omnigraph/docs/dev/rfc-003-mcp-server-surface.md

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# RFC-003: MCP Server Surface for `omnigraph-server`
**Status:** Proposed — buildable implementation spec.
**Date:** 2026-06-13
**Audience:** server/engine maintainers.
**Tickets:** MR-969 (stored queries + MCP exposure), MR-956 (OAuth/RFC-9728 layer),
MR-971 (per-server credential resolver — landed as RFC-007), MR-974 (`omnigraph mcp install`).
**Builds on:** [rfc-001-queries-envelope-mcp.md](rfc-001-queries-envelope-mcp.md)
(stored queries + the response envelope), [rfc-005-server-cluster-boot.md](rfc-005-server-cluster-boot.md)
(multi-graph boot), [rfc-007-operator-config.md](rfc-007-operator-config.md)
(client credential model), [rfc-009-unify-access-paths.md](rfc-009-unify-access-paths.md)
(one-contract/two-implementations posture).
**Target release:** v0.8.x.
**Re-validated against main** 2026-06-16 (post RFC-009 `omnigraph-api-types`/`GraphClient`,
RFC-011 cluster-only server, RFC-009 canonical `POST /load`, RFC-012 embeddings): every
`file:line` and `Reuses` citation below was re-checked against the merged tree; the
deltas are folded in (cluster-only routing in [§15](#15-routing--reuses-build_app),
the DTO crate move in [§9](#9-stored-query-projection), `/ingest``/load`, and the
docs(rfc-003): fold external review into correct-by-design fixes An external review pass raised 8 findings; verified 7 valid (2 confirmed against the engine coercer). Folded them in as class-closing fixes rather than point patches: - §9.1 (③④, the headline): the JSON-Schema generator was a second hand-written copy of the engine's input contract — Blob (base64 vs URI string) and nullable (explicit null) were two drifts of one class. Move the projection to a single param_json_schema in omnigraph-api-types (next to ParamKind/ParamDescriptor), fix Blob -> {"type":"string","format":"uri"} (query_input.rs:449 / api-types:354 say blob-URI string) and nullable -> anyOf[..,null] (query_input.rs:273,296), and lock it to json_value_to_literal_typed with a schema/engine equivalence test so any future drift is a CI failure. - §7/§4 (①): replace the fail-open "empty allowed_origins => skip" with a total OriginPolicy and a single McpHostPolicy::from_bind constructor (remote default DenyBrowsers, enforced by origin_guard independent of rmcp's empty-list quirk). No absent-=>-skip state can be constructed. - §6/§12/§16 (②): make the non-paginated list seam a stated contract (Vec<T>, no nextCursor; meta mode bounds large catalogs) and drop the pagination claims the signature couldn't express. - §9.3 (⑦): built-in/stored tool-name collision becomes a cluster validate/boot error (fold built-in names into the registry uniqueness check), not a silent skip — per the invariants deny-list. - §9.2 (⑥): stored_query_mode folded into the one per-graph mcp: block (Phase 6), not a floating key; not configurable until that surface exists. - §10/§1 (⑧): scope derives from the per-graph mount; server-scoped `health` becomes graph-scoped `graph_health` (server liveness stays REST /healthz). - §13 (⑤, doc-only): OpenAI row corrected to the `authorization` field; Phase-1 reachability via static bearer is unchanged. §17 records the locked decisions; the validation header notes the review pass.
2026-06-16 17:34:00 +02:00
per-query `expose`/`tool_name` deferral in [§17](#17-decisions--rollout)). An external
review pass (8 findings) was then folded in as **correct-by-design** fixes, not point
patches — the schema generator is locked to the engine coercer by an equivalence test
(§9.1), Origin is fail-closed by a single host-policy constructor (§7), the list seam is
non-paginated by contract (§6), and name collisions fail at validate-time (§9.3); the
resolved decisions are catalogued in [§17](#17-decisions--rollout).
**Validated against** (re-checked 2026-06-13): MCP protocol revision **`2025-11-25`**
(modelcontextprotocol.io), the official Rust SDK **`rmcp 1.7.0`** (crates.io /
github.com/modelcontextprotocol/rust-sdk), and current tool/security best practice
(Anthropic engineering, MCP spec security pages). Provider compatibility was
checked against the live docs of Claude Code/Desktop/web, the Claude Messages API
MCP connector, OpenAI's Responses API + ChatGPT connectors, Cursor, VS Code Copilot,
and OpenCode. Code snippets marked **`Reuses`** are present in `omnigraph-server`
today, cited to `file:line`; snippets marked **`New`** are the code to add.
---
## 1. Summary
Add a first-class **MCP (Model Context Protocol) server surface to
`omnigraph-server`**, served over **Streamable HTTP**, that projects the server's
operations as MCP **tools** and **resources** for LLM clients. Two tool populations
share one projection path:
1. **Built-in operational tools** — graph read/mutate, schema get/apply, branch
docs(rfc-003): fold external review into correct-by-design fixes An external review pass raised 8 findings; verified 7 valid (2 confirmed against the engine coercer). Folded them in as class-closing fixes rather than point patches: - §9.1 (③④, the headline): the JSON-Schema generator was a second hand-written copy of the engine's input contract — Blob (base64 vs URI string) and nullable (explicit null) were two drifts of one class. Move the projection to a single param_json_schema in omnigraph-api-types (next to ParamKind/ParamDescriptor), fix Blob -> {"type":"string","format":"uri"} (query_input.rs:449 / api-types:354 say blob-URI string) and nullable -> anyOf[..,null] (query_input.rs:273,296), and lock it to json_value_to_literal_typed with a schema/engine equivalence test so any future drift is a CI failure. - §7/§4 (①): replace the fail-open "empty allowed_origins => skip" with a total OriginPolicy and a single McpHostPolicy::from_bind constructor (remote default DenyBrowsers, enforced by origin_guard independent of rmcp's empty-list quirk). No absent-=>-skip state can be constructed. - §6/§12/§16 (②): make the non-paginated list seam a stated contract (Vec<T>, no nextCursor; meta mode bounds large catalogs) and drop the pagination claims the signature couldn't express. - §9.3 (⑦): built-in/stored tool-name collision becomes a cluster validate/boot error (fold built-in names into the registry uniqueness check), not a silent skip — per the invariants deny-list. - §9.2 (⑥): stored_query_mode folded into the one per-graph mcp: block (Phase 6), not a floating key; not configurable until that surface exists. - §10/§1 (⑧): scope derives from the per-graph mount; server-scoped `health` becomes graph-scoped `graph_health` (server liveness stays REST /healthz). - §13 (⑤, doc-only): OpenAI row corrected to the `authorization` field; Phase-1 reachability via static bearer is unchanged. §17 records the locked decisions; the validation header notes the review pass.
2026-06-16 17:34:00 +02:00
create/delete/merge/list, commit list/get, NDJSON load, and a graph-scoped
`graph_health` liveness tool, plus resources `omnigraph://schema` and
`omnigraph://branches`.
2. **Dynamic stored-query tools** — projected from the graph's loaded stored-query
registry: either one typed tool per query (small catalogs) or a
discovery + execute meta-tool pair (large catalogs) — see [§9](#9-stored-query-projection).
Every tool is **authorized by the server's existing Cedar policy engine**. The MCP
layer performs **no authentication of its own**: it consumes an already-resolved
actor identity from the server's bearer/OAuth middleware, so the **same endpoint
serves on-prem (static or customer-OIDC tokens) and cloud (OAuth 2.1) by
configuration only**. The transport is **stateless JSON over a single POST
endpoint** — the minimal conformant Streamable-HTTP shape, since the server emits no
server-initiated messages.
The surface is built so the existing local stdio MCP package can later collapse into
a thin stdio↔HTTP proxy over it, leaving one Cedar-gated, remotely-reachable tool
set ([§13](#13-provider-compatibility)).
## 2. Goals
- Project built-in tools **and** stored queries through **one** registry abstraction,
so `tools/list` / `tools/call` never special-case a population.
- Make `tools/list` and the callable set agree for argument-independent authorization,
both driven by Cedar; `tools/call` is always the authoritative gate.
- Keep the MCP layer **auth-method-agnostic**: it consumes a resolved actor, never a
raw token, and never branches on how authentication happened.
- Add **no business logic**: tools delegate to the same engine functions the HTTP
routes call.
- Be **code-mode-friendly** (typed schemas, structured output, stable names,
progressive disclosure) and **maximally client-compatible** (Streamable HTTP +
bearer today, OAuth 2.1 + RFC 9728 as an additive layer).
- Behaviour-neutral when unused: no MCP traffic ⇒ no change.
## 3. Non-Goals
- **Hosting an OAuth authorization server.** The server is a **Resource Server** only
(validates tokens, never issues them, never holds client secrets). The AS is a
separate concern (MR-956).
- **MCP prompts, elicitation, sampling, tasks, `tools/list_changed` subscriptions,
resource subscriptions, server-initiated messages** — none required, which is what
permits the stateless POST-only transport. (`tools/list_changed` is reconsidered
only if the registry gains runtime reload.)
- **stdio transport inside the server** — stdio stays in the TS package (later a proxy).
- **Client-side "code mode" machinery** (TS wrapper generation, sandboxes, tool
search/deferral) — those are client/runtime concerns; see [§12](#12-code-mode-compatibility)
for what the server does to support them and what it deliberately does not build.
- **Cross-graph tool listing** — per-graph catalogs only.
## 4. Protocol target
Target MCP revision **`2025-11-25`** (current). `rmcp 1.7.0` advertises this as its
latest and negotiates down to any of `2024-11-05 / 2025-03-26 / 2025-06-18 /
2025-11-25`; an absent `MCP-Protocol-Version` header defaults to `2025-03-26` and an
unsupported one is a `400`. Revision `2025-06-18` is the floor we rely on for two
features: **structured tool output** (`outputSchema` + `structuredContent`) and the
**OAuth Resource-Server** model. From `2025-11-25` we adopt: **input-validation
errors as tool-execution errors** (SEP-1303), **JSON Schema 2020-12** as the default
docs(rfc-003): fold external review into correct-by-design fixes An external review pass raised 8 findings; verified 7 valid (2 confirmed against the engine coercer). Folded them in as class-closing fixes rather than point patches: - §9.1 (③④, the headline): the JSON-Schema generator was a second hand-written copy of the engine's input contract — Blob (base64 vs URI string) and nullable (explicit null) were two drifts of one class. Move the projection to a single param_json_schema in omnigraph-api-types (next to ParamKind/ParamDescriptor), fix Blob -> {"type":"string","format":"uri"} (query_input.rs:449 / api-types:354 say blob-URI string) and nullable -> anyOf[..,null] (query_input.rs:273,296), and lock it to json_value_to_literal_typed with a schema/engine equivalence test so any future drift is a CI failure. - §7/§4 (①): replace the fail-open "empty allowed_origins => skip" with a total OriginPolicy and a single McpHostPolicy::from_bind constructor (remote default DenyBrowsers, enforced by origin_guard independent of rmcp's empty-list quirk). No absent-=>-skip state can be constructed. - §6/§12/§16 (②): make the non-paginated list seam a stated contract (Vec<T>, no nextCursor; meta mode bounds large catalogs) and drop the pagination claims the signature couldn't express. - §9.3 (⑦): built-in/stored tool-name collision becomes a cluster validate/boot error (fold built-in names into the registry uniqueness check), not a silent skip — per the invariants deny-list. - §9.2 (⑥): stored_query_mode folded into the one per-graph mcp: block (Phase 6), not a floating key; not configurable until that surface exists. - §10/§1 (⑧): scope derives from the per-graph mount; server-scoped `health` becomes graph-scoped `graph_health` (server liveness stays REST /healthz). - §13 (⑤, doc-only): OpenAI row corrected to the `authorization` field; Phase-1 reachability via static bearer is unchanged. §17 records the locked decisions; the validation header notes the review pass.
2026-06-16 17:34:00 +02:00
dialect, **`403` on a present-but-disallowed `Origin`** (validated **fail-closed** by a
single host-policy constructor — §7, not a config-presence default), and
**`WWW-Authenticate` made optional** with a `.well-known` fallback.
**Transport shape (stateless Streamable HTTP).** The server exposes one endpoint that
accepts `POST` (and answers `GET`/`DELETE` with `405 + Allow: POST`). For a JSON-RPC
*request* it returns one `application/json` object; it opens no SSE stream, assigns no
`Mcp-Session-Id`, and treats every request independently — a fully conformant
stateless server. It **MUST** validate `Origin` (`403` on mismatch) and honor
`MCP-Protocol-Version`. `rmcp` delivers all of these in stateless mode (§7).
## 5. Crate architecture
Two crates; `rmcp` is contained to one of them.
```
omnigraph-server (implements McpBackend; all omnigraph tool/Cedar/dispatch logic)
│ depends on
omnigraph-mcp (rmcp Streamable-HTTP transport, the McpBackend trait, rmcp model re-exports)
│ depends on
rmcp 1.7 + tower-http(limit) + axum + http
```
The dependency **must** go `server → mcp`. The server binary mounts `/mcp`, so a
`mcp → server` edge cycles at the package level (`server-bin → omnigraph-mcp →
server-lib`), which Cargo rejects. The trait inverts the direction — the crate
defines the seam, the server fills it — which is also why the crate can never name an
omnigraph type (`AppState`, `GraphHandle`, the handlers); it abstracts over them.
`crates/omnigraph-mcp/Cargo.toml`:
```toml
[package]
name = "omnigraph-mcp"
edition = "2024" # rmcp 1.7 is itself edition 2024 — no friction
version.workspace = true
[dependencies]
# `server` is on by rmcp's default features; `transport-streamable-http-server`
# pulls in the tower service + http stack. Do NOT enable rmcp's `local` feature —
# it cfg's the StreamableHttpService tower wiring out.
rmcp = { version = "1.7", default-features = false, features = ["server", "transport-streamable-http-server"] }
axum = { workspace = true }
http = "1"
tower-http = { workspace = true, features = ["limit"] }
tokio = { workspace = true }
async-trait = { workspace = true }
serde_json = { workspace = true }
```
Add `"crates/omnigraph-mcp"` to the workspace `members`; in
`omnigraph-server/Cargo.toml` add `omnigraph-mcp` and **no direct `rmcp` dep**
(verified absent today). The verification gate is `cargo tree -p omnigraph-server -e
normal | grep rmcp` showing rmcp only transitively under `omnigraph-mcp`.
## 6. The `McpBackend` seam — `New` in `omnigraph-mcp`
```rust
// crates/omnigraph-mcp/src/lib.rs
use async_trait::async_trait;
// rmcp model types re-exported so the server speaks rmcp via `omnigraph_mcp::…`
// and carries no direct rmcp dependency.
pub use rmcp::model::{
CallToolResult, Content, RawResource, ReadResourceResult, Resource,
ResourceContents, ServerCapabilities, ServerInfo, Tool, ToolAnnotations,
};
pub use rmcp::ErrorData as McpError; // JSON-RPC error type (method_not_found=-32601, invalid_params=-32602, internal_error=-32603)
pub type JsonObject = serde_json::Map<String, serde_json::Value>;
#[async_trait]
pub trait McpBackend: Clone + Send + Sync + 'static {
fn server_info(&self) -> ServerInfo;
async fn list_tools(&self, parts: &http::request::Parts) -> Result<Vec<Tool>, McpError>;
async fn call_tool(&self, parts: &http::request::Parts, name: &str, args: JsonObject) -> Result<CallToolResult, McpError>;
async fn list_resources(&self, parts: &http::request::Parts) -> Result<Vec<Resource>, McpError>;
async fn read_resource(&self, parts: &http::request::Parts, uri: &str) -> Result<ReadResourceResult, McpError>;
}
```
docs(rfc-003): fold external review into correct-by-design fixes An external review pass raised 8 findings; verified 7 valid (2 confirmed against the engine coercer). Folded them in as class-closing fixes rather than point patches: - §9.1 (③④, the headline): the JSON-Schema generator was a second hand-written copy of the engine's input contract — Blob (base64 vs URI string) and nullable (explicit null) were two drifts of one class. Move the projection to a single param_json_schema in omnigraph-api-types (next to ParamKind/ParamDescriptor), fix Blob -> {"type":"string","format":"uri"} (query_input.rs:449 / api-types:354 say blob-URI string) and nullable -> anyOf[..,null] (query_input.rs:273,296), and lock it to json_value_to_literal_typed with a schema/engine equivalence test so any future drift is a CI failure. - §7/§4 (①): replace the fail-open "empty allowed_origins => skip" with a total OriginPolicy and a single McpHostPolicy::from_bind constructor (remote default DenyBrowsers, enforced by origin_guard independent of rmcp's empty-list quirk). No absent-=>-skip state can be constructed. - §6/§12/§16 (②): make the non-paginated list seam a stated contract (Vec<T>, no nextCursor; meta mode bounds large catalogs) and drop the pagination claims the signature couldn't express. - §9.3 (⑦): built-in/stored tool-name collision becomes a cluster validate/boot error (fold built-in names into the registry uniqueness check), not a silent skip — per the invariants deny-list. - §9.2 (⑥): stored_query_mode folded into the one per-graph mcp: block (Phase 6), not a floating key; not configurable until that surface exists. - §10/§1 (⑧): scope derives from the per-graph mount; server-scoped `health` becomes graph-scoped `graph_health` (server liveness stays REST /healthz). - §13 (⑤, doc-only): OpenAI row corrected to the `authorization` field; Phase-1 reachability via static bearer is unchanged. §17 records the locked decisions; the validation header notes the review pass.
2026-06-16 17:34:00 +02:00
**The list seam is non-paginated by contract — deliberately.** `list_tools` /
`list_resources` return the *full* set, so `McpService` always emits `nextCursor:
null`. This is correct-by-design for this surface, not an oversight: the catalog is
bounded — built-ins are a fixed ~dozen, and a large stored-query catalog is bounded by
the `meta` projection mode (§9.2), which collapses N queries into two tools rather than
leaning on `tools/list` paging. The trait return type (`Vec<T>`) *is* the contract; the
doc must not claim pagination the signature can't express (§12, §16 are aligned to this
— no `tools/list`/`resources/list` cursor). If a future surface genuinely needs paging,
that is a seam-signature change (`-> ListToolsResult` with a cursor), made together
with the capability — never a doc promise ahead of the type.
`&http::request::Parts` is the decoupling mechanism. The crate hands the backend the
request parts; the backend reads **its own** types out of `parts.extensions`. The
crate never names an omnigraph type, so it is reusable and auth stays decoupled (§8).
> `rmcp`'s own `ServerHandler` trait uses RPITIT (`-> impl Future + …`), not
> `async-trait`. Our `McpBackend` deliberately uses `#[async_trait]`: it is
> implemented once by the server, the boxed future is negligible at MCP QPS, and the
> server already depends on `async-trait`. Either style compiles on edition 2024.
## 7. Transport — `New` in `omnigraph-mcp`
```rust
// crates/omnigraph-mcp/src/transport.rs
use std::sync::Arc;
use rmcp::transport::streamable_http_server::{
StreamableHttpServerConfig, StreamableHttpService,
session::never::NeverSessionManager, // stateless ⇒ reject all session ops
};
docs(rfc-003): fold external review into correct-by-design fixes An external review pass raised 8 findings; verified 7 valid (2 confirmed against the engine coercer). Folded them in as class-closing fixes rather than point patches: - §9.1 (③④, the headline): the JSON-Schema generator was a second hand-written copy of the engine's input contract — Blob (base64 vs URI string) and nullable (explicit null) were two drifts of one class. Move the projection to a single param_json_schema in omnigraph-api-types (next to ParamKind/ParamDescriptor), fix Blob -> {"type":"string","format":"uri"} (query_input.rs:449 / api-types:354 say blob-URI string) and nullable -> anyOf[..,null] (query_input.rs:273,296), and lock it to json_value_to_literal_typed with a schema/engine equivalence test so any future drift is a CI failure. - §7/§4 (①): replace the fail-open "empty allowed_origins => skip" with a total OriginPolicy and a single McpHostPolicy::from_bind constructor (remote default DenyBrowsers, enforced by origin_guard independent of rmcp's empty-list quirk). No absent-=>-skip state can be constructed. - §6/§12/§16 (②): make the non-paginated list seam a stated contract (Vec<T>, no nextCursor; meta mode bounds large catalogs) and drop the pagination claims the signature couldn't express. - §9.3 (⑦): built-in/stored tool-name collision becomes a cluster validate/boot error (fold built-in names into the registry uniqueness check), not a silent skip — per the invariants deny-list. - §9.2 (⑥): stored_query_mode folded into the one per-graph mcp: block (Phase 6), not a floating key; not configurable until that surface exists. - §10/§1 (⑧): scope derives from the per-graph mount; server-scoped `health` becomes graph-scoped `graph_health` (server liveness stays REST /healthz). - §13 (⑤, doc-only): OpenAI row corrected to the `authorization` field; Phase-1 reachability via static bearer is unchanged. §17 records the locked decisions; the validation header notes the review pass.
2026-06-16 17:34:00 +02:00
// Host + Origin posture as a TOTAL choice — there is no `None ⇒ skip` state to leak
// into a fail-open default. `OriginPolicy` is the by-design closure for the Origin
// class: every deployment lands in exactly one arm, chosen once by `from_bind`.
pub enum OriginPolicy {
Allow(Vec<String>), // browser clients from these origins; any OTHER present Origin → 403
DenyBrowsers, // no browser clients expected; ANY present Origin → 403 (non-browser MCP clients send none)
Unchecked, // explicit opt-out (loopback dev / trusted network) — never the remote default
}
pub struct McpHostPolicy {
docs(rfc-003): fold external review into correct-by-design fixes An external review pass raised 8 findings; verified 7 valid (2 confirmed against the engine coercer). Folded them in as class-closing fixes rather than point patches: - §9.1 (③④, the headline): the JSON-Schema generator was a second hand-written copy of the engine's input contract — Blob (base64 vs URI string) and nullable (explicit null) were two drifts of one class. Move the projection to a single param_json_schema in omnigraph-api-types (next to ParamKind/ParamDescriptor), fix Blob -> {"type":"string","format":"uri"} (query_input.rs:449 / api-types:354 say blob-URI string) and nullable -> anyOf[..,null] (query_input.rs:273,296), and lock it to json_value_to_literal_typed with a schema/engine equivalence test so any future drift is a CI failure. - §7/§4 (①): replace the fail-open "empty allowed_origins => skip" with a total OriginPolicy and a single McpHostPolicy::from_bind constructor (remote default DenyBrowsers, enforced by origin_guard independent of rmcp's empty-list quirk). No absent-=>-skip state can be constructed. - §6/§12/§16 (②): make the non-paginated list seam a stated contract (Vec<T>, no nextCursor; meta mode bounds large catalogs) and drop the pagination claims the signature couldn't express. - §9.3 (⑦): built-in/stored tool-name collision becomes a cluster validate/boot error (fold built-in names into the registry uniqueness check), not a silent skip — per the invariants deny-list. - §9.2 (⑥): stored_query_mode folded into the one per-graph mcp: block (Phase 6), not a floating key; not configurable until that surface exists. - §10/§1 (⑧): scope derives from the per-graph mount; server-scoped `health` becomes graph-scoped `graph_health` (server liveness stays REST /healthz). - §13 (⑤, doc-only): OpenAI row corrected to the `authorization` field; Phase-1 reachability via static bearer is unchanged. §17 records the locked decisions; the validation header notes the review pass.
2026-06-16 17:34:00 +02:00
pub allowed_hosts: Option<Vec<String>>, // None ⇒ accept any Host (DNS-rebinding defense relaxed for a known-public bind)
pub origin: OriginPolicy, // no Option — a total decision
}
impl McpHostPolicy {
// The ONLY constructor. Host and Origin posture are derived together from the
// bind + config, fail-closed: a remote bind with no configured origins is
// `DenyBrowsers` (a present Origin is rejected), NOT "skip". A caller cannot
// construct a fail-open policy because the struct has no skip-by-absence state.
pub fn from_bind(bind: &SocketAddr, public_hosts: &[String], browser_origins: &[String]) -> Self {
let loopback = bind.ip().is_loopback();
Self {
feat(mcp): MCP server surface — Streamable-HTTP transport + tool/resource projection (RFC-003) Add the `omnigraph-mcp` crate (stateless Streamable-HTTP transport, `McpBackend` seam, fail-closed Host/Origin policy) and the server backend projecting built-in operations and the per-graph stored-query registry as MCP tools + resources over `POST /graphs/{id}/mcp`. Every tool delegates to the same engine/handler functions the REST routes use and is gated by the same Cedar `authorize` path; reads/writes carry structured output. Includes three correctness fixes from review + live testing: - tools/list is a faithful relaxation of the per-call gate: a built-in whose authorization depends on a caller-chosen branch is shown iff the actor could invoke it on some branch, via PolicyEngine::permits_on_any_branch (capability probe through the same Cedar authorizer). A fabricated-`main` probe wrongly hid graph_mutate under the canonical "protect main, write unprotected" policy. - The stored-query surface honors mode + `expose` on call as well as on list: resolve_stored_tool is the single membership test, so the meta pair (stored_query_list/stored_query_run) is callable only in `meta` mode and stored_query_run resolves exposed-only. An `expose:false` query is unreachable by name on the agent surface (it stays HTTP/service-callable). - The loopback Host allow-list is the full set [127.0.0.1, ::1, localhost] (matches rmcp's default), so an IPv6 loopback `Host: [::1]` is accepted regardless of which stack the server bound. The protocol-version contract is documented (initialize negotiates the version in its body, so the MCP-Protocol-Version header is validated on non-init requests only) and pinned by a test. Tests: omnigraph-mcp/tests/standalone.rs, omnigraph-server/tests/mcp.rs, omnigraph-policy permits_on_any_branch unit test, omnigraph-api-types schema projection. Full workspace gate green.
2026-06-17 14:00:52 +02:00
// Loopback bind ⇒ the full loopback Host set (both stacks + the
// hostname alias), matching rmcp's default `["localhost","127.0.0.1","::1"]`.
// The Host header is independent of the bound socket (in-process,
// proxies, dual-stack localhost), so a 127-bound server must still
// accept a `[::1]` Host — deriving the list from `bind.ip()` alone 403'd it.
allowed_hosts: if loopback { Some(vec!["127.0.0.1".into(), "::1".into(), "localhost".into()]) }
docs(rfc-003): fold external review into correct-by-design fixes An external review pass raised 8 findings; verified 7 valid (2 confirmed against the engine coercer). Folded them in as class-closing fixes rather than point patches: - §9.1 (③④, the headline): the JSON-Schema generator was a second hand-written copy of the engine's input contract — Blob (base64 vs URI string) and nullable (explicit null) were two drifts of one class. Move the projection to a single param_json_schema in omnigraph-api-types (next to ParamKind/ParamDescriptor), fix Blob -> {"type":"string","format":"uri"} (query_input.rs:449 / api-types:354 say blob-URI string) and nullable -> anyOf[..,null] (query_input.rs:273,296), and lock it to json_value_to_literal_typed with a schema/engine equivalence test so any future drift is a CI failure. - §7/§4 (①): replace the fail-open "empty allowed_origins => skip" with a total OriginPolicy and a single McpHostPolicy::from_bind constructor (remote default DenyBrowsers, enforced by origin_guard independent of rmcp's empty-list quirk). No absent-=>-skip state can be constructed. - §6/§12/§16 (②): make the non-paginated list seam a stated contract (Vec<T>, no nextCursor; meta mode bounds large catalogs) and drop the pagination claims the signature couldn't express. - §9.3 (⑦): built-in/stored tool-name collision becomes a cluster validate/boot error (fold built-in names into the registry uniqueness check), not a silent skip — per the invariants deny-list. - §9.2 (⑥): stored_query_mode folded into the one per-graph mcp: block (Phase 6), not a floating key; not configurable until that surface exists. - §10/§1 (⑧): scope derives from the per-graph mount; server-scoped `health` becomes graph-scoped `graph_health` (server liveness stays REST /healthz). - §13 (⑤, doc-only): OpenAI row corrected to the `authorization` field; Phase-1 reachability via static bearer is unchanged. §17 records the locked decisions; the validation header notes the review pass.
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else if public_hosts.is_empty() { None } else { Some(public_hosts.to_vec()) },
origin: if !browser_origins.is_empty() { OriginPolicy::Allow(browser_origins.to_vec()) }
else if loopback { OriginPolicy::Unchecked } // local dev convenience only
else { OriginPolicy::DenyBrowsers }, // remote default: fail-closed
}
}
}
pub fn mcp_router<B: McpBackend>(backend: B, body_limit: usize, hosts: McpHostPolicy) -> axum::Router {
// StreamableHttpServerConfig is #[non_exhaustive]; its Default is stateful_mode=true,
// json_response=false, allowed_hosts=loopback. ALL THREE must be overridden for a
// remote stateless JSON server — build from Default and flip via the with_* setters.
let mut config = StreamableHttpServerConfig::default()
.with_stateful_mode(false)
.with_json_response(true);
docs(rfc-003): fold external review into correct-by-design fixes An external review pass raised 8 findings; verified 7 valid (2 confirmed against the engine coercer). Folded them in as class-closing fixes rather than point patches: - §9.1 (③④, the headline): the JSON-Schema generator was a second hand-written copy of the engine's input contract — Blob (base64 vs URI string) and nullable (explicit null) were two drifts of one class. Move the projection to a single param_json_schema in omnigraph-api-types (next to ParamKind/ParamDescriptor), fix Blob -> {"type":"string","format":"uri"} (query_input.rs:449 / api-types:354 say blob-URI string) and nullable -> anyOf[..,null] (query_input.rs:273,296), and lock it to json_value_to_literal_typed with a schema/engine equivalence test so any future drift is a CI failure. - §7/§4 (①): replace the fail-open "empty allowed_origins => skip" with a total OriginPolicy and a single McpHostPolicy::from_bind constructor (remote default DenyBrowsers, enforced by origin_guard independent of rmcp's empty-list quirk). No absent-=>-skip state can be constructed. - §6/§12/§16 (②): make the non-paginated list seam a stated contract (Vec<T>, no nextCursor; meta mode bounds large catalogs) and drop the pagination claims the signature couldn't express. - §9.3 (⑦): built-in/stored tool-name collision becomes a cluster validate/boot error (fold built-in names into the registry uniqueness check), not a silent skip — per the invariants deny-list. - §9.2 (⑥): stored_query_mode folded into the one per-graph mcp: block (Phase 6), not a floating key; not configurable until that surface exists. - §10/§1 (⑧): scope derives from the per-graph mount; server-scoped `health` becomes graph-scoped `graph_health` (server liveness stays REST /healthz). - §13 (⑤, doc-only): OpenAI row corrected to the `authorization` field; Phase-1 reachability via static bearer is unchanged. §17 records the locked decisions; the validation header notes the review pass.
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config = match &hosts.allowed_hosts {
Some(list) => config.with_allowed_hosts(list.clone()),
None => config.disable_allowed_hosts(), // accept any Host
};
docs(rfc-003): fold external review into correct-by-design fixes An external review pass raised 8 findings; verified 7 valid (2 confirmed against the engine coercer). Folded them in as class-closing fixes rather than point patches: - §9.1 (③④, the headline): the JSON-Schema generator was a second hand-written copy of the engine's input contract — Blob (base64 vs URI string) and nullable (explicit null) were two drifts of one class. Move the projection to a single param_json_schema in omnigraph-api-types (next to ParamKind/ParamDescriptor), fix Blob -> {"type":"string","format":"uri"} (query_input.rs:449 / api-types:354 say blob-URI string) and nullable -> anyOf[..,null] (query_input.rs:273,296), and lock it to json_value_to_literal_typed with a schema/engine equivalence test so any future drift is a CI failure. - §7/§4 (①): replace the fail-open "empty allowed_origins => skip" with a total OriginPolicy and a single McpHostPolicy::from_bind constructor (remote default DenyBrowsers, enforced by origin_guard independent of rmcp's empty-list quirk). No absent-=>-skip state can be constructed. - §6/§12/§16 (②): make the non-paginated list seam a stated contract (Vec<T>, no nextCursor; meta mode bounds large catalogs) and drop the pagination claims the signature couldn't express. - §9.3 (⑦): built-in/stored tool-name collision becomes a cluster validate/boot error (fold built-in names into the registry uniqueness check), not a silent skip — per the invariants deny-list. - §9.2 (⑥): stored_query_mode folded into the one per-graph mcp: block (Phase 6), not a floating key; not configurable until that surface exists. - §10/§1 (⑧): scope derives from the per-graph mount; server-scoped `health` becomes graph-scoped `graph_health` (server liveness stays REST /healthz). - §13 (⑤, doc-only): OpenAI row corrected to the `authorization` field; Phase-1 reachability via static bearer is unchanged. §17 records the locked decisions; the validation header notes the review pass.
2026-06-16 17:34:00 +02:00
// rmcp validates Origin ONLY when allowed_origins is non-empty (empty ⇒ rmcp skips),
// so DenyBrowsers cannot be expressed by handing rmcp a list. We therefore enforce
// OriginPolicy in a thin pre-layer that 403s a disallowed present Origin BEFORE rmcp
// — making fail-closed independent of rmcp's empty-list semantics (the root cause of
// the original fail-open default). `Allow` also configures rmcp as defense-in-depth.
if let OriginPolicy::Allow(origins) = &hosts.origin { config = config.with_allowed_origins(origins.clone()); }
// service_factory returns Result<S, io::Error>; NeverSessionManager pairs with stateless mode.
let svc = StreamableHttpService::new(
move || Ok(McpService::new(backend.clone())),
Arc::new(NeverSessionManager::default()),
config,
);
axum::Router::new()
.route_service("/mcp", svc)
docs(rfc-003): fold external review into correct-by-design fixes An external review pass raised 8 findings; verified 7 valid (2 confirmed against the engine coercer). Folded them in as class-closing fixes rather than point patches: - §9.1 (③④, the headline): the JSON-Schema generator was a second hand-written copy of the engine's input contract — Blob (base64 vs URI string) and nullable (explicit null) were two drifts of one class. Move the projection to a single param_json_schema in omnigraph-api-types (next to ParamKind/ParamDescriptor), fix Blob -> {"type":"string","format":"uri"} (query_input.rs:449 / api-types:354 say blob-URI string) and nullable -> anyOf[..,null] (query_input.rs:273,296), and lock it to json_value_to_literal_typed with a schema/engine equivalence test so any future drift is a CI failure. - §7/§4 (①): replace the fail-open "empty allowed_origins => skip" with a total OriginPolicy and a single McpHostPolicy::from_bind constructor (remote default DenyBrowsers, enforced by origin_guard independent of rmcp's empty-list quirk). No absent-=>-skip state can be constructed. - §6/§12/§16 (②): make the non-paginated list seam a stated contract (Vec<T>, no nextCursor; meta mode bounds large catalogs) and drop the pagination claims the signature couldn't express. - §9.3 (⑦): built-in/stored tool-name collision becomes a cluster validate/boot error (fold built-in names into the registry uniqueness check), not a silent skip — per the invariants deny-list. - §9.2 (⑥): stored_query_mode folded into the one per-graph mcp: block (Phase 6), not a floating key; not configurable until that surface exists. - §10/§1 (⑧): scope derives from the per-graph mount; server-scoped `health` becomes graph-scoped `graph_health` (server liveness stays REST /healthz). - §13 (⑤, doc-only): OpenAI row corrected to the `authorization` field; Phase-1 reachability via static bearer is unchanged. §17 records the locked decisions; the validation header notes the review pass.
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.layer(origin_guard(hosts.origin)) // fail-closed Origin enforcement (no-op only for Unchecked)
// rmcp reads the body directly (not via an axum extractor), so axum's
// DefaultBodyLimit does NOT bound /mcp — the tower-http layer does.
.layer(tower_http::limit::RequestBodyLimitLayer::new(body_limit))
}
```
`McpService<B>` implements rmcp's `ServerHandler`, pulls `&Parts` out of the request
context once, and delegates each method to `B`. rmcp's `StreamableHttpService`
**consumes the body and injects the remaining `http::request::Parts` into
`RequestContext.extensions`** (this is documented and load-bearing — see §8); inside
the handler, `ctx.extensions.get::<http::request::Parts>()` returns those parts.
**Conformance the stateless transport gives for free** (verified in rmcp 1.7
`tower.rs`): `GET`/`DELETE /mcp → 405` with `Allow: POST`; a disallowed `Host`
docs(rfc-003): fold external review into correct-by-design fixes An external review pass raised 8 findings; verified 7 valid (2 confirmed against the engine coercer). Folded them in as class-closing fixes rather than point patches: - §9.1 (③④, the headline): the JSON-Schema generator was a second hand-written copy of the engine's input contract — Blob (base64 vs URI string) and nullable (explicit null) were two drifts of one class. Move the projection to a single param_json_schema in omnigraph-api-types (next to ParamKind/ParamDescriptor), fix Blob -> {"type":"string","format":"uri"} (query_input.rs:449 / api-types:354 say blob-URI string) and nullable -> anyOf[..,null] (query_input.rs:273,296), and lock it to json_value_to_literal_typed with a schema/engine equivalence test so any future drift is a CI failure. - §7/§4 (①): replace the fail-open "empty allowed_origins => skip" with a total OriginPolicy and a single McpHostPolicy::from_bind constructor (remote default DenyBrowsers, enforced by origin_guard independent of rmcp's empty-list quirk). No absent-=>-skip state can be constructed. - §6/§12/§16 (②): make the non-paginated list seam a stated contract (Vec<T>, no nextCursor; meta mode bounds large catalogs) and drop the pagination claims the signature couldn't express. - §9.3 (⑦): built-in/stored tool-name collision becomes a cluster validate/boot error (fold built-in names into the registry uniqueness check), not a silent skip — per the invariants deny-list. - §9.2 (⑥): stored_query_mode folded into the one per-graph mcp: block (Phase 6), not a floating key; not configurable until that surface exists. - §10/§1 (⑧): scope derives from the per-graph mount; server-scoped `health` becomes graph-scoped `graph_health` (server liveness stays REST /healthz). - §13 (⑤, doc-only): OpenAI row corrected to the `authorization` field; Phase-1 reachability via static bearer is unchanged. §17 records the locked decisions; the validation header notes the review pass.
2026-06-16 17:34:00 +02:00
`403`; `MCP-Protocol-Version``400` on unsupported, default `2025-03-26` when absent.
The one thing rmcp does **not** give for free is fail-closed Origin: rmcp checks
`Origin` only when `allowed_origins` is non-empty, so an empty list is *fail-open*.
`origin_guard` (above) closes that — a present, disallowed `Origin``403` regardless
of rmcp's empty-list behavior. That layer is the only added middleware.
