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Release/v1.2 (#457)
* Bump setup.py versions for 1.1 * PoC MCP server (#419) * Very initial MCP server PoC for TrustGraph * Put service on port 8000 * Add MCP container and packages to buildout * Update docs for API/CLI changes in 1.0 (#421) * Update some API basics for the 0.23/1.0 API change * Add MCP container push (#425) * Add command args to the MCP server (#426) * Host and port parameters * Added websocket arg * More docs * MCP client support (#427) - MCP client service - Tool request/response schema - API gateway support for mcp-tool - Message translation for tool request & response - Make mcp-tool using configuration service for information about where the MCP services are. * Feature/react call mcp (#428) Key Features - MCP Tool Integration: Added core MCP tool support with ToolClientSpec and ToolClient classes - API Enhancement: New mcp_tool method for flow-specific tool invocation - CLI Tooling: New tg-invoke-mcp-tool command for testing MCP integration - React Agent Enhancement: Fixed and improved multi-tool invocation capabilities - Tool Management: Enhanced CLI for tool configuration and management Changes - Added MCP tool invocation to API with flow-specific integration - Implemented ToolClientSpec and ToolClient for tool call handling - Updated agent-manager-react to invoke MCP tools with configurable types - Enhanced CLI with new commands and improved help text - Added comprehensive documentation for new CLI commands - Improved tool configuration management Testing - Added tg-invoke-mcp-tool CLI command for isolated MCP integration testing - Enhanced agent capability to invoke multiple tools simultaneously * Test suite executed from CI pipeline (#433) * Test strategy & test cases * Unit tests * Integration tests * Extending test coverage (#434) * Contract tests * Testing embeedings * Agent unit tests * Knowledge pipeline tests * Turn on contract tests * Increase storage test coverage (#435) * Fixing storage and adding tests * PR pipeline only runs quick tests * Empty configuration is returned as empty list, previously was not in response (#436) * Update config util to take files as well as command-line text (#437) * Updated CLI invocation and config model for tools and mcp (#438) * Updated CLI invocation and config model for tools and mcp * CLI anomalies * Tweaked the MCP tool implementation for new model * Update agent implementation to match the new model * Fix agent tools, now all tested * Fixed integration tests * Fix MCP delete tool params * Update Python deps to 1.2 * Update to enable knowledge extraction using the agent framework (#439) * Implement KG extraction agent (kg-extract-agent) * Using ReAct framework (agent-manager-react) * ReAct manager had an issue when emitting JSON, which conflicts which ReAct manager's own JSON messages, so refactored ReAct manager to use traditional ReAct messages, non-JSON structure. * Minor refactor to take the prompt template client out of prompt-template so it can be more readily used by other modules. kg-extract-agent uses this framework. * Migrate from setup.py to pyproject.toml (#440) * Converted setup.py to pyproject.toml * Modern package infrastructure as recommended by py docs * Install missing build deps (#441) * Install missing build deps (#442) * Implement logging strategy (#444) * Logging strategy and convert all prints() to logging invocations * Fix/startup failure (#445) * Fix loggin startup problems * Fix logging startup problems (#446) * Fix logging startup problems (#447) * Fixed Mistral OCR to use current API (#448) * Fixed Mistral OCR to use current API * Added PDF decoder tests * Fix Mistral OCR ident to be standard pdf-decoder (#450) * Fix Mistral OCR ident to be standard pdf-decoder * Correct test * Schema structure refactor (#451) * Write schema refactor spec * Implemented schema refactor spec * Structure data mvp (#452) * Structured data tech spec * Architecture principles * New schemas * Updated schemas and specs * Object extractor * Add .coveragerc * New tests * Cassandra object storage * Trying to object extraction working, issues exist * Validate librarian collection (#453) * Fix token chunker, broken API invocation (#454) * Fix token chunker, broken API invocation (#455) * Knowledge load utility CLI (#456) * Knowledge loader * More tests
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509 changed files with 49632 additions and 5159 deletions
153
tests/unit/test_chunking/conftest.py
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153
tests/unit/test_chunking/conftest.py
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import pytest
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from unittest.mock import AsyncMock, Mock, patch
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from trustgraph.schema import TextDocument, Metadata
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from trustgraph.chunking.recursive.chunker import Processor as RecursiveChunker
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from trustgraph.chunking.token.chunker import Processor as TokenChunker
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from prometheus_client import REGISTRY
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@pytest.fixture
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def mock_flow():
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"""Mock flow function that returns a mock output producer."""
