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Lakehouse-native graph engine with git-style workflows
https://omnigraph.dev
54842808db
* feat(engine): sweep legacy __run__ branches via v2→v3 manifest migration Pre-v0.4.0 graphs can carry stale `__run__<id>` staging branches on the `__manifest` dataset, left by the Run state machine removed in MR-771. Lance's `list_branches` still enumerates them, so they leak into `branch_list()` and count as blocking branches at schema-apply time. Add a one-time `migrate_v2_to_v3` arm to the internal-schema dispatcher: on the first read-write open it enumerates `__manifest` branches, deletes every `__run__*` ref, and bumps the stamp to 3. Idempotent under retry (re-enumerates fresh each run). The `"__run__"` prefix is inlined so the migration does not depend on the run_registry guard that MR-770 removes next. This is the prerequisite sweep; the guard removal follows in the next commit. * refactor(engine): remove the legacy __run__ branch guard (MR-770) With the v2→v3 migration sweeping stale `__run__*` branches off `__manifest` on first read-write open, the defense-in-depth `is_internal_run_branch` guard is no longer needed. - delete `db/run_registry.rs`; drop the module + re-export from `db/mod.rs` - collapse `is_internal_system_branch` to the schema-apply-lock check only - `ensure_public_branch_ref`: drop the run-ref rejection; `__run__*` is now an ordinary branch name - `branch_merge`: reject `is_internal_system_branch` (was run-only) so the schema-apply lock is rejected consistently with create/delete — a small, deliberate tightening - update the inline schema-apply test + the writes integration tests (`public_branch_apis_reject_internal_run_refs` → `public_branch_apis_reject_internal_system_refs`, which also asserts `__run__*` now creates successfully) - docs: flip the "pending production sweep / defense-in-depth" notes to "auto-swept by the v2→v3 migration"; document the read-only-open limitation Known residual: the inert `_graph_runs.lance` / `_graph_run_actors.lance` bytes remain until a `StorageAdapter::delete_prefix` primitive lands. * fix(engine): run __run__ sweep at Omnigraph::open, not only on publish Review (PR #132) caught a regression: removing __run__ from `is_internal_system_branch` exposed legacy `__run__*` branches to the schema-apply blocking-branch checks (schema_apply.rs:104 and :778) and to `branch_list()`, but the v2→v3 sweep ran only inside the publisher's `load_publish_state`. On a pre-v0.4.0 graph whose first write is a schema apply, the blocking-branch check fires before any publish, so apply failed with "found non-main branches: __run__…". The same lazy timing also created a reverse hazard: a user-created `__run__*` branch on a still-v2 graph could be deleted by the first publish's sweep. Fix: run the internal-schema migration in `Omnigraph::open(ReadWrite)` (new `manifest::migrate_on_open`), before the coordinator reads branch state. The sweep now lands before any branch-observing code, and a graph is stamped v3 at open — so the one-time sweep can never catch a legitimately-created branch. Both checks and `branch_list` see the swept graph; correct by construction for every write path. Accepted residual: a read-only open of an unmigrated legacy graph still lists `__run__*` (read-only opens must not write, so they can't sweep). Documented. Regression test `legacy_run_branch_is_swept_on_open_and_does_not_block_schema_apply` confirmed RED before the fix (panicked on the branch_list leak assertion) and GREEN after. Also updates the stale schema_apply.rs comment, the writes.md "Migration code" section, and adds the v3 row to storage.md's migration table. * test(engine): sweep multiple legacy __run__ branches; doc nit Strengthen the v2→v3 migration test to synthesize three `__run__*` branches (a real legacy graph accumulates one per run) so the migration's delete loop is exercised on a single reused dataset handle, not just a single branch. Confirms multi-branch deletion is safe. Also drop a stale "active runs" reference from the branch_delete doc line. * fix(engine): force-delete in __run__ sweep for concurrency safety `migrate_v2_to_v3` ran `Dataset::delete_branch` (= `branches().delete(.., false)`), which errors "BranchContents not found" if the branch is already gone. Since the sweep now runs in `Omnigraph::open(ReadWrite)`, two processes opening the same legacy v2 graph concurrently would race: one wins each delete, the other's open fails. The migration only claimed idempotency under *sequential* retry. Switch to `Dataset::force_delete_branch` (= `delete(.., true)`), Lance's documented path for cleaning up zombie branches, which tolerates an already-absent branch. The sweep is now idempotent under concurrent runners and robust to partial/zombie state. Found in self-review; no behavior change for the common single-open path. * docs(release): note MR-770 __run__ cleanup in v0.6.1 * docs(branches): reconcile branch cleanup semantics |
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| .cargo | ||
| .context | ||
| .github | ||
| crates | ||
| docker | ||
