Lakehouse-native graph engine with git-style workflows https://omnigraph.dev
Find a file
Ragnor Comerford 3223b51cf1
MR-794 step 2: address PR #68 review — merge semantics, cardinality, residual
Five fixes from PR #68 review (Cursor Bugbot + Codex + Cubic):

* **scan_with_pending gains merge-shadow semantics** (Codex P1, Cubic P1#1):
  new `key_column: Option<&str>` parameter. When set, committed rows
  whose key value appears in any pending batch are excluded from the
  scan — making `scan_with_pending` correctly merge-semantic for chained
  updates instead of naively unioning. execute_update calls with
  Some("id"). Without this, a chained `update where age > 30` could
  match a row whose pending value already moved out of range.

* **Multi-delete on same table no longer trips ExpectedVersionMismatch**
  (Cursor Bugbot HIGH): open_table_for_mutation routes through
  reopen_for_mutation when staging.inline_committed has the table,
  using the post-inline-commit Lance version captured at record_inline
  time. The legacy open_for_mutation_on_branch fence (Lance HEAD ==
  manifest pinned) is correct cross-writer but wrong intra-query when
  deletes have already advanced HEAD on this table. Branch goes away
  when Lance ships two-phase delete (lance-format/lance#6658).

* **Cardinality validation consolidated** (Cursor LOW + Codex P2 +
  Cubic P1#2 + Cubic P2): new exec/staging::count_src_per_edge +
  enforce_cardinality_bounds shared by mutation and loader paths.
  Restores the missing min-cardinality check on the engine path.
  Loader Merge mode passes Some("id") to dedupe edges being updated
  by id (not double-count committed + pending). Loader Append mode
  and engine path pass None (ULID-generated ids never collide).

* **Dead count_rows_with_pending removed** (Cursor LOW): never called.

* **Misleading concat-helper comment fixed** (Cubic P3): claimed
  schema normalization the helper doesn't implement. Updated to match
  reality.

* **Documentation honesty** (Cubic P1#3): MR-794 narrows but doesn't
  eliminate the "Lance HEAD ahead of __manifest" drift class. Drift is
  unreachable for op-execution failures (the partial_failure test pins
  this), but a residual remains at the finalize→publisher boundary
  because Lance has no multi-dataset commit primitive: per-table
  commit_staged calls run sequentially before manifest commit. Updated
  docs/runs.md, docs/invariants.md §VI.25, docs/releases/v0.4.1.md to
  scope the claim precisely.

* **Failpoint test pinning the residual**: new
  mutation.post_finalize_pre_publisher failpoint + two tests in
  tests/failpoints.rs that confirm the documented residual behavior.
  Catches future regressions that widen the residual.

Test additions on tests/runs.rs:

* chained_updates_with_overlapping_predicate_respects_intermediate_value
* multi_statement_delete_on_same_node_table
* cascade_delete_node_then_explicit_delete_edge_on_same_table
* mutation_insert_edge_enforces_min_cardinality
* load_merge_mode_dedupes_edge_for_cardinality_count

113/113 engine integration tests pass (runs + end_to_end + consistency
+ staged_writes + validators). Failpoints feature build runs in CI.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-01 13:47:55 +02:00
.cargo Raise LANCE_MEM_POOL_SIZE to 1 GB in .cargo/config.toml 2026-04-19 22:27:49 +03:00
.context Investigate Lance MergeInsertBuilder CAS granularity (MR-766 prereq) 2026-04-28 23:30:17 +00:00
.github/workflows Merge pull request #60 from ModernRelay/ragnorc/omnigraph-spec 2026-04-29 00:15:19 +02:00
crates MR-794 step 2: address PR #68 review — merge semantics, cardinality, residual 2026-05-01 13:47:55 +02:00
docker Initial public Omnigraph repository 2026-04-10 20:49:41 +03:00
docs MR-794 step 2: address PR #68 review — merge semantics, cardinality, residual 2026-05-01 13:47:55 +02:00
scripts Merge pull request #60 from ModernRelay/ragnorc/omnigraph-spec 2026-04-29 00:15:19 +02:00
.dockerignore Initial public Omnigraph repository 2026-04-10 20:49:41 +03:00
.gitignore Ignore local-only working files 2026-04-26 16:41:15 +03:00
AGENTS.md MR-794 step 2: docs — runs/invariants/architecture/execution + cleanup 2026-05-01 10:43:19 +02:00
Cargo.lock MR-794 step 2: scaffold MutationStaging accumulator + scan_with_pending 2026-05-01 10:42:21 +02:00
Cargo.toml MR-794 step 2: scaffold MutationStaging accumulator + scan_with_pending 2026-05-01 10:42:21 +02:00
CLAUDE.md Add AGENTS.md as canonical agent guide; symlink CLAUDE.md to it 2026-04-28 23:10:09 +02:00
CODE_OF_CONDUCT.md Initial public Omnigraph repository 2026-04-10 20:49:41 +03:00
CONTRIBUTING.md Merge remote-tracking branch 'origin/main' into ragnorc/explore-api 2026-04-18 20:24:39 +02:00
Dockerfile Dockerfile: switch base from Docker Hub to ECR Public 2026-04-20 13:46:23 +03:00
LICENSE Initial public Omnigraph repository 2026-04-10 20:49:41 +03:00
og-cheet-sheet.md Add query lint and check commands 2026-04-13 00:37:44 +03:00
omnigraph.example.yaml example config: use graphs / cli.graph, matching the MR-603 rename 2026-04-18 23:40:35 +03:00
openapi.json MR-771: demote Run to direct-publish via expected_table_versions CAS 2026-04-30 08:52:50 +02:00
README.md Sharpen README tagline; add incident-response and compliance use cases (#58) 2026-04-28 03:46:21 +03:00
rust-toolchain.toml Initial public Omnigraph repository 2026-04-10 20:49:41 +03:00
SECURITY.md Initial public Omnigraph repository 2026-04-10 20:49:41 +03:00

