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docs: add RFC-002 config & CLI architecture

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Layered config (user-global ~/.config/omnigraph/ + per-project), a
unifying `target` abstraction resolving to (locus, graph, sub-state,
credential) with embedded-URI XOR remote-server loci, multi-server ×
multi-graph client targeting, credentials by-reference, and the
file-naming decision: project and server config are one artifact
(`omnigraph.yaml`); the only differently-named file is the user-global
`config.yaml`, split by scope not role. Includes the 12-factor bind
portability rule (prefer --bind/OMNIGRAPH_BIND over a committed
server.bind) and the defined-locally / invoked-remotely model for
stored queries. Derived from first principles working backwards from
what the engine enables; validated against kube/Helix/git/compose.

Linked from docs/dev/index.md. Proposed; phased rollout for the
MR-973/974/981 family.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
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@ -59,6 +59,7 @@ Working documents for in-flight feature work. Removed when the work lands.
|---|---|
| Schema-lint chassis v1 (MR-694) — `--allow-data-loss`, soft/hard drops | [schema-lint-v1-plan.md](schema-lint-v1-plan.md) |
| Inline + stored queries, request/response envelope, MCP (MR-656 / MR-976 / MR-969) | [rfc-001-queries-envelope-mcp.md](rfc-001-queries-envelope-mcp.md) |
| Config & CLI architecture — layered config, client targeting, file naming (MR-973 / MR-974 / MR-981) | [rfc-002-config-cli-architecture.md](rfc-002-config-cli-architecture.md) |
## Boundary