**Host/Origin policy is fail-closed by construction, derived from the deployment.**
rmcp's default `allowed_hosts` is loopback-only — correct for local dev (DNS-rebinding
defense) but it would `403` every remote client. `McpHostPolicy::from_bind` (the single
constructor) computes both axes once at startup from `--bind` + config: loopback bind →
loopback Host allow-list + `OriginPolicy::Unchecked` (dev convenience); non-loopback
bind → the configured public host(s) (else Host-allowlisting disabled, logged — bearer
is the real control), and **`OriginPolicy::DenyBrowsers` by default** (any present
`Origin``403`) unless `browser_origins` are configured (`OriginPolicy::Allow`). The
key by-design property: `OriginPolicy` has **no "absent ⇒ skip" state** and there is no
other way to build the policy, so a remote deployment cannot accidentally run fail-open
— closing the bug class rather than flipping a default. Non-browser MCP clients (the
Phase-1 tier) send no `Origin` and are unaffected; only a forged browser `Origin` is
rejected.
## 8. Auth & identity — `Reuses` the server's middleware
The backend consumes an already-resolved actor and **branches on nothing** about how
the token was verified. Two values are injected into the request extensions by
middleware that runs **before** the MCP service:
```rust
// Reuses — crates/omnigraph-server/src/identity.rs:186
pub struct ResolvedActor { pub actor_id: Arc<str>, pub tenant_id: Option<TenantId>, pub scopes: Vec<Scope>, pub source: AuthSource }
// Reuses — crates/omnigraph-server/src/registry.rs:37
pub struct GraphHandle {
pub key: GraphKey, pub uri: String,
pub engine: Arc<Omnigraph>,
pub policy: Option<Arc<PolicyEngine>>, // None ⇒ no per-graph Cedar gate
pub queries: Option<Arc<QueryRegistry>>, // None ⇒ no stored queries for this graph
}
```
The middleware order is fixed in `build_app` (`lib.rs:876`; the two `route_layer`s at
`lib.rs:929-936`): the **outer** layer `require_bearer_auth` injects
`Extension<ResolvedActor>` (or `401`); the **inner** layer `resolve_graph_handle`
injects `Extension<Arc<GraphHandle>>`. Both land in `request.extensions()`, which rmcp
copies into `RequestContext.extensions`.
```rust
// New — crates/omnigraph-server/src/mcp/mod.rs
#[derive(Clone)]
pub struct OmnigraphMcpBackend { state: AppState } // AppState is Arc-backed #[derive(Clone)]
impl OmnigraphMcpBackend {
fn ctx<'a>(&self, parts: &'a http::request::Parts) -> Result<(&'a ResolvedActor, &'a Arc<GraphHandle>), McpError> {
let actor = parts.extensions.get::<ResolvedActor>()
.ok_or_else(|| McpError::internal_error("actor missing from request extensions", None))?;
let handle = parts.extensions.get::<Arc<GraphHandle>>()
.ok_or_else(|| McpError::internal_error("graph handle missing from request extensions", None))?;
Ok((actor, handle))
}
}
```
**Auth posture (spec-aligned, MCP 2025-11-25 authorization).** The server is a
Resource Server. Per-request validation only — **sessions are never used for
authentication** (the transport is stateless, which makes this structural). Token
**audience must be validated** and **token passthrough is prohibited**: if a tool
later needs to reach an upstream API, the server acts as a separate OAuth client and
must not forward the client's token.
- **Static bearer (today).** `require_bearer_auth` resolves a `ResolvedActor` from a
SHA-256 hash match. Works for the developer/agent clients (§13).
- **OAuth 2.1 + RFC 9728 (additive, MR-956).** Serve
`/.well-known/oauth-protected-resource`; on `401`, optionally add
`WWW-Authenticate: Bearer resource_metadata="…"` (header is optional in 2025-11-25
given the well-known fallback). Clients run OAuth 2.1 + PKCE + RFC 8707 resource
indicators themselves; the server validates audience-bound JWTs offline (cached
JWKS), so on-prem/air-gapped keeps working. This swaps the bearer middleware behind
a `TokenVerifier` and changes **zero** MCP code.
> **Compatibility caveat to honor (Claude Code issue #59467).** Advertising RFC-9728
> Protected-Resource-Metadata can cause some clients (Claude Code today) to **ignore
> a static `Authorization` header and force the OAuth flow**. So PRM advertisement
> must be **config-gated**: a deployment serving developer clients over static bearer
> does not advertise OAuth; a deployment targeting consumer connectors does. The MCP
> routes only need to flow through the standard `401` path so the hook can be added
> without touching MCP code.
## 9. Stored-query projection
Stored-query registry foundation + config/CLI RFC-002 (#128) * MR-969: add stored-query registry config surface Introduce the `queries:` block in omnigraph.yaml — an inline `name -> entry` map of stored queries, per-graph (`graphs.<id>.queries`) and top-level for single-graph mode, mirroring how `policy` is wired in both modes. Each entry points at a `.gq` file and carries optional MCP exposure settings (`expose`, `tool_name`), defaulting to not-exposed. Additive: absent `queries:` leaves current behavior unchanged. - QueryEntry { file, mcp: McpSettings { expose, tool_name } } - `queries` field on TargetConfig + OmnigraphConfig (serde default) - query_entries() / target_query_entries() accessors - resolve_query_file() — base_dir-relative `.gq` path resolution - round-trip + absent-block tests Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add stored-query registry loader and GraphHandle wiring Add a `queries` module: QueryRegistry loads each declared `.gq` entry, parses it, and selects the query whose symbol matches the manifest key, asserting the two agree (key == `query <name>` symbol). Identity is the query name; a key/symbol mismatch is a load-time error. Errors are collected, not fail-fast, so a bad registry surfaces every broken entry at once. Schema type-checking is deliberately left to a separate pass so the loader stays callable without an open engine. Thread an `Option<Arc<QueryRegistry>>` through GraphHandle alongside the per-graph policy; the URI-canonicalizing clone propagates it. Production openers default to None for now — the boot path loads and attaches the registry in a later change. - QueryRegistry::{from_specs, load, lookup, iter}; StoredQuery::is_mutation - GraphHandle.queries field, propagated on canonical clone - registry unit tests: identity match/mismatch, multi-query selection, per-entry parse errors, error collection, mutation classification Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: add RFC-002 config & CLI architecture Layered config (user-global ~/.config/omnigraph/ + per-project), a unifying `target` abstraction resolving to (locus, graph, sub-state, credential) with embedded-URI XOR remote-server loci, multi-server × multi-graph client targeting, credentials by-reference, and the file-naming decision: project and server config are one artifact (`omnigraph.yaml`); the only differently-named file is the user-global `config.yaml`, split by scope not role. Includes the 12-factor bind portability rule (prefer --bind/OMNIGRAPH_BIND over a committed server.bind) and the defined-locally / invoked-remotely model for stored queries. Derived from first principles working backwards from what the engine enables; validated against kube/Helix/git/compose. Linked from docs/dev/index.md. Proposed; phased rollout for the MR-973/974/981 family. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add check() to validate stored queries against the live schema A pure check(registry, catalog) that type-checks every stored query via the same typecheck_query_decl the engine runs for inline queries — no parallel implementation. Failures are collected, not fail-fast, so an operator sees every broken query (e.g. a type/property a migration renamed or removed) in one pass. Breakages are fatal (the boot path will refuse to start); warnings are advisory. Pure over (registry, catalog) so it is callable both at boot (engine catalog) and offline from the CLI without an open engine. Advisory lint: an mcp.expose:true query that declares a Vector(N) parameter warns — an LLM cannot supply a raw embedding vector; such a query should take a String parameter and embed server-side. Warns rather than rejects, since service-to-service callers may pass vectors. - CheckReport { breakages, warnings }; has_breakages / is_clean - tests: valid query, unknown type, unknown property, collect-not-fail-fast, vector-param-exposed warns, unexposed silent Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Drop internal plan-label refs from stored-query config comments Doc comments referenced sequencing labels ("C2") that mean nothing to a reader; reword to describe the behavior directly. Comment-only. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile aliases with the role model in RFC-002 Place the existing client-only `aliases:` block in the client/server role split: aliases are client-role (CLI, embedded, ungated) and may live in both user-global and project config; `queries:` is server-role (deployment manifest only). They overlap as "name -> .gq"; `queries:` is the superset, and the end-state subsumes aliases (definition -> queries, target/branch/format -> client invocation context, positional args -> CLI sugar). v1 keeps aliases unchanged. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: make RFC-002 config global-first, project-optional The global user config is the primary, self-sufficient default; the CLI works from any directory with no project file (the kubectl/aws/gh posture), a deliberate flip from today's project-anchored behavior. The project omnigraph.yaml becomes an optional repo-scoped override and the deployment manifest. Uniform schema, both layers optional; global can hold any section including a personal server's graphs/queries. Additive: project still overrides global; the flip adds a fallback layer below the project file rather than removing it. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: justify XDG ~/.config/omnigraph over legacy ~/.omnigraph in RFC-002 Make the rationale explicit: XDG-first because OmniGraph is a client that will cache remote catalogs and keep session state alongside secrets, and XDG separates config / cache / state into distinct dirs (clear cache without touching creds; backups skip cache) whereas a single ~/.omnigraph/ mixes them. Honor ~/.omnigraph/ as a fallback for the peer-group (aws/kube/docker/helix) expectation. Add XDG_CACHE_HOME / XDG_STATE_HOME to the override precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: build RFC-002 credentials on the existing env-file mechanism OmniGraph already has credentials-by-reference: bearer_token_env names the env var, and auth.env_file is a git-ignored dotenv the CLI auto-loads (real env vars win), resolved via resolve_remote_bearer_token. The RFC's proposed credentials.yaml + token_env were redundant parallel inventions. Reconcile: reuse bearer_token_env (extend to servers.<name>) and auth.env_file (add a global ~/.config/omnigraph/.env layered under the project .env.omni); OS keychain is an additive future resolver. No new credentials.yaml. Updated summary, non-goals, background, file-naming, credentials, example, login, migration, rollout. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: use single ~/.omnigraph dir (Helix-style), not XDG, in RFC-002 Reverse the earlier XDG-first call. The prior argument rested on a false dichotomy (single-dir => mixed config/cache/state); in fact the peer tools (aws, kube, helix) achieve separation via SUBDIRECTORIES inside one ~/.tool/ dir (~/.aws/sso/cache/, ~/.kube/cache/), getting cache hygiene AND one discoverable place. So everything goes under ~/.omnigraph/: config.yaml, credentials (dotenv, 0600), cache/, state/. Lower cognitive load, matches what DB/cloud-CLI users expect, matches Helix. OMNIGRAPH_HOME overrides; $XDG_CONFIG_HOME optionally honored but ~/.omnigraph/ is canonical. Updated all paths, the rationale paragraph, the file-naming table (added a cache/state row), and env precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile RFC-002 with shipped/planned CLI tickets Align with reality found in existing tickets: - Noun is graph/graphs, not target/targets (MR-603 done renamed the config key targets->graphs, flag --graph). Use graphs:/--graph; an entry is embedded (uri) XOR remote (server + remote graph name). - ~/.omnigraph/ confirmed by MR-581 (og template pull, done) which already quick-starts templates there. - Templates already exist (MR-581/MR-531) — not invented here. - The init family is already specced (init, quickstart MR-973, serve MR-970, prune MR-972, mcp install MR-974, agent-mode MR-981); this RFC only adds the user route (~/.omnigraph/config.yaml + login). - aliases: -> operations: planned (MR-839). - bearer_token_env gap tracked in MR-971. - query lint/check already exist (MR-639) — registry validator must not collide with the singular `query check`. Add a Reconciliation section; fix the canonical example to graphs:/--graph. Also: merge semantics refined (deep-merge settings, replace named entries, replace lists, config view --resolved --show-origin). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: correct stale-ticket claims and fold init/bootstrap design into RFC-002 Verify against code, not ticket statuses (MR-581 is marked done but is stale/unbuilt): no ~/.omnigraph usage, no template/serve/quickstart/ prune/login commands exist; config still uses aliases: (no operations:). So ~/.omnigraph/ stands on peer-convention merits alone, and templates are a design question, not a foothold. Add §7.5: the three-tier init model (user route = login + ~/.omnigraph/config.yaml; thin project init; fat quickstart + templates) with first-principles positions (split init/login, in-place refuse-if-exists, interactive vs --auto/agent-mode, --template flag, secrets-on-scaffold gitignore rule). This RFC owns only the user route; the rest are sibling tickets (MR-973/970/972/974/981). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: breadboard + slice Shape A in RFC-002 Add the implementation breadboard (places P1-P5, affordances N1-N14 with NEW markers, mermaid) and five vertical slices for the selected config/ CLI/init shape: V1 global layer + merge engine + config view; V2 remote graphs + HTTP-client path + credential resolution; V3 omnigraph login; V4 init-hardening + quickstart + templates (rides MR-970); V5 agent-mode (MR-981). Rollout reordered to the slice sequence; spikes X1-X4 gate their owning slice. V1-V2 close the substantive client->server gap. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add InvokeQuery Cedar action (coarse, graph-scoped) A per-graph, branch-scoped action that gates invoking a server-side stored query by name. Coarse for now: an `invoke_query` allow rule permits any stored query on the graph; a future, additive refinement adds an optional per-query-name scope without changing rules written against the coarse action. Enforcement is at the HTTP boundary; the engine `_as` writers still enforce read/change per the query body, so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). No call site yet — the invocation handler wires it in a later change (same pattern as Admin/GraphList added ahead of consumers). - variant + as_str/resource_kind(Graph)/FromStr/uses_branch_scope - Cedar schema: invoke_query appliesTo Graph - tests: per-graph allow/deny, branch-scope accepted Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Load and type-check stored queries at server boot, refusing breakage At startup the server now loads each graph's stored-query registry, type-checks every query against that graph's live schema, and refuses to boot if any query references a type/property the schema doesn't have (same posture as bad policy YAML) — so schema drift surfaces at the deploy boundary, not silently at invocation. Non-blocking warnings are logged. The validated registry is attached to the GraphHandle (the two production sites previously held `queries: None`). Loading (parse + key==symbol identity) happens at settings-build time where the config is in scope; the schema type-check happens after each engine opens (single mode in `open_single_with_queries`, multi mode in `open_single_graph`). `open_with_bearer_tokens_and_policy` delegates with an empty registry so its 18 test callers are unchanged; the public `new_*` constructors are unchanged (only the private build path threads the registry). - ServerConfigMode::Single / GraphStartupConfig carry the loaded registry - boot tests: valid registry boots; type-broken query refuses boot + names it Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add `omnigraph queries validate` and `queries list` CLI `queries validate` type-checks the stored-query registry against the live schema offline — it opens the selected graph, runs the same check() the server runs at boot, prints breakages/warnings (human or --json), and exits non-zero on any breakage — so an operator can catch a query broken by a schema change without restarting the server. `queries list` prints each registered query's name, MCP exposure, and typed params. Named `validate` (not `check`) to avoid overlap with the existing `omnigraph lint` — `query check`/`query lint` are already deprecated argv-shims to `lint`. Registry entries resolve like the server: a named graph uses its per-graph `queries:`; otherwise the top-level one. - Queries subcommand group; reuses QueryRegistry::load + check from omnigraph-server; local-only (needs the schema), mirrors lint - tests: clean registry exits 0, broken query exits non-zero + names it, list shows the query and its typed params Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Route registry selection through one shared query_entries_for The "which queries: block applies for graph X" rule existed twice — the server boot path and the CLI's registry_entries — and had already drifted: the CLI carried an unreachable unwrap_or_else fallback the server lacked. Add OmnigraphConfig::query_entries_for(graph: Option<&str>) as the single definition (named graph -> its per-graph block; otherwise top-level) and route all three sites through it: server single mode, server multi-graph loop, and the CLI. The CLI's dead fallback arm is deleted; CLI and server now resolve identically by construction. No behavior change. Extends the config round-trip test to pin the selector, including the unknown-name -> top-level fallback the deleted CLI arm covered. * Funnel registry validation through one validate_and_attach gate The check -> refuse-on-breakage -> log-warnings -> empty->None block was copy-pasted across both open paths (single mode and the multi-graph per-graph open), differing only by the graph label. A third opener could attach a registry that was never schema-checked. Extract validate_and_attach(queries, catalog, label) -> Option<Arc<..>> as the single gate both paths call, so attaching an unchecked registry is no longer expressible. The catalog handle is an owned Arc, so calling it before the multi-mode policy match (which rebinds db) is borrow-clean. No behavior change. Adds a direct unit test of the helper (empty / clean / breakage incl. the graph label in the message) — covering the multi-graph path's logic, which previously had no boot-refusal coverage. * Resolve param types structurally in the MCP vector lint The exposed-query advisory detected vector params with type_name.starts_with("Vector(") — a second copy of the compiler's own ScalarType::from_str_name vector parsing that could drift from it. Key the lint off PropType::from_param_type_name + ScalarType::Vector(_) instead, the one canonical resolver the type system already uses. Any future param-suppliability lint now reads the structured type rather than scanning the surface string. Behavior-preserving: the grammar forbids list-of-vector params (list_type = "[" base_type "]", and base_type excludes Vector), so the only input where the structured and string checks could differ is unparseable. Adds a guard test that an exposed String param does not false-trigger the warning. * Refuse duplicate MCP tool names across exposed stored queries The effective MCP tool name (explicit tool_name, else the query name) is a second identity namespace beside the registry key, but nothing enforced it unique — two exposed queries could claim one catalog key, and each consumer re-derived the name ad hoc. Add StoredQuery::effective_tool_name() as the one definition, and a load-time uniqueness pass in from_specs over exposed queries: a collision is a collected LoadError naming the loser and the winner. Scoped to exposed queries (unexposed have no MCP tool); deterministic over the BTreeMap so the first-declared wins and the error order is stable. New (rare) refusal: a config with colliding exposed tool names now fails `omnigraph queries validate` offline and refuses server boot, the same posture as a malformed registry. Release-note-worthy. Test-first: duplicate_exposed_tool_name_is_a_load_error (red before the pass, green after) + a CLI offline test; the unexposed sibling pins the exposed-only scope; effective_tool_name asserts folded into the load test. * docs: document the queries registry, CLI, and invoke_query action The stored-query surface shipped without user docs. Add it, per the same-PR maintenance contract: - policy.md: invoke_query as per-graph action #10 (branch-scoped), with the double-gating note; renumber graph_list; add it to the branch_scope list. - cli-reference.md: the `queries validate | list` command, and the `queries:` config block (per-graph + top-level) with mcp.expose/tool_name and the tool-name uniqueness rule. - server.md: boot-time stored-query type-check (refuse on breakage), noting invocation over HTTP/MCP is not yet exposed. * Add POST /queries/{name} stored-query invocation handler Invoke a curated server-side stored query by name: source + name come from the per-graph queries: registry, the client sends only runtime inputs (params, branch, snapshot). Gated by the invoke_query Cedar action at the boundary; the handler delegates to the existing run_query/run_mutate, whose inner Read/Change enforce still runs — so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). - InvokeStoredQueryRequest + an untagged InvokeStoredQueryResponse { Read(ReadOutput), Change(ChangeOutput) } → one Json<_> return type and a oneOf 200 schema (a correct contract, not a wrong-but-simple one). - Route lives in per_graph_protected → single-mode /queries/{name} and multi-mode /graphs/{id}/queries/{name} for free. - Deny == unknown: an invoke_query denial and a missing query both return the same 404, so the catalog can't be probed by an unauthorized caller. - OpenAPI regenerated; tests cover read, mutation double-gate (403 vs 200), bad-param 400, and the identical-404 deny path. Completes the MR-969 V1 invocation slice (registry + /queries/{name} + invoke_query). * docs: stored-query invocation endpoint; flip the not-yet-exposed caveat Now that POST /queries/{name} ships (C7), document it: add the endpoint to server.md's inventory + an invocation section (body, untagged read/mutate envelope, invoke_query gate, double-gated mutations, deny == 404), and flip the startup note that said invocation was not yet exposed. In policy.md, replace "no invocation call site yet" on the invoke_query action with a pointer to the endpoint. * Scope the stored-query 404-hiding claim to non-invoke_query callers Review found the deny==404 catalog-hiding was overstated as a contract: it holds only at the outer invoke_query gate. A caller that HOLDS invoke_query but lacks read/change gets the inner gate's 403 for an existing query vs 404 for an unknown one — so existence is visible to grant-holders by design (the intended double-gate). The handler docstring, OpenAPI 404 description, and server.md all claimed the 404 was airtight against any denied actor. Correct the wording in all three (no behavior change) and add the missing symmetric test (invoke_query but no read -> 403 for an existing query, 404 for unknown) so the actual contract is pinned. Also document that in default-deny mode (tokens, no policy) every invocation 404s until an invoke_query rule is configured. Nits: the from_specs collision comment said "first declared wins" but it is lexicographically-first by name (BTreeMap); the effective_tool_name docstring overclaimed the CLI display routes through it (it resolves the rule on its own output DTO). * Default mcp.expose to true (the manifest entry is the opt-in) expose controls MCP-catalog membership only — it is not an authorization gate (invocation is gated by invoke_query regardless). So requiring a per-query mcp.expose: true was friction with no safety benefit: a non-exposed query is still HTTP-invocable by name. Flip the default so declaring a query in the manifest exposes it to the agent tool catalog by default; expose: false is the escape hatch for service-only queries. Both the absent-mcp path (Default impl) and the present-but-no-expose path (serde default fn) now yield true. Doc comments + cli-reference updated; the config round-trip test asserts the new default. * Add GET /queries stored-query catalog endpoint List a graph's mcp.expose stored queries as a typed tool catalog so a client (the MCP server) can register them as tools without fetching .gq source. Each entry carries name, MCP tool_name, description/instruction, a read/mutate flag, and decomposed typed params (kind enum: string|bool|int| bigint|float|date|datetime|blob|vector|list, plus item_kind for lists and vector_dim) — so the consumer builds an input schema with a closed match and never re-parses omnigraph type spelling. I64/U64 are bigint (string on the wire): a JSON number loses precision past 2^53 and the engine already accepts decimal strings. Read-gated (works in default-deny; the catalog is graph-wide, authorized against main). NOT Cedar-filtered per query yet — a reader can list a query whose invoke_query they lack (documented gap until per-query authz lands); invocation stays invoke_query-gated + deny==404. - api: QueriesCatalogOutput / QueryCatalogEntry / ParamDescriptor / ParamKind + query_catalog_entry (reuses PropType::from_param_type_name; scalar_kind is exhaustive, so a new ScalarType is a compile error here until catalogued). - GET /queries route in per_graph_protected (→ /graphs/{id}/queries in multi mode); OpenAPI regenerated; path allowlists updated. - Tests: projection unit (every kind, list, vector, nullable, mutation, empty) + handler (exposed-only filter, read-gate probe-oracle, empty registry). * docs: GET /queries stored-query catalog endpoint Document the catalog: the endpoint table row (GET /queries, read-gated), a catalog section (typed-param kind enum, bigint/date/datetime/blob-as-string, graph-wide/branch-independent, mcp.expose default true, the read-gated probe-oracle gap), and flip the startup note now that the catalog ships. * Collect file-I/O and parse errors in QueryRegistry::load in one pass load() early-returned on any unreadable .gq file, masking parse / identity / tool-name-collision errors in the OTHER (readable) files — so an operator fixed the missing file, restarted, and only then saw the next broken query. Now it collects I/O errors but still runs from_specs on the readable specs and returns the union, so every broken entry surfaces at once (matching the collected-errors contract the rest of the registry already follows). Safe: from_specs' tool-name collision check runs over loaded queries only, so dropping an I/O-failed entry can only under-report a collision, never invent one. I/O errors are ordered first (BTreeMap key order), then spec errors. Adds a load-level test (tempdir: a valid, a missing, and a parse-broken .gq) asserting all three surface in one Err — confirmed red before the fix. * Make invoke_query graph-scoped (one branch authority) invoke_query gates reaching the curated stored-query surface — a graph-level capability. Per-branch/snapshot access is already enforced by the inner read/change gate in run_query/run_mutate (authorized against the resolved branch), so branch-scoping the outer gate was redundant AND wrong for snapshot reads (it defaulted to main). Drop the branch dimension: remove InvokeQuery from uses_branch_scope (it joins admin as graph-scoped) and authorize the boundary gate with branch: None. Lossless: an actor confined to branch X by their read/change rules can still only invoke a stored query that touches X. A rule that sets branch_scope on invoke_query is now rejected by validate() — write invoke_query in its own rule. Ripple (atomic): restructure the server invoke fixture so invoke_query sits in its own branch_scope-free rule; invert invoke_query_is_branch_scoped -> invoke_query_rejects_branch_scope; the per-graph authorize test uses branch: None; docs (policy.md, server.md, the InvokeQuery doc). No wire/OpenAPI change. * Resolve graph config by identity, not server mode Which policy/queries block applies for a graph was decided three different, mode-dependent ways: single-mode boot used top-level even for a named graph; multi-mode used per-graph (and silently ignored a top-level queries block); the CLI used per-graph for a named target. So `queries validate --target prod` could check a different registry than the single-mode server loaded, and a named graph's per-graph policy/queries were silently shadowed. Make config a function of graph IDENTITY: a graph served by NAME (--target/server.graph, a graphs: entry) uses its own graphs.<name>.{policy, queries}; a bare URI is anonymous and uses top-level. One rule, applied by single-mode boot, multi-mode boot, and the CLI — so they can't diverge and the CLI predicts the server exactly. No silent ignore: serving a named graph while a top-level policy/queries block is populated now refuses boot, naming the block (the multi-mode top-level-policy bail, extended to queries and to single-mode-named). The CLI's `queries validate` derives the schema URI and the registry from ONE selection, and a positional URI forces anonymous (ignoring cli.graph) so the two can't come from different graphs. BREAKING (released behavior): single mode by name (--target/server.graph) with top-level policy/queries previously used top-level; it now uses the per-graph block and refuses boot if top-level is also populated. Bare-URI single mode is unchanged. Loud, with migration text pointing at graphs.<name>. - config: resolve_policy_file_for (policy sibling of query_entries_for, no top-level fallback) + populated_top_level_blocks for the coherence check. - characterization tests (single-mode named -> per-graph; named + top-level -> bail; multi-mode top-level queries -> bail; CLI positional-URI -> top-level). - docs: policy.md, server.md, cli-reference.md. * docs: RFC-002 credentials keyed by server name (keychain/profile/env) Reworks the RFC's credentials model: secrets are keyed by server name — OS keychain `omnigraph:<server>` (preferred) -> a `[<server>]` profile in `~/.omnigraph/credentials` -> `OMNIGRAPH_TOKEN[_<SERVER>]` env (CI), the AWS/gh/kube model. `servers.<name>` is endpoint-only by default but may carry an explicit, secret-free `auth: { token: { env|file|command|keychain } }` source. The shipped `bearer_token_env` + `.env.omni` dotenv remain a legacy compat path; no `credentials.yaml`. * docs: RFC-002 — typed graph locator (storage/server/graph_id), not a uri string Add §1.1: the resolved graph address is a typed GraphLocator (Embedded{storage} | Remote{server, graph_id}), not a flat uri: String. Diagnoses the string model's cost in the code today (~16 is_remote_uri forks, TargetConfig can't express multi-server x multi-graph, the CLI bails on remote, the ts SDK models baseUrl+graphId separately) and settles the YAML naming so the key names the locus: - storage: (embedded) — shipped uri: is a deprecated alias - server: + graph_id: (remote) — graph_id defaults to the entry key - storage xor server, reject both/neither (no silent ambiguity) Kills the graphs:/graph: collision and the uri:-might-be-a-server ambiguity. Updates the §1/§8 examples and the entry-shape notes to the new naming. * Test: queries list must reject an unknown --target queries list opens no graph URI, so unknown-graph validation does not ride along on resolve_target_uri the way it does for every other command. The new test reproduces the gap: with an unknown --target the command currently exits 0 and prints the (empty) top-level registry instead of erroring like the URI-resolving commands do. Fails against current code; the fix follows. * Validate the graph selection in queries list Graph-existence validation was a side effect of URI resolution: every URI-resolving command rejects an unknown --target via resolve_target_uri, but queries list opens no URI, so query_entries_for(Some(unknown)) silently fell back to the top-level registry and showed the wrong (or empty) catalog. Make membership a property of the selection: add the fallible resolve_graph_selection alongside the infallible query_entries_for (a known name passes through, an unknown name errors with the same message as resolve_target_uri, None stays anonymous), and validate the selection in execute_queries_list. query_entries_for is unchanged — server boot's bare-URI path still needs its None -> top-level arm. * Surface policy-engine errors from stored-query invoke The invoke handler mapped every authorize_request failure to 404 ('stored query not found'), which collapsed the authorization decision (deny -> 403) together with operational failures (no actor -> 401, Cedar evaluation error -> 500). A real policy-engine 500 was hidden as a missing query. Separate the two concerns instead of sniffing the masked status. Extract authorize() returning an Authz { Allowed, Denied(msg) } decision and reserve Err for operational failures only; authorize_request becomes a thin wrapper that maps Denied -> 403, so the 16 deny-as-403 callers are unchanged. The invoke handler now matches the decision directly: a denial stays 404 (deny == missing, so the catalog can't be probed without the grant), while a 401/500 propagates with its true status. 500 is now a reachable outcome on POST /queries/{name}; document it in the endpoint responses and regenerate openapi.json. * Extract the named-graph/top-level coherence rule into one helper The rule 'a named graph uses its own graphs.<name> block, so a populated top-level block is a config error' lived inline in single-mode server boot. Extract it to OmnigraphConfig::ensure_top_level_blocks_honored so the same definition can be shared by the CLI selection gate (next commit) and the two can't drift. Boot calls the helper; the message is reworded context-neutral (drops 'serving') so it reads correctly from both boot and the CLI. Behavior-preserving: multi-graph mode keeps its own unconditional check, and single_mode_named_graph_rejects_top_level_blocks still passes. * Test: queries validate/list must reject a named graph with a top-level block Server boot refuses a config where a graph is selected by name yet a top-level queries:/policy.file block is populated (the block would be silently ignored). The CLI's queries validate/list resolve the same named selection but skip that coherence check, so they give a false green / list the per-graph block. The new test reproduces it: validate prints OK and list succeeds where boot would refuse. Fails against current code; the fix follows. * Enforce top-level coherence in the single CLI selection gate queries validate validated graph membership only as a side effect of URI resolution and queries list only via resolve_graph_selection's membership check; neither applied the named-graph/top-level coherence rule server boot enforces, so both gave a false green on a config boot refuses. Fold ensure_top_level_blocks_honored into resolve_graph_selection so it is the single gate that returns only valid + server-coherent selections, and route resolve_selected_graph (queries validate) through it; queries list already calls the gate. A named graph with a populated top-level block now errors in both commands, matching boot. A positional URI stays anonymous (top-level honored), so queries_validate_positional_uri_ignores_default_graph is unaffected. * docs: RFC-003 — MCP server surface for omnigraph-server Detailed MCP-transport design for the stored-query/MCP work, building on the shipped #128 registry. Corrects the draft against the branch head: the coarse invoke_query gate + 404 denial-masking are already wired (server_invoke_query), so per-query invoke_query scope (PolicyRequest has no query-name dimension yet) is the real prerequisite; positions the doc as superseding rfc-001's MCP transport (/mcp/tools+/mcp/invoke) and reconciles the shipped mcp.expose YAML form and the schema-introspection non-goal; grounds the parity surface in the actual omnigraph-ts package (13 tools with read/change ids, 2 resources). * docs(config): clarify graph config boundaries * fix(config): enforce graph-scoped policies and query validation * fix(cli): require graph selection for scoped query registries * fix(server): preserve named graph id in single mode policy * fix(cli): share graph identity for policy resolution * test(cli): cover policy tooling server graph selection * fix(cli): honor server graph for policy tooling --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-01 22:50:31 +02:00
The projection source is the same `query_catalog_entry` the `GET /queries` catalog
uses (`crates/omnigraph-server/src/api.rs:13`). The param/catalog DTOs moved to the
shared `omnigraph-api-types` crate (RFC-009 Phase 2) and are re-exported through
`api.rs` (`pub use omnigraph_api_types::*`), so the `Reuses` types below still resolve
via `omnigraph_server::api::…`. Real types:
Stored-query registry foundation + config/CLI RFC-002 (#128) * MR-969: add stored-query registry config surface Introduce the `queries:` block in omnigraph.yaml — an inline `name -> entry` map of stored queries, per-graph (`graphs.<id>.queries`) and top-level for single-graph mode, mirroring how `policy` is wired in both modes. Each entry points at a `.gq` file and carries optional MCP exposure settings (`expose`, `tool_name`), defaulting to not-exposed. Additive: absent `queries:` leaves current behavior unchanged. - QueryEntry { file, mcp: McpSettings { expose, tool_name } } - `queries` field on TargetConfig + OmnigraphConfig (serde default) - query_entries() / target_query_entries() accessors - resolve_query_file() — base_dir-relative `.gq` path resolution - round-trip + absent-block tests Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add stored-query registry loader and GraphHandle wiring Add a `queries` module: QueryRegistry loads each declared `.gq` entry, parses it, and selects the query whose symbol matches the manifest key, asserting the two agree (key == `query <name>` symbol). Identity is the query name; a key/symbol mismatch is a load-time error. Errors are collected, not fail-fast, so a bad registry surfaces every broken entry at once. Schema type-checking is deliberately left to a separate pass so the loader stays callable without an open engine. Thread an `Option<Arc<QueryRegistry>>` through GraphHandle alongside the per-graph policy; the URI-canonicalizing clone propagates it. Production openers default to None for now — the boot path loads and attaches the registry in a later change. - QueryRegistry::{from_specs, load, lookup, iter}; StoredQuery::is_mutation - GraphHandle.queries field, propagated on canonical clone - registry unit tests: identity match/mismatch, multi-query selection, per-entry parse errors, error collection, mutation classification Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: add RFC-002 config & CLI architecture Layered config (user-global ~/.config/omnigraph/ + per-project), a unifying `target` abstraction resolving to (locus, graph, sub-state, credential) with embedded-URI XOR remote-server loci, multi-server × multi-graph client targeting, credentials by-reference, and the file-naming decision: project and server config are one artifact (`omnigraph.yaml`); the only differently-named file is the user-global `config.yaml`, split by scope not role. Includes the 12-factor bind portability rule (prefer --bind/OMNIGRAPH_BIND over a committed server.bind) and the defined-locally / invoked-remotely model for stored queries. Derived from first principles working backwards from what the engine enables; validated against kube/Helix/git/compose. Linked from docs/dev/index.md. Proposed; phased rollout for the MR-973/974/981 family. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add check() to validate stored queries against the live schema A pure check(registry, catalog) that type-checks every stored query via the same typecheck_query_decl the engine runs for inline queries — no parallel implementation. Failures are collected, not fail-fast, so an operator sees every broken query (e.g. a type/property a migration renamed or removed) in one pass. Breakages are fatal (the boot path will refuse to start); warnings are advisory. Pure over (registry, catalog) so it is callable both at boot (engine catalog) and offline from the CLI without an open engine. Advisory lint: an mcp.expose:true query that declares a Vector(N) parameter warns — an LLM cannot supply a raw embedding vector; such a query should take a String parameter and embed server-side. Warns rather than rejects, since service-to-service callers may pass vectors. - CheckReport { breakages, warnings }; has_breakages / is_clean - tests: valid query, unknown type, unknown property, collect-not-fail-fast, vector-param-exposed warns, unexposed silent Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Drop internal plan-label refs from stored-query config comments Doc comments referenced sequencing labels ("C2") that mean nothing to a reader; reword to describe the behavior directly. Comment-only. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile aliases with the role model in RFC-002 Place the existing client-only `aliases:` block in the client/server role split: aliases are client-role (CLI, embedded, ungated) and may live in both user-global and project config; `queries:` is server-role (deployment manifest only). They overlap as "name -> .gq"; `queries:` is the superset, and the end-state subsumes aliases (definition -> queries, target/branch/format -> client invocation context, positional args -> CLI sugar). v1 keeps aliases unchanged. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: make RFC-002 config global-first, project-optional The global user config is the primary, self-sufficient default; the CLI works from any directory with no project file (the kubectl/aws/gh posture), a deliberate flip from today's project-anchored behavior. The project omnigraph.yaml becomes an optional repo-scoped override and the deployment manifest. Uniform schema, both layers optional; global can hold any section including a personal server's graphs/queries. Additive: project still overrides global; the flip adds a fallback layer below the project file rather than removing it. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: justify XDG ~/.config/omnigraph over legacy ~/.omnigraph in RFC-002 Make the rationale explicit: XDG-first because OmniGraph is a client that will cache remote catalogs and keep session state alongside secrets, and XDG separates config / cache / state into distinct dirs (clear cache without touching creds; backups skip cache) whereas a single ~/.omnigraph/ mixes them. Honor ~/.omnigraph/ as a fallback for the peer-group (aws/kube/docker/helix) expectation. Add XDG_CACHE_HOME / XDG_STATE_HOME to the override precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: build RFC-002 credentials on the existing env-file mechanism OmniGraph already has credentials-by-reference: bearer_token_env names the env var, and auth.env_file is a git-ignored dotenv the CLI auto-loads (real env vars win), resolved via resolve_remote_bearer_token. The RFC's proposed credentials.yaml + token_env were redundant parallel inventions. Reconcile: reuse bearer_token_env (extend to servers.<name>) and auth.env_file (add a global ~/.config/omnigraph/.env layered under the project .env.omni); OS keychain is an additive future resolver. No new credentials.yaml. Updated summary, non-goals, background, file-naming, credentials, example, login, migration, rollout. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: use single ~/.omnigraph dir (Helix-style), not XDG, in RFC-002 Reverse the earlier XDG-first call. The prior argument rested on a false dichotomy (single-dir => mixed config/cache/state); in fact the peer tools (aws, kube, helix) achieve separation via SUBDIRECTORIES inside one ~/.tool/ dir (~/.aws/sso/cache/, ~/.kube/cache/), getting cache hygiene AND one discoverable place. So everything goes under ~/.omnigraph/: config.yaml, credentials (dotenv, 0600), cache/, state/. Lower cognitive load, matches what DB/cloud-CLI users expect, matches Helix. OMNIGRAPH_HOME overrides; $XDG_CONFIG_HOME optionally honored but ~/.omnigraph/ is canonical. Updated all paths, the rationale paragraph, the file-naming table (added a cache/state row), and env precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile RFC-002 with shipped/planned CLI tickets Align with reality found in existing tickets: - Noun is graph/graphs, not target/targets (MR-603 done renamed the config key targets->graphs, flag --graph). Use graphs:/--graph; an entry is embedded (uri) XOR remote (server + remote graph name). - ~/.omnigraph/ confirmed by MR-581 (og template pull, done) which already quick-starts templates there. - Templates already exist (MR-581/MR-531) — not invented here. - The init family is already specced (init, quickstart MR-973, serve MR-970, prune MR-972, mcp install MR-974, agent-mode MR-981); this RFC only adds the user route (~/.omnigraph/config.yaml + login). - aliases: -> operations: planned (MR-839). - bearer_token_env gap tracked in MR-971. - query lint/check already exist (MR-639) — registry validator must not collide with the singular `query check`. Add a Reconciliation section; fix the canonical example to graphs:/--graph. Also: merge semantics refined (deep-merge settings, replace named entries, replace lists, config view --resolved --show-origin). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: correct stale-ticket claims and fold init/bootstrap design into RFC-002 Verify against code, not ticket statuses (MR-581 is marked done but is stale/unbuilt): no ~/.omnigraph usage, no template/serve/quickstart/ prune/login commands exist; config still uses aliases: (no operations:). So ~/.omnigraph/ stands on peer-convention merits alone, and templates are a design question, not a foothold. Add §7.5: the three-tier init model (user route = login + ~/.omnigraph/config.yaml; thin project init; fat quickstart + templates) with first-principles positions (split init/login, in-place refuse-if-exists, interactive vs --auto/agent-mode, --template flag, secrets-on-scaffold gitignore rule). This RFC owns only the user route; the rest are sibling tickets (MR-973/970/972/974/981). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: breadboard + slice Shape A in RFC-002 Add the implementation breadboard (places P1-P5, affordances N1-N14 with NEW markers, mermaid) and five vertical slices for the selected config/ CLI/init shape: V1 global layer + merge engine + config view; V2 remote graphs + HTTP-client path + credential resolution; V3 omnigraph login; V4 init-hardening + quickstart + templates (rides MR-970); V5 agent-mode (MR-981). Rollout reordered to the slice sequence; spikes X1-X4 gate their owning slice. V1-V2 close the substantive client->server gap. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add InvokeQuery Cedar action (coarse, graph-scoped) A per-graph, branch-scoped action that gates invoking a server-side stored query by name. Coarse for now: an `invoke_query` allow rule permits any stored query on the graph; a future, additive refinement adds an optional per-query-name scope without changing rules written against the coarse action. Enforcement is at the HTTP boundary; the engine `_as` writers still enforce read/change per the query body, so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). No call site yet — the invocation handler wires it in a later change (same pattern as Admin/GraphList added ahead of consumers). - variant + as_str/resource_kind(Graph)/FromStr/uses_branch_scope - Cedar schema: invoke_query appliesTo Graph - tests: per-graph allow/deny, branch-scope accepted Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Load and type-check stored queries at server boot, refusing breakage At startup the server now loads each graph's stored-query registry, type-checks every query against that graph's live schema, and refuses to boot if any query references a type/property the schema doesn't have (same posture as bad policy YAML) — so schema drift surfaces at the deploy boundary, not silently at invocation. Non-blocking warnings are logged. The validated registry is attached to the GraphHandle (the two production sites previously held `queries: None`). Loading (parse + key==symbol identity) happens at settings-build time where the config is in scope; the schema type-check happens after each engine opens (single mode in `open_single_with_queries`, multi mode in `open_single_graph`). `open_with_bearer_tokens_and_policy` delegates with an empty registry so its 18 test callers are unchanged; the public `new_*` constructors are unchanged (only the private build path threads the registry). - ServerConfigMode::Single / GraphStartupConfig carry the loaded registry - boot tests: valid registry boots; type-broken query refuses boot + names it Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add `omnigraph queries validate` and `queries list` CLI `queries validate` type-checks the stored-query registry against the live schema offline — it opens the selected graph, runs the same check() the server runs at boot, prints breakages/warnings (human or --json), and exits non-zero on any breakage — so an operator can catch a query broken by a schema change without restarting the server. `queries list` prints each registered query's name, MCP exposure, and typed params. Named `validate` (not `check`) to avoid overlap with the existing `omnigraph lint` — `query check`/`query lint` are already deprecated argv-shims to `lint`. Registry entries resolve like the server: a named graph uses its per-graph `queries:`; otherwise the top-level one. - Queries subcommand group; reuses QueryRegistry::load + check from omnigraph-server; local-only (needs the schema), mirrors lint - tests: clean registry exits 0, broken query exits non-zero + names it, list shows the query and its typed params Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Route registry selection through one shared query_entries_for The "which queries: block applies for graph X" rule existed twice — the server boot path and the CLI's registry_entries — and had already drifted: the CLI carried an unreachable unwrap_or_else fallback the server lacked. Add OmnigraphConfig::query_entries_for(graph: Option<&str>) as the single definition (named graph -> its per-graph block; otherwise top-level) and route all three sites through it: server single mode, server multi-graph loop, and the CLI. The CLI's dead fallback arm is deleted; CLI and server now resolve identically by construction. No behavior change. Extends the config round-trip test to pin the selector, including the unknown-name -> top-level fallback the deleted CLI arm covered. * Funnel registry validation through one validate_and_attach gate The check -> refuse-on-breakage -> log-warnings -> empty->None block was copy-pasted across both open paths (single mode and the multi-graph per-graph open), differing only by the graph label. A third opener could attach a registry that was never schema-checked. Extract validate_and_attach(queries, catalog, label) -> Option<Arc<..>> as the single gate both paths call, so attaching an unchecked registry is no longer expressible. The catalog handle is an owned Arc, so calling it before the multi-mode policy match (which rebinds db) is borrow-clean. No behavior change. Adds a direct unit test of the helper (empty / clean / breakage incl. the graph label in the message) — covering the multi-graph path's logic, which previously had no boot-refusal coverage. * Resolve param types structurally in the MCP vector lint The exposed-query advisory detected vector params with type_name.starts_with("Vector(") — a second copy of the compiler's own ScalarType::from_str_name vector parsing that could drift from it. Key the lint off PropType::from_param_type_name + ScalarType::Vector(_) instead, the one canonical resolver the type system already uses. Any future param-suppliability lint now reads the structured type rather than scanning the surface string. Behavior-preserving: the grammar forbids list-of-vector params (list_type = "[" base_type "]", and base_type excludes Vector), so the only input where the structured and string checks could differ is unparseable. Adds a guard test that an exposed String param does not false-trigger the warning. * Refuse duplicate MCP tool names across exposed stored queries The effective MCP tool name (explicit tool_name, else the query name) is a second identity namespace beside the registry key, but nothing enforced it unique — two exposed queries could claim one catalog key, and each consumer re-derived the name ad hoc. Add StoredQuery::effective_tool_name() as the one definition, and a load-time uniqueness pass in from_specs over exposed queries: a collision is a collected LoadError naming the loser and the winner. Scoped to exposed queries (unexposed have no MCP tool); deterministic over the BTreeMap so the first-declared wins and the error order is stable. New (rare) refusal: a config with colliding exposed tool names now fails `omnigraph queries validate` offline and refuses server boot, the same posture as a malformed registry. Release-note-worthy. Test-first: duplicate_exposed_tool_name_is_a_load_error (red before the pass, green after) + a CLI offline test; the unexposed sibling pins the exposed-only scope; effective_tool_name asserts folded into the load test. * docs: document the queries registry, CLI, and invoke_query action The stored-query surface shipped without user docs. Add it, per the same-PR maintenance contract: - policy.md: invoke_query as per-graph action #10 (branch-scoped), with the double-gating note; renumber graph_list; add it to the branch_scope list. - cli-reference.md: the `queries validate | list` command, and the `queries:` config block (per-graph + top-level) with mcp.expose/tool_name and the tool-name uniqueness rule. - server.md: boot-time stored-query type-check (refuse on breakage), noting invocation over HTTP/MCP is not yet exposed. * Add POST /queries/{name} stored-query invocation handler Invoke a curated server-side stored query by name: source + name come from the per-graph queries: registry, the client sends only runtime inputs (params, branch, snapshot). Gated by the invoke_query Cedar action at the boundary; the handler delegates to the existing run_query/run_mutate, whose inner Read/Change enforce still runs — so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). - InvokeStoredQueryRequest + an untagged InvokeStoredQueryResponse { Read(ReadOutput), Change(ChangeOutput) } → one Json<_> return type and a oneOf 200 schema (a correct contract, not a wrong-but-simple one). - Route lives in per_graph_protected → single-mode /queries/{name} and multi-mode /graphs/{id}/queries/{name} for free. - Deny == unknown: an invoke_query denial and a missing query both return the same 404, so the catalog can't be probed by an unauthorized caller. - OpenAPI regenerated; tests cover read, mutation double-gate (403 vs 200), bad-param 400, and the identical-404 deny path. Completes the MR-969 V1 invocation slice (registry + /queries/{name} + invoke_query). * docs: stored-query invocation endpoint; flip the not-yet-exposed caveat Now that POST /queries/{name} ships (C7), document it: add the endpoint to server.md's inventory + an invocation section (body, untagged read/mutate envelope, invoke_query gate, double-gated mutations, deny == 404), and flip the startup note that said invocation was not yet exposed. In policy.md, replace "no invocation call site yet" on the invoke_query action with a pointer to the endpoint. * Scope the stored-query 404-hiding claim to non-invoke_query callers Review found the deny==404 catalog-hiding was overstated as a contract: it holds only at the outer invoke_query gate. A caller that HOLDS invoke_query but lacks read/change gets the inner gate's 403 for an existing query vs 404 for an unknown one — so existence is visible to grant-holders by design (the intended double-gate). The handler docstring, OpenAPI 404 description, and server.md all claimed the 404 was airtight against any denied actor. Correct the wording in all three (no behavior change) and add the missing symmetric test (invoke_query but no read -> 403 for an existing query, 404 for unknown) so the actual contract is pinned. Also document that in default-deny mode (tokens, no policy) every invocation 404s until an invoke_query rule is configured. Nits: the from_specs collision comment said "first declared wins" but it is lexicographically-first by name (BTreeMap); the effective_tool_name docstring overclaimed the CLI display routes through it (it resolves the rule on its own output DTO). * Default mcp.expose to true (the manifest entry is the opt-in) expose controls MCP-catalog membership only — it is not an authorization gate (invocation is gated by invoke_query regardless). So requiring a per-query mcp.expose: true was friction with no safety benefit: a non-exposed query is still HTTP-invocable by name. Flip the default so declaring a query in the manifest exposes it to the agent tool catalog by default; expose: false is the escape hatch for service-only queries. Both the absent-mcp path (Default impl) and the present-but-no-expose path (serde default fn) now yield true. Doc comments + cli-reference updated; the config round-trip test asserts the new default. * Add GET /queries stored-query catalog endpoint List a graph's mcp.expose stored queries as a typed tool catalog so a client (the MCP server) can register them as tools without fetching .gq source. Each entry carries name, MCP tool_name, description/instruction, a read/mutate flag, and decomposed typed params (kind enum: string|bool|int| bigint|float|date|datetime|blob|vector|list, plus item_kind for lists and vector_dim) — so the consumer builds an input schema with a closed match and never re-parses omnigraph type spelling. I64/U64 are bigint (string on the wire): a JSON number loses precision past 2^53 and the engine already accepts decimal strings. Read-gated (works in default-deny; the catalog is graph-wide, authorized against main). NOT Cedar-filtered per query yet — a reader can list a query whose invoke_query they lack (documented gap until per-query authz lands); invocation stays invoke_query-gated + deny==404. - api: QueriesCatalogOutput / QueryCatalogEntry / ParamDescriptor / ParamKind + query_catalog_entry (reuses PropType::from_param_type_name; scalar_kind is exhaustive, so a new ScalarType is a compile error here until catalogued). - GET /queries route in per_graph_protected (→ /graphs/{id}/queries in multi mode); OpenAPI regenerated; path allowlists updated. - Tests: projection unit (every kind, list, vector, nullable, mutation, empty) + handler (exposed-only filter, read-gate probe-oracle, empty registry). * docs: GET /queries stored-query catalog endpoint Document the catalog: the endpoint table row (GET /queries, read-gated), a catalog section (typed-param kind enum, bigint/date/datetime/blob-as-string, graph-wide/branch-independent, mcp.expose default true, the read-gated probe-oracle gap), and flip the startup note now that the catalog ships. * Collect file-I/O and parse errors in QueryRegistry::load in one pass load() early-returned on any unreadable .gq file, masking parse / identity / tool-name-collision errors in the OTHER (readable) files — so an operator fixed the missing file, restarted, and only then saw the next broken query. Now it collects I/O errors but still runs from_specs on the readable specs and returns the union, so every broken entry surfaces at once (matching the collected-errors contract the rest of the registry already follows). Safe: from_specs' tool-name collision check runs over loaded queries only, so dropping an I/O-failed entry can only under-report a collision, never invent one. I/O errors are ordered first (BTreeMap key order), then spec errors. Adds a load-level test (tempdir: a valid, a missing, and a parse-broken .gq) asserting all three surface in one Err — confirmed red before the fix. * Make invoke_query graph-scoped (one branch authority) invoke_query gates reaching the curated stored-query surface — a graph-level capability. Per-branch/snapshot access is already enforced by the inner read/change gate in run_query/run_mutate (authorized against the resolved branch), so branch-scoping the outer gate was redundant AND wrong for snapshot reads (it defaulted to main). Drop the branch dimension: remove InvokeQuery from uses_branch_scope (it joins admin as graph-scoped) and authorize the boundary gate with branch: None. Lossless: an actor confined to branch X by their read/change rules can still only invoke a stored query that touches X. A rule that sets branch_scope on invoke_query is now rejected by validate() — write invoke_query in its own rule. Ripple (atomic): restructure the server invoke fixture so invoke_query sits in its own branch_scope-free rule; invert invoke_query_is_branch_scoped -> invoke_query_rejects_branch_scope; the per-graph authorize test uses branch: None; docs (policy.md, server.md, the InvokeQuery doc). No wire/OpenAPI change. * Resolve graph config by identity, not server mode Which policy/queries block applies for a graph was decided three different, mode-dependent ways: single-mode boot used top-level even for a named graph; multi-mode used per-graph (and silently ignored a top-level queries block); the CLI used per-graph for a named target. So `queries validate --target prod` could check a different registry than the single-mode server loaded, and a named graph's per-graph policy/queries were silently shadowed. Make config a function of graph IDENTITY: a graph served by NAME (--target/server.graph, a graphs: entry) uses its own graphs.<name>.{policy, queries}; a bare URI is anonymous and uses top-level. One rule, applied by single-mode boot, multi-mode boot, and the CLI — so they can't diverge and the CLI predicts the server exactly. No silent ignore: serving a named graph while a top-level policy/queries block is populated now refuses boot, naming the block (the multi-mode top-level-policy bail, extended to queries and to single-mode-named). The CLI's `queries validate` derives the schema URI and the registry from ONE selection, and a positional URI forces anonymous (ignoring cli.graph) so the two can't come from different graphs. BREAKING (released behavior): single mode by name (--target/server.graph) with top-level policy/queries previously used top-level; it now uses the per-graph block and refuses boot if top-level is also populated. Bare-URI single mode is unchanged. Loud, with migration text pointing at graphs.<name>. - config: resolve_policy_file_for (policy sibling of query_entries_for, no top-level fallback) + populated_top_level_blocks for the coherence check. - characterization tests (single-mode named -> per-graph; named + top-level -> bail; multi-mode top-level queries -> bail; CLI positional-URI -> top-level). - docs: policy.md, server.md, cli-reference.md. * docs: RFC-002 credentials keyed by server name (keychain/profile/env) Reworks the RFC's credentials model: secrets are keyed by server name — OS keychain `omnigraph:<server>` (preferred) -> a `[<server>]` profile in `~/.omnigraph/credentials` -> `OMNIGRAPH_TOKEN[_<SERVER>]` env (CI), the AWS/gh/kube model. `servers.<name>` is endpoint-only by default but may carry an explicit, secret-free `auth: { token: { env|file|command|keychain } }` source. The shipped `bearer_token_env` + `.env.omni` dotenv remain a legacy compat path; no `credentials.yaml`. * docs: RFC-002 — typed graph locator (storage/server/graph_id), not a uri string Add §1.1: the resolved graph address is a typed GraphLocator (Embedded{storage} | Remote{server, graph_id}), not a flat uri: String. Diagnoses the string model's cost in the code today (~16 is_remote_uri forks, TargetConfig can't express multi-server x multi-graph, the CLI bails on remote, the ts SDK models baseUrl+graphId separately) and settles the YAML naming so the key names the locus: - storage: (embedded) — shipped uri: is a deprecated alias - server: + graph_id: (remote) — graph_id defaults to the entry key - storage xor server, reject both/neither (no silent ambiguity) Kills the graphs:/graph: collision and the uri:-might-be-a-server ambiguity. Updates the §1/§8 examples and the entry-shape notes to the new naming. * Test: queries list must reject an unknown --target queries list opens no graph URI, so unknown-graph validation does not ride along on resolve_target_uri the way it does for every other command. The new test reproduces the gap: with an unknown --target the command currently exits 0 and prints the (empty) top-level registry instead of erroring like the URI-resolving commands do. Fails against current code; the fix follows. * Validate the graph selection in queries list Graph-existence validation was a side effect of URI resolution: every URI-resolving command rejects an unknown --target via resolve_target_uri, but queries list opens no URI, so query_entries_for(Some(unknown)) silently fell back to the top-level registry and showed the wrong (or empty) catalog. Make membership a property of the selection: add the fallible resolve_graph_selection alongside the infallible query_entries_for (a known name passes through, an unknown name errors with the same message as resolve_target_uri, None stays anonymous), and validate the selection in execute_queries_list. query_entries_for is unchanged — server boot's bare-URI path still needs its None -> top-level arm. * Surface policy-engine errors from stored-query invoke The invoke handler mapped every authorize_request failure to 404 ('stored query not found'), which collapsed the authorization decision (deny -> 403) together with operational failures (no actor -> 401, Cedar evaluation error -> 500). A real policy-engine 500 was hidden as a missing query. Separate the two concerns instead of sniffing the masked status. Extract authorize() returning an Authz { Allowed, Denied(msg) } decision and reserve Err for operational failures only; authorize_request becomes a thin wrapper that maps Denied -> 403, so the 16 deny-as-403 callers are unchanged. The invoke handler now matches the decision directly: a denial stays 404 (deny == missing, so the catalog can't be probed without the grant), while a 401/500 propagates with its true status. 500 is now a reachable outcome on POST /queries/{name}; document it in the endpoint responses and regenerate openapi.json. * Extract the named-graph/top-level coherence rule into one helper The rule 'a named graph uses its own graphs.<name> block, so a populated top-level block is a config error' lived inline in single-mode server boot. Extract it to OmnigraphConfig::ensure_top_level_blocks_honored so the same definition can be shared by the CLI selection gate (next commit) and the two can't drift. Boot calls the helper; the message is reworded context-neutral (drops 'serving') so it reads correctly from both boot and the CLI. Behavior-preserving: multi-graph mode keeps its own unconditional check, and single_mode_named_graph_rejects_top_level_blocks still passes. * Test: queries validate/list must reject a named graph with a top-level block Server boot refuses a config where a graph is selected by name yet a top-level queries:/policy.file block is populated (the block would be silently ignored). The CLI's queries validate/list resolve the same named selection but skip that coherence check, so they give a false green / list the per-graph block. The new test reproduces it: validate prints OK and list succeeds where boot would refuse. Fails against current code; the fix follows. * Enforce top-level coherence in the single CLI selection gate queries validate validated graph membership only as a side effect of URI resolution and queries list only via resolve_graph_selection's membership check; neither applied the named-graph/top-level coherence rule server boot enforces, so both gave a false green on a config boot refuses. Fold ensure_top_level_blocks_honored into resolve_graph_selection so it is the single gate that returns only valid + server-coherent selections, and route resolve_selected_graph (queries validate) through it; queries list already calls the gate. A named graph with a populated top-level block now errors in both commands, matching boot. A positional URI stays anonymous (top-level honored), so queries_validate_positional_uri_ignores_default_graph is unaffected. * docs: RFC-003 — MCP server surface for omnigraph-server Detailed MCP-transport design for the stored-query/MCP work, building on the shipped #128 registry. Corrects the draft against the branch head: the coarse invoke_query gate + 404 denial-masking are already wired (server_invoke_query), so per-query invoke_query scope (PolicyRequest has no query-name dimension yet) is the real prerequisite; positions the doc as superseding rfc-001's MCP transport (/mcp/tools+/mcp/invoke) and reconciles the shipped mcp.expose YAML form and the schema-introspection non-goal; grounds the parity surface in the actual omnigraph-ts package (13 tools with read/change ids, 2 resources). * docs(config): clarify graph config boundaries * fix(config): enforce graph-scoped policies and query validation * fix(cli): require graph selection for scoped query registries * fix(server): preserve named graph id in single mode policy * fix(cli): share graph identity for policy resolution * test(cli): cover policy tooling server graph selection * fix(cli): honor server graph for policy tooling --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-01 22:50:31 +02:00
```rust
// Reuses — crates/omnigraph-api-types/src/lib.rs:355 (re-exported via omnigraph-server/src/api.rs)
pub enum ParamKind { String, Bool, Int, BigInt, Float, Date, DateTime, Blob, Vector, List }
// Reuses — crates/omnigraph-api-types/src/lib.rs:373
pub struct ParamDescriptor {
pub name: String,
pub kind: ParamKind,
pub item_kind: Option<ParamKind>, // Some(scalar) when kind == List
pub vector_dim: Option<u32>, // Some(dim) when kind == Vector — the dimension lives here, not in the kind
pub nullable: bool,
}
Stored-query registry foundation + config/CLI RFC-002 (#128) * MR-969: add stored-query registry config surface Introduce the `queries:` block in omnigraph.yaml — an inline `name -> entry` map of stored queries, per-graph (`graphs.<id>.queries`) and top-level for single-graph mode, mirroring how `policy` is wired in both modes. Each entry points at a `.gq` file and carries optional MCP exposure settings (`expose`, `tool_name`), defaulting to not-exposed. Additive: absent `queries:` leaves current behavior unchanged. - QueryEntry { file, mcp: McpSettings { expose, tool_name } } - `queries` field on TargetConfig + OmnigraphConfig (serde default) - query_entries() / target_query_entries() accessors - resolve_query_file() — base_dir-relative `.gq` path resolution - round-trip + absent-block tests Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add stored-query registry loader and GraphHandle wiring Add a `queries` module: QueryRegistry loads each declared `.gq` entry, parses it, and selects the query whose symbol matches the manifest key, asserting the two agree (key == `query <name>` symbol). Identity is the query name; a key/symbol mismatch is a load-time error. Errors are collected, not fail-fast, so a bad registry surfaces every broken entry at once. Schema type-checking is deliberately left to a separate pass so the loader stays callable without an open engine. Thread an `Option<Arc<QueryRegistry>>` through GraphHandle alongside the per-graph policy; the URI-canonicalizing clone propagates it. Production openers default to None for now — the boot path loads and attaches the registry in a later change. - QueryRegistry::{from_specs, load, lookup, iter}; StoredQuery::is_mutation - GraphHandle.queries field, propagated on canonical clone - registry unit tests: identity match/mismatch, multi-query selection, per-entry parse errors, error collection, mutation classification Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: add RFC-002 config & CLI architecture Layered config (user-global ~/.config/omnigraph/ + per-project), a unifying `target` abstraction resolving to (locus, graph, sub-state, credential) with embedded-URI XOR remote-server loci, multi-server × multi-graph client targeting, credentials by-reference, and the file-naming decision: project and server config are one artifact (`omnigraph.yaml`); the only differently-named file is the user-global `config.yaml`, split by scope not role. Includes the 12-factor bind portability rule (prefer --bind/OMNIGRAPH_BIND over a committed server.bind) and the defined-locally / invoked-remotely model for stored queries. Derived from first principles working backwards from what the engine enables; validated against kube/Helix/git/compose. Linked from docs/dev/index.md. Proposed; phased rollout for the MR-973/974/981 family. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add check() to validate stored queries against the live schema A pure check(registry, catalog) that type-checks every stored query via the same typecheck_query_decl the engine runs for inline queries — no parallel implementation. Failures are collected, not fail-fast, so an operator sees every broken query (e.g. a type/property a migration renamed or removed) in one pass. Breakages are fatal (the boot path will refuse to start); warnings are advisory. Pure over (registry, catalog) so it is callable both at boot (engine catalog) and offline from the CLI without an open engine. Advisory lint: an mcp.expose:true query that declares a Vector(N) parameter warns — an LLM cannot supply a raw embedding vector; such a query should take a String parameter and embed server-side. Warns rather than rejects, since service-to-service callers may pass vectors. - CheckReport { breakages, warnings }; has_breakages / is_clean - tests: valid query, unknown type, unknown property, collect-not-fail-fast, vector-param-exposed warns, unexposed silent Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Drop internal plan-label refs from stored-query config comments Doc comments referenced sequencing labels ("C2") that mean nothing to a reader; reword to describe the behavior directly. Comment-only. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile aliases with the role model in RFC-002 Place the existing client-only `aliases:` block in the client/server role split: aliases are client-role (CLI, embedded, ungated) and may live in both user-global and project config; `queries:` is server-role (deployment manifest only). They overlap as "name -> .gq"; `queries:` is the superset, and the end-state subsumes aliases (definition -> queries, target/branch/format -> client invocation context, positional args -> CLI sugar). v1 keeps aliases unchanged. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: make RFC-002 config global-first, project-optional The global user config is the primary, self-sufficient default; the CLI works from any directory with no project file (the kubectl/aws/gh posture), a deliberate flip from today's project-anchored behavior. The project omnigraph.yaml becomes an optional repo-scoped override and the deployment manifest. Uniform schema, both layers optional; global can hold any section including a personal server's graphs/queries. Additive: project still overrides global; the flip adds a fallback layer below the project file rather than removing it. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: justify XDG ~/.config/omnigraph over legacy ~/.omnigraph in RFC-002 Make the rationale explicit: XDG-first because OmniGraph is a client that will cache remote catalogs and keep session state alongside secrets, and XDG separates config / cache / state into distinct dirs (clear cache without touching creds; backups skip cache) whereas a single ~/.omnigraph/ mixes them. Honor ~/.omnigraph/ as a fallback for the peer-group (aws/kube/docker/helix) expectation. Add XDG_CACHE_HOME / XDG_STATE_HOME to the override precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: build RFC-002 credentials on the existing env-file mechanism OmniGraph already has credentials-by-reference: bearer_token_env names the env var, and auth.env_file is a git-ignored dotenv the CLI auto-loads (real env vars win), resolved via resolve_remote_bearer_token. The RFC's proposed credentials.yaml + token_env were redundant parallel inventions. Reconcile: reuse bearer_token_env (extend to servers.<name>) and auth.env_file (add a global ~/.config/omnigraph/.env layered under the project .env.omni); OS keychain is an additive future resolver. No new credentials.yaml. Updated summary, non-goals, background, file-naming, credentials, example, login, migration, rollout. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: use single ~/.omnigraph dir (Helix-style), not XDG, in RFC-002 Reverse the earlier XDG-first call. The prior argument rested on a false dichotomy (single-dir => mixed config/cache/state); in fact the peer tools (aws, kube, helix) achieve separation via SUBDIRECTORIES inside one ~/.tool/ dir (~/.aws/sso/cache/, ~/.kube/cache/), getting cache hygiene AND one discoverable place. So everything goes under ~/.omnigraph/: config.yaml, credentials (dotenv, 0600), cache/, state/. Lower cognitive load, matches what DB/cloud-CLI users expect, matches Helix. OMNIGRAPH_HOME overrides; $XDG_CONFIG_HOME optionally honored but ~/.omnigraph/ is canonical. Updated all paths, the rationale paragraph, the file-naming table (added a cache/state row), and env precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile RFC-002 with shipped/planned CLI tickets Align with reality found in existing tickets: - Noun is graph/graphs, not target/targets (MR-603 done renamed the config key targets->graphs, flag --graph). Use graphs:/--graph; an entry is embedded (uri) XOR remote (server + remote graph name). - ~/.omnigraph/ confirmed by MR-581 (og template pull, done) which already quick-starts templates there. - Templates already exist (MR-581/MR-531) — not invented here. - The init family is already specced (init, quickstart MR-973, serve MR-970, prune MR-972, mcp install MR-974, agent-mode MR-981); this RFC only adds the user route (~/.omnigraph/config.yaml + login). - aliases: -> operations: planned (MR-839). - bearer_token_env gap tracked in MR-971. - query lint/check already exist (MR-639) — registry validator must not collide with the singular `query check`. Add a Reconciliation section; fix the canonical example to graphs:/--graph. Also: merge semantics refined (deep-merge settings, replace named entries, replace lists, config view --resolved --show-origin). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: correct stale-ticket claims and fold init/bootstrap design into RFC-002 Verify against code, not ticket statuses (MR-581 is marked done but is stale/unbuilt): no ~/.omnigraph usage, no template/serve/quickstart/ prune/login commands exist; config still uses aliases: (no operations:). So ~/.omnigraph/ stands on peer-convention merits alone, and templates are a design question, not a foothold. Add §7.5: the three-tier init model (user route = login + ~/.omnigraph/config.yaml; thin project init; fat quickstart + templates) with first-principles positions (split init/login, in-place refuse-if-exists, interactive vs --auto/agent-mode, --template flag, secrets-on-scaffold gitignore rule). This RFC owns only the user route; the rest are sibling tickets (MR-973/970/972/974/981). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: breadboard + slice Shape A in RFC-002 Add the implementation breadboard (places P1-P5, affordances N1-N14 with NEW markers, mermaid) and five vertical slices for the selected config/ CLI/init shape: V1 global layer + merge engine + config view; V2 remote graphs + HTTP-client path + credential resolution; V3 omnigraph login; V4 init-hardening + quickstart + templates (rides MR-970); V5 agent-mode (MR-981). Rollout reordered to the slice sequence; spikes X1-X4 gate their owning slice. V1-V2 close the substantive client->server gap. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add InvokeQuery Cedar action (coarse, graph-scoped) A per-graph, branch-scoped action that gates invoking a server-side stored query by name. Coarse for now: an `invoke_query` allow rule permits any stored query on the graph; a future, additive refinement adds an optional per-query-name scope without changing rules written against the coarse action. Enforcement is at the HTTP boundary; the engine `_as` writers still enforce read/change per the query body, so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). No call site yet — the invocation handler wires it in a later change (same pattern as Admin/GraphList added ahead of consumers). - variant + as_str/resource_kind(Graph)/FromStr/uses_branch_scope - Cedar schema: invoke_query appliesTo Graph - tests: per-graph allow/deny, branch-scope accepted Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Load and type-check stored queries at server boot, refusing breakage At startup the server now loads each graph's stored-query registry, type-checks every query against that graph's live schema, and refuses to boot if any query references a type/property the schema doesn't have (same posture as bad policy YAML) — so schema drift surfaces at the deploy boundary, not silently at invocation. Non-blocking warnings are logged. The validated registry is attached to the GraphHandle (the two production sites previously held `queries: None`). Loading (parse + key==symbol identity) happens at settings-build time where the config is in scope; the schema type-check happens after each engine opens (single mode in `open_single_with_queries`, multi mode in `open_single_graph`). `open_with_bearer_tokens_and_policy` delegates with an empty registry so its 18 test callers are unchanged; the public `new_*` constructors are unchanged (only the private build path threads the registry). - ServerConfigMode::Single / GraphStartupConfig carry the loaded registry - boot tests: valid registry boots; type-broken query refuses boot + names it Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add `omnigraph queries validate` and `queries list` CLI `queries validate` type-checks the stored-query registry against the live schema offline — it opens the selected graph, runs the same check() the server runs at boot, prints breakages/warnings (human or --json), and exits non-zero on any breakage — so an operator can catch a query broken by a schema change without restarting the server. `queries list` prints each registered query's name, MCP exposure, and typed params. Named `validate` (not `check`) to avoid overlap with the existing `omnigraph lint` — `query check`/`query lint` are already deprecated argv-shims to `lint`. Registry entries resolve like the server: a named graph uses its per-graph `queries:`; otherwise the top-level one. - Queries subcommand group; reuses QueryRegistry::load + check from omnigraph-server; local-only (needs the schema), mirrors lint - tests: clean registry exits 0, broken query exits non-zero + names it, list shows the query and its typed params Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Route registry selection through one shared query_entries_for The "which queries: block applies for graph X" rule existed twice — the server boot path and the CLI's registry_entries — and had already drifted: the CLI carried an unreachable unwrap_or_else fallback the server lacked. Add OmnigraphConfig::query_entries_for(graph: Option<&str>) as the single definition (named graph -> its per-graph block; otherwise top-level) and route all three sites through it: server single mode, server multi-graph loop, and the CLI. The CLI's dead fallback arm is deleted; CLI and server now resolve identically by construction. No behavior change. Extends the config round-trip test to pin the selector, including the unknown-name -> top-level fallback the deleted CLI arm covered. * Funnel registry validation through one validate_and_attach gate The check -> refuse-on-breakage -> log-warnings -> empty->None block was copy-pasted across both open paths (single mode and the multi-graph per-graph open), differing only by the graph label. A third opener could attach a registry that was never schema-checked. Extract validate_and_attach(queries, catalog, label) -> Option<Arc<..>> as the single gate both paths call, so attaching an unchecked registry is no longer expressible. The catalog handle is an owned Arc, so calling it before the multi-mode policy match (which rebinds db) is borrow-clean. No behavior change. Adds a direct unit test of the helper (empty / clean / breakage incl. the graph label in the message) — covering the multi-graph path's logic, which previously had no boot-refusal coverage. * Resolve param types structurally in the MCP vector lint The exposed-query advisory detected vector params with type_name.starts_with("Vector(") — a second copy of the compiler's own ScalarType::from_str_name vector parsing that could drift from it. Key the lint off PropType::from_param_type_name + ScalarType::Vector(_) instead, the one canonical resolver the type system already uses. Any future param-suppliability lint now reads the structured type rather than scanning the surface string. Behavior-preserving: the grammar forbids list-of-vector params (list_type = "[" base_type "]", and base_type excludes Vector), so the only input where the structured and string checks could differ is unparseable. Adds a guard test that an exposed String param does not false-trigger the warning. * Refuse duplicate MCP tool names across exposed stored queries The effective MCP tool name (explicit tool_name, else the query name) is a second identity namespace beside the registry key, but nothing enforced it unique — two exposed queries could claim one catalog key, and each consumer re-derived the name ad hoc. Add StoredQuery::effective_tool_name() as the one definition, and a load-time uniqueness pass in from_specs over exposed queries: a collision is a collected LoadError naming the loser and the winner. Scoped to exposed queries (unexposed have no MCP tool); deterministic over the BTreeMap so the first-declared wins and the error order is stable. New (rare) refusal: a config with colliding exposed tool names now fails `omnigraph queries validate` offline and refuses server boot, the same posture as a malformed registry. Release-note-worthy. Test-first: duplicate_exposed_tool_name_is_a_load_error (red before the pass, green after) + a CLI offline test; the unexposed sibling pins the exposed-only scope; effective_tool_name asserts folded into the load test. * docs: document the queries registry, CLI, and invoke_query action The stored-query surface shipped without user docs. Add it, per the same-PR maintenance contract: - policy.md: invoke_query as per-graph action #10 (branch-scoped), with the double-gating note; renumber graph_list; add it to the branch_scope list. - cli-reference.md: the `queries validate | list` command, and the `queries:` config block (per-graph + top-level) with mcp.expose/tool_name and the tool-name uniqueness rule. - server.md: boot-time stored-query type-check (refuse on breakage), noting invocation over HTTP/MCP is not yet exposed. * Add POST /queries/{name} stored-query invocation handler Invoke a curated server-side stored query by name: source + name come from the per-graph queries: registry, the client sends only runtime inputs (params, branch, snapshot). Gated by the invoke_query Cedar action at the boundary; the handler delegates to the existing run_query/run_mutate, whose inner Read/Change enforce still runs — so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). - InvokeStoredQueryRequest + an untagged InvokeStoredQueryResponse { Read(ReadOutput), Change(ChangeOutput) } → one Json<_> return type and a oneOf 200 schema (a correct contract, not a wrong-but-simple one). - Route lives in per_graph_protected → single-mode /queries/{name} and multi-mode /graphs/{id}/queries/{name} for free. - Deny == unknown: an invoke_query denial and a missing query both return the same 404, so the catalog can't be probed by an unauthorized caller. - OpenAPI regenerated; tests cover read, mutation double-gate (403 vs 200), bad-param 400, and the identical-404 deny path. Completes the MR-969 V1 invocation slice (registry + /queries/{name} + invoke_query). * docs: stored-query invocation endpoint; flip the not-yet-exposed caveat Now that POST /queries/{name} ships (C7), document it: add the endpoint to server.md's inventory + an invocation section (body, untagged read/mutate envelope, invoke_query gate, double-gated mutations, deny == 404), and flip the startup note that said invocation was not yet exposed. In policy.md, replace "no invocation call site yet" on the invoke_query action with a pointer to the endpoint. * Scope the stored-query 404-hiding claim to non-invoke_query callers Review found the deny==404 catalog-hiding was overstated as a contract: it holds only at the outer invoke_query gate. A caller that HOLDS invoke_query but lacks read/change gets the inner gate's 403 for an existing query vs 404 for an unknown one — so existence is visible to grant-holders by design (the intended double-gate). The handler docstring, OpenAPI 404 description, and server.md all claimed the 404 was airtight against any denied actor. Correct the wording in all three (no behavior change) and add the missing symmetric test (invoke_query but no read -> 403 for an existing query, 404 for unknown) so the actual contract is pinned. Also document that in default-deny mode (tokens, no policy) every invocation 404s until an invoke_query rule is configured. Nits: the from_specs collision comment said "first declared wins" but it is lexicographically-first by name (BTreeMap); the effective_tool_name docstring overclaimed the CLI display routes through it (it resolves the rule on its own output DTO). * Default mcp.expose to true (the manifest entry is the opt-in) expose controls MCP-catalog membership only — it is not an authorization gate (invocation is gated by invoke_query regardless). So requiring a per-query mcp.expose: true was friction with no safety benefit: a non-exposed query is still HTTP-invocable by name. Flip the default so declaring a query in the manifest exposes it to the agent tool catalog by default; expose: false is the escape hatch for service-only queries. Both the absent-mcp path (Default impl) and the present-but-no-expose path (serde default fn) now yield true. Doc comments + cli-reference updated; the config round-trip test asserts the new default. * Add GET /queries stored-query catalog endpoint List a graph's mcp.expose stored queries as a typed tool catalog so a client (the MCP server) can register them as tools without fetching .gq source. Each entry carries name, MCP tool_name, description/instruction, a read/mutate flag, and decomposed typed params (kind enum: string|bool|int| bigint|float|date|datetime|blob|vector|list, plus item_kind for lists and vector_dim) — so the consumer builds an input schema with a closed match and never re-parses omnigraph type spelling. I64/U64 are bigint (string on the wire): a JSON number loses precision past 2^53 and the engine already accepts decimal strings. Read-gated (works in default-deny; the catalog is graph-wide, authorized against main). NOT Cedar-filtered per query yet — a reader can list a query whose invoke_query they lack (documented gap until per-query authz lands); invocation stays invoke_query-gated + deny==404. - api: QueriesCatalogOutput / QueryCatalogEntry / ParamDescriptor / ParamKind + query_catalog_entry (reuses PropType::from_param_type_name; scalar_kind is exhaustive, so a new ScalarType is a compile error here until catalogued). - GET /queries route in per_graph_protected (→ /graphs/{id}/queries in multi mode); OpenAPI regenerated; path allowlists updated. - Tests: projection unit (every kind, list, vector, nullable, mutation, empty) + handler (exposed-only filter, read-gate probe-oracle, empty registry). * docs: GET /queries stored-query catalog endpoint Document the catalog: the endpoint table row (GET /queries, read-gated), a catalog section (typed-param kind enum, bigint/date/datetime/blob-as-string, graph-wide/branch-independent, mcp.expose default true, the read-gated probe-oracle gap), and flip the startup note now that the catalog ships. * Collect file-I/O and parse errors in QueryRegistry::load in one pass load() early-returned on any unreadable .gq file, masking parse / identity / tool-name-collision errors in the OTHER (readable) files — so an operator fixed the missing file, restarted, and only then saw the next broken query. Now it collects I/O errors but still runs from_specs on the readable specs and returns the union, so every broken entry surfaces at once (matching the collected-errors contract the rest of the registry already follows). Safe: from_specs' tool-name collision check runs over loaded queries only, so dropping an I/O-failed entry can only under-report a collision, never invent one. I/O errors are ordered first (BTreeMap key order), then spec errors. Adds a load-level test (tempdir: a valid, a missing, and a parse-broken .gq) asserting all three surface in one Err — confirmed red before the fix. * Make invoke_query graph-scoped (one branch authority) invoke_query gates reaching the curated stored-query surface — a graph-level capability. Per-branch/snapshot access is already enforced by the inner read/change gate in run_query/run_mutate (authorized against the resolved branch), so branch-scoping the outer gate was redundant AND wrong for snapshot reads (it defaulted to main). Drop the branch dimension: remove InvokeQuery from uses_branch_scope (it joins admin as graph-scoped) and authorize the boundary gate with branch: None. Lossless: an actor confined to branch X by their read/change rules can still only invoke a stored query that touches X. A rule that sets branch_scope on invoke_query is now rejected by validate() — write invoke_query in its own rule. Ripple (atomic): restructure the server invoke fixture so invoke_query sits in its own branch_scope-free rule; invert invoke_query_is_branch_scoped -> invoke_query_rejects_branch_scope; the per-graph authorize test uses branch: None; docs (policy.md, server.md, the InvokeQuery doc). No wire/OpenAPI change. * Resolve graph config by identity, not server mode Which policy/queries block applies for a graph was decided three different, mode-dependent ways: single-mode boot used top-level even for a named graph; multi-mode used per-graph (and silently ignored a top-level queries block); the CLI used per-graph for a named target. So `queries validate --target prod` could check a different registry than the single-mode server loaded, and a named graph's per-graph policy/queries were silently shadowed. Make config a function of graph IDENTITY: a graph served by NAME (--target/server.graph, a graphs: entry) uses its own graphs.