Omnigraph

License: MIT Rust Crates.io CI

Lakehouse-native graph engine with git-style workflows.

Branch, commit, and merge typed graph data like source code. Multi-modal, self-hosted, open source.

Use Cases

  • On-prem & hybrid context graphs
  • Backbone for multi-agent research
  • Incident response graphs
  • Compliance & audit graphs
  • Enterprise knowledge systems

Capabilities

  • Typed schema, typed queries, and typed mutations
  • Schema-as-code, query validation and linting
  • Git-style graph workflows: branches, commits, merges, and transactional runs
  • Local, on-prem & cloud S3-native storage with snapshot-pinned reads
  • Graph traversal + text, fuzzy, BM25, vector, and RRF search in one runtime
  • Policy-as-code for server-side access control
  • Single CLI for multiple deployments

Quick Install

curl -fsSL https://raw.githubusercontent.com/ModernRelay/omnigraph/main/scripts/install.sh | bash

This installs omnigraph and omnigraph-server into ~/.local/bin from published release binaries.

Or install with Homebrew:

brew tap ModernRelay/tap
brew install ModernRelay/tap/omnigraph

For starter graphs and agent skills to bootstrap and operate Omnigraph, see ModernRelay/omnigraph-starters.

One-Command Local RustFS Bootstrap

curl -fsSL https://raw.githubusercontent.com/ModernRelay/omnigraph/main/scripts/local-rustfs-bootstrap.sh | bash

That bootstrap:

  • starts RustFS on 127.0.0.1:9000
  • creates a bucket and S3-backed repo
  • loads the checked-in context fixture
  • launches omnigraph-server on 127.0.0.1:8080

Docker must be installed and running first.

The RustFS bootstrap prefers the rolling edge binaries and only falls back to source builds when release assets are unavailable.

If a previous run left objects under the same repo prefix but did not finish initializing the repo, rerun with RESET_REPO=1 or set PREFIX to a new value.

Common Commands

The same URI works for local paths, s3://…, or http://host:port.

omnigraph init   --schema ./schema.pg ./repo.omni
omnigraph load   --data   ./data.jsonl ./repo.omni
omnigraph read   --query  ./queries.gq --name get_person --params '{"name":"Alice"}' ./repo.omni
omnigraph change --query  ./queries.gq --name insert_person --params '{"name":"Mina"}' ./repo.omni
omnigraph branch create --from main feature-x ./repo.omni
omnigraph branch merge  feature-x --into main ./repo.omni

See docs/cli.md for schema apply, snapshots, ingest, runs, and policy commands.

Docs

Build And Test

cargo build --workspace
cargo check --workspace
cargo test --workspace

Notes:

  • Rust stable toolchain, edition 2024
  • CI runs cargo test --workspace --locked
  • Full CI and some local test flows require protobuf-compiler
  • S3 integration tests expect an S3-compatible endpoint such as RustFS

Workspace Crates

  • crates/omnigraph-compiler: shared schema/query parser, typechecker, catalog, and IR lowering
  • crates/omnigraph: storage/runtime, branching, merge, change detection, and query execution
  • crates/omnigraph-cli: CLI for init/load/ingest/read/change/branch/snapshot/export/policy operations
  • crates/omnigraph-server: Axum HTTP server for remote reads, changes, ingest, export, branches, commits, and runs

Contributing

Please open an issue, spec, or design discussion before sending large code changes. Design feedback and concrete problem statements are the fastest way to collaborate on the roadmap.