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output_mock = AsyncMock()
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flow_mock = Mock(return_value=output_mock)
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return flow_mock, output_mock
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@pytest.fixture
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def mock_consumer():
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"""Mock consumer with test attributes."""
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consumer = Mock()
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consumer.id = "test-consumer"
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consumer.flow = "test-flow"
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return consumer
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@pytest.fixture
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def sample_text_document():
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"""Sample document with moderate length text."""
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metadata = Metadata(
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id="test-doc-1",
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metadata=[],
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user="test-user",
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collection="test-collection"
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)
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text = "The quick brown fox jumps over the lazy dog. " * 20
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return TextDocument(
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metadata=metadata,
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text=text.encode("utf-8")
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)
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@pytest.fixture
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def long_text_document():
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"""Long document for testing multiple chunks."""
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metadata = Metadata(
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id="test-doc-long",
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metadata=[],
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user="test-user",
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collection="test-collection"
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)
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# Create a long text that will definitely be chunked
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text = " ".join([f"Sentence number {i}. This is part of a long document." for i in range(200)])
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return TextDocument(
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metadata=metadata,
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text=text.encode("utf-8")
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)
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@pytest.fixture
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def unicode_text_document():
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"""Document with various unicode characters."""
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metadata = Metadata(
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id="test-doc-unicode",
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metadata=[],
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user="test-user",
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collection="test-collection"
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)
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text = """
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English: Hello World!
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Chinese: 你好世界
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Japanese: こんにちは世界
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Korean: 안녕하세요 세계
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Arabic: مرحبا بالعالم
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Russian: Привет мир
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Emoji: 🌍 🌎 🌏 😀 🎉
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Math: ∑ ∏ ∫ ∞ √ π
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Symbols: © ® ™ € £ ¥
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"""
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return TextDocument(
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metadata=metadata,
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text=text.encode("utf-8")
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)
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@pytest.fixture
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def empty_text_document():
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"""Empty document for edge case testing."""
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metadata = Metadata(
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id="test-doc-empty",
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metadata=[],
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user="test-user",
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collection="test-collection"
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)
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return TextDocument(
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metadata=metadata,
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text=b""
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)
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@pytest.fixture
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def mock_message(sample_text_document):
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"""Mock message containing a document."""
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msg = Mock()
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msg.value.return_value = sample_text_document
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return msg
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@pytest.fixture(autouse=True)
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def clear_metrics():
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"""Clear metrics before each test to avoid duplicates."""
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# Clear the chunk_metric class attribute if it exists
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if hasattr(RecursiveChunker, 'chunk_metric'):
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# Unregister from Prometheus registry first
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try:
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REGISTRY.unregister(RecursiveChunker.chunk_metric)
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except KeyError:
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pass # Already unregistered
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delattr(RecursiveChunker, 'chunk_metric')
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if hasattr(TokenChunker, 'chunk_metric'):
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try:
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REGISTRY.unregister(TokenChunker.chunk_metric)
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except KeyError:
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pass # Already unregistered
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delattr(TokenChunker, 'chunk_metric')
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yield
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# Clean up after test as well
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if hasattr(RecursiveChunker, 'chunk_metric'):
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try:
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REGISTRY.unregister(RecursiveChunker.chunk_metric)
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except KeyError:
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pass
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delattr(RecursiveChunker, 'chunk_metric')
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if hasattr(TokenChunker, 'chunk_metric'):
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try:
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REGISTRY.unregister(TokenChunker.chunk_metric)
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except KeyError:
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pass
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delattr(TokenChunker, 'chunk_metric')
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@pytest.fixture
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def mock_async_processor_init():
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"""Mock AsyncProcessor.__init__ to avoid taskgroup requirement."""
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def init_mock(self, **kwargs):
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# Set attributes that AsyncProcessor would normally set
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self.config_handlers = []
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self.specifications = []
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self.flows = {}
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self.id = kwargs.get('id', 'test-processor')
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# Don't call the real __init__
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with patch('trustgraph.base.async_processor.AsyncProcessor.__init__', init_mock):
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yield
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