<name>.{policy, queries}; a bare URI is anonymous and uses top-level. One rule, applied by single-mode boot, multi-mode boot, and the CLI — so they can't diverge and the CLI predicts the server exactly. No silent ignore: serving a named graph while a top-level policy/queries block is populated now refuses boot, naming the block (the multi-mode top-level-policy bail, extended to queries and to single-mode-named). The CLI's `queries validate` derives the schema URI and the registry from ONE selection, and a positional URI forces anonymous (ignoring cli.graph) so the two can't come from different graphs. BREAKING (released behavior): single mode by name (--target/server.graph) with top-level policy/queries previously used top-level; it now uses the per-graph block and refuses boot if top-level is also populated. Bare-URI single mode is unchanged. Loud, with migration text pointing at graphs.<name>. - config: resolve_policy_file_for (policy sibling of query_entries_for, no top-level fallback) + populated_top_level_blocks for the coherence check. - characterization tests (single-mode named -> per-graph; named + top-level -> bail; multi-mode top-level queries -> bail; CLI positional-URI -> top-level). - docs: policy.md, server.md, cli-reference.md. * docs: RFC-002 credentials keyed by server name (keychain/profile/env) Reworks the RFC's credentials model: secrets are keyed by server name — OS keychain `omnigraph:<server>` (preferred) -> a `[<server>]` profile in `~/.omnigraph/credentials` -> `OMNIGRAPH_TOKEN[_<SERVER>]` env (CI), the AWS/gh/kube model. `servers.<name>` is endpoint-only by default but may carry an explicit, secret-free `auth: { token: { env|file|command|keychain } }` source. The shipped `bearer_token_env` + `.env.omni` dotenv remain a legacy compat path; no `credentials.yaml`. * docs: RFC-002 — typed graph locator (storage/server/graph_id), not a uri string Add §1.1: the resolved graph address is a typed GraphLocator (Embedded{storage} | Remote{server, graph_id}), not a flat uri: String. Diagnoses the string model's cost in the code today (~16 is_remote_uri forks, TargetConfig can't express multi-server x multi-graph, the CLI bails on remote, the ts SDK models baseUrl+graphId separately) and settles the YAML naming so the key names the locus: - storage: (embedded) — shipped uri: is a deprecated alias - server: + graph_id: (remote) — graph_id defaults to the entry key - storage xor server, reject both/neither (no silent ambiguity) Kills the graphs:/graph: collision and the uri:-might-be-a-server ambiguity. Updates the §1/§8 examples and the entry-shape notes to the new naming. * Test: queries list must reject an unknown --target queries list opens no graph URI, so unknown-graph validation does not ride along on resolve_target_uri the way it does for every other command. The new test reproduces the gap: with an unknown --target the command currently exits 0 and prints the (empty) top-level registry instead of erroring like the URI-resolving commands do. Fails against current code; the fix follows. * Validate the graph selection in queries list Graph-existence validation was a side effect of URI resolution: every URI-resolving command rejects an unknown --target via resolve_target_uri, but queries list opens no URI, so query_entries_for(Some(unknown)) silently fell back to the top-level registry and showed the wrong (or empty) catalog. Make membership a property of the selection: add the fallible resolve_graph_selection alongside the infallible query_entries_for (a known name passes through, an unknown name errors with the same message as resolve_target_uri, None stays anonymous), and validate the selection in execute_queries_list. query_entries_for is unchanged — server boot's bare-URI path still needs its None -> top-level arm. * Surface policy-engine errors from stored-query invoke The invoke handler mapped every authorize_request failure to 404 ('stored query not found'), which collapsed the authorization decision (deny -> 403) together with operational failures (no actor -> 401, Cedar evaluation error -> 500). A real policy-engine 500 was hidden as a missing query. Separate the two concerns instead of sniffing the masked status. Extract authorize() returning an Authz { Allowed, Denied(msg) } decision and reserve Err for operational failures only; authorize_request becomes a thin wrapper that maps Denied -> 403, so the 16 deny-as-403 callers are unchanged. The invoke handler now matches the decision directly: a denial stays 404 (deny == missing, so the catalog can't be probed without the grant), while a 401/500 propagates with its true status. 500 is now a reachable outcome on POST /queries/{name}; document it in the endpoint responses and regenerate openapi.json. * Extract the named-graph/top-level coherence rule into one helper The rule 'a named graph uses its own graphs.<name> block, so a populated top-level block is a config error' lived inline in single-mode server boot. Extract it to OmnigraphConfig::ensure_top_level_blocks_honored so the same definition can be shared by the CLI selection gate (next commit) and the two can't drift. Boot calls the helper; the message is reworded context-neutral (drops 'serving') so it reads correctly from both boot and the CLI. Behavior-preserving: multi-graph mode keeps its own unconditional check, and single_mode_named_graph_rejects_top_level_blocks still passes. * Test: queries validate/list must reject a named graph with a top-level block Server boot refuses a config where a graph is selected by name yet a top-level queries:/policy.file block is populated (the block would be silently ignored). The CLI's queries validate/list resolve the same named selection but skip that coherence check, so they give a false green / list the per-graph block. The new test reproduces it: validate prints OK and list succeeds where boot would refuse. Fails against current code; the fix follows. * Enforce top-level coherence in the single CLI selection gate queries validate validated graph membership only as a side effect of URI resolution and queries list only via resolve_graph_selection's membership check; neither applied the named-graph/top-level coherence rule server boot enforces, so both gave a false green on a config boot refuses. Fold ensure_top_level_blocks_honored into resolve_graph_selection so it is the single gate that returns only valid + server-coherent selections, and route resolve_selected_graph (queries validate) through it; queries list already calls the gate. A named graph with a populated top-level block now errors in both commands, matching boot. A positional URI stays anonymous (top-level honored), so queries_validate_positional_uri_ignores_default_graph is unaffected. * docs: RFC-003 — MCP server surface for omnigraph-server Detailed MCP-transport design for the stored-query/MCP work, building on the shipped #128 registry. Corrects the draft against the branch head: the coarse invoke_query gate + 404 denial-masking are already wired (server_invoke_query), so per-query invoke_query scope (PolicyRequest has no query-name dimension yet) is the real prerequisite; positions the doc as superseding rfc-001's MCP transport (/mcp/tools+/mcp/invoke) and reconciles the shipped mcp.expose YAML form and the schema-introspection non-goal; grounds the parity surface in the actual omnigraph-ts package (13 tools with read/change ids, 2 resources). * docs(config): clarify graph config boundaries * fix(config): enforce graph-scoped policies and query validation * fix(cli): require graph selection for scoped query registries * fix(server): preserve named graph id in single mode policy * fix(cli): share graph identity for policy resolution * test(cli): cover policy tooling server graph selection * fix(cli): honor server graph for policy tooling --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
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// Reuses — crates/omnigraph-server/src/queries.rs:29
pub struct StoredQuery { pub name: String, pub source: Arc<str>, pub decl: QueryDecl, pub expose: bool, pub tool_name: Option<String> }
impl StoredQuery { pub fn is_mutation(&self) -> bool; pub fn effective_tool_name(&self) -> &str; } // queries.rs:45,55
pub struct QueryRegistry { /* by_name: BTreeMap<String, StoredQuery>; .lookup(&name) */ } // queries.rs:64
```
Stored-query registry foundation + config/CLI RFC-002 (#128) * MR-969: add stored-query registry config surface Introduce the `queries:` block in omnigraph.yaml — an inline `name -> entry` map of stored queries, per-graph (`graphs.<id>.queries`) and top-level for single-graph mode, mirroring how `policy` is wired in both modes. Each entry points at a `.gq` file and carries optional MCP exposure settings (`expose`, `tool_name`), defaulting to not-exposed. Additive: absent `queries:` leaves current behavior unchanged. - QueryEntry { file, mcp: McpSettings { expose, tool_name } } - `queries` field on TargetConfig + OmnigraphConfig (serde default) - query_entries() / target_query_entries() accessors - resolve_query_file() — base_dir-relative `.gq` path resolution - round-trip + absent-block tests Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add stored-query registry loader and GraphHandle wiring Add a `queries` module: QueryRegistry loads each declared `.gq` entry, parses it, and selects the query whose symbol matches the manifest key, asserting the two agree (key == `query <name>` symbol). Identity is the query name; a key/symbol mismatch is a load-time error. Errors are collected, not fail-fast, so a bad registry surfaces every broken entry at once. Schema type-checking is deliberately left to a separate pass so the loader stays callable without an open engine. Thread an `Option<Arc<QueryRegistry>>` through GraphHandle alongside the per-graph policy; the URI-canonicalizing clone propagates it. Production openers default to None for now — the boot path loads and attaches the registry in a later change. - QueryRegistry::{from_specs, load, lookup, iter}; StoredQuery::is_mutation - GraphHandle.queries field, propagated on canonical clone - registry unit tests: identity match/mismatch, multi-query selection, per-entry parse errors, error collection, mutation classification Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: add RFC-002 config & CLI architecture Layered config (user-global ~/.config/omnigraph/ + per-project), a unifying `target` abstraction resolving to (locus, graph, sub-state, credential) with embedded-URI XOR remote-server loci, multi-server × multi-graph client targeting, credentials by-reference, and the file-naming decision: project and server config are one artifact (`omnigraph.yaml`); the only differently-named file is the user-global `config.yaml`, split by scope not role. Includes the 12-factor bind portability rule (prefer --bind/OMNIGRAPH_BIND over a committed server.bind) and the defined-locally / invoked-remotely model for stored queries. Derived from first principles working backwards from what the engine enables; validated against kube/Helix/git/compose. Linked from docs/dev/index.md. Proposed; phased rollout for the MR-973/974/981 family. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add check() to validate stored queries against the live schema A pure check(registry, catalog) that type-checks every stored query via the same typecheck_query_decl the engine runs for inline queries — no parallel implementation. Failures are collected, not fail-fast, so an operator sees every broken query (e.g. a type/property a migration renamed or removed) in one pass. Breakages are fatal (the boot path will refuse to start); warnings are advisory. Pure over (registry, catalog) so it is callable both at boot (engine catalog) and offline from the CLI without an open engine. Advisory lint: an mcp.expose:true query that declares a Vector(N) parameter warns — an LLM cannot supply a raw embedding vector; such a query should take a String parameter and embed server-side. Warns rather than rejects, since service-to-service callers may pass vectors. - CheckReport { breakages, warnings }; has_breakages / is_clean - tests: valid query, unknown type, unknown property, collect-not-fail-fast, vector-param-exposed warns, unexposed silent Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Drop internal plan-label refs from stored-query config comments Doc comments referenced sequencing labels ("C2") that mean nothing to a reader; reword to describe the behavior directly. Comment-only. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile aliases with the role model in RFC-002 Place the existing client-only `aliases:` block in the client/server role split: aliases are client-role (CLI, embedded, ungated) and may live in both user-global and project config; `queries:` is server-role (deployment manifest only). They overlap as "name -> .gq"; `queries:` is the superset, and the end-state subsumes aliases (definition -> queries, target/branch/format -> client invocation context, positional args -> CLI sugar). v1 keeps aliases unchanged. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: make RFC-002 config global-first, project-optional The global user config is the primary, self-sufficient default; the CLI works from any directory with no project file (the kubectl/aws/gh posture), a deliberate flip from today's project-anchored behavior. The project omnigraph.yaml becomes an optional repo-scoped override and the deployment manifest. Uniform schema, both layers optional; global can hold any section including a personal server's graphs/queries. Additive: project still overrides global; the flip adds a fallback layer below the project file rather than removing it. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: justify XDG ~/.config/omnigraph over legacy ~/.omnigraph in RFC-002 Make the rationale explicit: XDG-first because OmniGraph is a client that will cache remote catalogs and keep session state alongside secrets, and XDG separates config / cache / state into distinct dirs (clear cache without touching creds; backups skip cache) whereas a single ~/.omnigraph/ mixes them. Honor ~/.omnigraph/ as a fallback for the peer-group (aws/kube/docker/helix) expectation. Add XDG_CACHE_HOME / XDG_STATE_HOME to the override precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: build RFC-002 credentials on the existing env-file mechanism OmniGraph already has credentials-by-reference: bearer_token_env names the env var, and auth.env_file is a git-ignored dotenv the CLI auto-loads (real env vars win), resolved via resolve_remote_bearer_token. The RFC's proposed credentials.yaml + token_env were redundant parallel inventions. Reconcile: reuse bearer_token_env (extend to servers.<name>) and auth.env_file (add a global ~/.config/omnigraph/.env layered under the project .env.omni); OS keychain is an additive future resolver. No new credentials.yaml. Updated summary, non-goals, background, file-naming, credentials, example, login, migration, rollout. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: use single ~/.omnigraph dir (Helix-style), not XDG, in RFC-002 Reverse the earlier XDG-first call. The prior argument rested on a false dichotomy (single-dir => mixed config/cache/state); in fact the peer tools (aws, kube, helix) achieve separation via SUBDIRECTORIES inside one ~/.tool/ dir (~/.aws/sso/cache/, ~/.kube/cache/), getting cache hygiene AND one discoverable place. So everything goes under ~/.omnigraph/: config.yaml, credentials (dotenv, 0600), cache/, state/. Lower cognitive load, matches what DB/cloud-CLI users expect, matches Helix. OMNIGRAPH_HOME overrides; $XDG_CONFIG_HOME optionally honored but ~/.omnigraph/ is canonical. Updated all paths, the rationale paragraph, the file-naming table (added a cache/state row), and env precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile RFC-002 with shipped/planned CLI tickets Align with reality found in existing tickets: - Noun is graph/graphs, not target/targets (MR-603 done renamed the config key targets->graphs, flag --graph). Use graphs:/--graph; an entry is embedded (uri) XOR remote (server + remote graph name). - ~/.omnigraph/ confirmed by MR-581 (og template pull, done) which already quick-starts templates there. - Templates already exist (MR-581/MR-531) — not invented here. - The init family is already specced (init, quickstart MR-973, serve MR-970, prune MR-972, mcp install MR-974, agent-mode MR-981); this RFC only adds the user route (~/.omnigraph/config.yaml + login). - aliases: -> operations: planned (MR-839). - bearer_token_env gap tracked in MR-971. - query lint/check already exist (MR-639) — registry validator must not collide with the singular `query check`. Add a Reconciliation section; fix the canonical example to graphs:/--graph. Also: merge semantics refined (deep-merge settings, replace named entries, replace lists, config view --resolved --show-origin). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: correct stale-ticket claims and fold init/bootstrap design into RFC-002 Verify against code, not ticket statuses (MR-581 is marked done but is stale/unbuilt): no ~/.omnigraph usage, no template/serve/quickstart/ prune/login commands exist; config still uses aliases: (no operations:). So ~/.omnigraph/ stands on peer-convention merits alone, and templates are a design question, not a foothold. Add §7.5: the three-tier init model (user route = login + ~/.omnigraph/config.yaml; thin project init; fat quickstart + templates) with first-principles positions (split init/login, in-place refuse-if-exists, interactive vs --auto/agent-mode, --template flag, secrets-on-scaffold gitignore rule). This RFC owns only the user route; the rest are sibling tickets (MR-973/970/972/974/981). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: breadboard + slice Shape A in RFC-002 Add the implementation breadboard (places P1-P5, affordances N1-N14 with NEW markers, mermaid) and five vertical slices for the selected config/ CLI/init shape: V1 global layer + merge engine + config view; V2 remote graphs + HTTP-client path + credential resolution; V3 omnigraph login; V4 init-hardening + quickstart + templates (rides MR-970); V5 agent-mode (MR-981). Rollout reordered to the slice sequence; spikes X1-X4 gate their owning slice. V1-V2 close the substantive client->server gap. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add InvokeQuery Cedar action (coarse, graph-scoped) A per-graph, branch-scoped action that gates invoking a server-side stored query by name. Coarse for now: an `invoke_query` allow rule permits any stored query on the graph; a future, additive refinement adds an optional per-query-name scope without changing rules written against the coarse action. Enforcement is at the HTTP boundary; the engine `_as` writers still enforce read/change per the query body, so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). No call site yet — the invocation handler wires it in a later change (same pattern as Admin/GraphList added ahead of consumers). - variant + as_str/resource_kind(Graph)/FromStr/uses_branch_scope - Cedar schema: invoke_query appliesTo Graph - tests: per-graph allow/deny, branch-scope accepted Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Load and type-check stored queries at server boot, refusing breakage At startup the server now loads each graph's stored-query registry, type-checks every query against that graph's live schema, and refuses to boot if any query references a type/property the schema doesn't have (same posture as bad policy YAML) — so schema drift surfaces at the deploy boundary, not silently at invocation. Non-blocking warnings are logged. The validated registry is attached to the GraphHandle (the two production sites previously held `queries: None`). Loading (parse + key==symbol identity) happens at settings-build time where the config is in scope; the schema type-check happens after each engine opens (single mode in `open_single_with_queries`, multi mode in `open_single_graph`). `open_with_bearer_tokens_and_policy` delegates with an empty registry so its 18 test callers are unchanged; the public `new_*` constructors are unchanged (only the private build path threads the registry). - ServerConfigMode::Single / GraphStartupConfig carry the loaded registry - boot tests: valid registry boots; type-broken query refuses boot + names it Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add `omnigraph queries validate` and `queries list` CLI `queries validate` type-checks the stored-query registry against the live schema offline — it opens the selected graph, runs the same check() the server runs at boot, prints breakages/warnings (human or --json), and exits non-zero on any breakage — so an operator can catch a query broken by a schema change without restarting the server. `queries list` prints each registered query's name, MCP exposure, and typed params. Named `validate` (not `check`) to avoid overlap with the existing `omnigraph lint` — `query check`/`query lint` are already deprecated argv-shims to `lint`. Registry entries resolve like the server: a named graph uses its per-graph `queries:`; otherwise the top-level one. - Queries subcommand group; reuses QueryRegistry::load + check from omnigraph-server; local-only (needs the schema), mirrors lint - tests: clean registry exits 0, broken query exits non-zero + names it, list shows the query and its typed params Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Route registry selection through one shared query_entries_for The "which queries: block applies for graph X" rule existed twice — the server boot path and the CLI's registry_entries — and had already drifted: the CLI carried an unreachable unwrap_or_else fallback the server lacked. Add OmnigraphConfig::query_entries_for(graph: Option<&str>) as the single definition (named graph -> its per-graph block; otherwise top-level) and route all three sites through it: server single mode, server multi-graph loop, and the CLI. The CLI's dead fallback arm is deleted; CLI and server now resolve identically by construction. No behavior change. Extends the config round-trip test to pin the selector, including the unknown-name -> top-level fallback the deleted CLI arm covered. * Funnel registry validation through one validate_and_attach gate The check -> refuse-on-breakage -> log-warnings -> empty->None block was copy-pasted across both open paths (single mode and the multi-graph per-graph open), differing only by the graph label. A third opener could attach a registry that was never schema-checked. Extract validate_and_attach(queries, catalog, label) -> Option<Arc<..>> as the single gate both paths call, so attaching an unchecked registry is no longer expressible. The catalog handle is an owned Arc, so calling it before the multi-mode policy match (which rebinds db) is borrow-clean. No behavior change. Adds a direct unit test of the helper (empty / clean / breakage incl. the graph label in the message) — covering the multi-graph path's logic, which previously had no boot-refusal coverage. * Resolve param types structurally in the MCP vector lint The exposed-query advisory detected vector params with type_name.starts_with("Vector(") — a second copy of the compiler's own ScalarType::from_str_name vector parsing that could drift from it. Key the lint off PropType::from_param_type_name + ScalarType::Vector(_) instead, the one canonical resolver the type system already uses. Any future param-suppliability lint now reads the structured type rather than scanning the surface string. Behavior-preserving: the grammar forbids list-of-vector params (list_type = "[" base_type "]", and base_type excludes Vector), so the only input where the structured and string checks could differ is unparseable. Adds a guard test that an exposed String param does not false-trigger the warning. * Refuse duplicate MCP tool names across exposed stored queries The effective MCP tool name (explicit tool_name, else the query name) is a second identity namespace beside the registry key, but nothing enforced it unique — two exposed queries could claim one catalog key, and each consumer re-derived the name ad hoc. Add StoredQuery::effective_tool_name() as the one definition, and a load-time uniqueness pass in from_specs over exposed queries: a collision is a collected LoadError naming the loser and the winner. Scoped to exposed queries (unexposed have no MCP tool); deterministic over the BTreeMap so the first-declared wins and the error order is stable. New (rare) refusal: a config with colliding exposed tool names now fails `omnigraph queries validate` offline and refuses server boot, the same posture as a malformed registry. Release-note-worthy. Test-first: duplicate_exposed_tool_name_is_a_load_error (red before the pass, green after) + a CLI offline test; the unexposed sibling pins the exposed-only scope; effective_tool_name asserts folded into the load test. * docs: document the queries registry, CLI, and invoke_query action The stored-query surface shipped without user docs. Add it, per the same-PR maintenance contract: - policy.md: invoke_query as per-graph action #10 (branch-scoped), with the double-gating note; renumber graph_list; add it to the branch_scope list. - cli-reference.md: the `queries validate | list` command, and the `queries:` config block (per-graph + top-level) with mcp.expose/tool_name and the tool-name uniqueness rule. - server.md: boot-time stored-query type-check (refuse on breakage), noting invocation over HTTP/MCP is not yet exposed. * Add POST /queries/{name} stored-query invocation handler Invoke a curated server-side stored query by name: source + name come from the per-graph queries: registry, the client sends only runtime inputs (params, branch, snapshot). Gated by the invoke_query Cedar action at the boundary; the handler delegates to the existing run_query/run_mutate, whose inner Read/Change enforce still runs — so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). - InvokeStoredQueryRequest + an untagged InvokeStoredQueryResponse { Read(ReadOutput), Change(ChangeOutput) } → one Json<_> return type and a oneOf 200 schema (a correct contract, not a wrong-but-simple one). - Route lives in per_graph_protected → single-mode /queries/{name} and multi-mode /graphs/{id}/queries/{name} for free. - Deny == unknown: an invoke_query denial and a missing query both return the same 404, so the catalog can't be probed by an unauthorized caller. - OpenAPI regenerated; tests cover read, mutation double-gate (403 vs 200), bad-param 400, and the identical-404 deny path. Completes the MR-969 V1 invocation slice (registry + /queries/{name} + invoke_query). * docs: stored-query invocation endpoint; flip the not-yet-exposed caveat Now that POST /queries/{name} ships (C7), document it: add the endpoint to server.md's inventory + an invocation section (body, untagged read/mutate envelope, invoke_query gate, double-gated mutations, deny == 404), and flip the startup note that said invocation was not yet exposed. In policy.md, replace "no invocation call site yet" on the invoke_query action with a pointer to the endpoint. * Scope the stored-query 404-hiding claim to non-invoke_query callers Review found the deny==404 catalog-hiding was overstated as a contract: it holds only at the outer invoke_query gate. A caller that HOLDS invoke_query but lacks read/change gets the inner gate's 403 for an existing query vs 404 for an unknown one — so existence is visible to grant-holders by design (the intended double-gate). The handler docstring, OpenAPI 404 description, and server.md all claimed the 404 was airtight against any denied actor. Correct the wording in all three (no behavior change) and add the missing symmetric test (invoke_query but no read -> 403 for an existing query, 404 for unknown) so the actual contract is pinned. Also document that in default-deny mode (tokens, no policy) every invocation 404s until an invoke_query rule is configured. Nits: the from_specs collision comment said "first declared wins" but it is lexicographically-first by name (BTreeMap); the effective_tool_name docstring overclaimed the CLI display routes through it (it resolves the rule on its own output DTO). * Default mcp.expose to true (the manifest entry is the opt-in) expose controls MCP-catalog membership only — it is not an authorization gate (invocation is gated by invoke_query regardless). So requiring a per-query mcp.expose: true was friction with no safety benefit: a non-exposed query is still HTTP-invocable by name. Flip the default so declaring a query in the manifest exposes it to the agent tool catalog by default; expose: false is the escape hatch for service-only queries. Both the absent-mcp path (Default impl) and the present-but-no-expose path (serde default fn) now yield true. Doc comments + cli-reference updated; the config round-trip test asserts the new default. * Add GET /queries stored-query catalog endpoint List a graph's mcp.expose stored queries as a typed tool catalog so a client (the MCP server) can register them as tools without fetching .gq source. Each entry carries name, MCP tool_name, description/instruction, a read/mutate flag, and decomposed typed params (kind enum: string|bool|int| bigint|float|date|datetime|blob|vector|list, plus item_kind for lists and vector_dim) — so the consumer builds an input schema with a closed match and never re-parses omnigraph type spelling. I64/U64 are bigint (string on the wire): a JSON number loses precision past 2^53 and the engine already accepts decimal strings. Read-gated (works in default-deny; the catalog is graph-wide, authorized against main). NOT Cedar-filtered per query yet — a reader can list a query whose invoke_query they lack (documented gap until per-query authz lands); invocation stays invoke_query-gated + deny==404. - api: QueriesCatalogOutput / QueryCatalogEntry / ParamDescriptor / ParamKind + query_catalog_entry (reuses PropType::from_param_type_name; scalar_kind is exhaustive, so a new ScalarType is a compile error here until catalogued). - GET /queries route in per_graph_protected (→ /graphs/{id}/queries in multi mode); OpenAPI regenerated; path allowlists updated. - Tests: projection unit (every kind, list, vector, nullable, mutation, empty) + handler (exposed-only filter, read-gate probe-oracle, empty registry). * docs: GET /queries stored-query catalog endpoint Document the catalog: the endpoint table row (GET /queries, read-gated), a catalog section (typed-param kind enum, bigint/date/datetime/blob-as-string, graph-wide/branch-independent, mcp.expose default true, the read-gated probe-oracle gap), and flip the startup note now that the catalog ships. * Collect file-I/O and parse errors in QueryRegistry::load in one pass load() early-returned on any unreadable .gq file, masking parse / identity / tool-name-collision errors in the OTHER (readable) files — so an operator fixed the missing file, restarted, and only then saw the next broken query. Now it collects I/O errors but still runs from_specs on the readable specs and returns the union, so every broken entry surfaces at once (matching the collected-errors contract the rest of the registry already follows). Safe: from_specs' tool-name collision check runs over loaded queries only, so dropping an I/O-failed entry can only under-report a collision, never invent one. I/O errors are ordered first (BTreeMap key order), then spec errors. Adds a load-level test (tempdir: a valid, a missing, and a parse-broken .gq) asserting all three surface in one Err — confirmed red before the fix. * Make invoke_query graph-scoped (one branch authority) invoke_query gates reaching the curated stored-query surface — a graph-level capability. Per-branch/snapshot access is already enforced by the inner read/change gate in run_query/run_mutate (authorized against the resolved branch), so branch-scoping the outer gate was redundant AND wrong for snapshot reads (it defaulted to main). Drop the branch dimension: remove InvokeQuery from uses_branch_scope (it joins admin as graph-scoped) and authorize the boundary gate with branch: None. Lossless: an actor confined to branch X by their read/change rules can still only invoke a stored query that touches X. A rule that sets branch_scope on invoke_query is now rejected by validate() — write invoke_query in its own rule. Ripple (atomic): restructure the server invoke fixture so invoke_query sits in its own branch_scope-free rule; invert invoke_query_is_branch_scoped -> invoke_query_rejects_branch_scope; the per-graph authorize test uses branch: None; docs (policy.md, server.md, the InvokeQuery doc). No wire/OpenAPI change. * Resolve graph config by identity, not server mode Which policy/queries block applies for a graph was decided three different, mode-dependent ways: single-mode boot used top-level even for a named graph; multi-mode used per-graph (and silently ignored a top-level queries block); the CLI used per-graph for a named target. So `queries validate --target prod` could check a different registry than the single-mode server loaded, and a named graph's per-graph policy/queries were silently shadowed. Make config a function of graph IDENTITY: a graph served by NAME (--target/server.graph, a graphs: entry) uses its own graphs.<name>.{policy, queries}; a bare URI is anonymous and uses top-level. One rule, applied by single-mode boot, multi-mode boot, and the CLI — so they can't diverge and the CLI predicts the server exactly. No silent ignore: serving a named graph while a top-level policy/queries block is populated now refuses boot, naming the block (the multi-mode top-level-policy bail, extended to queries and to single-mode-named). The CLI's `queries validate` derives the schema URI and the registry from ONE selection, and a positional URI forces anonymous (ignoring cli.graph) so the two can't come from different graphs. BREAKING (released behavior): single mode by name (--target/server.graph) with top-level policy/queries previously used top-level; it now uses the per-graph block and refuses boot if top-level is also populated. Bare-URI single mode is unchanged. Loud, with migration text pointing at graphs.<name>. - config: resolve_policy_file_for (policy sibling of query_entries_for, no top-level fallback) + populated_top_level_blocks for the coherence check. - characterization tests (single-mode named -> per-graph; named + top-level -> bail; multi-mode top-level queries -> bail; CLI positional-URI -> top-level). - docs: policy.md, server.md, cli-reference.md. * docs: RFC-002 credentials keyed by server name (keychain/profile/env) Reworks the RFC's credentials model: secrets are keyed by server name — OS keychain `omnigraph:<server>` (preferred) -> a `[<server>]` profile in `~/.omnigraph/credentials` -> `OMNIGRAPH_TOKEN[_<SERVER>]` env (CI), the AWS/gh/kube model. `servers.<name>` is endpoint-only by default but may carry an explicit, secret-free `auth: { token: { env|file|command|keychain } }` source. The shipped `bearer_token_env` + `.env.omni` dotenv remain a legacy compat path; no `credentials.yaml`. * docs: RFC-002 — typed graph locator (storage/server/graph_id), not a uri string Add §1.1: the resolved graph address is a typed GraphLocator (Embedded{storage} | Remote{server, graph_id}), not a flat uri: String. Diagnoses the string model's cost in the code today (~16 is_remote_uri forks, TargetConfig can't express multi-server x multi-graph, the CLI bails on remote, the ts SDK models baseUrl+graphId separately) and settles the YAML naming so the key names the locus: - storage: (embedded) — shipped uri: is a deprecated alias - server: + graph_id: (remote) — graph_id defaults to the entry key - storage xor server, reject both/neither (no silent ambiguity) Kills the graphs:/graph: collision and the uri:-might-be-a-server ambiguity. Updates the §1/§8 examples and the entry-shape notes to the new naming. * Test: queries list must reject an unknown --target queries list opens no graph URI, so unknown-graph validation does not ride along on resolve_target_uri the way it does for every other command. The new test reproduces the gap: with an unknown --target the command currently exits 0 and prints the (empty) top-level registry instead of erroring like the URI-resolving commands do. Fails against current code; the fix follows. * Validate the graph selection in queries list Graph-existence validation was a side effect of URI resolution: every URI-resolving command rejects an unknown --target via resolve_target_uri, but queries list opens no URI, so query_entries_for(Some(unknown)) silently fell back to the top-level registry and showed the wrong (or empty) catalog. Make membership a property of the selection: add the fallible resolve_graph_selection alongside the infallible query_entries_for (a known name passes through, an unknown name errors with the same message as resolve_target_uri, None stays anonymous), and validate the selection in execute_queries_list. query_entries_for is unchanged — server boot's bare-URI path still needs its None -> top-level arm. * Surface policy-engine errors from stored-query invoke The invoke handler mapped every authorize_request failure to 404 ('stored query not found'), which collapsed the authorization decision (deny -> 403) together with operational failures (no actor -> 401, Cedar evaluation error -> 500). A real policy-engine 500 was hidden as a missing query. Separate the two concerns instead of sniffing the masked status. Extract authorize() returning an Authz { Allowed, Denied(msg) } decision and reserve Err for operational failures only; authorize_request becomes a thin wrapper that maps Denied -> 403, so the 16 deny-as-403 callers are unchanged. The invoke handler now matches the decision directly: a denial stays 404 (deny == missing, so the catalog can't be probed without the grant), while a 401/500 propagates with its true status. 500 is now a reachable outcome on POST /queries/{name}; document it in the endpoint responses and regenerate openapi.json. * Extract the named-graph/top-level coherence rule into one helper The rule 'a named graph uses its own graphs.<name> block, so a populated top-level block is a config error' lived inline in single-mode server boot. Extract it to OmnigraphConfig::ensure_top_level_blocks_honored so the same definition can be shared by the CLI selection gate (next commit) and the two can't drift. Boot calls the helper; the message is reworded context-neutral (drops 'serving') so it reads correctly from both boot and the CLI. Behavior-preserving: multi-graph mode keeps its own unconditional check, and single_mode_named_graph_rejects_top_level_blocks still passes. * Test: queries validate/list must reject a named graph with a top-level block Server boot refuses a config where a graph is selected by name yet a top-level queries:/policy.file block is populated (the block would be silently ignored). The CLI's queries validate/list resolve the same named selection but skip that coherence check, so they give a false green / list the per-graph block. The new test reproduces it: validate prints OK and list succeeds where boot would refuse. Fails against current code; the fix follows. * Enforce top-level coherence in the single CLI selection gate queries validate validated graph membership only as a side effect of URI resolution and queries list only via resolve_graph_selection's membership check; neither applied the named-graph/top-level coherence rule server boot enforces, so both gave a false green on a config boot refuses. Fold ensure_top_level_blocks_honored into resolve_graph_selection so it is the single gate that returns only valid + server-coherent selections, and route resolve_selected_graph (queries validate) through it; queries list already calls the gate. A named graph with a populated top-level block now errors in both commands, matching boot. A positional URI stays anonymous (top-level honored), so queries_validate_positional_uri_ignores_default_graph is unaffected. * docs: RFC-003 — MCP server surface for omnigraph-server Detailed MCP-transport design for the stored-query/MCP work, building on the shipped #128 registry. Corrects the draft against the branch head: the coarse invoke_query gate + 404 denial-masking are already wired (server_invoke_query), so per-query invoke_query scope (PolicyRequest has no query-name dimension yet) is the real prerequisite; positions the doc as superseding rfc-001's MCP transport (/mcp/tools+/mcp/invoke) and reconciles the shipped mcp.expose YAML form and the schema-introspection non-goal; grounds the parity surface in the actual omnigraph-ts package (13 tools with read/change ids, 2 resources). * docs(config): clarify graph config boundaries * fix(config): enforce graph-scoped policies and query validation * fix(cli): require graph selection for scoped query registries * fix(server): preserve named graph id in single mode policy * fix(cli): share graph identity for policy resolution * test(cli): cover policy tooling server graph selection * fix(cli): honor server graph for policy tooling --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-01 22:50:31 +02:00
A query is declared in the cluster's `cluster.yaml graphs.<id>.queries` (a directory
to discover, an explicit file list, or a `name: { file: … }` map); `cluster apply`
publishes it to the content-addressed catalog, and the server loads that graph's
applied registry into `handle.queries` at boot (`settings.rs:71-111`). The
`StoredQuery` struct carries `expose: bool` and `tool_name: Option<String>`, **but
cluster boot currently forces `expose: true, tool_name: None` for every applied
query** (`settings.rs:83-84`, the §D5 bridge — see [§17](#17-decisions--rollout)). So
today the projection lists every applied query and names each by its query name; the
`expose`/`tool_name` plumbing is wired but inert until the cluster catalog grows the
per-query metadata. The projection reads `handle.queries` and is agnostic to the
declaration source. (The legacy single-graph `omnigraph.yaml queries:` map is removed
— RFC-011 made the server cluster-only; there is no other declaration source.)
docs(rfc-003): fold external review into correct-by-design fixes An external review pass raised 8 findings; verified 7 valid (2 confirmed against the engine coercer). Folded them in as class-closing fixes rather than point patches: - §9.1 (③④, the headline): the JSON-Schema generator was a second hand-written copy of the engine's input contract — Blob (base64 vs URI string) and nullable (explicit null) were two drifts of one class. Move the projection to a single param_json_schema in omnigraph-api-types (next to ParamKind/ParamDescriptor), fix Blob -> {"type":"string","format":"uri"} (query_input.rs:449 / api-types:354 say blob-URI string) and nullable -> anyOf[..,null] (query_input.rs:273,296), and lock it to json_value_to_literal_typed with a schema/engine equivalence test so any future drift is a CI failure. - §7/§4 (①): replace the fail-open "empty allowed_origins => skip" with a total OriginPolicy and a single McpHostPolicy::from_bind constructor (remote default DenyBrowsers, enforced by origin_guard independent of rmcp's empty-list quirk). No absent-=>-skip state can be constructed. - §6/§12/§16 (②): make the non-paginated list seam a stated contract (Vec<T>, no nextCursor; meta mode bounds large catalogs) and drop the pagination claims the signature couldn't express. - §9.3 (⑦): built-in/stored tool-name collision becomes a cluster validate/boot error (fold built-in names into the registry uniqueness check), not a silent skip — per the invariants deny-list. - §9.2 (⑥): stored_query_mode folded into the one per-graph mcp: block (Phase 6), not a floating key; not configurable until that surface exists. - §10/§1 (⑧): scope derives from the per-graph mount; server-scoped `health` becomes graph-scoped `graph_health` (server liveness stays REST /healthz). - §13 (⑤, doc-only): OpenAI row corrected to the `authorization` field; Phase-1 reachability via static bearer is unchanged. §17 records the locked decisions; the validation header notes the review pass.
