Release/v1.2 (#457)

* Bump setup.py versions for 1.1

* PoC MCP server (#419)

* Very initial MCP server PoC for TrustGraph

* Put service on port 8000

* Add MCP container and packages to buildout

* Update docs for API/CLI changes in 1.0 (#421)

* Update some API basics for the 0.23/1.0 API change

* Add MCP container push (#425)

* Add command args to the MCP server (#426)

* Host and port parameters

* Added websocket arg

* More docs

* MCP client support (#427)

- MCP client service
- Tool request/response schema
- API gateway support for mcp-tool
- Message translation for tool request & response
- Make mcp-tool using configuration service for information
  about where the MCP services are.

* Feature/react call mcp (#428)

Key Features

  - MCP Tool Integration: Added core MCP tool support with ToolClientSpec and ToolClient classes
  - API Enhancement: New mcp_tool method for flow-specific tool invocation
  - CLI Tooling: New tg-invoke-mcp-tool command for testing MCP integration
  - React Agent Enhancement: Fixed and improved multi-tool invocation capabilities
  - Tool Management: Enhanced CLI for tool configuration and management

Changes

  - Added MCP tool invocation to API with flow-specific integration
  - Implemented ToolClientSpec and ToolClient for tool call handling
  - Updated agent-manager-react to invoke MCP tools with configurable types
  - Enhanced CLI with new commands and improved help text
  - Added comprehensive documentation for new CLI commands
  - Improved tool configuration management

Testing

  - Added tg-invoke-mcp-tool CLI command for isolated MCP integration testing
  - Enhanced agent capability to invoke multiple tools simultaneously

* Test suite executed from CI pipeline (#433)

* Test strategy & test cases

* Unit tests

* Integration tests

* Extending test coverage (#434)

* Contract tests

* Testing embeedings

* Agent unit tests

* Knowledge pipeline tests

* Turn on contract tests

* Increase storage test coverage (#435)

* Fixing storage and adding tests

* PR pipeline only runs quick tests

* Empty configuration is returned as empty list, previously was not in response (#436)

* Update config util to take files as well as command-line text (#437)

* Updated CLI invocation and config model for tools and mcp (#438)

* Updated CLI invocation and config model for tools and mcp

* CLI anomalies

* Tweaked the MCP tool implementation for new model

* Update agent implementation to match the new model

* Fix agent tools, now all tested

* Fixed integration tests

* Fix MCP delete tool params

* Update Python deps to 1.2

* Update to enable knowledge extraction using the agent framework (#439)

* Implement KG extraction agent (kg-extract-agent)

* Using ReAct framework (agent-manager-react)
 
* ReAct manager had an issue when emitting JSON, which conflicts which ReAct manager's own JSON messages, so refactored ReAct manager to use traditional ReAct messages, non-JSON structure.
 
* Minor refactor to take the prompt template client out of prompt-template so it can be more readily used by other modules. kg-extract-agent uses this framework.

* Migrate from setup.py to pyproject.toml (#440)

* Converted setup.py to pyproject.toml

* Modern package infrastructure as recommended by py docs

* Install missing build deps (#441)

* Install missing build deps (#442)

* Implement logging strategy (#444)

* Logging strategy and convert all prints() to logging invocations

* Fix/startup failure (#445)

* Fix loggin startup problems

* Fix logging startup problems (#446)

* Fix logging startup problems (#447)

* Fixed Mistral OCR to use current API (#448)

* Fixed Mistral OCR to use current API

* Added PDF decoder tests

* Fix Mistral OCR ident to be standard pdf-decoder (#450)

* Fix Mistral OCR ident to be standard pdf-decoder

* Correct test

* Schema structure refactor (#451)

* Write schema refactor spec

* Implemented schema refactor spec

* Structure data mvp (#452)

* Structured data tech spec

* Architecture principles

* New schemas

* Updated schemas and specs

* Object extractor

* Add .coveragerc

* New tests

* Cassandra object storage

* Trying to object extraction working, issues exist

* Validate librarian collection (#453)

* Fix token chunker, broken API invocation (#454)

* Fix token chunker, broken API invocation (#455)

* Knowledge load utility CLI (#456)

* Knowledge loader

* More tests
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commit 89be656990
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509 changed files with 49632 additions and 5159 deletions