| docs | ||
| scripts | ||
| .dockerignore | ||
| .gitignore | ||
| AGENTS.md | ||
| Cargo.lock | ||
| Cargo.toml | ||
| CLAUDE.md | ||
| CODE_OF_CONDUCT.md | ||
| CONTRIBUTING.md | ||
| Dockerfile | ||
| GOVERNANCE.md | ||
| LICENSE | ||
| og-cheet-sheet.md | ||
| omnigraph.example.yaml | ||
| openapi.json | ||
| README.md | ||
| rust-toolchain.toml | ||
| SECURITY.md | ||
Omnigraph
Lakehouse native graph engine built for context assembly
Omnigraph acts as operational state & coordination layer for agents
- Git-style versioning & branching
- Multimodal retrieval (graph+vector/fts+filters) optimized for context assembly
- Object storage native (S3, RustFS)
- Native blob-as-data support (docs, images, videos, etc)
- VPC, On-prem, hybrid deployment
Lanceformat as open storage layer
| AS CODE | What it means |
|---|---|
| Schema AS CODE | Typed .pg schemas, planned, applied, enforced |
| Context AS CODE | Linted queries & agentic nudges, versioned and reusable |
| Security AS CODE | Cedar policies enforced server-side on every mutation |
| Dashboards AS CODE | Declarative views & controls over the graph (coming) |
Core Use Cases
| Use case | What it's for |
|---|---|
| Company brain | Org knowledge unified into one queryable graph |
| Context graph | Decision traces and codified tribal knowledge |
| Agentic memory | Durable, versioned memory for long-running agents |
| Dev graph | Issues & dependency model for coding agents |
| R&D data layer | Experiments & trials data written into branches |
| ML workflows | Versioned, branchable graphs for training & eval |
| Karpathy's LLM wiki | A living, agent-updatable knowledge base |
Quick Install
curl -fsSL https://raw.githubusercontent.com/ModernRelay/omnigraph/main/scripts/install.sh | bash
This installs omnigraph and omnigraph-server into ~/.local/bin from
published release binaries.
Or install with Homebrew:
brew tap ModernRelay/tap
brew install ModernRelay/tap/omnigraph
For starter graphs and agent skills to bootstrap and operate Omnigraph, see ModernRelay/omnigraph-cookbooks.
One-Command Local RustFS Bootstrap
curl -fsSL https://raw.githubusercontent.com/ModernRelay/omnigraph/main/scripts/local-rustfs-bootstrap.sh | bash
That bootstrap:
- starts RustFS on
127.0.0.1:9000 - creates a bucket and S3-backed graph
- loads the checked-in context fixture
- launches
omnigraph-serveron127.0.0.1:8080
Docker must be installed and running first.
The RustFS bootstrap prefers the rolling edge binaries and only falls back to
source builds when release assets are unavailable.
If a previous run left objects under the same graph prefix but did not finish
initializing the graph, rerun with RESET_REPO=1 or set PREFIX to a new
value.
Common Commands
The same URI works for local paths, s3://…, or http://host:port.
omnigraph init --schema ./schema.pg ./graph.omni
omnigraph load --data ./data.jsonl ./graph.omni
omnigraph read --query ./queries.gq --name get_person --params '{"name":"Alice"}' ./graph.omni
omnigraph change --query ./queries.gq --name insert_person --params '{"name":"Mina"}' ./graph.omni
omnigraph branch create --from main feature-x ./graph.omni
omnigraph branch merge feature-x --into main ./graph.omni
See docs/user/cli.md for schema apply, snapshots, ingest, commits, and policy commands.
Clients
For programmatic access to a running omnigraph-server:
-
TypeScript SDK —
@modernrelay/omnigraph(source). Instance-per-client, typed errors, camelCase types, async-iterator streaming export.npm install @modernrelay/omnigraph -
Model Context Protocol server —
@modernrelay/omnigraph-mcp(source). Bridges Omnigraph to LLM hosts (Claude Desktop, Claude Code, …) over stdio. Exposes tools and resources for schema, branches, queries, mutations, ingest, and bundles curated best-practices guidance from the cookbook.npm install -g @modernrelay/omnigraph-mcp
Both packages are versioned in lockstep with omnigraph-server on major.minor: @modernrelay/omnigraph@X.Y.* targets omnigraph-server@X.Y.*. See ModernRelay/omnigraph-ts for the monorepo.
Docs
Build And Test
cargo build --workspace
cargo check --workspace
cargo test --workspace
Notes:
- Rust stable toolchain, edition 2024
- CI runs
cargo test --workspace --locked - Full CI and some local test flows require
protobuf-compiler - S3 integration tests expect an S3-compatible endpoint such as RustFS
Workspace Crates
crates/omnigraph-compiler: shared schema/query parser, typechecker, catalog, and IR loweringcrates/omnigraph: storage/runtime, branching, merge, change detection, and query executioncrates/omnigraph-cli: CLI for graph lifecycle (init/load/ingest), query/mutate, branch/commit/merge, schema/lint, snapshot/export, policy, and maintenance (optimize/cleanup)crates/omnigraph-server: Axum HTTP server for remote reads, changes, ingest, export, branches, and commits
Contributing
Please open an issue, spec, or design discussion before sending large code changes. Design feedback and concrete problem statements are the fastest way to collaborate on the roadmap.
Community
Join the Omnigraph Slack community to ask questions, share feedback, and follow development.