2026-06-16 17:34:00 +02:00
### 9.1 `ParamDescriptor → JSON Schema` (`New`, shared projection + equivalence test)
Stored-query registry foundation + config/CLI RFC-002 (#128) * MR-969: add stored-query registry config surface Introduce the `queries:` block in omnigraph.yaml — an inline `name -> entry` map of stored queries, per-graph (`graphs.<id>.queries`) and top-level for single-graph mode, mirroring how `policy` is wired in both modes. Each entry points at a `.gq` file and carries optional MCP exposure settings (`expose`, `tool_name`), defaulting to not-exposed. Additive: absent `queries:` leaves current behavior unchanged. - QueryEntry { file, mcp: McpSettings { expose, tool_name } } - `queries` field on TargetConfig + OmnigraphConfig (serde default) - query_entries() / target_query_entries() accessors - resolve_query_file() — base_dir-relative `.gq` path resolution - round-trip + absent-block tests Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add stored-query registry loader and GraphHandle wiring Add a `queries` module: QueryRegistry loads each declared `.gq` entry, parses it, and selects the query whose symbol matches the manifest key, asserting the two agree (key == `query <name>` symbol). Identity is the query name; a key/symbol mismatch is a load-time error. Errors are collected, not fail-fast, so a bad registry surfaces every broken entry at once. Schema type-checking is deliberately left to a separate pass so the loader stays callable without an open engine. Thread an `Option<Arc<QueryRegistry>>` through GraphHandle alongside the per-graph policy; the URI-canonicalizing clone propagates it. Production openers default to None for now — the boot path loads and attaches the registry in a later change. - QueryRegistry::{from_specs, load, lookup, iter}; StoredQuery::is_mutation - GraphHandle.queries field, propagated on canonical clone - registry unit tests: identity match/mismatch, multi-query selection, per-entry parse errors, error collection, mutation classification Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: add RFC-002 config & CLI architecture Layered config (user-global ~/.config/omnigraph/ + per-project), a unifying `target` abstraction resolving to (locus, graph, sub-state, credential) with embedded-URI XOR remote-server loci, multi-server × multi-graph client targeting, credentials by-reference, and the file-naming decision: project and server config are one artifact (`omnigraph.yaml`); the only differently-named file is the user-global `config.yaml`, split by scope not role. Includes the 12-factor bind portability rule (prefer --bind/OMNIGRAPH_BIND over a committed server.bind) and the defined-locally / invoked-remotely model for stored queries. Derived from first principles working backwards from what the engine enables; validated against kube/Helix/git/compose. Linked from docs/dev/index.md. Proposed; phased rollout for the MR-973/974/981 family. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add check() to validate stored queries against the live schema A pure check(registry, catalog) that type-checks every stored query via the same typecheck_query_decl the engine runs for inline queries — no parallel implementation. Failures are collected, not fail-fast, so an operator sees every broken query (e.g. a type/property a migration renamed or removed) in one pass. Breakages are fatal (the boot path will refuse to start); warnings are advisory. Pure over (registry, catalog) so it is callable both at boot (engine catalog) and offline from the CLI without an open engine. Advisory lint: an mcp.expose:true query that declares a Vector(N) parameter warns — an LLM cannot supply a raw embedding vector; such a query should take a String parameter and embed server-side. Warns rather than rejects, since service-to-service callers may pass vectors. - CheckReport { breakages, warnings }; has_breakages / is_clean - tests: valid query, unknown type, unknown property, collect-not-fail-fast, vector-param-exposed warns, unexposed silent Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Drop internal plan-label refs from stored-query config comments Doc comments referenced sequencing labels ("C2") that mean nothing to a reader; reword to describe the behavior directly. Comment-only. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile aliases with the role model in RFC-002 Place the existing client-only `aliases:` block in the client/server role split: aliases are client-role (CLI, embedded, ungated) and may live in both user-global and project config; `queries:` is server-role (deployment manifest only). They overlap as "name -> .gq"; `queries:` is the superset, and the end-state subsumes aliases (definition -> queries, target/branch/format -> client invocation context, positional args -> CLI sugar). v1 keeps aliases unchanged. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: make RFC-002 config global-first, project-optional The global user config is the primary, self-sufficient default; the CLI works from any directory with no project file (the kubectl/aws/gh posture), a deliberate flip from today's project-anchored behavior. The project omnigraph.yaml becomes an optional repo-scoped override and the deployment manifest. Uniform schema, both layers optional; global can hold any section including a personal server's graphs/queries. Additive: project still overrides global; the flip adds a fallback layer below the project file rather than removing it. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: justify XDG ~/.config/omnigraph over legacy ~/.omnigraph in RFC-002 Make the rationale explicit: XDG-first because OmniGraph is a client that will cache remote catalogs and keep session state alongside secrets, and XDG separates config / cache / state into distinct dirs (clear cache without touching creds; backups skip cache) whereas a single ~/.omnigraph/ mixes them. Honor ~/.omnigraph/ as a fallback for the peer-group (aws/kube/docker/helix) expectation. Add XDG_CACHE_HOME / XDG_STATE_HOME to the override precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: build RFC-002 credentials on the existing env-file mechanism OmniGraph already has credentials-by-reference: bearer_token_env names the env var, and auth.env_file is a git-ignored dotenv the CLI auto-loads (real env vars win), resolved via resolve_remote_bearer_token. The RFC's proposed credentials.yaml + token_env were redundant parallel inventions. Reconcile: reuse bearer_token_env (extend to servers.<name>) and auth.env_file (add a global ~/.config/omnigraph/.env layered under the project .env.omni); OS keychain is an additive future resolver. No new credentials.yaml. Updated summary, non-goals, background, file-naming, credentials, example, login, migration, rollout. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: use single ~/.omnigraph dir (Helix-style), not XDG, in RFC-002 Reverse the earlier XDG-first call. The prior argument rested on a false dichotomy (single-dir => mixed config/cache/state); in fact the peer tools (aws, kube, helix) achieve separation via SUBDIRECTORIES inside one ~/.tool/ dir (~/.aws/sso/cache/, ~/.kube/cache/), getting cache hygiene AND one discoverable place. So everything goes under ~/.omnigraph/: config.yaml, credentials (dotenv, 0600), cache/, state/. Lower cognitive load, matches what DB/cloud-CLI users expect, matches Helix. OMNIGRAPH_HOME overrides; $XDG_CONFIG_HOME optionally honored but ~/.omnigraph/ is canonical. Updated all paths, the rationale paragraph, the file-naming table (added a cache/state row), and env precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile RFC-002 with shipped/planned CLI tickets Align with reality found in existing tickets: - Noun is graph/graphs, not target/targets (MR-603 done renamed the config key targets->graphs, flag --graph). Use graphs:/--graph; an entry is embedded (uri) XOR remote (server + remote graph name). - ~/.omnigraph/ confirmed by MR-581 (og template pull, done) which already quick-starts templates there. - Templates already exist (MR-581/MR-531) — not invented here. - The init family is already specced (init, quickstart MR-973, serve MR-970, prune MR-972, mcp install MR-974, agent-mode MR-981); this RFC only adds the user route (~/.omnigraph/config.yaml + login). - aliases: -> operations: planned (MR-839). - bearer_token_env gap tracked in MR-971. - query lint/check already exist (MR-639) — registry validator must not collide with the singular `query check`. Add a Reconciliation section; fix the canonical example to graphs:/--graph. Also: merge semantics refined (deep-merge settings, replace named entries, replace lists, config view --resolved --show-origin). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: correct stale-ticket claims and fold init/bootstrap design into RFC-002 Verify against code, not ticket statuses (MR-581 is marked done but is stale/unbuilt): no ~/.omnigraph usage, no template/serve/quickstart/ prune/login commands exist; config still uses aliases: (no operations:). So ~/.omnigraph/ stands on peer-convention merits alone, and templates are a design question, not a foothold. Add §7.5: the three-tier init model (user route = login + ~/.omnigraph/config.yaml; thin project init; fat quickstart + templates) with first-principles positions (split init/login, in-place refuse-if-exists, interactive vs --auto/agent-mode, --template flag, secrets-on-scaffold gitignore rule). This RFC owns only the user route; the rest are sibling tickets (MR-973/970/972/974/981). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: breadboard + slice Shape A in RFC-002 Add the implementation breadboard (places P1-P5, affordances N1-N14 with NEW markers, mermaid) and five vertical slices for the selected config/ CLI/init shape: V1 global layer + merge engine + config view; V2 remote graphs + HTTP-client path + credential resolution; V3 omnigraph login; V4 init-hardening + quickstart + templates (rides MR-970); V5 agent-mode (MR-981). Rollout reordered to the slice sequence; spikes X1-X4 gate their owning slice. V1-V2 close the substantive client->server gap. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add InvokeQuery Cedar action (coarse, graph-scoped) A per-graph, branch-scoped action that gates invoking a server-side stored query by name. Coarse for now: an `invoke_query` allow rule permits any stored query on the graph; a future, additive refinement adds an optional per-query-name scope without changing rules written against the coarse action. Enforcement is at the HTTP boundary; the engine `_as` writers still enforce read/change per the query body, so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). No call site yet — the invocation handler wires it in a later change (same pattern as Admin/GraphList added ahead of consumers). - variant + as_str/resource_kind(Graph)/FromStr/uses_branch_scope - Cedar schema: invoke_query appliesTo Graph - tests: per-graph allow/deny, branch-scope accepted Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Load and type-check stored queries at server boot, refusing breakage At startup the server now loads each graph's stored-query registry, type-checks every query against that graph's live schema, and refuses to boot if any query references a type/property the schema doesn't have (same posture as bad policy YAML) — so schema drift surfaces at the deploy boundary, not silently at invocation. Non-blocking warnings are logged. The validated registry is attached to the GraphHandle (the two production sites previously held `queries: None`). Loading (parse + key==symbol identity) happens at settings-build time where the config is in scope; the schema type-check happens after each engine opens (single mode in `open_single_with_queries`, multi mode in `open_single_graph`). `open_with_bearer_tokens_and_policy` delegates with an empty registry so its 18 test callers are unchanged; the public `new_*` constructors are unchanged (only the private build path threads the registry). - ServerConfigMode::Single / GraphStartupConfig carry the loaded registry - boot tests: valid registry boots; type-broken query refuses boot + names it Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add `omnigraph queries validate` and `queries list` CLI `queries validate` type-checks the stored-query registry against the live schema offline — it opens the selected graph, runs the same check() the server runs at boot, prints breakages/warnings (human or --json), and exits non-zero on any breakage — so an operator can catch a query broken by a schema change without restarting the server. `queries list` prints each registered query's name, MCP exposure, and typed params. Named `validate` (not `check`) to avoid overlap with the existing `omnigraph lint` — `query check`/`query lint` are already deprecated argv-shims to `lint`. Registry entries resolve like the server: a named graph uses its per-graph `queries:`; otherwise the top-level one. - Queries subcommand group; reuses QueryRegistry::load + check from omnigraph-server; local-only (needs the schema), mirrors lint - tests: clean registry exits 0, broken query exits non-zero + names it, list shows the query and its typed params Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Route registry selection through one shared query_entries_for The "which queries: block applies for graph X" rule existed twice — the server boot path and the CLI's registry_entries — and had already drifted: the CLI carried an unreachable unwrap_or_else fallback the server lacked. Add OmnigraphConfig::query_entries_for(graph: Option<&str>) as the single definition (named graph -> its per-graph block; otherwise top-level) and route all three sites through it: server single mode, server multi-graph loop, and the CLI. The CLI's dead fallback arm is deleted; CLI and server now resolve identically by construction. No behavior change. Extends the config round-trip test to pin the selector, including the unknown-name -> top-level fallback the deleted CLI arm covered. * Funnel registry validation through one validate_and_attach gate The check -> refuse-on-breakage -> log-warnings -> empty->None block was copy-pasted across both open paths (single mode and the multi-graph per-graph open), differing only by the graph label. A third opener could attach a registry that was never schema-checked. Extract validate_and_attach(queries, catalog, label) -> Option<Arc<..>> as the single gate both paths call, so attaching an unchecked registry is no longer expressible. The catalog handle is an owned Arc, so calling it before the multi-mode policy match (which rebinds db) is borrow-clean. No behavior change. Adds a direct unit test of the helper (empty / clean / breakage incl. the graph label in the message) — covering the multi-graph path's logic, which previously had no boot-refusal coverage. * Resolve param types structurally in the MCP vector lint The exposed-query advisory detected vector params with type_name.starts_with("Vector(") — a second copy of the compiler's own ScalarType::from_str_name vector parsing that could drift from it. Key the lint off PropType::from_param_type_name + ScalarType::Vector(_) instead, the one canonical resolver the type system already uses. Any future param-suppliability lint now reads the structured type rather than scanning the surface string. Behavior-preserving: the grammar forbids list-of-vector params (list_type = "[" base_type "]", and base_type excludes Vector), so the only input where the structured and string checks could differ is unparseable. Adds a guard test that an exposed String param does not false-trigger the warning. * Refuse duplicate MCP tool names across exposed stored queries The effective MCP tool name (explicit tool_name, else the query name) is a second identity namespace beside the registry key, but nothing enforced it unique — two exposed queries could claim one catalog key, and each consumer re-derived the name ad hoc. Add StoredQuery::effective_tool_name() as the one definition, and a load-time uniqueness pass in from_specs over exposed queries: a collision is a collected LoadError naming the loser and the winner. Scoped to exposed queries (unexposed have no MCP tool); deterministic over the BTreeMap so the first-declared wins and the error order is stable. New (rare) refusal: a config with colliding exposed tool names now fails `omnigraph queries validate` offline and refuses server boot, the same posture as a malformed registry. Release-note-worthy. Test-first: duplicate_exposed_tool_name_is_a_load_error (red before the pass, green after) + a CLI offline test; the unexposed sibling pins the exposed-only scope; effective_tool_name asserts folded into the load test. * docs: document the queries registry, CLI, and invoke_query action The stored-query surface shipped without user docs. Add it, per the same-PR maintenance contract: - policy.md: invoke_query as per-graph action #10 (branch-scoped), with the double-gating note; renumber graph_list; add it to the branch_scope list. - cli-reference.md: the `queries validate | list` command, and the `queries:` config block (per-graph + top-level) with mcp.expose/tool_name and the tool-name uniqueness rule. - server.md: boot-time stored-query type-check (refuse on breakage), noting invocation over HTTP/MCP is not yet exposed. * Add POST /queries/{name} stored-query invocation handler Invoke a curated server-side stored query by name: source + name come from the per-graph queries: registry, the client sends only runtime inputs (params, branch, snapshot). Gated by the invoke_query Cedar action at the boundary; the handler delegates to the existing run_query/run_mutate, whose inner Read/Change enforce still runs — so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). - InvokeStoredQueryRequest + an untagged InvokeStoredQueryResponse { Read(ReadOutput), Change(ChangeOutput) } → one Json<_> return type and a oneOf 200 schema (a correct contract, not a wrong-but-simple one). - Route lives in per_graph_protected → single-mode /queries/{name} and multi-mode /graphs/{id}/queries/{name} for free. - Deny == unknown: an invoke_query denial and a missing query both return the same 404, so the catalog can't be probed by an unauthorized caller. - OpenAPI regenerated; tests cover read, mutation double-gate (403 vs 200), bad-param 400, and the identical-404 deny path. Completes the MR-969 V1 invocation slice (registry + /queries/{name} + invoke_query). * docs: stored-query invocation endpoint; flip the not-yet-exposed caveat Now that POST /queries/{name} ships (C7), document it: add the endpoint to server.md's inventory + an invocation section (body, untagged read/mutate envelope, invoke_query gate, double-gated mutations, deny == 404), and flip the startup note that said invocation was not yet exposed. In policy.md, replace "no invocation call site yet" on the invoke_query action with a pointer to the endpoint. * Scope the stored-query 404-hiding claim to non-invoke_query callers Review found the deny==404 catalog-hiding was overstated as a contract: it holds only at the outer invoke_query gate. A caller that HOLDS invoke_query but lacks read/change gets the inner gate's 403 for an existing query vs 404 for an unknown one — so existence is visible to grant-holders by design (the intended double-gate). The handler docstring, OpenAPI 404 description, and server.md all claimed the 404 was airtight against any denied actor. Correct the wording in all three (no behavior change) and add the missing symmetric test (invoke_query but no read -> 403 for an existing query, 404 for unknown) so the actual contract is pinned. Also document that in default-deny mode (tokens, no policy) every invocation 404s until an invoke_query rule is configured. Nits: the from_specs collision comment said "first declared wins" but it is lexicographically-first by name (BTreeMap); the effective_tool_name docstring overclaimed the CLI display routes through it (it resolves the rule on its own output DTO). * Default mcp.expose to true (the manifest entry is the opt-in) expose controls MCP-catalog membership only — it is not an authorization gate (invocation is gated by invoke_query regardless). So requiring a per-query mcp.expose: true was friction with no safety benefit: a non-exposed query is still HTTP-invocable by name. Flip the default so declaring a query in the manifest exposes it to the agent tool catalog by default; expose: false is the escape hatch for service-only queries. Both the absent-mcp path (Default impl) and the present-but-no-expose path (serde default fn) now yield true. Doc comments + cli-reference updated; the config round-trip test asserts the new default. * Add GET /queries stored-query catalog endpoint List a graph's mcp.expose stored queries as a typed tool catalog so a client (the MCP server) can register them as tools without fetching .gq source. Each entry carries name, MCP tool_name, description/instruction, a read/mutate flag, and decomposed typed params (kind enum: string|bool|int| bigint|float|date|datetime|blob|vector|list, plus item_kind for lists and vector_dim) — so the consumer builds an input schema with a closed match and never re-parses omnigraph type spelling. I64/U64 are bigint (string on the wire): a JSON number loses precision past 2^53 and the engine already accepts decimal strings. Read-gated (works in default-deny; the catalog is graph-wide, authorized against main). NOT Cedar-filtered per query yet — a reader can list a query whose invoke_query they lack (documented gap until per-query authz lands); invocation stays invoke_query-gated + deny==404. - api: QueriesCatalogOutput / QueryCatalogEntry / ParamDescriptor / ParamKind + query_catalog_entry (reuses PropType::from_param_type_name; scalar_kind is exhaustive, so a new ScalarType is a compile error here until catalogued). - GET /queries route in per_graph_protected (→ /graphs/{id}/queries in multi mode); OpenAPI regenerated; path allowlists updated. - Tests: projection unit (every kind, list, vector, nullable, mutation, empty) + handler (exposed-only filter, read-gate probe-oracle, empty registry). * docs: GET /queries stored-query catalog endpoint Document the catalog: the endpoint table row (GET /queries, read-gated), a catalog section (typed-param kind enum, bigint/date/datetime/blob-as-string, graph-wide/branch-independent, mcp.expose default true, the read-gated probe-oracle gap), and flip the startup note now that the catalog ships. * Collect file-I/O and parse errors in QueryRegistry::load in one pass load() early-returned on any unreadable .gq file, masking parse / identity / tool-name-collision errors in the OTHER (readable) files — so an operator fixed the missing file, restarted, and only then saw the next broken query. Now it collects I/O errors but still runs from_specs on the readable specs and returns the union, so every broken entry surfaces at once (matching the collected-errors contract the rest of the registry already follows). Safe: from_specs' tool-name collision check runs over loaded queries only, so dropping an I/O-failed entry can only under-report a collision, never invent one. I/O errors are ordered first (BTreeMap key order), then spec errors. Adds a load-level test (tempdir: a valid, a missing, and a parse-broken .gq) asserting all three surface in one Err — confirmed red before the fix. * Make invoke_query graph-scoped (one branch authority) invoke_query gates reaching the curated stored-query surface — a graph-level capability. Per-branch/snapshot access is already enforced by the inner read/change gate in run_query/run_mutate (authorized against the resolved branch), so branch-scoping the outer gate was redundant AND wrong for snapshot reads (it defaulted to main). Drop the branch dimension: remove InvokeQuery from uses_branch_scope (it joins admin as graph-scoped) and authorize the boundary gate with branch: None. Lossless: an actor confined to branch X by their read/change rules can still only invoke a stored query that touches X. A rule that sets branch_scope on invoke_query is now rejected by validate() — write invoke_query in its own rule. Ripple (atomic): restructure the server invoke fixture so invoke_query sits in its own branch_scope-free rule; invert invoke_query_is_branch_scoped -> invoke_query_rejects_branch_scope; the per-graph authorize test uses branch: None; docs (policy.md, server.md, the InvokeQuery doc). No wire/OpenAPI change. * Resolve graph config by identity, not server mode Which policy/queries block applies for a graph was decided three different, mode-dependent ways: single-mode boot used top-level even for a named graph; multi-mode used per-graph (and silently ignored a top-level queries block); the CLI used per-graph for a named target. So `queries validate --target prod` could check a different registry than the single-mode server loaded, and a named graph's per-graph policy/queries were silently shadowed. Make config a function of graph IDENTITY: a graph served by NAME (--target/server.graph, a graphs: entry) uses its own graphs.<name>.{policy, queries}; a bare URI is anonymous and uses top-level. One rule, applied by single-mode boot, multi-mode boot, and the CLI — so they can't diverge and the CLI predicts the server exactly. No silent ignore: serving a named graph while a top-level policy/queries block is populated now refuses boot, naming the block (the multi-mode top-level-policy bail, extended to queries and to single-mode-named). The CLI's `queries validate` derives the schema URI and the registry from ONE selection, and a positional URI forces anonymous (ignoring cli.graph) so the two can't come from different graphs. BREAKING (released behavior): single mode by name (--target/server.graph) with top-level policy/queries previously used top-level; it now uses the per-graph block and refuses boot if top-level is also populated. Bare-URI single mode is unchanged. Loud, with migration text pointing at graphs.<name>. - config: resolve_policy_file_for (policy sibling of query_entries_for, no top-level fallback) + populated_top_level_blocks for the coherence check. - characterization tests (single-mode named -> per-graph; named + top-level -> bail; multi-mode top-level queries -> bail; CLI positional-URI -> top-level). - docs: policy.md, server.md, cli-reference.md. * docs: RFC-002 credentials keyed by server name (keychain/profile/env) Reworks the RFC's credentials model: secrets are keyed by server name — OS keychain `omnigraph:<server>` (preferred) -> a `[<server>]` profile in `~/.omnigraph/credentials` -> `OMNIGRAPH_TOKEN[_<SERVER>]` env (CI), the AWS/gh/kube model. `servers.<name>` is endpoint-only by default but may carry an explicit, secret-free `auth: { token: { env|file|command|keychain } }` source. The shipped `bearer_token_env` + `.env.omni` dotenv remain a legacy compat path; no `credentials.yaml`. * docs: RFC-002 — typed graph locator (storage/server/graph_id), not a uri string Add §1.1: the resolved graph address is a typed GraphLocator (Embedded{storage} | Remote{server, graph_id}), not a flat uri: String. Diagnoses the string model's cost in the code today (~16 is_remote_uri forks, TargetConfig can't express multi-server x multi-graph, the CLI bails on remote, the ts SDK models baseUrl+graphId separately) and settles the YAML naming so the key names the locus: - storage: (embedded) — shipped uri: is a deprecated alias - server: + graph_id: (remote) — graph_id defaults to the entry key - storage xor server, reject both/neither (no silent ambiguity) Kills the graphs:/graph: collision and the uri:-might-be-a-server ambiguity. Updates the §1/§8 examples and the entry-shape notes to the new naming. * Test: queries list must reject an unknown --target queries list opens no graph URI, so unknown-graph validation does not ride along on resolve_target_uri the way it does for every other command. The new test reproduces the gap: with an unknown --target the command currently exits 0 and prints the (empty) top-level registry instead of erroring like the URI-resolving commands do. Fails against current code; the fix follows. * Validate the graph selection in queries list Graph-existence validation was a side effect of URI resolution: every URI-resolving command rejects an unknown --target via resolve_target_uri, but queries list opens no URI, so query_entries_for(Some(unknown)) silently fell back to the top-level registry and showed the wrong (or empty) catalog. Make membership a property of the selection: add the fallible resolve_graph_selection alongside the infallible query_entries_for (a known name passes through, an unknown name errors with the same message as resolve_target_uri, None stays anonymous), and validate the selection in execute_queries_list. query_entries_for is unchanged — server boot's bare-URI path still needs its None -> top-level arm. * Surface policy-engine errors from stored-query invoke The invoke handler mapped every authorize_request failure to 404 ('stored query not found'), which collapsed the authorization decision (deny -> 403) together with operational failures (no actor -> 401, Cedar evaluation error -> 500). A real policy-engine 500 was hidden as a missing query. Separate the two concerns instead of sniffing the masked status. Extract authorize() returning an Authz { Allowed, Denied(msg) } decision and reserve Err for operational failures only; authorize_request becomes a thin wrapper that maps Denied -> 403, so the 16 deny-as-403 callers are unchanged. The invoke handler now matches the decision directly: a denial stays 404 (deny == missing, so the catalog can't be probed without the grant), while a 401/500 propagates with its true status. 500 is now a reachable outcome on POST /queries/{name}; document it in the endpoint responses and regenerate openapi.json. * Extract the named-graph/top-level coherence rule into one helper The rule 'a named graph uses its own graphs.<name> block, so a populated top-level block is a config error' lived inline in single-mode server boot. Extract it to OmnigraphConfig::ensure_top_level_blocks_honored so the same definition can be shared by the CLI selection gate (next commit) and the two can't drift. Boot calls the helper; the message is reworded context-neutral (drops 'serving') so it reads correctly from both boot and the CLI. Behavior-preserving: multi-graph mode keeps its own unconditional check, and single_mode_named_graph_rejects_top_level_blocks still passes. * Test: queries validate/list must reject a named graph with a top-level block Server boot refuses a config where a graph is selected by name yet a top-level queries:/policy.file block is populated (the block would be silently ignored). The CLI's queries validate/list resolve the same named selection but skip that coherence check, so they give a false green / list the per-graph block. The new test reproduces it: validate prints OK and list succeeds where boot would refuse. Fails against current code; the fix follows. * Enforce top-level coherence in the single CLI selection gate queries validate validated graph membership only as a side effect of URI resolution and queries list only via resolve_graph_selection's membership check; neither applied the named-graph/top-level coherence rule server boot enforces, so both gave a false green on a config boot refuses. Fold ensure_top_level_blocks_honored into resolve_graph_selection so it is the single gate that returns only valid + server-coherent selections, and route resolve_selected_graph (queries validate) through it; queries list already calls the gate. A named graph with a populated top-level block now errors in both commands, matching boot. A positional URI stays anonymous (top-level honored), so queries_validate_positional_uri_ignores_default_graph is unaffected. * docs: RFC-003 — MCP server surface for omnigraph-server Detailed MCP-transport design for the stored-query/MCP work, building on the shipped #128 registry. Corrects the draft against the branch head: the coarse invoke_query gate + 404 denial-masking are already wired (server_invoke_query), so per-query invoke_query scope (PolicyRequest has no query-name dimension yet) is the real prerequisite; positions the doc as superseding rfc-001's MCP transport (/mcp/tools+/mcp/invoke) and reconciles the shipped mcp.expose YAML form and the schema-introspection non-goal; grounds the parity surface in the actual omnigraph-ts package (13 tools with read/change ids, 2 resources). * docs(config): clarify graph config boundaries * fix(config): enforce graph-scoped policies and query validation * fix(cli): require graph selection for scoped query registries * fix(server): preserve named graph id in single mode policy * fix(cli): share graph identity for policy resolution * test(cli): cover policy tooling server graph selection * fix(cli): honor server graph for policy tooling --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-01 22:50:31 +02:00
docs(rfc-003): fold external review into correct-by-design fixes An external review pass raised 8 findings; verified 7 valid (2 confirmed against the engine coercer). Folded them in as class-closing fixes rather than point patches: - §9.1 (③④, the headline): the JSON-Schema generator was a second hand-written copy of the engine's input contract — Blob (base64 vs URI string) and nullable (explicit null) were two drifts of one class. Move the projection to a single param_json_schema in omnigraph-api-types (next to ParamKind/ParamDescriptor), fix Blob -> {"type":"string","format":"uri"} (query_input.rs:449 / api-types:354 say blob-URI string) and nullable -> anyOf[..,null] (query_input.rs:273,296), and lock it to json_value_to_literal_typed with a schema/engine equivalence test so any future drift is a CI failure. - §7/§4 (①): replace the fail-open "empty allowed_origins => skip" with a total OriginPolicy and a single McpHostPolicy::from_bind constructor (remote default DenyBrowsers, enforced by origin_guard independent of rmcp's empty-list quirk). No absent-=>-skip state can be constructed. - §6/§12/§16 (②): make the non-paginated list seam a stated contract (Vec<T>, no nextCursor; meta mode bounds large catalogs) and drop the pagination claims the signature couldn't express. - §9.3 (⑦): built-in/stored tool-name collision becomes a cluster validate/boot error (fold built-in names into the registry uniqueness check), not a silent skip — per the invariants deny-list. - §9.2 (⑥): stored_query_mode folded into the one per-graph mcp: block (Phase 6), not a floating key; not configurable until that surface exists. - §10/§1 (⑧): scope derives from the per-graph mount; server-scoped `health` becomes graph-scoped `graph_health` (server liveness stays REST /healthz). - §13 (⑤, doc-only): OpenAI row corrected to the `authorization` field; Phase-1 reachability via static bearer is unchanged. §17 records the locked decisions; the validation header notes the review pass.
2026-06-16 17:34:00 +02:00
JSON Schema 2020-12. **The schema generator is the engine's input contract, not a
second copy of it.** The authority for what a param accepts is the runtime coercer
`json_value_to_literal_typed` (`crates/omnigraph-compiler/src/query_input.rs`); a
hand-written schema in the MCP crate is a parallel encoding that *will* drift — the
review found two drifts at once (Blob, nullable), and BigInt/Date/Vector are latent
siblings of the same class. So the projection lives **next to the DTO it projects**, in
`omnigraph-api-types` (where `ParamKind`/`ParamDescriptor` already live and are
`ToSchema`), is the single mapping both OpenAPI and MCP consume, and is **locked to the
coercer by an equivalence test** — drift becomes a CI failure, not a shipped bug.
