
src=v.s.value, value=v.o.value,
|
||||
database_=self.db,
|
||||
)
|
||||
|
||||
for rec in records:
|
||||
data = rec.data()
|
||||
triples.append((v.s.value, data["rel"], v.o.value))
|
||||
|
||||
records, summary, keys = self.io.execute_query(
|
||||
"MATCH (src:Node {uri: $src})-[rel:Rel]->(dest:Node {uri: $uri}) "
|
||||
"RETURN rel.uri as rel",
|
||||
src=v.s.value, uri=v.o.value,
|
||||
database_=self.db,
|
||||
)
|
||||
|
||||
for rec in records:
|
||||
data = rec.data()
|
||||
triples.append((v.s.value, data["rel"], v.o.value))
|
||||
|
||||
else:
|
||||
|
||||
# S
|
||||
|
||||
records, summary, keys = self.io.execute_query(
|
||||
"MATCH (src:Node {uri: $src})-[rel:Rel]->(dest:Literal) "
|
||||
"RETURN rel.uri as rel, dest.value as dest",
|
||||
src=v.s.value,
|
||||
database_=self.db,
|
||||
)
|
||||
|
||||
for rec in records:
|
||||
data = rec.data()
|
||||
triples.append((v.s.value, data["rel"], data["dest"]))
|
||||
|
||||
records, summary, keys = self.io.execute_query(
|
||||
"MATCH (src:Node {uri: $src})-[rel:Rel]->(dest:Node) "
|
||||
"RETURN rel.uri as rel, dest.uri as dest",
|
||||
src=v.s.value,
|
||||
database_=self.db,
|
||||
)
|
||||
|
||||
for rec in records:
|
||||
data = rec.data()
|
||||
triples.append((v.s.value, data["rel"], data["dest"]))
|
||||
|
||||
|
||||
else:
|
||||
|
||||
if v.p is not None:
|
||||
|
||||
if v.o is not None:
|
||||
|
||||
# PO
|
||||
|
||||
records, summary, keys = self.io.execute_query(
|
||||
"MATCH (src:Node)-[rel:Rel {uri: $uri}]->(dest:Literal {value: $value}) "
|
||||
"RETURN src.uri as src",
|
||||
uri=v.p.value, value=v.o.value,
|
||||
database_=self.db,
|
||||
)
|
||||
|
||||
for rec in records:
|
||||
data = rec.data()
|
||||
triples.append((data["src"], v.p.value, v.o.value))
|
||||
|
||||
records, summary, keys = self.io.execute_query(
|
||||
"MATCH (src:Node)-[rel:Rel {uri: $uri}]->(dest:Node {uri: $uri}) "
|
||||
"RETURN src.uri as src",
|
||||
uri=v.p.value, dest=v.o.value,
|
||||
database_=self.db,
|
||||
)
|
||||
|
||||
for rec in records:
|
||||
data = rec.data()
|
||||
triples.append((data["src"], v.p.value, v.o.value))
|
||||
|
||||
else:
|
||||
|
||||
# P
|
||||
|
||||
records, summary, keys = self.io.execute_query(
|
||||
"MATCH (src:Node)-[rel:Rel {uri: $uri}]->(dest:Literal) "
|
||||
"RETURN src.uri as src, dest.value as dest",
|
||||
uri=v.p.value,
|
||||
database_=self.db,
|
||||
)
|
||||
|
||||
for rec in records:
|
||||
data = rec.data()
|
||||
triples.append((data["src"], v.p.value, data["dest"]))
|
||||
|
||||
records, summary, keys = self.io.execute_query(
|
||||
"MATCH (src:Node)-[rel:Rel {uri: $uri}]->(dest:Node) "
|
||||
"RETURN src.uri as src, dest.uri as dest",
|
||||
uri=v.p.value,
|
||||
database_=self.db,
|
||||
)
|
||||
|
||||
for rec in records:
|
||||
data = rec.data()
|
||||
triples.append((data["src"], v.p.value, data["dest"]))
|
||||
|
||||
else:
|
||||
|
||||
if v.o is not None:
|
||||
|
||||
# O
|
||||
|
||||