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@ -0,0 +1,148 @@
"""
Shared fixtures for query tests
"""
import pytest
from unittest.mock import AsyncMock, MagicMock
@pytest.fixture
def base_query_config():
"""Base configuration for query processors"""
return {
'taskgroup': AsyncMock(),
'id': 'test-query-processor'
}
@pytest.fixture
def qdrant_query_config(base_query_config):
"""Configuration for Qdrant query processors"""
return base_query_config | {
'store_uri': 'http://localhost:6333',
'api_key': 'test-api-key'
}
@pytest.fixture
def mock_qdrant_client():
"""Mock Qdrant client"""
mock_client = MagicMock()
mock_client.query_points.return_value = []
return mock_client
# Graph embeddings query fixtures
@pytest.fixture
def mock_graph_embeddings_request():
"""Mock graph embeddings request message"""
mock_message = MagicMock()
mock_message.vectors = [[0.1, 0.2, 0.3]]
mock_message.limit = 5
mock_message.user = 'test_user'
mock_message.collection = 'test_collection'
return mock_message
@pytest.fixture
def mock_graph_embeddings_multiple_vectors():
"""Mock graph embeddings request with multiple vectors"""
mock_message = MagicMock()
mock_message.vectors = [[0.1, 0.2], [0.3, 0.4]]
mock_message.limit = 3
mock_message.user = 'multi_user'
mock_message.collection = 'multi_collection'
return mock_message
@pytest.fixture
def mock_graph_embeddings_query_response():
"""Mock graph embeddings query response from Qdrant"""
mock_point1 = MagicMock()
mock_point1.payload = {'entity': 'entity1'}
mock_point2 = MagicMock()
mock_point2.payload = {'entity': 'entity2'}
return [mock_point1, mock_point2]
@pytest.fixture
def mock_graph_embeddings_uri_response():
"""Mock graph embeddings query response with URIs"""
mock_point1 = MagicMock()
mock_point1.payload = {'entity': 'http://example.com/entity1'}
mock_point2 = MagicMock()
mock_point2.payload = {'entity': 'https://secure.example.com/entity2'}
mock_point3 = MagicMock()
mock_point3.payload = {'entity': 'regular entity'}
return [mock_point1, mock_point2, mock_point3]
# Document embeddings query fixtures
@pytest.fixture
def mock_document_embeddings_request():
"""Mock document embeddings request message"""
mock_message = MagicMock()
mock_message.vectors = [[0.1, 0.2, 0.3]]
mock_message.limit = 5
mock_message.user = 'test_user'
mock_message.collection = 'test_collection'
return mock_message
@pytest.fixture
def mock_document_embeddings_multiple_vectors():
"""Mock document embeddings request with multiple vectors"""
mock_message = MagicMock()
mock_message.vectors = [[0.1, 0.2], [0.3, 0.4]]
mock_message.limit = 3
mock_message.user = 'multi_user'
mock_message.collection = 'multi_collection'
return mock_message
@pytest.fixture
def mock_document_embeddings_query_response():
"""Mock document embeddings query response from Qdrant"""
mock_point1 = MagicMock()
mock_point1.payload = {'doc': 'first document chunk'}
mock_point2 = MagicMock()
mock_point2.payload = {'doc': 'second document chunk'}
return [mock_point1, mock_point2]
@pytest.fixture
def mock_document_embeddings_utf8_response():
"""Mock document embeddings query response with UTF-8 content"""
mock_point1 = MagicMock()
mock_point1.payload = {'doc': 'Document with UTF-8: café, naïve, résumé'}
mock_point2 = MagicMock()
mock_point2.payload = {'doc': 'Chinese text: 你好世界'}
return [mock_point1, mock_point2]
@pytest.fixture
def mock_empty_query_response():
"""Mock empty query response"""
return []
@pytest.fixture
def mock_large_query_response():
"""Mock large query response with many results"""
mock_points = []
for i in range(10):
mock_point = MagicMock()
mock_point.payload = {'doc': f'document chunk {i}'}
mock_points.append(mock_point)
return mock_points
@pytest.fixture
def mock_mixed_dimension_vectors():
"""Mock request with vectors of different dimensions"""
mock_message = MagicMock()
mock_message.vectors = [[0.1, 0.2], [0.3, 0.4, 0.5]] # 2D and 3D
mock_message.limit = 5
mock_message.user = 'dim_user'
mock_message.collection = 'dim_collection'
return mock_message