Stored-query registry foundation + config/CLI RFC-002 (#128) * MR-969: add stored-query registry config surface Introduce the `queries:` block in omnigraph.yaml — an inline `name -> entry` map of stored queries, per-graph (`graphs.<id>.queries`) and top-level for single-graph mode, mirroring how `policy` is wired in both modes. Each entry points at a `.gq` file and carries optional MCP exposure settings (`expose`, `tool_name`), defaulting to not-exposed. Additive: absent `queries:` leaves current behavior unchanged. - QueryEntry { file, mcp: McpSettings { expose, tool_name } } - `queries` field on TargetConfig + OmnigraphConfig (serde default) - query_entries() / target_query_entries() accessors - resolve_query_file() — base_dir-relative `.gq` path resolution - round-trip + absent-block tests Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add stored-query registry loader and GraphHandle wiring Add a `queries` module: QueryRegistry loads each declared `.gq` entry, parses it, and selects the query whose symbol matches the manifest key, asserting the two agree (key == `query <name>` symbol). Identity is the query name; a key/symbol mismatch is a load-time error. Errors are collected, not fail-fast, so a bad registry surfaces every broken entry at once. Schema type-checking is deliberately left to a separate pass so the loader stays callable without an open engine. Thread an `Option<Arc<QueryRegistry>>` through GraphHandle alongside the per-graph policy; the URI-canonicalizing clone propagates it. Production openers default to None for now — the boot path loads and attaches the registry in a later change. - QueryRegistry::{from_specs, load, lookup, iter}; StoredQuery::is_mutation - GraphHandle.queries field, propagated on canonical clone - registry unit tests: identity match/mismatch, multi-query selection, per-entry parse errors, error collection, mutation classification Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: add RFC-002 config & CLI architecture Layered config (user-global ~/.config/omnigraph/ + per-project), a unifying `target` abstraction resolving to (locus, graph, sub-state, credential) with embedded-URI XOR remote-server loci, multi-server × multi-graph client targeting, credentials by-reference, and the file-naming decision: project and server config are one artifact (`omnigraph.yaml`); the only differently-named file is the user-global `config.yaml`, split by scope not role. Includes the 12-factor bind portability rule (prefer --bind/OMNIGRAPH_BIND over a committed server.bind) and the defined-locally / invoked-remotely model for stored queries. Derived from first principles working backwards from what the engine enables; validated against kube/Helix/git/compose. Linked from docs/dev/index.md. Proposed; phased rollout for the MR-973/974/981 family. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add check() to validate stored queries against the live schema A pure check(registry, catalog) that type-checks every stored query via the same typecheck_query_decl the engine runs for inline queries — no parallel implementation. Failures are collected, not fail-fast, so an operator sees every broken query (e.g. a type/property a migration renamed or removed) in one pass. Breakages are fatal (the boot path will refuse to start); warnings are advisory. Pure over (registry, catalog) so it is callable both at boot (engine catalog) and offline from the CLI without an open engine. Advisory lint: an mcp.expose:true query that declares a Vector(N) parameter warns — an LLM cannot supply a raw embedding vector; such a query should take a String parameter and embed server-side. Warns rather than rejects, since service-to-service callers may pass vectors. - CheckReport { breakages, warnings }; has_breakages / is_clean - tests: valid query, unknown type, unknown property, collect-not-fail-fast, vector-param-exposed warns, unexposed silent Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Drop internal plan-label refs from stored-query config comments Doc comments referenced sequencing labels ("C2") that mean nothing to a reader; reword to describe the behavior directly. Comment-only. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile aliases with the role model in RFC-002 Place the existing client-only `aliases:` block in the client/server role split: aliases are client-role (CLI, embedded, ungated) and may live in both user-global and project config; `queries:` is server-role (deployment manifest only). They overlap as "name -> .gq"; `queries:` is the superset, and the end-state subsumes aliases (definition -> queries, target/branch/format -> client invocation context, positional args -> CLI sugar). v1 keeps aliases unchanged. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: make RFC-002 config global-first, project-optional The global user config is the primary, self-sufficient default; the CLI works from any directory with no project file (the kubectl/aws/gh posture), a deliberate flip from today's project-anchored behavior. The project omnigraph.yaml becomes an optional repo-scoped override and the deployment manifest. Uniform schema, both layers optional; global can hold any section including a personal server's graphs/queries. Additive: project still overrides global; the flip adds a fallback layer below the project file rather than removing it. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: justify XDG ~/.config/omnigraph over legacy ~/.omnigraph in RFC-002 Make the rationale explicit: XDG-first because OmniGraph is a client that will cache remote catalogs and keep session state alongside secrets, and XDG separates config / cache / state into distinct dirs (clear cache without touching creds; backups skip cache) whereas a single ~/.omnigraph/ mixes them. Honor ~/.omnigraph/ as a fallback for the peer-group (aws/kube/docker/helix) expectation. Add XDG_CACHE_HOME / XDG_STATE_HOME to the override precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: build RFC-002 credentials on the existing env-file mechanism OmniGraph already has credentials-by-reference: bearer_token_env names the env var, and auth.env_file is a git-ignored dotenv the CLI auto-loads (real env vars win), resolved via resolve_remote_bearer_token. The RFC's proposed credentials.yaml + token_env were redundant parallel inventions. Reconcile: reuse bearer_token_env (extend to servers.<name>) and auth.env_file (add a global ~/.config/omnigraph/.env layered under the project .env.omni); OS keychain is an additive future resolver. No new credentials.yaml. Updated summary, non-goals, background, file-naming, credentials, example, login, migration, rollout. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: use single ~/.omnigraph dir (Helix-style), not XDG, in RFC-002 Reverse the earlier XDG-first call. The prior argument rested on a false dichotomy (single-dir => mixed config/cache/state); in fact the peer tools (aws, kube, helix) achieve separation via SUBDIRECTORIES inside one ~/.tool/ dir (~/.aws/sso/cache/, ~/.kube/cache/), getting cache hygiene AND one discoverable place. So everything goes under ~/.omnigraph/: config.yaml, credentials (dotenv, 0600), cache/, state/. Lower cognitive load, matches what DB/cloud-CLI users expect, matches Helix. OMNIGRAPH_HOME overrides; $XDG_CONFIG_HOME optionally honored but ~/.omnigraph/ is canonical. Updated all paths, the rationale paragraph, the file-naming table (added a cache/state row), and env precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile RFC-002 with shipped/planned CLI tickets Align with reality found in existing tickets: - Noun is graph/graphs, not target/targets (MR-603 done renamed the config key targets->graphs, flag --graph). Use graphs:/--graph; an entry is embedded (uri) XOR remote (server + remote graph name). - ~/.omnigraph/ confirmed by MR-581 (og template pull, done) which already quick-starts templates there. - Templates already exist (MR-581/MR-531) — not invented here. - The init family is already specced (init, quickstart MR-973, serve MR-970, prune MR-972, mcp install MR-974, agent-mode MR-981); this RFC only adds the user route (~/.omnigraph/config.yaml + login). - aliases: -> operations: planned (MR-839). - bearer_token_env gap tracked in MR-971. - query lint/check already exist (MR-639) — registry validator must not collide with the singular `query check`. Add a Reconciliation section; fix the canonical example to graphs:/--graph. Also: merge semantics refined (deep-merge settings, replace named entries, replace lists, config view --resolved --show-origin). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: correct stale-ticket claims and fold init/bootstrap design into RFC-002 Verify against code, not ticket statuses (MR-581 is marked done but is stale/unbuilt): no ~/.omnigraph usage, no template/serve/quickstart/ prune/login commands exist; config still uses aliases: (no operations:). So ~/.omnigraph/ stands on peer-convention merits alone, and templates are a design question, not a foothold. Add §7.5: the three-tier init model (user route = login + ~/.omnigraph/config.yaml; thin project init; fat quickstart + templates) with first-principles positions (split init/login, in-place refuse-if-exists, interactive vs --auto/agent-mode, --template flag, secrets-on-scaffold gitignore rule). This RFC owns only the user route; the rest are sibling tickets (MR-973/970/972/974/981). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: breadboard + slice Shape A in RFC-002 Add the implementation breadboard (places P1-P5, affordances N1-N14 with NEW markers, mermaid) and five vertical slices for the selected config/ CLI/init shape: V1 global layer + merge engine + config view; V2 remote graphs + HTTP-client path + credential resolution; V3 omnigraph login; V4 init-hardening + quickstart + templates (rides MR-970); V5 agent-mode (MR-981). Rollout reordered to the slice sequence; spikes X1-X4 gate their owning slice. V1-V2 close the substantive client->server gap. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add InvokeQuery Cedar action (coarse, graph-scoped) A per-graph, branch-scoped action that gates invoking a server-side stored query by name. Coarse for now: an `invoke_query` allow rule permits any stored query on the graph; a future, additive refinement adds an optional per-query-name scope without changing rules written against the coarse action. Enforcement is at the HTTP boundary; the engine `_as` writers still enforce read/change per the query body, so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). No call site yet — the invocation handler wires it in a later change (same pattern as Admin/GraphList added ahead of consumers). - variant + as_str/resource_kind(Graph)/FromStr/uses_branch_scope - Cedar schema: invoke_query appliesTo Graph - tests: per-graph allow/deny, branch-scope accepted Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Load and type-check stored queries at server boot, refusing breakage At startup the server now loads each graph's stored-query registry, type-checks every query against that graph's live schema, and refuses to boot if any query references a type/property the schema doesn't have (same posture as bad policy YAML) — so schema drift surfaces at the deploy boundary, not silently at invocation. Non-blocking warnings are logged. The validated registry is attached to the GraphHandle (the two production sites previously held `queries: None`). Loading (parse + key==symbol identity) happens at settings-build time where the config is in scope; the schema type-check happens after each engine opens (single mode in `open_single_with_queries`, multi mode in `open_single_graph`). `open_with_bearer_tokens_and_policy` delegates with an empty registry so its 18 test callers are unchanged; the public `new_*` constructors are unchanged (only the private build path threads the registry). - ServerConfigMode::Single / GraphStartupConfig carry the loaded registry - boot tests: valid registry boots; type-broken query refuses boot + names it Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add `omnigraph queries validate` and `queries list` CLI `queries validate` type-checks the stored-query registry against the live schema offline — it opens the selected graph, runs the same check() the server runs at boot, prints breakages/warnings (human or --json), and exits non-zero on any breakage — so an operator can catch a query broken by a schema change without restarting the server. `queries list` prints each registered query's name, MCP exposure, and typed params. Named `validate` (not `check`) to avoid overlap with the existing `omnigraph lint` — `query check`/`query lint` are already deprecated argv-shims to `lint`. Registry entries resolve like the server: a named graph uses its per-graph `queries:`; otherwise the top-level one. - Queries subcommand group; reuses QueryRegistry::load + check from omnigraph-server; local-only (needs the schema), mirrors lint - tests: clean registry exits 0, broken query exits non-zero + names it, list shows the query and its typed params Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Route registry selection through one shared query_entries_for The "which queries: block applies for graph X" rule existed twice — the server boot path and the CLI's registry_entries — and had already drifted: the CLI carried an unreachable unwrap_or_else fallback the server lacked. Add OmnigraphConfig::query_entries_for(graph: Option<&str>) as the single definition (named graph -> its per-graph block; otherwise top-level) and route all three sites through it: server single mode, server multi-graph loop, and the CLI. The CLI's dead fallback arm is deleted; CLI and server now resolve identically by construction. No behavior change. Extends the config round-trip test to pin the selector, including the unknown-name -> top-level fallback the deleted CLI arm covered. * Funnel registry validation through one validate_and_attach gate The check -> refuse-on-breakage -> log-warnings -> empty->None block was copy-pasted across both open paths (single mode and the multi-graph per-graph open), differing only by the graph label. A third opener could attach a registry that was never schema-checked. Extract validate_and_attach(queries, catalog, label) -> Option<Arc<..>> as the single gate both paths call, so attaching an unchecked registry is no longer expressible. The catalog handle is an owned Arc, so calling it before the multi-mode policy match (which rebinds db) is borrow-clean. No behavior change. Adds a direct unit test of the helper (empty / clean / breakage incl. the graph label in the message) — covering the multi-graph path's logic, which previously had no boot-refusal coverage. * Resolve param types structurally in the MCP vector lint The exposed-query advisory detected vector params with type_name.starts_with("Vector(") — a second copy of the compiler's own ScalarType::from_str_name vector parsing that could drift from it. Key the lint off PropType::from_param_type_name + ScalarType::Vector(_) instead, the one canonical resolver the type system already uses. Any future param-suppliability lint now reads the structured type rather than scanning the surface string. Behavior-preserving: the grammar forbids list-of-vector params (list_type = "[" base_type "]", and base_type excludes Vector), so the only input where the structured and string checks could differ is unparseable. Adds a guard test that an exposed String param does not false-trigger the warning. * Refuse duplicate MCP tool names across exposed stored queries The effective MCP tool name (explicit tool_name, else the query name) is a second identity namespace beside the registry key, but nothing enforced it unique — two exposed queries could claim one catalog key, and each consumer re-derived the name ad hoc. Add StoredQuery::effective_tool_name() as the one definition, and a load-time uniqueness pass in from_specs over exposed queries: a collision is a collected LoadError naming the loser and the winner. Scoped to exposed queries (unexposed have no MCP tool); deterministic over the BTreeMap so the first-declared wins and the error order is stable. New (rare) refusal: a config with colliding exposed tool names now fails `omnigraph queries validate` offline and refuses server boot, the same posture as a malformed registry. Release-note-worthy. Test-first: duplicate_exposed_tool_name_is_a_load_error (red before the pass, green after) + a CLI offline test; the unexposed sibling pins the exposed-only scope; effective_tool_name asserts folded into the load test. * docs: document the queries registry, CLI, and invoke_query action The stored-query surface shipped without user docs. Add it, per the same-PR maintenance contract: - policy.md: invoke_query as per-graph action #10 (branch-scoped), with the double-gating note; renumber graph_list; add it to the branch_scope list. - cli-reference.md: the `queries validate | list` command, and the `queries:` config block (per-graph + top-level) with mcp.expose/tool_name and the tool-name uniqueness rule. - server.md: boot-time stored-query type-check (refuse on breakage), noting invocation over HTTP/MCP is not yet exposed. * Add POST /queries/{name} stored-query invocation handler Invoke a curated server-side stored query by name: source + name come from the per-graph queries: registry, the client sends only runtime inputs (params, branch, snapshot). Gated by the invoke_query Cedar action at the boundary; the handler delegates to the existing run_query/run_mutate, whose inner Read/Change enforce still runs — so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). - InvokeStoredQueryRequest + an untagged InvokeStoredQueryResponse { Read(ReadOutput), Change(ChangeOutput) } → one Json<_> return type and a oneOf 200 schema (a correct contract, not a wrong-but-simple one). - Route lives in per_graph_protected → single-mode /queries/{name} and multi-mode /graphs/{id}/queries/{name} for free. - Deny == unknown: an invoke_query denial and a missing query both return the same 404, so the catalog can't be probed by an unauthorized caller. - OpenAPI regenerated; tests cover read, mutation double-gate (403 vs 200), bad-param 400, and the identical-404 deny path. Completes the MR-969 V1 invocation slice (registry + /queries/{name} + invoke_query). * docs: stored-query invocation endpoint; flip the not-yet-exposed caveat Now that POST /queries/{name} ships (C7), document it: add the endpoint to server.md's inventory + an invocation section (body, untagged read/mutate envelope, invoke_query gate, double-gated mutations, deny == 404), and flip the startup note that said invocation was not yet exposed. In policy.md, replace "no invocation call site yet" on the invoke_query action with a pointer to the endpoint. * Scope the stored-query 404-hiding claim to non-invoke_query callers Review found the deny==404 catalog-hiding was overstated as a contract: it holds only at the outer invoke_query gate. A caller that HOLDS invoke_query but lacks read/change gets the inner gate's 403 for an existing query vs 404 for an unknown one — so existence is visible to grant-holders by design (the intended double-gate). The handler docstring, OpenAPI 404 description, and server.md all claimed the 404 was airtight against any denied actor. Correct the wording in all three (no behavior change) and add the missing symmetric test (invoke_query but no read -> 403 for an existing query, 404 for unknown) so the actual contract is pinned. Also document that in default-deny mode (tokens, no policy) every invocation 404s until an invoke_query rule is configured. Nits: the from_specs collision comment said "first declared wins" but it is lexicographically-first by name (BTreeMap); the effective_tool_name docstring overclaimed the CLI display routes through it (it resolves the rule on its own output DTO). * Default mcp.expose to true (the manifest entry is the opt-in) expose controls MCP-catalog membership only — it is not an authorization gate (invocation is gated by invoke_query regardless). So requiring a per-query mcp.expose: true was friction with no safety benefit: a non-exposed query is still HTTP-invocable by name. Flip the default so declaring a query in the manifest exposes it to the agent tool catalog by default; expose: false is the escape hatch for service-only queries. Both the absent-mcp path (Default impl) and the present-but-no-expose path (serde default fn) now yield true. Doc comments + cli-reference updated; the config round-trip test asserts the new default. * Add GET /queries stored-query catalog endpoint List a graph's mcp.expose stored queries as a typed tool catalog so a client (the MCP server) can register them as tools without fetching .gq source. Each entry carries name, MCP tool_name, description/instruction, a read/mutate flag, and decomposed typed params (kind enum: string|bool|int| bigint|float|date|datetime|blob|vector|list, plus item_kind for lists and vector_dim) — so the consumer builds an input schema with a closed match and never re-parses omnigraph type spelling. I64/U64 are bigint (string on the wire): a JSON number loses precision past 2^53 and the engine already accepts decimal strings. Read-gated (works in default-deny; the catalog is graph-wide, authorized against main). NOT Cedar-filtered per query yet — a reader can list a query whose invoke_query they lack (documented gap until per-query authz lands); invocation stays invoke_query-gated + deny==404. - api: QueriesCatalogOutput / QueryCatalogEntry / ParamDescriptor / ParamKind + query_catalog_entry (reuses PropType::from_param_type_name; scalar_kind is exhaustive, so a new ScalarType is a compile error here until catalogued). - GET /queries route in per_graph_protected (→ /graphs/{id}/queries in multi mode); OpenAPI regenerated; path allowlists updated. - Tests: projection unit (every kind, list, vector, nullable, mutation, empty) + handler (exposed-only filter, read-gate probe-oracle, empty registry). * docs: GET /queries stored-query catalog endpoint Document the catalog: the endpoint table row (GET /queries, read-gated), a catalog section (typed-param kind enum, bigint/date/datetime/blob-as-string, graph-wide/branch-independent, mcp.expose default true, the read-gated probe-oracle gap), and flip the startup note now that the catalog ships. * Collect file-I/O and parse errors in QueryRegistry::load in one pass load() early-returned on any unreadable .gq file, masking parse / identity / tool-name-collision errors in the OTHER (readable) files — so an operator fixed the missing file, restarted, and only then saw the next broken query. Now it collects I/O errors but still runs from_specs on the readable specs and returns the union, so every broken entry surfaces at once (matching the collected-errors contract the rest of the registry already follows). Safe: from_specs' tool-name collision check runs over loaded queries only, so dropping an I/O-failed entry can only under-report a collision, never invent one. I/O errors are ordered first (BTreeMap key order), then spec errors. Adds a load-level test (tempdir: a valid, a missing, and a parse-broken .gq) asserting all three surface in one Err — confirmed red before the fix. * Make invoke_query graph-scoped (one branch authority) invoke_query gates reaching the curated stored-query surface — a graph-level capability. Per-branch/snapshot access is already enforced by the inner read/change gate in run_query/run_mutate (authorized against the resolved branch), so branch-scoping the outer gate was redundant AND wrong for snapshot reads (it defaulted to main). Drop the branch dimension: remove InvokeQuery from uses_branch_scope (it joins admin as graph-scoped) and authorize the boundary gate with branch: None. Lossless: an actor confined to branch X by their read/change rules can still only invoke a stored query that touches X. A rule that sets branch_scope on invoke_query is now rejected by validate() — write invoke_query in its own rule. Ripple (atomic): restructure the server invoke fixture so invoke_query sits in its own branch_scope-free rule; invert invoke_query_is_branch_scoped -> invoke_query_rejects_branch_scope; the per-graph authorize test uses branch: None; docs (policy.md, server.md, the InvokeQuery doc). No wire/OpenAPI change. * Resolve graph config by identity, not server mode Which policy/queries block applies for a graph was decided three different, mode-dependent ways: single-mode boot used top-level even for a named graph; multi-mode used per-graph (and silently ignored a top-level queries block); the CLI used per-graph for a named target. So `queries validate --target prod` could check a different registry than the single-mode server loaded, and a named graph's per-graph policy/queries were silently shadowed. Make config a function of graph IDENTITY: a graph served by NAME (--target/server.graph, a graphs: entry) uses its own graphs.<name>.{policy, queries}; a bare URI is anonymous and uses top-level. One rule, applied by single-mode boot, multi-mode boot, and the CLI — so they can't diverge and the CLI predicts the server exactly. No silent ignore: serving a named graph while a top-level policy/queries block is populated now refuses boot, naming the block (the multi-mode top-level-policy bail, extended to queries and to single-mode-named). The CLI's `queries validate` derives the schema URI and the registry from ONE selection, and a positional URI forces anonymous (ignoring cli.graph) so the two can't come from different graphs. BREAKING (released behavior): single mode by name (--target/server.graph) with top-level policy/queries previously used top-level; it now uses the per-graph block and refuses boot if top-level is also populated. Bare-URI single mode is unchanged. Loud, with migration text pointing at graphs.<name>. - config: resolve_policy_file_for (policy sibling of query_entries_for, no top-level fallback) + populated_top_level_blocks for the coherence check. - characterization tests (single-mode named -> per-graph; named + top-level -> bail; multi-mode top-level queries -> bail; CLI positional-URI -> top-level). - docs: policy.md, server.md, cli-reference.md. * docs: RFC-002 credentials keyed by server name (keychain/profile/env) Reworks the RFC's credentials model: secrets are keyed by server name — OS keychain `omnigraph:<server>` (preferred) -> a `[<server>]` profile in `~/.omnigraph/credentials` -> `OMNIGRAPH_TOKEN[_<SERVER>]` env (CI), the AWS/gh/kube model. `servers.<name>` is endpoint-only by default but may carry an explicit, secret-free `auth: { token: { env|file|command|keychain } }` source. The shipped `bearer_token_env` + `.env.omni` dotenv remain a legacy compat path; no `credentials.yaml`. * docs: RFC-002 — typed graph locator (storage/server/graph_id), not a uri string Add §1.1: the resolved graph address is a typed GraphLocator (Embedded{storage} | Remote{server, graph_id}), not a flat uri: String. Diagnoses the string model's cost in the code today (~16 is_remote_uri forks, TargetConfig can't express multi-server x multi-graph, the CLI bails on remote, the ts SDK models baseUrl+graphId separately) and settles the YAML naming so the key names the locus: - storage: (embedded) — shipped uri: is a deprecated alias - server: + graph_id: (remote) — graph_id defaults to the entry key - storage xor server, reject both/neither (no silent ambiguity) Kills the graphs:/graph: collision and the uri:-might-be-a-server ambiguity. Updates the §1/§8 examples and the entry-shape notes to the new naming. * Test: queries list must reject an unknown --target queries list opens no graph URI, so unknown-graph validation does not ride along on resolve_target_uri the way it does for every other command. The new test reproduces the gap: with an unknown --target the command currently exits 0 and prints the (empty) top-level registry instead of erroring like the URI-resolving commands do. Fails against current code; the fix follows. * Validate the graph selection in queries list Graph-existence validation was a side effect of URI resolution: every URI-resolving command rejects an unknown --target via resolve_target_uri, but queries list opens no URI, so query_entries_for(Some(unknown)) silently fell back to the top-level registry and showed the wrong (or empty) catalog. Make membership a property of the selection: add the fallible resolve_graph_selection alongside the infallible query_entries_for (a known name passes through, an unknown name errors with the same message as resolve_target_uri, None stays anonymous), and validate the selection in execute_queries_list. query_entries_for is unchanged — server boot's bare-URI path still needs its None -> top-level arm. * Surface policy-engine errors from stored-query invoke The invoke handler mapped every authorize_request failure to 404 ('stored query not found'), which collapsed the authorization decision (deny -> 403) together with operational failures (no actor -> 401, Cedar evaluation error -> 500). A real policy-engine 500 was hidden as a missing query. Separate the two concerns instead of sniffing the masked status. Extract authorize() returning an Authz { Allowed, Denied(msg) } decision and reserve Err for operational failures only; authorize_request becomes a thin wrapper that maps Denied -> 403, so the 16 deny-as-403 callers are unchanged. The invoke handler now matches the decision directly: a denial stays 404 (deny == missing, so the catalog can't be probed without the grant), while a 401/500 propagates with its true status. 500 is now a reachable outcome on POST /queries/{name}; document it in the endpoint responses and regenerate openapi.json. * Extract the named-graph/top-level coherence rule into one helper The rule 'a named graph uses its own graphs.<name> block, so a populated top-level block is a config error' lived inline in single-mode server boot. Extract it to OmnigraphConfig::ensure_top_level_blocks_honored so the same definition can be shared by the CLI selection gate (next commit) and the two can't drift. Boot calls the helper; the message is reworded context-neutral (drops 'serving') so it reads correctly from both boot and the CLI. Behavior-preserving: multi-graph mode keeps its own unconditional check, and single_mode_named_graph_rejects_top_level_blocks still passes. * Test: queries validate/list must reject a named graph with a top-level block Server boot refuses a config where a graph is selected by name yet a top-level queries:/policy.file block is populated (the block would be silently ignored). The CLI's queries validate/list resolve the same named selection but skip that coherence check, so they give a false green / list the per-graph block. The new test reproduces it: validate prints OK and list succeeds where boot would refuse. Fails against current code; the fix follows. * Enforce top-level coherence in the single CLI selection gate queries validate validated graph membership only as a side effect of URI resolution and queries list only via resolve_graph_selection's membership check; neither applied the named-graph/top-level coherence rule server boot enforces, so both gave a false green on a config boot refuses. Fold ensure_top_level_blocks_honored into resolve_graph_selection so it is the single gate that returns only valid + server-coherent selections, and route resolve_selected_graph (queries validate) through it; queries list already calls the gate. A named graph with a populated top-level block now errors in both commands, matching boot. A positional URI stays anonymous (top-level honored), so queries_validate_positional_uri_ignores_default_graph is unaffected. * docs: RFC-003 — MCP server surface for omnigraph-server Detailed MCP-transport design for the stored-query/MCP work, building on the shipped #128 registry. Corrects the draft against the branch head: the coarse invoke_query gate + 404 denial-masking are already wired (server_invoke_query), so per-query invoke_query scope (PolicyRequest has no query-name dimension yet) is the real prerequisite; positions the doc as superseding rfc-001's MCP transport (/mcp/tools+/mcp/invoke) and reconciles the shipped mcp.expose YAML form and the schema-introspection non-goal; grounds the parity surface in the actual omnigraph-ts package (13 tools with read/change ids, 2 resources). * docs(config): clarify graph config boundaries * fix(config): enforce graph-scoped policies and query validation * fix(cli): require graph selection for scoped query registries * fix(server): preserve named graph id in single mode policy * fix(cli): share graph identity for policy resolution * test(cli): cover policy tooling server graph selection * fix(cli): honor server graph for policy tooling --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
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```rust
docs(rfc-003): fold external review into correct-by-design fixes An external review pass raised 8 findings; verified 7 valid (2 confirmed against the engine coercer). Folded them in as class-closing fixes rather than point patches: - §9.1 (③④, the headline): the JSON-Schema generator was a second hand-written copy of the engine's input contract — Blob (base64 vs URI string) and nullable (explicit null) were two drifts of one class. Move the projection to a single param_json_schema in omnigraph-api-types (next to ParamKind/ParamDescriptor), fix Blob -> {"type":"string","format":"uri"} (query_input.rs:449 / api-types:354 say blob-URI string) and nullable -> anyOf[..,null] (query_input.rs:273,296), and lock it to json_value_to_literal_typed with a schema/engine equivalence test so any future drift is a CI failure. - §7/§4 (①): replace the fail-open "empty allowed_origins => skip" with a total OriginPolicy and a single McpHostPolicy::from_bind constructor (remote default DenyBrowsers, enforced by origin_guard independent of rmcp's empty-list quirk). No absent-=>-skip state can be constructed. - §6/§12/§16 (②): make the non-paginated list seam a stated contract (Vec<T>, no nextCursor; meta mode bounds large catalogs) and drop the pagination claims the signature couldn't express. - §9.3 (⑦): built-in/stored tool-name collision becomes a cluster validate/boot error (fold built-in names into the registry uniqueness check), not a silent skip — per the invariants deny-list. - §9.2 (⑥): stored_query_mode folded into the one per-graph mcp: block (Phase 6), not a floating key; not configurable until that surface exists. - §10/§1 (⑧): scope derives from the per-graph mount; server-scoped `health` becomes graph-scoped `graph_health` (server liveness stays REST /healthz). - §13 (⑤, doc-only): OpenAI row corrected to the `authorization` field; Phase-1 reachability via static bearer is unchanged. §17 records the locked decisions; the validation header notes the review pass.
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// New — crates/omnigraph-api-types/src/lib.rs (next to ParamKind/ParamDescriptor)
use serde_json::{json, Value};
docs(rfc-003): fold external review into correct-by-design fixes An external review pass raised 8 findings; verified 7 valid (2 confirmed against the engine coercer). Folded them in as class-closing fixes rather than point patches: - §9.1 (③④, the headline): the JSON-Schema generator was a second hand-written copy of the engine's input contract — Blob (base64 vs URI string) and nullable (explicit null) were two drifts of one class. Move the projection to a single param_json_schema in omnigraph-api-types (next to ParamKind/ParamDescriptor), fix Blob -> {"type":"string","format":"uri"} (query_input.rs:449 / api-types:354 say blob-URI string) and nullable -> anyOf[..,null] (query_input.rs:273,296), and lock it to json_value_to_literal_typed with a schema/engine equivalence test so any future drift is a CI failure. - §7/§4 (①): replace the fail-open "empty allowed_origins => skip" with a total OriginPolicy and a single McpHostPolicy::from_bind constructor (remote default DenyBrowsers, enforced by origin_guard independent of rmcp's empty-list quirk). No absent-=>-skip state can be constructed. - §6/§12/§16 (②): make the non-paginated list seam a stated contract (Vec<T>, no nextCursor; meta mode bounds large catalogs) and drop the pagination claims the signature couldn't express. - §9.3 (⑦): built-in/stored tool-name collision becomes a cluster validate/boot error (fold built-in names into the registry uniqueness check), not a silent skip — per the invariants deny-list. - §9.2 (⑥): stored_query_mode folded into the one per-graph mcp: block (Phase 6), not a floating key; not configurable until that surface exists. - §10/§1 (⑧): scope derives from the per-graph mount; server-scoped `health` becomes graph-scoped `graph_health` (server liveness stays REST /healthz). - §13 (⑤, doc-only): OpenAI row corrected to the `authorization` field; Phase-1 reachability via static bearer is unchanged. §17 records the locked decisions; the validation header notes the review pass.
2026-06-16 17:34:00 +02:00
// Exhaustive, wildcard-free: adding a ParamKind is a COMPILE error until its arm
// (and its equivalence-test corpus row) exist — closing "new kind, wrong/default schema".
fn scalar_schema(kind: ParamKind) -> Value {
match kind {
ParamKind::String => json!({ "type": "string" }),
ParamKind::Bool => json!({ "type": "boolean" }),
ParamKind::Int => json!({ "type": "integer" }),
ParamKind::BigInt => json!({ "type": "string", "pattern": r"^-?\d+$" }), // i64/u64 lose precision >2^53 as JSON numbers
ParamKind::Float => json!({ "type": "number" }),
ParamKind::Date => json!({ "type": "string", "format": "date" }),
ParamKind::DateTime => json!({ "type": "string", "format": "date-time" }),
docs(rfc-003): fold external review into correct-by-design fixes An external review pass raised 8 findings; verified 7 valid (2 confirmed against the engine coercer). Folded them in as class-closing fixes rather than point patches: - §9.1 (③④, the headline): the JSON-Schema generator was a second hand-written copy of the engine's input contract — Blob (base64 vs URI string) and nullable (explicit null) were two drifts of one class. Move the projection to a single param_json_schema in omnigraph-api-types (next to ParamKind/ParamDescriptor), fix Blob -> {"type":"string","format":"uri"} (query_input.rs:449 / api-types:354 say blob-URI string) and nullable -> anyOf[..,null] (query_input.rs:273,296), and lock it to json_value_to_literal_typed with a schema/engine equivalence test so any future drift is a CI failure. - §7/§4 (①): replace the fail-open "empty allowed_origins => skip" with a total OriginPolicy and a single McpHostPolicy::from_bind constructor (remote default DenyBrowsers, enforced by origin_guard independent of rmcp's empty-list quirk). No absent-=>-skip state can be constructed. - §6/§12/§16 (②): make the non-paginated list seam a stated contract (Vec<T>, no nextCursor; meta mode bounds large catalogs) and drop the pagination claims the signature couldn't express. - §9.3 (⑦): built-in/stored tool-name collision becomes a cluster validate/boot error (fold built-in names into the registry uniqueness check), not a silent skip — per the invariants deny-list. - §9.2 (⑥): stored_query_mode folded into the one per-graph mcp: block (Phase 6), not a floating key; not configurable until that surface exists. - §10/§1 (⑧): scope derives from the per-graph mount; server-scoped `health` becomes graph-scoped `graph_health` (server liveness stays REST /healthz). - §13 (⑤, doc-only): OpenAI row corrected to the `authorization` field; Phase-1 reachability via static bearer is unchanged. §17 records the locked decisions; the validation header notes the review pass.
2026-06-16 17:34:00 +02:00
// FIX (③): the coercer takes Blob as a blob-URI STRING ("expected blob URI
// string", query_input.rs:449; DTO doc api-types:354) — NOT base64-decoded bytes.
ParamKind::Blob => json!({ "type": "string", "format": "uri" }),
ParamKind::Vector | ParamKind::List => unreachable!("composite kinds handled in param_json_schema"),
}
}
Stored-query registry foundation + config/CLI RFC-002 (#128) * MR-969: add stored-query registry config surface Introduce the `queries:` block in omnigraph.yaml — an inline `name -> entry` map of stored queries, per-graph (`graphs.<id>.queries`) and top-level for single-graph mode, mirroring how `policy` is wired in both modes. Each entry points at a `.gq` file and carries optional MCP exposure settings (`expose`, `tool_name`), defaulting to not-exposed. Additive: absent `queries:` leaves current behavior unchanged. - QueryEntry { file, mcp: McpSettings { expose, tool_name } } - `queries` field on TargetConfig + OmnigraphConfig (serde default) - query_entries() / target_query_entries() accessors - resolve_query_file() — base_dir-relative `.gq` path resolution - round-trip + absent-block tests Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add stored-query registry loader and GraphHandle wiring Add a `queries` module: QueryRegistry loads each declared `.gq` entry, parses it, and selects the query whose symbol matches the manifest key, asserting the two agree (key == `query <name>` symbol). Identity is the query name; a key/symbol mismatch is a load-time error. Errors are collected, not fail-fast, so a bad registry surfaces every broken entry at once. Schema type-checking is deliberately left to a separate pass so the loader stays callable without an open engine. Thread an `Option<Arc<QueryRegistry>>` through GraphHandle alongside the per-graph policy; the URI-canonicalizing clone propagates it. Production openers default to None for now — the boot path loads and attaches the registry in a later change. - QueryRegistry::{from_specs, load, lookup, iter}; StoredQuery::is_mutation - GraphHandle.queries field, propagated on canonical clone - registry unit tests: identity match/mismatch, multi-query selection, per-entry parse errors, error collection, mutation classification Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: add RFC-002 config & CLI architecture Layered config (user-global ~/.config/omnigraph/ + per-project), a unifying `target` abstraction resolving to (locus, graph, sub-state, credential) with embedded-URI XOR remote-server loci, multi-server × multi-graph client targeting, credentials by-reference, and the file-naming decision: project and server config are one artifact (`omnigraph.yaml`); the only differently-named file is the user-global `config.yaml`, split by scope not role. Includes the 12-factor bind portability rule (prefer --bind/OMNIGRAPH_BIND over a committed server.bind) and the defined-locally / invoked-remotely model for stored queries. Derived from first principles working backwards from what the engine enables; validated against kube/Helix/git/compose. Linked from docs/dev/index.md. Proposed; phased rollout for the MR-973/974/981 family. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add check() to validate stored queries against the live schema A pure check(registry, catalog) that type-checks every stored query via the same typecheck_query_decl the engine runs for inline queries — no parallel implementation. Failures are collected, not fail-fast, so an operator sees every broken query (e.g. a type/property a migration renamed or removed) in one pass. Breakages are fatal (the boot path will refuse to start); warnings are advisory. Pure over (registry, catalog) so it is callable both at boot (engine catalog) and offline from the CLI without an open engine. Advisory lint: an mcp.expose:true query that declares a Vector(N) parameter warns — an LLM cannot supply a raw embedding vector; such a query should take a String parameter and embed server-side. Warns rather than rejects, since service-to-service callers may pass vectors. - CheckReport { breakages, warnings }; has_breakages / is_clean - tests: valid query, unknown type, unknown property, collect-not-fail-fast, vector-param-exposed warns, unexposed silent Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Drop internal plan-label refs from stored-query config comments Doc comments referenced sequencing labels ("C2") that mean nothing to a reader; reword to describe the behavior directly. Comment-only. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile aliases with the role model in RFC-002 Place the existing client-only `aliases:` block in the client/server role split: aliases are client-role (CLI, embedded, ungated) and may live in both user-global and project config; `queries:` is server-role (deployment manifest only). They overlap as "name -> .gq"; `queries:` is the superset, and the end-state subsumes aliases (definition -> queries, target/branch/format -> client invocation context, positional args -> CLI sugar). v1 keeps aliases unchanged. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: make RFC-002 config global-first, project-optional The global user config is the primary, self-sufficient default; the CLI works from any directory with no project file (the kubectl/aws/gh posture), a deliberate flip from today's project-anchored behavior. The project omnigraph.yaml becomes an optional repo-scoped override and the deployment manifest. Uniform schema, both layers optional; global can hold any section including a personal server's graphs/queries. Additive: project still overrides global; the flip adds a fallback layer below the project file rather than removing it. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: justify XDG ~/.config/omnigraph over legacy ~/.omnigraph in RFC-002 Make the rationale explicit: XDG-first because OmniGraph is a client that will cache remote catalogs and keep session state alongside secrets, and XDG separates config / cache / state into distinct dirs (clear cache without touching creds; backups skip cache) whereas a single ~/.omnigraph/ mixes them. Honor ~/.omnigraph/ as a fallback for the peer-group (aws/kube/docker/helix) expectation. Add XDG_CACHE_HOME / XDG_STATE_HOME to the override precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: build RFC-002 credentials on the existing env-file mechanism OmniGraph already has credentials-by-reference: bearer_token_env names the env var, and auth.env_file is a git-ignored dotenv the CLI auto-loads (real env vars win), resolved via resolve_remote_bearer_token. The RFC's proposed credentials.yaml + token_env were redundant parallel inventions. Reconcile: reuse bearer_token_env (extend to servers.<name>) and auth.env_file (add a global ~/.config/omnigraph/.env layered under the project .env.omni); OS keychain is an additive future resolver. No new credentials.yaml. Updated summary, non-goals, background, file-naming, credentials, example, login, migration, rollout. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: use single ~/.omnigraph dir (Helix-style), not XDG, in RFC-002 Reverse the earlier XDG-first call. The prior argument rested on a false dichotomy (single-dir => mixed config/cache/state); in fact the peer tools (aws, kube, helix) achieve separation via SUBDIRECTORIES inside one ~/.tool/ dir (~/.aws/sso/cache/, ~/.kube/cache/), getting cache hygiene AND one discoverable place. So everything goes under ~/.omnigraph/: config.yaml, credentials (dotenv, 0600), cache/, state/. Lower cognitive load, matches what DB/cloud-CLI users expect, matches Helix. OMNIGRAPH_HOME overrides; $XDG_CONFIG_HOME optionally honored but ~/.omnigraph/ is canonical. Updated all paths, the rationale paragraph, the file-naming table (added a cache/state row), and env precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile RFC-002 with shipped/planned CLI tickets Align with reality found in existing tickets: - Noun is graph/graphs, not target/targets (MR-603 done renamed the config key targets->graphs, flag --graph). Use graphs:/--graph; an entry is embedded (uri) XOR remote (server + remote graph name). - ~/.omnigraph/ confirmed by MR-581 (og template pull, done) which already quick-starts templates there. - Templates already exist (MR-581/MR-531) — not invented here. - The init family is already specced (init, quickstart MR-973, serve MR-970, prune MR-972, mcp install MR-974, agent-mode MR-981); this RFC only adds the user route (~/.omnigraph/config.yaml + login). - aliases: -> operations: planned (MR-839). - bearer_token_env gap tracked in MR-971. - query lint/check already exist (MR-639) — registry validator must not collide with the singular `query check`. Add a Reconciliation section; fix the canonical example to graphs:/--graph. Also: merge semantics refined (deep-merge settings, replace named entries, replace lists, config view --resolved --show-origin). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: correct stale-ticket claims and fold init/bootstrap design into RFC-002 Verify against code, not ticket statuses (MR-581 is marked done but is stale/unbuilt): no ~/.omnigraph usage, no template/serve/quickstart/ prune/login commands exist; config still uses aliases: (no operations:). So ~/.omnigraph/ stands on peer-convention merits alone, and templates are a design question, not a foothold. Add §7.5: the three-tier init model (user route = login + ~/.omnigraph/config.yaml; thin project init; fat quickstart + templates) with first-principles positions (split init/login, in-place refuse-if-exists, interactive vs --auto/agent-mode, --template flag, secrets-on-scaffold gitignore rule). This RFC owns only the user route; the rest are sibling tickets (MR-973/970/972/974/981). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: breadboard + slice Shape A in RFC-002 Add the implementation breadboard (places P1-P5, affordances N1-N14 with NEW markers, mermaid) and five vertical slices for the selected config/ CLI/init shape: V1 global layer + merge engine + config view; V2 remote graphs + HTTP-client path + credential resolution; V3 omnigraph login; V4 init-hardening + quickstart + templates (rides MR-970); V5 agent-mode (MR-981). Rollout reordered to the slice sequence; spikes X1-X4 gate their owning slice. V1-V2 close the substantive client->server gap. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add InvokeQuery Cedar action (coarse, graph-scoped) A per-graph, branch-scoped action that gates invoking a server-side stored query by name. Coarse for now: an `invoke_query` allow rule permits any stored query on the graph; a future, additive refinement adds an optional per-query-name scope without changing rules written against the coarse action. Enforcement is at the HTTP boundary; the engine `_as` writers still enforce read/change per the query body, so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). No call site yet — the invocation handler wires it in a later change (same pattern as Admin/GraphList added ahead of consumers). - variant + as_str/resource_kind(Graph)/FromStr/uses_branch_scope - Cedar schema: invoke_query appliesTo Graph - tests: per-graph allow/deny, branch-scope accepted Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Load and type-check stored queries at server boot, refusing breakage At startup the server now loads each graph's stored-query registry, type-checks every query against that graph's live schema, and refuses to boot if any query references a type/property the schema doesn't have (same posture as bad policy YAML) — so schema drift surfaces at the deploy boundary, not silently at invocation. Non-blocking warnings are logged. The validated registry is attached to the GraphHandle (the two production sites previously held `queries: None`). Loading (parse + key==symbol identity) happens at settings-build time where the config is in scope; the schema type-check happens after each engine opens (single mode in `open_single_with_queries`, multi mode in `open_single_graph`). `open_with_bearer_tokens_and_policy` delegates with an empty registry so its 18 test callers are unchanged; the public `new_*` constructors are unchanged (only the private build path threads the registry). - ServerConfigMode::Single / GraphStartupConfig carry the loaded registry - boot tests: valid registry boots; type-broken query refuses boot + names it Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add `omnigraph queries validate` and `queries list` CLI `queries validate` type-checks the stored-query registry against the live schema offline — it opens the selected graph, runs the same check() the server runs at boot, prints breakages/warnings (human or --json), and exits non-zero on any breakage — so an operator can catch a query broken by a schema change without restarting the server. `queries list` prints each registered query's name, MCP exposure, and typed params. Named `validate` (not `check`) to avoid overlap with the existing `omnigraph lint` — `query check`/`query lint` are already deprecated argv-shims to `lint`. Registry entries resolve like the server: a named graph uses its per-graph `queries:`; otherwise the top-level one. - Queries subcommand group; reuses QueryRegistry::load + check from omnigraph-server; local-only (needs the schema), mirrors lint - tests: clean registry exits 0, broken query exits non-zero + names it, list shows the query and its typed params Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Route registry selection through one shared query_entries_for The "which queries: block applies for graph X" rule existed twice — the server boot path and the CLI's registry_entries — and had already drifted: the CLI carried an unreachable unwrap_or_else fallback the server lacked. Add OmnigraphConfig::query_entries_for(graph: Option<&str>) as the single definition (named graph -> its per-graph block; otherwise top-level) and route all three sites through it: server single mode, server multi-graph loop, and the CLI. The CLI's dead fallback arm is deleted; CLI and server now resolve identically by construction. No behavior change. Extends the config round-trip test to pin the selector, including the unknown-name -> top-level fallback the deleted CLI arm covered. * Funnel registry validation through one validate_and_attach gate The check -> refuse-on-breakage -> log-warnings -> empty->None block was copy-pasted across both open paths (single mode and the multi-graph per-graph open), differing only by the graph label. A third opener could attach a registry that was never schema-checked. Extract validate_and_attach(queries, catalog, label) -> Option<Arc<..>> as the single gate both paths call, so attaching an unchecked registry is no longer expressible. The catalog handle is an owned Arc, so calling it before the multi-mode policy match (which rebinds db) is borrow-clean. No behavior change. Adds a direct unit test of the helper (empty / clean / breakage incl. the graph label in the message) — covering the multi-graph path's logic, which previously had no boot-refusal coverage. * Resolve param types structurally in the MCP vector lint The exposed-query advisory detected vector params with type_name.starts_with("Vector(") — a second copy of the compiler's own ScalarType::from_str_name vector parsing that could drift from it. Key the lint off PropType::from_param_type_name + ScalarType::Vector(_) instead, the one canonical resolver the type system already uses. Any future param-suppliability lint now reads the structured type rather than scanning the surface string. Behavior-preserving: the grammar forbids list-of-vector params (list_type = "[" base_type "]", and base_type excludes Vector), so the only input where the structured and string checks could differ is unparseable. Adds a guard test that an exposed String param does not false-trigger the warning. * Refuse duplicate MCP tool names across exposed stored queries The effective MCP tool name (explicit tool_name, else the query name) is a second identity namespace beside the registry key, but nothing enforced it unique — two exposed queries could claim one catalog key, and each consumer re-derived the name ad hoc. Add StoredQuery::effective_tool_name() as the one definition, and a load-time uniqueness pass in from_specs over exposed queries: a collision is a collected LoadError naming the loser and the winner. Scoped to exposed queries (unexposed have no MCP tool); deterministic over the BTreeMap so the first-declared wins and the error order is stable. New (rare) refusal: a config with colliding exposed tool names now fails `omnigraph queries validate` offline and refuses server boot, the same posture as a malformed registry. Release-note-worthy. Test-first: duplicate_exposed_tool_name_is_a_load_error (red before the pass, green after) + a CLI offline test; the unexposed sibling pins the exposed-only scope; effective_tool_name asserts folded into the load test. * docs: document the queries registry, CLI, and invoke_query action The stored-query surface shipped without user docs. Add it, per the same-PR maintenance contract: - policy.md: invoke_query as per-graph action #10 (branch-scoped), with the double-gating note; renumber graph_list; add it to the branch_scope list. - cli-reference.md: the `queries validate | list` command, and the `queries:` config block (per-graph + top-level) with mcp.expose/tool_name and the tool-name uniqueness rule. - server.md: boot-time stored-query type-check (refuse on breakage), noting invocation over HTTP/MCP is not yet exposed. * Add POST /queries/{name} stored-query invocation handler Invoke a curated server-side stored query by name: source + name come from the per-graph queries: registry, the client sends only runtime inputs (params, branch, snapshot). Gated by the invoke_query Cedar action at the boundary; the handler delegates to the existing run_query/run_mutate, whose inner Read/Change enforce still runs — so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). - InvokeStoredQueryRequest + an untagged InvokeStoredQueryResponse { Read(ReadOutput), Change(ChangeOutput) } → one Json<_> return type and a oneOf 200 schema (a correct contract, not a wrong-but-simple one). - Route lives in per_graph_protected → single-mode /queries/{name} and multi-mode /graphs/{id}/queries/{name} for free. - Deny == unknown: an invoke_query denial and a missing query both return the same 404, so the catalog can't be probed by an unauthorized caller. - OpenAPI regenerated; tests cover read, mutation double-gate (403 vs 200), bad-param 400, and the identical-404 deny path. Completes the MR-969 V1 invocation slice (registry + /queries/{name} + invoke_query). * docs: stored-query invocation endpoint; flip the not-yet-exposed caveat Now that POST /queries/{name} ships (C7), document it: add the endpoint to server.md's inventory + an invocation section (body, untagged read/mutate envelope, invoke_query gate, double-gated mutations, deny == 404), and flip the startup note that said invocation was not yet exposed. In policy.md, replace "no invocation call site yet" on the invoke_query action with a pointer to the endpoint. * Scope the stored-query 404-hiding claim to non-invoke_query callers Review found the deny==404 catalog-hiding was overstated as a contract: it holds only at the outer invoke_query gate. A caller that HOLDS invoke_query but lacks read/change gets the inner gate's 403 for an existing query vs 404 for an unknown one — so existence is visible to grant-holders by design (the intended double-gate). The handler docstring, OpenAPI 404 description, and server.md all claimed the 404 was airtight against any denied actor. Correct the wording in all three (no behavior change) and add the missing symmetric test (invoke_query but no read -> 403 for an existing query, 404 for unknown) so the actual contract is pinned. Also document that in default-deny mode (tokens, no policy) every invocation 404s until an invoke_query rule is configured. Nits: the from_specs collision comment said "first declared wins" but it is lexicographically-first by name (BTreeMap); the effective_tool_name docstring overclaimed the CLI display routes through it (it resolves the rule on its own output DTO). * Default mcp.expose to true (the manifest entry is the opt-in) expose controls MCP-catalog membership only — it is not an authorization gate (invocation is gated by invoke_query regardless). So requiring a per-query mcp.expose: true was friction with no safety benefit: a non-exposed query is still HTTP-invocable by name. Flip the default so declaring a query in the manifest exposes it to the agent tool catalog by default; expose: false is the escape hatch for service-only queries. Both the absent-mcp path (Default impl) and the present-but-no-expose path (serde default fn) now yield true. Doc comments + cli-reference updated; the config round-trip test asserts the new default. * Add GET /queries stored-query catalog endpoint List a graph's mcp.expose stored queries as a typed tool catalog so a client (the MCP server) can register them as tools without fetching .gq source. Each entry carries name, MCP tool_name, description/instruction, a read/mutate flag, and decomposed typed params (kind enum: string|bool|int| bigint|float|date|datetime|blob|vector|list, plus item_kind for lists and vector_dim) — so the consumer builds an input schema with a closed match and never re-parses omnigraph type spelling. I64/U64 are bigint (string on the wire): a JSON number loses precision past 2^53 and the engine already accepts decimal strings. Read-gated (works in default-deny; the catalog is graph-wide, authorized against main). NOT Cedar-filtered per query yet — a reader can list a query whose invoke_query they lack (documented gap until per-query authz lands); invocation stays invoke_query-gated + deny==404. - api: QueriesCatalogOutput / QueryCatalogEntry / ParamDescriptor / ParamKind + query_catalog_entry (reuses PropType::from_param_type_name; scalar_kind is exhaustive, so a new ScalarType is a compile error here until catalogued). - GET /queries route in per_graph_protected (→ /graphs/{id}/queries in multi mode); OpenAPI regenerated; path allowlists updated. - Tests: projection unit (every kind, list, vector, nullable, mutation, empty) + handler (exposed-only filter, read-gate probe-oracle, empty registry). * docs: GET /queries stored-query catalog endpoint Document the catalog: the endpoint table row (GET /queries, read-gated), a catalog section (typed-param kind enum, bigint/date/datetime/blob-as-string, graph-wide/branch-independent, mcp.expose default true, the read-gated probe-oracle gap), and flip the startup note now that the catalog ships. * Collect file-I/O and parse errors in QueryRegistry::load in one pass load() early-returned on any unreadable .gq file, masking parse / identity / tool-name-collision errors in the OTHER (readable) files — so an operator fixed the missing file, restarted, and only then saw the next broken query. Now it collects I/O errors but still runs from_specs on the readable specs and returns the union, so every broken entry surfaces at once (matching the collected-errors contract the rest of the registry already follows). Safe: from_specs' tool-name collision check runs over loaded queries only, so dropping an I/O-failed entry can only under-report a collision, never invent one. I/O errors are ordered first (BTreeMap key order), then spec errors. Adds a load-level test (tempdir: a valid, a missing, and a parse-broken .gq) asserting all three surface in one Err — confirmed red before the fix. * Make invoke_query graph-scoped (one branch authority) invoke_query gates reaching the curated stored-query surface — a graph-level capability. Per-branch/snapshot access is already enforced by the inner read/change gate in run_query/run_mutate (authorized against the resolved branch), so branch-scoping the outer gate was redundant AND wrong for snapshot reads (it defaulted to main). Drop the branch dimension: remove InvokeQuery from uses_branch_scope (it joins admin as graph-scoped) and authorize the boundary gate with branch: None. Lossless: an actor confined to branch X by their read/change rules can still only invoke a stored query that touches X. A rule that sets branch_scope on invoke_query is now rejected by validate() — write invoke_query in its own rule. Ripple (atomic): restructure the server invoke fixture so invoke_query sits in its own branch_scope-free rule; invert invoke_query_is_branch_scoped -> invoke_query_rejects_branch_scope; the per-graph authorize test uses branch: None; docs (policy.md, server.md, the InvokeQuery doc). No wire/OpenAPI change. * Resolve graph config by identity, not server mode Which policy/queries block applies for a graph was decided three different, mode-dependent ways: single-mode boot used top-level even for a named graph; multi-mode used per-graph (and silently ignored a top-level queries block); the CLI used per-graph for a named target. So `queries validate --target prod` could check a different registry than the single-mode server loaded, and a named graph's per-graph policy/queries were silently shadowed. Make config a function of graph IDENTITY: a graph served by NAME (--target/server.graph, a graphs: entry) uses its own graphs.<name>.{policy, queries}; a bare URI is anonymous and uses top-level. One rule, applied by single-mode boot, multi-mode boot, and the CLI — so they can't diverge and the CLI predicts the server exactly. No silent ignore: serving a named graph while a top-level policy/queries block is populated now refuses boot, naming the block (the multi-mode top-level-policy bail, extended to queries and to single-mode-named). The CLI's `queries validate` derives the schema URI and the registry from ONE selection, and a positional URI forces anonymous (ignoring cli.graph) so the two can't come from different graphs. BREAKING (released behavior): single mode by name (--target/server.graph) with top-level policy/queries previously used top-level; it now uses the per-graph block and refuses boot if top-level is also populated. Bare-URI single mode is unchanged. Loud, with migration text pointing at graphs.<name>. - config: resolve_policy_file_for (policy sibling of query_entries_for, no top-level fallback) + populated_top_level_blocks for the coherence check. - characterization tests (single-mode named -> per-graph; named + top-level -> bail; multi-mode top-level queries -> bail; CLI positional-URI -> top-level). - docs: policy.md, server.md, cli-reference.md. * docs: RFC-002 credentials keyed by server name (keychain/profile/env) Reworks the RFC's credentials model: secrets are keyed by server name — OS keychain `omnigraph:<server>` (preferred) -> a `[<server>]` profile in `~/.omnigraph/credentials` -> `OMNIGRAPH_TOKEN[_<SERVER>]` env (CI), the AWS/gh/kube model. `servers.<name>` is endpoint-only by default but may carry an explicit, secret-free `auth: { token: { env|file|command|keychain } }` source. The shipped `bearer_token_env` + `.env.omni` dotenv remain a legacy compat path; no `credentials.yaml`. * docs: RFC-002 — typed graph locator (storage/server/graph_id), not a uri string Add §1.1: the resolved graph address is a typed GraphLocator (Embedded{storage} | Remote{server, graph_id}), not a flat uri: String. Diagnoses the string model's cost in the code today (~16 is_remote_uri forks, TargetConfig can't express multi-server x multi-graph, the CLI bails on remote, the ts SDK models baseUrl+graphId separately) and settles the YAML naming so the key names the locus: - storage: (embedded) — shipped uri: is a deprecated alias - server: + graph_id: (remote) — graph_id defaults to the entry key - storage xor server, reject both/neither (no silent ambiguity) Kills the graphs:/graph: collision and the uri:-might-be-a-server ambiguity. Updates the §1/§8 examples and the entry-shape notes to the new naming. * Test: queries list must reject an unknown --target queries list opens no graph URI, so unknown-graph validation does not ride along on resolve_target_uri the way it does for every other command. The new test reproduces the gap: with an unknown --target the command currently exits 0 and prints the (empty) top-level registry instead of erroring like the URI-resolving commands do. Fails against current code; the fix follows. * Validate the graph selection in queries list Graph-existence validation was a side effect of URI resolution: every URI-resolving command rejects an unknown --target via resolve_target_uri, but queries list opens no URI, so query_entries_for(Some(unknown)) silently fell back to the top-level registry and showed the wrong (or empty) catalog. Make membership a property of the selection: add the fallible resolve_graph_selection alongside the infallible query_entries_for (a known name passes through, an unknown name errors with the same message as resolve_target_uri, None stays anonymous), and validate the selection in execute_queries_list. query_entries_for is unchanged — server boot's bare-URI path still needs its None -> top-level arm. * Surface policy-engine errors from stored-query invoke The invoke handler mapped every authorize_request failure to 404 ('stored query not found'), which collapsed the authorization decision (deny -> 403) together with operational failures (no actor -> 401, Cedar evaluation error -> 500). A real policy-engine 500 was hidden as a missing query. Separate the two concerns instead of sniffing the masked status. Extract authorize() returning an Authz { Allowed, Denied(msg) } decision and reserve Err for operational failures only; authorize_request becomes a thin wrapper that maps Denied -> 403, so the 16 deny-as-403 callers are unchanged. The invoke handler now matches the decision directly: a denial stays 404 (deny == missing, so the catalog can't be probed without the grant), while a 401/500 propagates with its true status. 500 is now a reachable outcome on POST /queries/{name}; document it in the endpoint responses and regenerate openapi.json. * Extract the named-graph/top-level coherence rule into one helper The rule 'a named graph uses its own graphs.<name> block, so a populated top-level block is a config error' lived inline in single-mode server boot. Extract it to OmnigraphConfig::ensure_top_level_blocks_honored so the same definition can be shared by the CLI selection gate (next commit) and the two can't drift. Boot calls the helper; the message is reworded context-neutral (drops 'serving') so it reads correctly from both boot and the CLI. Behavior-preserving: multi-graph mode keeps its own unconditional check, and single_mode_named_graph_rejects_top_level_blocks still passes. * Test: queries validate/list must reject a named graph with a top-level block Server boot refuses a config where a graph is selected by name yet a top-level queries:/policy.file block is populated (the block would be silently ignored). The CLI's queries validate/list resolve the same named selection but skip that coherence check, so they give a false green / list the per-graph block. The new test reproduces it: validate prints OK and list succeeds where boot would refuse. Fails against current code; the fix follows. * Enforce top-level coherence in the single CLI selection gate queries validate validated graph membership only as a side effect of URI resolution and queries list only via resolve_graph_selection's membership check; neither applied the named-graph/top-level coherence rule server boot enforces, so both gave a false green on a config boot refuses. Fold ensure_top_level_blocks_honored into resolve_graph_selection so it is the single gate that returns only valid + server-coherent selections, and route resolve_selected_graph (queries validate) through it; queries list already calls the gate. A named graph with a populated top-level block now errors in both commands, matching boot. A positional URI stays anonymous (top-level honored), so queries_validate_positional_uri_ignores_default_graph is unaffected. * docs: RFC-003 — MCP server surface for omnigraph-server Detailed MCP-transport design for the stored-query/MCP work, building on the shipped #128 registry. Corrects the draft against the branch head: the coarse invoke_query gate + 404 denial-masking are already wired (server_invoke_query), so per-query invoke_query scope (PolicyRequest has no query-name dimension yet) is the real prerequisite; positions the doc as superseding rfc-001's MCP transport (/mcp/tools+/mcp/invoke) and reconciles the shipped mcp.expose YAML form and the schema-introspection non-goal; grounds the parity surface in the actual omnigraph-ts package (13 tools with read/change ids, 2 resources). * docs(config): clarify graph config boundaries * fix(config): enforce graph-scoped policies and query validation * fix(cli): require graph selection for scoped query registries * fix(server): preserve named graph id in single mode policy * fix(cli): share graph identity for policy resolution * test(cli): cover policy tooling server graph selection * fix(cli): honor server graph for policy tooling --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-01 22:50:31 +02:00
docs(rfc-003): fold external review into correct-by-design fixes An external review pass raised 8 findings; verified 7 valid (2 confirmed against the engine coercer). Folded them in as class-closing fixes rather than point patches: - §9.1 (③④, the headline): the JSON-Schema generator was a second hand-written copy of the engine's input contract — Blob (base64 vs URI string) and nullable (explicit null) were two drifts of one class. Move the projection to a single param_json_schema in omnigraph-api-types (next to ParamKind/ParamDescriptor), fix Blob -> {"type":"string","format":"uri"} (query_input.rs:449 / api-types:354 say blob-URI string) and nullable -> anyOf[..,null] (query_input.rs:273,296), and lock it to json_value_to_literal_typed with a schema/engine equivalence test so any future drift is a CI failure. - §7/§4 (①): replace the fail-open "empty allowed_origins => skip" with a total OriginPolicy and a single McpHostPolicy::from_bind constructor (remote default DenyBrowsers, enforced by origin_guard independent of rmcp's empty-list quirk). No absent-=>-skip state can be constructed. - §6/§12/§16 (②): make the non-paginated list seam a stated contract (Vec<T>, no nextCursor; meta mode bounds large catalogs) and drop the pagination claims the signature couldn't express. - §9.3 (⑦): built-in/stored tool-name collision becomes a cluster validate/boot error (fold built-in names into the registry uniqueness check), not a silent skip — per the invariants deny-list. - §9.2 (⑥): stored_query_mode folded into the one per-graph mcp: block (Phase 6), not a floating key; not configurable until that surface exists. - §10/§1 (⑧): scope derives from the per-graph mount; server-scoped `health` becomes graph-scoped `graph_health` (server liveness stays REST /healthz). - §13 (⑤, doc-only): OpenAI row corrected to the `authorization` field; Phase-1 reachability via static bearer is unchanged. §17 records the locked decisions; the validation header notes the review pass.
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// The one entry point the MCP crate calls — applies the nullable rule uniformly.
pub fn param_json_schema(p: &ParamDescriptor) -> Value {
let base = match p.kind {
ParamKind::Vector => {
let mut s = json!({ "type": "array", "items": { "type": "number" } });
if let Some(dim) = p.vector_dim { s["minItems"] = json!(dim); s["maxItems"] = json!(dim); }
s
}
ParamKind::List => json!({ "type": "array", "items": p.item_kind.map(scalar_schema).unwrap_or_else(|| json!({"type":"string"})) }),
scalar => scalar_schema(scalar),
docs(rfc-003): fold external review into correct-by-design fixes An external review pass raised 8 findings; verified 7 valid (2 confirmed against the engine coercer). Folded them in as class-closing fixes rather than point patches: - §9.1 (③④, the headline): the JSON-Schema generator was a second hand-written copy of the engine's input contract — Blob (base64 vs URI string) and nullable (explicit null) were two drifts of one class. Move the projection to a single param_json_schema in omnigraph-api-types (next to ParamKind/ParamDescriptor), fix Blob -> {"type":"string","format":"uri"} (query_input.rs:449 / api-types:354 say blob-URI string) and nullable -> anyOf[..,null] (query_input.rs:273,296), and lock it to json_value_to_literal_typed with a schema/engine equivalence test so any future drift is a CI failure. - §7/§4 (①): replace the fail-open "empty allowed_origins => skip" with a total OriginPolicy and a single McpHostPolicy::from_bind constructor (remote default DenyBrowsers, enforced by origin_guard independent of rmcp's empty-list quirk). No absent-=>-skip state can be constructed. - §6/§12/§16 (②): make the non-paginated list seam a stated contract (Vec<T>, no nextCursor; meta mode bounds large catalogs) and drop the pagination claims the signature couldn't express. - §9.3 (⑦): built-in/stored tool-name collision becomes a cluster validate/boot error (fold built-in names into the registry uniqueness check), not a silent skip — per the invariants deny-list. - §9.2 (⑥): stored_query_mode folded into the one per-graph mcp: block (Phase 6), not a floating key; not configurable until that surface exists. - §10/§1 (⑧): scope derives from the per-graph mount; server-scoped `health` becomes graph-scoped `graph_health` (server liveness stays REST /healthz). - §13 (⑤, doc-only): OpenAI row corrected to the `authorization` field; Phase-1 reachability via static bearer is unchanged. §17 records the locked decisions; the validation header notes the review pass.
2026-06-16 17:34:00 +02:00
};
// FIX (④): the coercer accepts explicit `null` for a nullable param AND its
// omission (query_input.rs:273,296). `required` alone only covers omission; a
// strictly-validating client (or SEP-1303 input validation) would reject `null`
// against the bare scalar. Allow null at the schema level for nullable params.
if p.nullable { json!({ "anyOf": [ base, { "type": "null" } ] }) } else { base }
}
```
docs(rfc-003): fold external review into correct-by-design fixes An external review pass raised 8 findings; verified 7 valid (2 confirmed against the engine coercer). Folded them in as class-closing fixes rather than point patches: - §9.1 (③④, the headline): the JSON-Schema generator was a second hand-written copy of the engine's input contract — Blob (base64 vs URI string) and nullable (explicit null) were two drifts of one class. Move the projection to a single param_json_schema in omnigraph-api-types (next to ParamKind/ParamDescriptor), fix Blob -> {"type":"string","format":"uri"} (query_input.rs:449 / api-types:354 say blob-URI string) and nullable -> anyOf[..,null] (query_input.rs:273,296), and lock it to json_value_to_literal_typed with a schema/engine equivalence test so any future drift is a CI failure. - §7/§4 (①): replace the fail-open "empty allowed_origins => skip" with a total OriginPolicy and a single McpHostPolicy::from_bind constructor (remote default DenyBrowsers, enforced by origin_guard independent of rmcp's empty-list quirk). No absent-=>-skip state can be constructed. - §6/§12/§16 (②): make the non-paginated list seam a stated contract (Vec<T>, no nextCursor; meta mode bounds large catalogs) and drop the pagination claims the signature couldn't express. - §9.3 (⑦): built-in/stored tool-name collision becomes a cluster validate/boot error (fold built-in names into the registry uniqueness check), not a silent skip — per the invariants deny-list. - §9.2 (⑥): stored_query_mode folded into the one per-graph mcp: block (Phase 6), not a floating key; not configurable until that surface exists. - §10/§1 (⑧): scope derives from the per-graph mount; server-scoped `health` becomes graph-scoped `graph_health` (server liveness stays REST /healthz). - §13 (⑤, doc-only): OpenAI row corrected to the `authorization` field; Phase-1 reachability via static bearer is unchanged. §17 records the locked decisions; the validation header notes the review pass.
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**The lock — an equivalence test (the by-design closure), in the compiler crate** (it
sees both the coercer and `param_json_schema`): for a fixed accept/reject corpus per
`ParamKind` (incl. a blob-URI string, a base64 blob *that must now validate as a plain
string*, `null` for nullable vs non-nullable, an over/under-length vector), assert
`schema_accepts(v) == json_value_to_literal_typed(name, v, kind, mode).is_ok()`. Any
future arm that diverges from the engine — base64 creeping back, a missing null-union, a
new kind without a schema — turns the test red. That test, not reviewer vigilance, is
what makes the schema correct *by construction*.
### 9.2 Two projection modes (small vs large catalogs)
Tool-overload is real: model accuracy degrades sharply as a single client's tool
count climbs past a few dozen, and clients that don't defer tool loading (e.g.
OpenCode) pay the full `tools/list` token cost. So the projection has two modes,
docs(rfc-003): fold external review into correct-by-design fixes An external review pass raised 8 findings; verified 7 valid (2 confirmed against the engine coercer). Folded them in as class-closing fixes rather than point patches: - §9.1 (③④, the headline): the JSON-Schema generator was a second hand-written copy of the engine's input contract — Blob (base64 vs URI string) and nullable (explicit null) were two drifts of one class. Move the projection to a single param_json_schema in omnigraph-api-types (next to ParamKind/ParamDescriptor), fix Blob -> {"type":"string","format":"uri"} (query_input.rs:449 / api-types:354 say blob-URI string) and nullable -> anyOf[..,null] (query_input.rs:273,296), and lock it to json_value_to_literal_typed with a schema/engine equivalence test so any future drift is a CI failure. - §7/§4 (①): replace the fail-open "empty allowed_origins => skip" with a total OriginPolicy and a single McpHostPolicy::from_bind constructor (remote default DenyBrowsers, enforced by origin_guard independent of rmcp's empty-list quirk). No absent-=>-skip state can be constructed. - §6/§12/§16 (②): make the non-paginated list seam a stated contract (Vec<T>, no nextCursor; meta mode bounds large catalogs) and drop the pagination claims the signature couldn't express. - §9.3 (⑦): built-in/stored tool-name collision becomes a cluster validate/boot error (fold built-in names into the registry uniqueness check), not a silent skip — per the invariants deny-list. - §9.2 (⑥): stored_query_mode folded into the one per-graph mcp: block (Phase 6), not a floating key; not configurable until that surface exists. - §10/§1 (⑧): scope derives from the per-graph mount; server-scoped `health` becomes graph-scoped `graph_health` (server liveness stays REST /healthz). - §13 (⑤, doc-only): OpenAI row corrected to the `authorization` field; Phase-1 reachability via static bearer is unchanged. §17 records the locked decisions; the validation header notes the review pass.
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selected per graph by a `stored_query_mode` setting (default `auto`).
**Where the setting lives (by-design, ⑥).** There is no free-floating `mcp.*` key.
`stored_query_mode` and its threshold belong to the **same per-graph `mcp:` metadata
block** that will hold `expose`/`tool_name` (the cluster Phase-6 surface, §D5 bridge —
see [§17](#17-decisions--rollout)) — one mcp-config home, one validator, validated at
`cluster validate`/boot with the rest of the registry. That sequences it correctly: the
knob cannot land before the surface that holds it exists, and it can't drift into a
second config location. Until Phase 6, the mode is **not configurable** — every graph
runs `auto` (the count-based default below), which is the safe, documented behavior.
The modes themselves:
Stored-query registry foundation + config/CLI RFC-002 (#128) * MR-969: add stored-query registry config surface Introduce the `queries:` block in omnigraph.yaml — an inline `name -> entry` map of stored queries, per-graph (`graphs.<id>.queries`) and top-level for single-graph mode, mirroring how `policy` is wired in both modes. Each entry points at a `.gq` file and carries optional MCP exposure settings (`expose`, `tool_name`), defaulting to not-exposed. Additive: absent `queries:` leaves current behavior unchanged. - QueryEntry { file, mcp: McpSettings { expose, tool_name } } - `queries` field on TargetConfig + OmnigraphConfig (serde default) - query_entries() / target_query_entries() accessors - resolve_query_file() — base_dir-relative `.gq` path resolution - round-trip + absent-block tests Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add stored-query registry loader and GraphHandle wiring Add a `queries` module: QueryRegistry loads each declared `.gq` entry, parses it, and selects the query whose symbol matches the manifest key, asserting the two agree (key == `query <name>` symbol). Identity is the query name; a key/symbol mismatch is a load-time error. Errors are collected, not fail-fast, so a bad registry surfaces every broken entry at once. Schema type-checking is deliberately left to a separate pass so the loader stays callable without an open engine. Thread an `Option<Arc<QueryRegistry>>` through GraphHandle alongside the per-graph policy; the URI-canonicalizing clone propagates it. Production openers default to None for now — the boot path loads and attaches the registry in a later change. - QueryRegistry::{from_specs, load, lookup, iter}; StoredQuery::is_mutation - GraphHandle.queries field, propagated on canonical clone - registry unit tests: identity match/mismatch, multi-query selection, per-entry parse errors, error collection, mutation classification Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: add RFC-002 config & CLI architecture Layered config (user-global ~/.config/omnigraph/ + per-project), a unifying `target` abstraction resolving to (locus, graph, sub-state, credential) with embedded-URI XOR remote-server loci, multi-server × multi-graph client targeting, credentials by-reference, and the file-naming decision: project and server config are one artifact (`omnigraph.yaml`); the only differently-named file is the user-global `config.yaml`, split by scope not role. Includes the 12-factor bind portability rule (prefer --bind/OMNIGRAPH_BIND over a committed server.bind) and the defined-locally / invoked-remotely model for stored queries. Derived from first principles working backwards from what the engine enables; validated against kube/Helix/git/compose. Linked from docs/dev/index.md. Proposed; phased rollout for the MR-973/974/981 family. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add check() to validate stored queries against the live schema A pure check(registry, catalog) that type-checks every stored query via the same typecheck_query_decl the engine runs for inline queries — no parallel implementation. Failures are collected, not fail-fast, so an operator sees every broken query (e.g. a type/property a migration renamed or removed) in one pass. Breakages are fatal (the boot path will refuse to start); warnings are advisory. Pure over (registry, catalog) so it is callable both at boot (engine catalog) and offline from the CLI without an open engine. Advisory lint: an mcp.expose:true query that declares a Vector(N) parameter warns — an LLM cannot supply a raw embedding vector; such a query should take a String parameter and embed server-side. Warns rather than rejects, since service-to-service callers may pass vectors. - CheckReport { breakages, warnings }; has_breakages / is_clean - tests: valid query, unknown type, unknown property, collect-not-fail-fast, vector-param-exposed warns, unexposed silent Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Drop internal plan-label refs from stored-query config comments Doc comments referenced sequencing labels ("C2") that mean nothing to a reader; reword to describe the behavior directly. Comment-only. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile aliases with the role model in RFC-002 Place the existing client-only `aliases:` block in the client/server role split: aliases are client-role (CLI, embedded, ungated) and may live in both user-global and project config; `queries:` is server-role (deployment manifest only). They overlap as "name -> .gq"; `queries:` is the superset, and the end-state subsumes aliases (definition -> queries, target/branch/format -> client invocation context, positional args -> CLI sugar). v1 keeps aliases unchanged. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: make RFC-002 config global-first, project-optional The global user config is the primary, self-sufficient default; the CLI works from any directory with no project file (the kubectl/aws/gh posture), a deliberate flip from today's project-anchored behavior. The project omnigraph.yaml becomes an optional repo-scoped override and the deployment manifest. Uniform schema, both layers optional; global can hold any section including a personal server's graphs/queries. Additive: project still overrides global; the flip adds a fallback layer below the project file rather than removing it. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: justify XDG ~/.config/omnigraph over legacy ~/.omnigraph in RFC-002 Make the rationale explicit: XDG-first because OmniGraph is a client that will cache remote catalogs and keep session state alongside secrets, and XDG separates config / cache / state into distinct dirs (clear cache without touching creds; backups skip cache) whereas a single ~/.omnigraph/ mixes them. Honor ~/.omnigraph/ as a fallback for the peer-group (aws/kube/docker/helix) expectation. Add XDG_CACHE_HOME / XDG_STATE_HOME to the override precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: build RFC-002 credentials on the existing env-file mechanism OmniGraph already has credentials-by-reference: bearer_token_env names the env var, and auth.env_file is a git-ignored dotenv the CLI auto-loads (real env vars win), resolved via resolve_remote_bearer_token. The RFC's proposed credentials.yaml + token_env were redundant parallel inventions. Reconcile: reuse bearer_token_env (extend to servers.<name>) and auth.env_file (add a global ~/.config/omnigraph/.env layered under the project .env.omni); OS keychain is an additive future resolver. No new credentials.yaml. Updated summary, non-goals, background, file-naming, credentials, example, login, migration, rollout. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: use single ~/.omnigraph dir (Helix-style), not XDG, in RFC-002 Reverse the earlier XDG-first call. The prior argument rested on a false dichotomy (single-dir => mixed config/cache/state); in fact the peer tools (aws, kube, helix) achieve separation via SUBDIRECTORIES inside one ~/.tool/ dir (~/.aws/sso/cache/, ~/.kube/cache/), getting cache hygiene AND one discoverable place. So everything goes under ~/.omnigraph/: config.yaml, credentials (dotenv, 0600), cache/, state/. Lower cognitive load, matches what DB/cloud-CLI users expect, matches Helix. OMNIGRAPH_HOME overrides; $XDG_CONFIG_HOME optionally honored but ~/.omnigraph/ is canonical. Updated all paths, the rationale paragraph, the file-naming table (added a cache/state row), and env precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile RFC-002 with shipped/planned CLI tickets Align with reality found in existing tickets: - Noun is graph/graphs, not target/targets (MR-603 done renamed the config key targets->graphs, flag --graph). Use graphs:/--graph; an entry is embedded (uri) XOR remote (server + remote graph name). - ~/.omnigraph/ confirmed by MR-581 (og template pull, done) which already quick-starts templates there. - Templates already exist (MR-581/MR-531) — not invented here. - The init family is already specced (init, quickstart MR-973, serve MR-970, prune MR-972, mcp install MR-974, agent-mode MR-981); this RFC only adds the user route (~/.omnigraph/config.yaml + login). - aliases: -> operations: planned (MR-839). - bearer_token_env gap tracked in MR-971. - query lint/check already exist (MR-639) — registry validator must not collide with the singular `query check`. Add a Reconciliation section; fix the canonical example to graphs:/--graph. Also: merge semantics refined (deep-merge settings, replace named entries, replace lists, config view --resolved --show-origin). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: correct stale-ticket claims and fold init/bootstrap design into RFC-002 Verify against code, not ticket statuses (MR-581 is marked done but is stale/unbuilt): no ~/.omnigraph usage, no template/serve/quickstart/ prune/login commands exist; config still uses aliases: (no operations:). So ~/.omnigraph/ stands on peer-convention merits alone, and templates are a design question, not a foothold. Add §7.5: the three-tier init model (user route = login + ~/.omnigraph/config.yaml; thin project init; fat quickstart + templates) with first-principles positions (split init/login, in-place refuse-if-exists, interactive vs --auto/agent-mode, --template flag, secrets-on-scaffold gitignore rule). This RFC owns only the user route; the rest are sibling tickets (MR-973/970/972/974/981). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: breadboard + slice Shape A in RFC-002 Add the implementation breadboard (places P1-P5, affordances N1-N14 with NEW markers, mermaid) and five vertical slices for the selected config/ CLI/init shape: V1 global layer + merge engine + config view; V2 remote graphs + HTTP-client path + credential resolution; V3 omnigraph login; V4 init-hardening + quickstart + templates (rides MR-970); V5 agent-mode (MR-981). Rollout reordered to the slice sequence; spikes X1-X4 gate their owning slice. V1-V2 close the substantive client->server gap. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add InvokeQuery Cedar action (coarse, graph-scoped) A per-graph, branch-scoped action that gates invoking a server-side stored query by name. Coarse for now: an `invoke_query` allow rule permits any stored query on the graph; a future, additive refinement adds an optional per-query-name scope without changing rules written against the coarse action. Enforcement is at the HTTP boundary; the engine `_as` writers still enforce read/change per the query body, so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). No call site yet — the invocation handler wires it in a later change (same pattern as Admin/GraphList added ahead of consumers). - variant + as_str/resource_kind(Graph)/FromStr/uses_branch_scope - Cedar schema: invoke_query appliesTo Graph - tests: per-graph allow/deny, branch-scope accepted Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Load and type-check stored queries at server boot, refusing breakage At startup the server now loads each graph's stored-query registry, type-checks every query against that graph's live schema, and refuses to boot if any query references a type/property the schema doesn't have (same posture as bad policy YAML) — so schema drift surfaces at the deploy boundary, not silently at invocation. Non-blocking warnings are logged. The validated registry is attached to the GraphHandle (the two production sites previously held `queries: None`). Loading (parse + key==symbol identity) happens at settings-build time where the config is in scope; the schema type-check happens after each engine opens (single mode in `open_single_with_queries`, multi mode in `open_single_graph`). `open_with_bearer_tokens_and_policy` delegates with an empty registry so its 18 test callers are unchanged; the public `new_*` constructors are unchanged (only the private build path threads the registry). - ServerConfigMode::Single / GraphStartupConfig carry the loaded registry - boot tests: valid registry boots; type-broken query refuses boot + names it Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add `omnigraph queries validate` and `queries list` CLI `queries validate` type-checks the stored-query registry against the live schema offline — it opens the selected graph, runs the same check() the server runs at boot, prints breakages/warnings (human or --json), and exits non-zero on any breakage — so an operator can catch a query broken by a schema change without restarting the server. `queries list` prints each registered query's name, MCP exposure, and typed params. Named `validate` (not `check`) to avoid overlap with the existing `omnigraph lint` — `query check`/`query lint` are already deprecated argv-shims to `lint`. Registry entries resolve like the server: a named graph uses its per-graph `queries:`; otherwise the top-level one. - Queries subcommand group; reuses QueryRegistry::load + check from omnigraph-server; local-only (needs the schema), mirrors lint - tests: clean registry exits 0, broken query exits non-zero + names it, list shows the query and its typed params Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Route registry selection through one shared query_entries_for The "which queries: block applies for graph X" rule existed twice — the server boot path and the CLI's registry_entries — and had already drifted: the CLI carried an unreachable unwrap_or_else fallback the server lacked. Add OmnigraphConfig::query_entries_for(graph: Option<&str>) as the single definition (named graph -> its per-graph block; otherwise top-level) and route all three sites through it: server single mode, server multi-graph loop, and the CLI. The CLI's dead fallback arm is deleted; CLI and server now resolve identically by construction. No behavior change. Extends the config round-trip test to pin the selector, including the unknown-name -> top-level fallback the deleted CLI arm covered. * Funnel registry validation through one validate_and_attach gate The check -> refuse-on-breakage -> log-warnings -> empty->None block was copy-pasted across both open paths (single mode and the multi-graph per-graph open), differing only by the graph label. A third opener could attach a registry that was never schema-checked. Extract validate_and_attach(queries, catalog, label) -> Option<Arc<..