records, summary, keys = self.io.execute_query(
|
||||
"MATCH (src:Node)-[rel:Rel]->(dest:Literal {value: $value}) "
|
||||
"RETURN src.uri as src, rel.uri as rel",
|
||||
value=v.o.value,
|
||||
database_=self.db,
|
||||
)
|
||||
|
||||
for rec in records:
|
||||
data = rec.data()
|
||||
triples.append((data["src"], data["rel"], v.o.value))
|
||||
|
||||
records, summary, keys = self.io.execute_query(
|
||||
"MATCH (src:Node)-[rel:Rel]->(dest:Node {uri: $uri}) "
|
||||
"RETURN src.uri as src, rel.uri as rel",
|
||||
uri=v.o.value,
|
||||
database_=self.db,
|
||||
)
|
||||
|
||||
for rec in records:
|
||||
data = rec.data()
|
||||
triples.append((data["src"], data["rel"], v.o.value))
|
||||
|
||||
else:
|
||||
|
||||
# *
|
||||
|
||||
records, summary, keys = self.io.execute_query(
|
||||
"MATCH (src:Node)-[rel:Rel]->(dest:Literal) "
|
||||
"RETURN src.uri as src, rel.uri as rel, dest.value as dest",
|
||||
database_=self.db,
|
||||
)
|
||||
|
||||
for rec in records:
|
||||
data = rec.data()
|
||||
triples.append((data["src"], data["rel"], data["dest"]))
|
||||
|
||||
records, summary, keys = self.io.execute_query(
|
||||
"MATCH (src:Node)-[rel:Rel]->(dest:Node) "
|
||||
"RETURN src.uri as src, rel.uri as rel, dest.uri as dest",
|
||||
database_=self.db,
|
||||
)
|
||||
|
||||
for rec in records:
|
||||
data = rec.data()
|
||||
triples.append((data["src"], data["rel"], data["dest"]))
|
||||
|
||||
triples = [
|
||||
Triple(
|
||||
s=self.create_value(t[0]),
|
||||
p=self.create_value(t[1]),
|
||||
o=self.create_value(t[2])
|
||||
)
|
||||
for t in triples
|
||||
]
|
||||
|
||||
print("Send response...", flush=True)
|
||||
r = TriplesQueryResponse(triples=triples, error=None)
|
||||
self.producer.send(r, properties={"id": id})
|
||||
|
||||
print("Done.", flush=True)
|
||||
|
||||
except Exception as e:
|
||||
|
||||
print(f"Exception: {e}")
|
||||
|
||||
print("Send error response...", flush=True)
|
||||
|
||||
r = TriplesQueryResponse(
|
||||
error=Error(
|
||||
type = "llm-error",
|
||||
message = str(e),
|
||||
),
|
||||
response=None,
|
||||
)
|
||||
|
||||
self.producer.send(r, properties={"id": id})
|
||||
|
||||
self.consumer.acknowledge(msg)
|
||||
|
||||
@staticmethod
|
||||
def add_args(parser):
|
||||
|
||||
ConsumerProducer.add_args(
|
||||
parser, default_input_queue, default_subscriber,
|
||||
default_output_queue,
|
||||
)
|
||||
|
||||
parser.add_argument(
|
||||
'-g', '--graph-host',
|
||||
default=default_graph_host,
|
||||
help=f'Graph host (default: {default_graph_host})'
|
||||
)
|
||||
|
||||
parser.add_argument(
|
||||
'--username',
|
||||
default=default_username,
|
||||
help=f'Neo4j username (default: {default_username})'
|
||||
)
|
||||
|
||||
parser.add_argument(
|
||||
'--password',
|
||||
default=default_password,
|
||||
help=f'Neo4j password (default: {default_password})'
|
||||
)
|
||||
|
||||
def run():
|
||||
|
||||
Processor.start(module, __doc__)
|
||||
|
||||
Loading…
Add table
Add a link
Reference in a new issue