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docs: document the queries registry, CLI, and invoke_query action
The stored-query surface shipped without user docs. Add it, per the same-PR maintenance contract: - policy.md: invoke_query as per-graph action #10 (branch-scoped), with the double-gating note; renumber graph_list; add it to the branch_scope list. - cli-reference.md: the `queries validate | list` command, and the `queries:` config block (per-graph + top-level) with mcp.expose/tool_name and the tool-name uniqueness rule. - server.md: boot-time stored-query type-check (refuse on breakage), noting invocation over HTTP/MCP is not yet exposed.
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@ -14,16 +14,17 @@ Per-graph actions (bind to `Omnigraph::Graph::"<graph_id>"`):
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6. `branch_delete`
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7. `branch_merge`
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8. `admin` — reserved for policy-management surfaces (hot reload, audit log, approvals). No call site today; see MR-724 for the reservation rationale.
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9. `invoke_query` — gates invoking a server-side stored query (the `queries:` registry). Branch-scoped, like `read` / `change`. Coarse in this release: an `invoke_query` allow rule permits any stored query on the graph; a future, additive refinement adds an optional per-query-name scope without changing rules written against the coarse action. No invocation call site yet — the handler lands in a later change. A stored *mutation* is double-gated: `invoke_query` to reach the tool, plus `change` for the write itself (the engine `_as` writers still enforce per the query body).
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Server-scoped action (v0.6.0+; binds to `Omnigraph::Server::"root"`):
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9. `graph_list` — `GET /graphs` registry enumeration (multi-graph mode)
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10. `graph_list` — `GET /graphs` registry enumeration (multi-graph mode)
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Server-scoped actions cannot use `branch_scope` or `target_branch_scope` — they operate on the registry, not on a graph's branches. A rule cannot mix server-scoped and per-graph actions; split into separate rules. (Runtime `graph_create` / `graph_delete` are reserved but not shipped in v0.6.0; operators add/remove graphs by editing `omnigraph.yaml` and restarting.)
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## Scope kinds
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- `branch_scope` — applied to source branch (`read`, `export`, `change`)
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- `branch_scope` — applied to source branch (`read`, `export`, `change`, `invoke_query`)
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- `target_branch_scope` — applied to destination (`schema_apply`, branch ops, run ops)
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- `protected_branches` — named list with special rules; rule scopes are `any | protected | unprotected`
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