>> as the single gate both paths call, so attaching an unchecked registry is no longer expressible. The catalog handle is an owned Arc, so calling it before the multi-mode policy match (which rebinds db) is borrow-clean. No behavior change. Adds a direct unit test of the helper (empty / clean / breakage incl. the graph label in the message) — covering the multi-graph path's logic, which previously had no boot-refusal coverage. * Resolve param types structurally in the MCP vector lint The exposed-query advisory detected vector params with type_name.starts_with("Vector(") — a second copy of the compiler's own ScalarType::from_str_name vector parsing that could drift from it. Key the lint off PropType::from_param_type_name + ScalarType::Vector(_) instead, the one canonical resolver the type system already uses. Any future param-suppliability lint now reads the structured type rather than scanning the surface string. Behavior-preserving: the grammar forbids list-of-vector params (list_type = "[" base_type "]", and base_type excludes Vector), so the only input where the structured and string checks could differ is unparseable. Adds a guard test that an exposed String param does not false-trigger the warning. * Refuse duplicate MCP tool names across exposed stored queries The effective MCP tool name (explicit tool_name, else the query name) is a second identity namespace beside the registry key, but nothing enforced it unique — two exposed queries could claim one catalog key, and each consumer re-derived the name ad hoc. Add StoredQuery::effective_tool_name() as the one definition, and a load-time uniqueness pass in from_specs over exposed queries: a collision is a collected LoadError naming the loser and the winner. Scoped to exposed queries (unexposed have no MCP tool); deterministic over the BTreeMap so the first-declared wins and the error order is stable. New (rare) refusal: a config with colliding exposed tool names now fails `omnigraph queries validate` offline and refuses server boot, the same posture as a malformed registry. Release-note-worthy. Test-first: duplicate_exposed_tool_name_is_a_load_error (red before the pass, green after) + a CLI offline test; the unexposed sibling pins the exposed-only scope; effective_tool_name asserts folded into the load test. * docs: document the queries registry, CLI, and invoke_query action The stored-query surface shipped without user docs. Add it, per the same-PR maintenance contract: - policy.md: invoke_query as per-graph action #10 (branch-scoped), with the double-gating note; renumber graph_list; add it to the branch_scope list. - cli-reference.md: the `queries validate | list` command, and the `queries:` config block (per-graph + top-level) with mcp.expose/tool_name and the tool-name uniqueness rule. - server.md: boot-time stored-query type-check (refuse on breakage), noting invocation over HTTP/MCP is not yet exposed. * Add POST /queries/{name} stored-query invocation handler Invoke a curated server-side stored query by name: source + name come from the per-graph queries: registry, the client sends only runtime inputs (params, branch, snapshot). Gated by the invoke_query Cedar action at the boundary; the handler delegates to the existing run_query/run_mutate, whose inner Read/Change enforce still runs — so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). - InvokeStoredQueryRequest + an untagged InvokeStoredQueryResponse { Read(ReadOutput), Change(ChangeOutput) } → one Json<_> return type and a oneOf 200 schema (a correct contract, not a wrong-but-simple one). - Route lives in per_graph_protected → single-mode /queries/{name} and multi-mode /graphs/{id}/queries/{name} for free. - Deny == unknown: an invoke_query denial and a missing query both return the same 404, so the catalog can't be probed by an unauthorized caller. - OpenAPI regenerated; tests cover read, mutation double-gate (403 vs 200), bad-param 400, and the identical-404 deny path. Completes the MR-969 V1 invocation slice (registry + /queries/{name} + invoke_query). * docs: stored-query invocation endpoint; flip the not-yet-exposed caveat Now that POST /queries/{name} ships (C7), document it: add the endpoint to server.md's inventory + an invocation section (body, untagged read/mutate envelope, invoke_query gate, double-gated mutations, deny == 404), and flip the startup note that said invocation was not yet exposed. In policy.md, replace "no invocation call site yet" on the invoke_query action with a pointer to the endpoint. * Scope the stored-query 404-hiding claim to non-invoke_query callers Review found the deny==404 catalog-hiding was overstated as a contract: it holds only at the outer invoke_query gate. A caller that HOLDS invoke_query but lacks read/change gets the inner gate's 403 for an existing query vs 404 for an unknown one — so existence is visible to grant-holders by design (the intended double-gate). The handler docstring, OpenAPI 404 description, and server.md all claimed the 404 was airtight against any denied actor. Correct the wording in all three (no behavior change) and add the missing symmetric test (invoke_query but no read -> 403 for an existing query, 404 for unknown) so the actual contract is pinned. Also document that in default-deny mode (tokens, no policy) every invocation 404s until an invoke_query rule is configured. Nits: the from_specs collision comment said "first declared wins" but it is lexicographically-first by name (BTreeMap); the effective_tool_name docstring overclaimed the CLI display routes through it (it resolves the rule on its own output DTO). * Default mcp.expose to true (the manifest entry is the opt-in) expose controls MCP-catalog membership only — it is not an authorization gate (invocation is gated by invoke_query regardless). So requiring a per-query mcp.expose: true was friction with no safety benefit: a non-exposed query is still HTTP-invocable by name. Flip the default so declaring a query in the manifest exposes it to the agent tool catalog by default; expose: false is the escape hatch for service-only queries. Both the absent-mcp path (Default impl) and the present-but-no-expose path (serde default fn) now yield true. Doc comments + cli-reference updated; the config round-trip test asserts the new default. * Add GET /queries stored-query catalog endpoint List a graph's mcp.expose stored queries as a typed tool catalog so a client (the MCP server) can register them as tools without fetching .gq source. Each entry carries name, MCP tool_name, description/instruction, a read/mutate flag, and decomposed typed params (kind enum: string|bool|int| bigint|float|date|datetime|blob|vector|list, plus item_kind for lists and vector_dim) — so the consumer builds an input schema with a closed match and never re-parses omnigraph type spelling. I64/U64 are bigint (string on the wire): a JSON number loses precision past 2^53 and the engine already accepts decimal strings. Read-gated (works in default-deny; the catalog is graph-wide, authorized against main). NOT Cedar-filtered per query yet — a reader can list a query whose invoke_query they lack (documented gap until per-query authz lands); invocation stays invoke_query-gated + deny==404. - api: QueriesCatalogOutput / QueryCatalogEntry / ParamDescriptor / ParamKind + query_catalog_entry (reuses PropType::from_param_type_name; scalar_kind is exhaustive, so a new ScalarType is a compile error here until catalogued). - GET /queries route in per_graph_protected (→ /graphs/{id}/queries in multi mode); OpenAPI regenerated; path allowlists updated. - Tests: projection unit (every kind, list, vector, nullable, mutation, empty) + handler (exposed-only filter, read-gate probe-oracle, empty registry). * docs: GET /queries stored-query catalog endpoint Document the catalog: the endpoint table row (GET /queries, read-gated), a catalog section (typed-param kind enum, bigint/date/datetime/blob-as-string, graph-wide/branch-independent, mcp.expose default true, the read-gated probe-oracle gap), and flip the startup note now that the catalog ships. * Collect file-I/O and parse errors in QueryRegistry::load in one pass load() early-returned on any unreadable .gq file, masking parse / identity / tool-name-collision errors in the OTHER (readable) files — so an operator fixed the missing file, restarted, and only then saw the next broken query. Now it collects I/O errors but still runs from_specs on the readable specs and returns the union, so every broken entry surfaces at once (matching the collected-errors contract the rest of the registry already follows). Safe: from_specs' tool-name collision check runs over loaded queries only, so dropping an I/O-failed entry can only under-report a collision, never invent one. I/O errors are ordered first (BTreeMap key order), then spec errors. Adds a load-level test (tempdir: a valid, a missing, and a parse-broken .gq) asserting all three surface in one Err — confirmed red before the fix. * Make invoke_query graph-scoped (one branch authority) invoke_query gates reaching the curated stored-query surface — a graph-level capability. Per-branch/snapshot access is already enforced by the inner read/change gate in run_query/run_mutate (authorized against the resolved branch), so branch-scoping the outer gate was redundant AND wrong for snapshot reads (it defaulted to main). Drop the branch dimension: remove InvokeQuery from uses_branch_scope (it joins admin as graph-scoped) and authorize the boundary gate with branch: None. Lossless: an actor confined to branch X by their read/change rules can still only invoke a stored query that touches X. A rule that sets branch_scope on invoke_query is now rejected by validate() — write invoke_query in its own rule. Ripple (atomic): restructure the server invoke fixture so invoke_query sits in its own branch_scope-free rule; invert invoke_query_is_branch_scoped -> invoke_query_rejects_branch_scope; the per-graph authorize test uses branch: None; docs (policy.md, server.md, the InvokeQuery doc). No wire/OpenAPI change. * Resolve graph config by identity, not server mode Which policy/queries block applies for a graph was decided three different, mode-dependent ways: single-mode boot used top-level even for a named graph; multi-mode used per-graph (and silently ignored a top-level queries block); the CLI used per-graph for a named target. So `queries validate --target prod` could check a different registry than the single-mode server loaded, and a named graph's per-graph policy/queries were silently shadowed. Make config a function of graph IDENTITY: a graph served by NAME (--target/server.graph, a graphs: entry) uses its own graphs.<name>.{policy, queries}; a bare URI is anonymous and uses top-level. One rule, applied by single-mode boot, multi-mode boot, and the CLI — so they can't diverge and the CLI predicts the server exactly. No silent ignore: serving a named graph while a top-level policy/queries block is populated now refuses boot, naming the block (the multi-mode top-level-policy bail, extended to queries and to single-mode-named). The CLI's `queries validate` derives the schema URI and the registry from ONE selection, and a positional URI forces anonymous (ignoring cli.graph) so the two can't come from different graphs. BREAKING (released behavior): single mode by name (--target/server.graph) with top-level policy/queries previously used top-level; it now uses the per-graph block and refuses boot if top-level is also populated. Bare-URI single mode is unchanged. Loud, with migration text pointing at graphs.<name>. - config: resolve_policy_file_for (policy sibling of query_entries_for, no top-level fallback) + populated_top_level_blocks for the coherence check. - characterization tests (single-mode named -> per-graph; named + top-level -> bail; multi-mode top-level queries -> bail; CLI positional-URI -> top-level). - docs: policy.md, server.md, cli-reference.md. * docs: RFC-002 credentials keyed by server name (keychain/profile/env) Reworks the RFC's credentials model: secrets are keyed by server name — OS keychain `omnigraph:<server>` (preferred) -> a `[<server>]` profile in `~/.omnigraph/credentials` -> `OMNIGRAPH_TOKEN[_<SERVER>]` env (CI), the AWS/gh/kube model. `servers.<name>` is endpoint-only by default but may carry an explicit, secret-free `auth: { token: { env|file|command|keychain } }` source. The shipped `bearer_token_env` + `.env.omni` dotenv remain a legacy compat path; no `credentials.yaml`. * docs: RFC-002 — typed graph locator (storage/server/graph_id), not a uri string Add §1.1: the resolved graph address is a typed GraphLocator (Embedded{storage} | Remote{server, graph_id}), not a flat uri: String. Diagnoses the string model's cost in the code today (~16 is_remote_uri forks, TargetConfig can't express multi-server x multi-graph, the CLI bails on remote, the ts SDK models baseUrl+graphId separately) and settles the YAML naming so the key names the locus: - storage: (embedded) — shipped uri: is a deprecated alias - server: + graph_id: (remote) — graph_id defaults to the entry key - storage xor server, reject both/neither (no silent ambiguity) Kills the graphs:/graph: collision and the uri:-might-be-a-server ambiguity. Updates the §1/§8 examples and the entry-shape notes to the new naming. * Test: queries list must reject an unknown --target queries list opens no graph URI, so unknown-graph validation does not ride along on resolve_target_uri the way it does for every other command. The new test reproduces the gap: with an unknown --target the command currently exits 0 and prints the (empty) top-level registry instead of erroring like the URI-resolving commands do. Fails against current code; the fix follows. * Validate the graph selection in queries list Graph-existence validation was a side effect of URI resolution: every URI-resolving command rejects an unknown --target via resolve_target_uri, but queries list opens no URI, so query_entries_for(Some(unknown)) silently fell back to the top-level registry and showed the wrong (or empty) catalog. Make membership a property of the selection: add the fallible resolve_graph_selection alongside the infallible query_entries_for (a known name passes through, an unknown name errors with the same message as resolve_target_uri, None stays anonymous), and validate the selection in execute_queries_list. query_entries_for is unchanged — server boot's bare-URI path still needs its None -> top-level arm. * Surface policy-engine errors from stored-query invoke The invoke handler mapped every authorize_request failure to 404 ('stored query not found'), which collapsed the authorization decision (deny -> 403) together with operational failures (no actor -> 401, Cedar evaluation error -> 500). A real policy-engine 500 was hidden as a missing query. Separate the two concerns instead of sniffing the masked status. Extract authorize() returning an Authz { Allowed, Denied(msg) } decision and reserve Err for operational failures only; authorize_request becomes a thin wrapper that maps Denied -> 403, so the 16 deny-as-403 callers are unchanged. The invoke handler now matches the decision directly: a denial stays 404 (deny == missing, so the catalog can't be probed without the grant), while a 401/500 propagates with its true status. 500 is now a reachable outcome on POST /queries/{name}; document it in the endpoint responses and regenerate openapi.json. * Extract the named-graph/top-level coherence rule into one helper The rule 'a named graph uses its own graphs.<name> block, so a populated top-level block is a config error' lived inline in single-mode server boot. Extract it to OmnigraphConfig::ensure_top_level_blocks_honored so the same definition can be shared by the CLI selection gate (next commit) and the two can't drift. Boot calls the helper; the message is reworded context-neutral (drops 'serving') so it reads correctly from both boot and the CLI. Behavior-preserving: multi-graph mode keeps its own unconditional check, and single_mode_named_graph_rejects_top_level_blocks still passes. * Test: queries validate/list must reject a named graph with a top-level block Server boot refuses a config where a graph is selected by name yet a top-level queries:/policy.file block is populated (the block would be silently ignored). The CLI's queries validate/list resolve the same named selection but skip that coherence check, so they give a false green / list the per-graph block. The new test reproduces it: validate prints OK and list succeeds where boot would refuse. Fails against current code; the fix follows. * Enforce top-level coherence in the single CLI selection gate queries validate validated graph membership only as a side effect of URI resolution and queries list only via resolve_graph_selection's membership check; neither applied the named-graph/top-level coherence rule server boot enforces, so both gave a false green on a config boot refuses. Fold ensure_top_level_blocks_honored into resolve_graph_selection so it is the single gate that returns only valid + server-coherent selections, and route resolve_selected_graph (queries validate) through it; queries list already calls the gate. A named graph with a populated top-level block now errors in both commands, matching boot. A positional URI stays anonymous (top-level honored), so queries_validate_positional_uri_ignores_default_graph is unaffected. * docs: RFC-003 — MCP server surface for omnigraph-server Detailed MCP-transport design for the stored-query/MCP work, building on the shipped #128 registry. Corrects the draft against the branch head: the coarse invoke_query gate + 404 denial-masking are already wired (server_invoke_query), so per-query invoke_query scope (PolicyRequest has no query-name dimension yet) is the real prerequisite; positions the doc as superseding rfc-001's MCP transport (/mcp/tools+/mcp/invoke) and reconciles the shipped mcp.expose YAML form and the schema-introspection non-goal; grounds the parity surface in the actual omnigraph-ts package (13 tools with read/change ids, 2 resources). * docs(config): clarify graph config boundaries * fix(config): enforce graph-scoped policies and query validation * fix(cli): require graph selection for scoped query registries * fix(server): preserve named graph id in single mode policy * fix(cli): share graph identity for policy resolution * test(cli): cover policy tooling server graph selection * fix(cli): honor server graph for policy tooling --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-01 22:50:31 +02:00
- **`per_query` (small/stable catalogs).** One tool per `expose: true` query, named by
`effective_tool_name()`, with a fully typed `input_schema`. This is the richest
surface — each query is a first-class typed tool, ideal for code-mode runtimes that
compile tools into a typed API.
- **`meta` (large/dynamic catalogs).** Two tools instead of N: `stored_query_list(filter?,
detail_level?)` (returns names + descriptions; full param schema only at higher
detail) and `stored_query_run(name, params, branch?, snapshot?)`. This keeps
`tools/list` small and mirrors the progressive-disclosure shape (`search` + `execute`)
that scales to hundreds of queries.
- **`auto`** picks `per_query` below a threshold (default 24 exposed queries) and `meta`
at or above it; the threshold is configurable. The boundary and count are logged so
a deployment never silently flips modes.
### 9.3 Envelope (collision-free by construction)
In `per_query` mode the tool's `input_schema` **nests query params under `params`**,
mirroring `POST /queries/{name}`:
Stored-query registry foundation + config/CLI RFC-002 (#128) * MR-969: add stored-query registry config surface Introduce the `queries:` block in omnigraph.yaml — an inline `name -> entry` map of stored queries, per-graph (`graphs.<id>.queries`) and top-level for single-graph mode, mirroring how `policy` is wired in both modes. Each entry points at a `.gq` file and carries optional MCP exposure settings (`expose`, `tool_name`), defaulting to not-exposed. Additive: absent `queries:` leaves current behavior unchanged. - QueryEntry { file, mcp: McpSettings { expose, tool_name } } - `queries` field on TargetConfig + OmnigraphConfig (serde default) - query_entries() / target_query_entries() accessors - resolve_query_file() — base_dir-relative `.gq` path resolution - round-trip + absent-block tests Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add stored-query registry loader and GraphHandle wiring Add a `queries` module: QueryRegistry loads each declared `.gq` entry, parses it, and selects the query whose symbol matches the manifest key, asserting the two agree (key == `query <name>` symbol). Identity is the query name; a key/symbol mismatch is a load-time error. Errors are collected, not fail-fast, so a bad registry surfaces every broken entry at once. Schema type-checking is deliberately left to a separate pass so the loader stays callable without an open engine. Thread an `Option<Arc<QueryRegistry>>` through GraphHandle alongside the per-graph policy; the URI-canonicalizing clone propagates it. Production openers default to None for now — the boot path loads and attaches the registry in a later change. - QueryRegistry::{from_specs, load, lookup, iter}; StoredQuery::is_mutation - GraphHandle.queries field, propagated on canonical clone - registry unit tests: identity match/mismatch, multi-query selection, per-entry parse errors, error collection, mutation classification Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: add RFC-002 config & CLI architecture Layered config (user-global ~/.config/omnigraph/ + per-project), a unifying `target` abstraction resolving to (locus, graph, sub-state, credential) with embedded-URI XOR remote-server loci, multi-server × multi-graph client targeting, credentials by-reference, and the file-naming decision: project and server config are one artifact (`omnigraph.yaml`); the only differently-named file is the user-global `config.yaml`, split by scope not role. Includes the 12-factor bind portability rule (prefer --bind/OMNIGRAPH_BIND over a committed server.bind) and the defined-locally / invoked-remotely model for stored queries. Derived from first principles working backwards from what the engine enables; validated against kube/Helix/git/compose. Linked from docs/dev/index.md. Proposed; phased rollout for the MR-973/974/981 family. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add check() to validate stored queries against the live schema A pure check(registry, catalog) that type-checks every stored query via the same typecheck_query_decl the engine runs for inline queries — no parallel implementation. Failures are collected, not fail-fast, so an operator sees every broken query (e.g. a type/property a migration renamed or removed) in one pass. Breakages are fatal (the boot path will refuse to start); warnings are advisory. Pure over (registry, catalog) so it is callable both at boot (engine catalog) and offline from the CLI without an open engine. Advisory lint: an mcp.expose:true query that declares a Vector(N) parameter warns — an LLM cannot supply a raw embedding vector; such a query should take a String parameter and embed server-side. Warns rather than rejects, since service-to-service callers may pass vectors. - CheckReport { breakages, warnings }; has_breakages / is_clean - tests: valid query, unknown type, unknown property, collect-not-fail-fast, vector-param-exposed warns, unexposed silent Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Drop internal plan-label refs from stored-query config comments Doc comments referenced sequencing labels ("C2") that mean nothing to a reader; reword to describe the behavior directly. Comment-only. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile aliases with the role model in RFC-002 Place the existing client-only `aliases:` block in the client/server role split: aliases are client-role (CLI, embedded, ungated) and may live in both user-global and project config; `queries:` is server-role (deployment manifest only). They overlap as "name -> .gq"; `queries:` is the superset, and the end-state subsumes aliases (definition -> queries, target/branch/format -> client invocation context, positional args -> CLI sugar). v1 keeps aliases unchanged. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: make RFC-002 config global-first, project-optional The global user config is the primary, self-sufficient default; the CLI works from any directory with no project file (the kubectl/aws/gh posture), a deliberate flip from today's project-anchored behavior. The project omnigraph.yaml becomes an optional repo-scoped override and the deployment manifest. Uniform schema, both layers optional; global can hold any section including a personal server's graphs/queries. Additive: project still overrides global; the flip adds a fallback layer below the project file rather than removing it. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: justify XDG ~/.config/omnigraph over legacy ~/.omnigraph in RFC-002 Make the rationale explicit: XDG-first because OmniGraph is a client that will cache remote catalogs and keep session state alongside secrets, and XDG separates config / cache / state into distinct dirs (clear cache without touching creds; backups skip cache) whereas a single ~/.omnigraph/ mixes them. Honor ~/.omnigraph/ as a fallback for the peer-group (aws/kube/docker/helix) expectation. Add XDG_CACHE_HOME / XDG_STATE_HOME to the override precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: build RFC-002 credentials on the existing env-file mechanism OmniGraph already has credentials-by-reference: bearer_token_env names the env var, and auth.env_file is a git-ignored dotenv the CLI auto-loads (real env vars win), resolved via resolve_remote_bearer_token. The RFC's proposed credentials.yaml + token_env were redundant parallel inventions. Reconcile: reuse bearer_token_env (extend to servers.<name>) and auth.env_file (add a global ~/.config/omnigraph/.env layered under the project .env.omni); OS keychain is an additive future resolver. No new credentials.yaml. Updated summary, non-goals, background, file-naming, credentials, example, login, migration, rollout. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: use single ~/.omnigraph dir (Helix-style), not XDG, in RFC-002 Reverse the earlier XDG-first call. The prior argument rested on a false dichotomy (single-dir => mixed config/cache/state); in fact the peer tools (aws, kube, helix) achieve separation via SUBDIRECTORIES inside one ~/.tool/ dir (~/.aws/sso/cache/, ~/.kube/cache/), getting cache hygiene AND one discoverable place. So everything goes under ~/.omnigraph/: config.yaml, credentials (dotenv, 0600), cache/, state/. Lower cognitive load, matches what DB/cloud-CLI users expect, matches Helix. OMNIGRAPH_HOME overrides; $XDG_CONFIG_HOME optionally honored but ~/.omnigraph/ is canonical. Updated all paths, the rationale paragraph, the file-naming table (added a cache/state row), and env precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile RFC-002 with shipped/planned CLI tickets Align with reality found in existing tickets: - Noun is graph/graphs, not target/targets (MR-603 done renamed the config key targets->graphs, flag --graph). Use graphs:/--graph; an entry is embedded (uri) XOR remote (server + remote graph name). - ~/.omnigraph/ confirmed by MR-581 (og template pull, done) which already quick-starts templates there. - Templates already exist (MR-581/MR-531) — not invented here. - The init family is already specced (init, quickstart MR-973, serve MR-970, prune MR-972, mcp install MR-974, agent-mode MR-981); this RFC only adds the user route (~/.omnigraph/config.yaml + login). - aliases: -> operations: planned (MR-839). - bearer_token_env gap tracked in MR-971. - query lint/check already exist (MR-639) — registry validator must not collide with the singular `query check`. Add a Reconciliation section; fix the canonical example to graphs:/--graph. Also: merge semantics refined (deep-merge settings, replace named entries, replace lists, config view --resolved --show-origin). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: correct stale-ticket claims and fold init/bootstrap design into RFC-002 Verify against code, not ticket statuses (MR-581 is marked done but is stale/unbuilt): no ~/.omnigraph usage, no template/serve/quickstart/ prune/login commands exist; config still uses aliases: (no operations:). So ~/.omnigraph/ stands on peer-convention merits alone, and templates are a design question, not a foothold. Add §7.5: the three-tier init model (user route = login + ~/.omnigraph/config.yaml; thin project init; fat quickstart + templates) with first-principles positions (split init/login, in-place refuse-if-exists, interactive vs --auto/agent-mode, --template flag, secrets-on-scaffold gitignore rule). This RFC owns only the user route; the rest are sibling tickets (MR-973/970/972/974/981). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: breadboard + slice Shape A in RFC-002 Add the implementation breadboard (places P1-P5, affordances N1-N14 with NEW markers, mermaid) and five vertical slices for the selected config/ CLI/init shape: V1 global layer + merge engine + config view; V2 remote graphs + HTTP-client path + credential resolution; V3 omnigraph login; V4 init-hardening + quickstart + templates (rides MR-970); V5 agent-mode (MR-981). Rollout reordered to the slice sequence; spikes X1-X4 gate their owning slice. V1-V2 close the substantive client->server gap. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add InvokeQuery Cedar action (coarse, graph-scoped) A per-graph, branch-scoped action that gates invoking a server-side stored query by name. Coarse for now: an `invoke_query` allow rule permits any stored query on the graph; a future, additive refinement adds an optional per-query-name scope without changing rules written against the coarse action. Enforcement is at the HTTP boundary; the engine `_as` writers still enforce read/change per the query body, so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). No call site yet — the invocation handler wires it in a later change (same pattern as Admin/GraphList added ahead of consumers). - variant + as_str/resource_kind(Graph)/FromStr/uses_branch_scope - Cedar schema: invoke_query appliesTo Graph - tests: per-graph allow/deny, branch-scope accepted Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Load and type-check stored queries at server boot, refusing breakage At startup the server now loads each graph's stored-query registry, type-checks every query against that graph's live schema, and refuses to boot if any query references a type/property the schema doesn't have (same posture as bad policy YAML) — so schema drift surfaces at the deploy boundary, not silently at invocation. Non-blocking warnings are logged. The validated registry is attached to the GraphHandle (the two production sites previously held `queries: None`). Loading (parse + key==symbol identity) happens at settings-build time where the config is in scope; the schema type-check happens after each engine opens (single mode in `open_single_with_queries`, multi mode in `open_single_graph`). `open_with_bearer_tokens_and_policy` delegates with an empty registry so its 18 test callers are unchanged; the public `new_*` constructors are unchanged (only the private build path threads the registry). - ServerConfigMode::Single / GraphStartupConfig carry the loaded registry - boot tests: valid registry boots; type-broken query refuses boot + names it Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add `omnigraph queries validate` and `queries list` CLI `queries validate` type-checks the stored-query registry against the live schema offline — it opens the selected graph, runs the same check() the server runs at boot, prints breakages/warnings (human or --json), and exits non-zero on any breakage — so an operator can catch a query broken by a schema change without restarting the server. `queries list` prints each registered query's name, MCP exposure, and typed params. Named `validate` (not `check`) to avoid overlap with the existing `omnigraph lint` — `query check`/`query lint` are already deprecated argv-shims to `lint`. Registry entries resolve like the server: a named graph uses its per-graph `queries:`; otherwise the top-level one. - Queries subcommand group; reuses QueryRegistry::load + check from omnigraph-server; local-only (needs the schema), mirrors lint - tests: clean registry exits 0, broken query exits non-zero + names it, list shows the query and its typed params Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Route registry selection through one shared query_entries_for The "which queries: block applies for graph X" rule existed twice — the server boot path and the CLI's registry_entries — and had already drifted: the CLI carried an unreachable unwrap_or_else fallback the server lacked. Add OmnigraphConfig::query_entries_for(graph: Option<&str>) as the single definition (named graph -> its per-graph block; otherwise top-level) and route all three sites through it: server single mode, server multi-graph loop, and the CLI. The CLI's dead fallback arm is deleted; CLI and server now resolve identically by construction. No behavior change. Extends the config round-trip test to pin the selector, including the unknown-name -> top-level fallback the deleted CLI arm covered. * Funnel registry validation through one validate_and_attach gate The check -> refuse-on-breakage -> log-warnings -> empty->None block was copy-pasted across both open paths (single mode and the multi-graph per-graph open), differing only by the graph label. A third opener could attach a registry that was never schema-checked. Extract validate_and_attach(queries, catalog, label) -> Option<Arc<..>> as the single gate both paths call, so attaching an unchecked registry is no longer expressible. The catalog handle is an owned Arc, so calling it before the multi-mode policy match (which rebinds db) is borrow-clean. No behavior change. Adds a direct unit test of the helper (empty / clean / breakage incl. the graph label in the message) — covering the multi-graph path's logic, which previously had no boot-refusal coverage. * Resolve param types structurally in the MCP vector lint The exposed-query advisory detected vector params with type_name.starts_with("Vector(") — a second copy of the compiler's own ScalarType::from_str_name vector parsing that could drift from it. Key the lint off PropType::from_param_type_name + ScalarType::Vector(_) instead, the one canonical resolver the type system already uses. Any future param-suppliability lint now reads the structured type rather than scanning the surface string. Behavior-preserving: the grammar forbids list-of-vector params (list_type = "[" base_type "]", and base_type excludes Vector), so the only input where the structured and string checks could differ is unparseable. Adds a guard test that an exposed String param does not false-trigger the warning. * Refuse duplicate MCP tool names across exposed stored queries The effective MCP tool name (explicit tool_name, else the query name) is a second identity namespace beside the registry key, but nothing enforced it unique — two exposed queries could claim one catalog key, and each consumer re-derived the name ad hoc. Add StoredQuery::effective_tool_name() as the one definition, and a load-time uniqueness pass in from_specs over exposed queries: a collision is a collected LoadError naming the loser and the winner. Scoped to exposed queries (unexposed have no MCP tool); deterministic over the BTreeMap so the first-declared wins and the error order is stable. New (rare) refusal: a config with colliding exposed tool names now fails `omnigraph queries validate` offline and refuses server boot, the same posture as a malformed registry. Release-note-worthy. Test-first: duplicate_exposed_tool_name_is_a_load_error (red before the pass, green after) + a CLI offline test; the unexposed sibling pins the exposed-only scope; effective_tool_name asserts folded into the load test. * docs: document the queries registry, CLI, and invoke_query action The stored-query surface shipped without user docs. Add it, per the same-PR maintenance contract: - policy.md: invoke_query as per-graph action #10 (branch-scoped), with the double-gating note; renumber graph_list; add it to the branch_scope list. - cli-reference.md: the `queries validate | list` command, and the `queries:` config block (per-graph + top-level) with mcp.expose/tool_name and the tool-name uniqueness rule. - server.md: boot-time stored-query type-check (refuse on breakage), noting invocation over HTTP/MCP is not yet exposed. * Add POST /queries/{name} stored-query invocation handler Invoke a curated server-side stored query by name: source + name come from the per-graph queries: registry, the client sends only runtime inputs (params, branch, snapshot). Gated by the invoke_query Cedar action at the boundary; the handler delegates to the existing run_query/run_mutate, whose inner Read/Change enforce still runs — so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). - InvokeStoredQueryRequest + an untagged InvokeStoredQueryResponse { Read(ReadOutput), Change(ChangeOutput) } → one Json<_> return type and a oneOf 200 schema (a correct contract, not a wrong-but-simple one). - Route lives in per_graph_protected → single-mode /queries/{name} and multi-mode /graphs/{id}/queries/{name} for free. - Deny == unknown: an invoke_query denial and a missing query both return the same 404, so the catalog can't be probed by an unauthorized caller. - OpenAPI regenerated; tests cover read, mutation double-gate (403 vs 200), bad-param 400, and the identical-404 deny path. Completes the MR-969 V1 invocation slice (registry + /queries/{name} + invoke_query). * docs: stored-query invocation endpoint; flip the not-yet-exposed caveat Now that POST /queries/{name} ships (C7), document it: add the endpoint to server.md's inventory + an invocation section (body, untagged read/mutate envelope, invoke_query gate, double-gated mutations, deny == 404), and flip the startup note that said invocation was not yet exposed. In policy.md, replace "no invocation call site yet" on the invoke_query action with a pointer to the endpoint. * Scope the stored-query 404-hiding claim to non-invoke_query callers Review found the deny==404 catalog-hiding was overstated as a contract: it holds only at the outer invoke_query gate. A caller that HOLDS invoke_query but lacks read/change gets the inner gate's 403 for an existing query vs 404 for an unknown one — so existence is visible to grant-holders by design (the intended double-gate). The handler docstring, OpenAPI 404 description, and server.md all claimed the 404 was airtight against any denied actor. Correct the wording in all three (no behavior change) and add the missing symmetric test (invoke_query but no read -> 403 for an existing query, 404 for unknown) so the actual contract is pinned. Also document that in default-deny mode (tokens, no policy) every invocation 404s until an invoke_query rule is configured. Nits: the from_specs collision comment said "first declared wins" but it is lexicographically-first by name (BTreeMap); the effective_tool_name docstring overclaimed the CLI display routes through it (it resolves the rule on its own output DTO). * Default mcp.expose to true (the manifest entry is the opt-in) expose controls MCP-catalog membership only — it is not an authorization gate (invocation is gated by invoke_query regardless). So requiring a per-query mcp.expose: true was friction with no safety benefit: a non-exposed query is still HTTP-invocable by name. Flip the default so declaring a query in the manifest exposes it to the agent tool catalog by default; expose: false is the escape hatch for service-only queries. Both the absent-mcp path (Default impl) and the present-but-no-expose path (serde default fn) now yield true. Doc comments + cli-reference updated; the config round-trip test asserts the new default. * Add GET /queries stored-query catalog endpoint List a graph's mcp.expose stored queries as a typed tool catalog so a client (the MCP server) can register them as tools without fetching .gq source. Each entry carries name, MCP tool_name, description/instruction, a read/mutate flag, and decomposed typed params (kind enum: string|bool|int| bigint|float|date|datetime|blob|vector|list, plus item_kind for lists and vector_dim) — so the consumer builds an input schema with a closed match and never re-parses omnigraph type spelling. I64/U64 are bigint (string on the wire): a JSON number loses precision past 2^53 and the engine already accepts decimal strings. Read-gated (works in default-deny; the catalog is graph-wide, authorized against main). NOT Cedar-filtered per query yet — a reader can list a query whose invoke_query they lack (documented gap until per-query authz lands); invocation stays invoke_query-gated + deny==404. - api: QueriesCatalogOutput / QueryCatalogEntry / ParamDescriptor / ParamKind + query_catalog_entry (reuses PropType::from_param_type_name; scalar_kind is exhaustive, so a new ScalarType is a compile error here until catalogued). - GET /queries route in per_graph_protected (→ /graphs/{id}/queries in multi mode); OpenAPI regenerated; path allowlists updated. - Tests: projection unit (every kind, list, vector, nullable, mutation, empty) + handler (exposed-only filter, read-gate probe-oracle, empty registry). * docs: GET /queries stored-query catalog endpoint Document the catalog: the endpoint table row (GET /queries, read-gated), a catalog section (typed-param kind enum, bigint/date/datetime/blob-as-string, graph-wide/branch-independent, mcp.expose default true, the read-gated probe-oracle gap), and flip the startup note now that the catalog ships. * Collect file-I/O and parse errors in QueryRegistry::load in one pass load() early-returned on any unreadable .gq file, masking parse / identity / tool-name-collision errors in the OTHER (readable) files — so an operator fixed the missing file, restarted, and only then saw the next broken query. Now it collects I/O errors but still runs from_specs on the readable specs and returns the union, so every broken entry surfaces at once (matching the collected-errors contract the rest of the registry already follows). Safe: from_specs' tool-name collision check runs over loaded queries only, so dropping an I/O-failed entry can only under-report a collision, never invent one. I/O errors are ordered first (BTreeMap key order), then spec errors. Adds a load-level test (tempdir: a valid, a missing, and a parse-broken .gq) asserting all three surface in one Err — confirmed red before the fix. * Make invoke_query graph-scoped (one branch authority) invoke_query gates reaching the curated stored-query surface — a graph-level capability. Per-branch/snapshot access is already enforced by the inner read/change gate in run_query/run_mutate (authorized against the resolved branch), so branch-scoping the outer gate was redundant AND wrong for snapshot reads (it defaulted to main). Drop the branch dimension: remove InvokeQuery from uses_branch_scope (it joins admin as graph-scoped) and authorize the boundary gate with branch: None. Lossless: an actor confined to branch X by their read/change rules can still only invoke a stored query that touches X. A rule that sets branch_scope on invoke_query is now rejected by validate() — write invoke_query in its own rule. Ripple (atomic): restructure the server invoke fixture so invoke_query sits in its own branch_scope-free rule; invert invoke_query_is_branch_scoped -> invoke_query_rejects_branch_scope; the per-graph authorize test uses branch: None; docs (policy.md, server.md, the InvokeQuery doc). No wire/OpenAPI change. * Resolve graph config by identity, not server mode Which policy/queries block applies for a graph was decided three different, mode-dependent ways: single-mode boot used top-level even for a named graph; multi-mode used per-graph (and silently ignored a top-level queries block); the CLI used per-graph for a named target. So `queries validate --target prod` could check a different registry than the single-mode server loaded, and a named graph's per-graph policy/queries were silently shadowed. Make config a function of graph IDENTITY: a graph served by NAME (--target/server.graph, a graphs: entry) uses its own graphs.<name>.{policy, queries}; a bare URI is anonymous and uses top-level. One rule, applied by single-mode boot, multi-mode boot, and the CLI — so they can't diverge and the CLI predicts the server exactly. No silent ignore: serving a named graph while a top-level policy/queries block is populated now refuses boot, naming the block (the multi-mode top-level-policy bail, extended to queries and to single-mode-named). The CLI's `queries validate` derives the schema URI and the registry from ONE selection, and a positional URI forces anonymous (ignoring cli.graph) so the two can't come from different graphs. BREAKING (released behavior): single mode by name (--target/server.graph) with top-level policy/queries previously used top-level; it now uses the per-graph block and refuses boot if top-level is also populated. Bare-URI single mode is unchanged. Loud, with migration text pointing at graphs.<name>. - config: resolve_policy_file_for (policy sibling of query_entries_for, no top-level fallback) + populated_top_level_blocks for the coherence check. - characterization tests (single-mode named -> per-graph; named + top-level -> bail; multi-mode top-level queries -> bail; CLI positional-URI -> top-level). - docs: policy.md, server.md, cli-reference.md. * docs: RFC-002 credentials keyed by server name (keychain/profile/env) Reworks the RFC's credentials model: secrets are keyed by server name — OS keychain `omnigraph:<server>` (preferred) -> a `[<server>]` profile in `~/.omnigraph/credentials` -> `OMNIGRAPH_TOKEN[_<SERVER>]` env (CI), the AWS/gh/kube model. `servers.<name>` is endpoint-only by default but may carry an explicit, secret-free `auth: { token: { env|file|command|keychain } }` source. The shipped `bearer_token_env` + `.env.omni` dotenv remain a legacy compat path; no `credentials.yaml`. * docs: RFC-002 — typed graph locator (storage/server/graph_id), not a uri string Add §1.1: the resolved graph address is a typed GraphLocator (Embedded{storage} | Remote{server, graph_id}), not a flat uri: String. Diagnoses the string model's cost in the code today (~16 is_remote_uri forks, TargetConfig can't express multi-server x multi-graph, the CLI bails on remote, the ts SDK models baseUrl+graphId separately) and settles the YAML naming so the key names the locus: - storage: (embedded) — shipped uri: is a deprecated alias - server: + graph_id: (remote) — graph_id defaults to the entry key - storage xor server, reject both/neither (no silent ambiguity) Kills the graphs:/graph: collision and the uri:-might-be-a-server ambiguity. Updates the §1/§8 examples and the entry-shape notes to the new naming. * Test: queries list must reject an unknown --target queries list opens no graph URI, so unknown-graph validation does not ride along on resolve_target_uri the way it does for every other command. The new test reproduces the gap: with an unknown --target the command currently exits 0 and prints the (empty) top-level registry instead of erroring like the URI-resolving commands do. Fails against current code; the fix follows. * Validate the graph selection in queries list Graph-existence validation was a side effect of URI resolution: every URI-resolving command rejects an unknown --target via resolve_target_uri, but queries list opens no URI, so query_entries_for(Some(unknown)) silently fell back to the top-level registry and showed the wrong (or empty) catalog. Make membership a property of the selection: add the fallible resolve_graph_selection alongside the infallible query_entries_for (a known name passes through, an unknown name errors with the same message as resolve_target_uri, None stays anonymous), and validate the selection in execute_queries_list. query_entries_for is unchanged — server boot's bare-URI path still needs its None -> top-level arm. * Surface policy-engine errors from stored-query invoke The invoke handler mapped every authorize_request failure to 404 ('stored query not found'), which collapsed the authorization decision (deny -> 403) together with operational failures (no actor -> 401, Cedar evaluation error -> 500). A real policy-engine 500 was hidden as a missing query. Separate the two concerns instead of sniffing the masked status. Extract authorize() returning an Authz { Allowed, Denied(msg) } decision and reserve Err for operational failures only; authorize_request becomes a thin wrapper that maps Denied -> 403, so the 16 deny-as-403 callers are unchanged. The invoke handler now matches the decision directly: a denial stays 404 (deny == missing, so the catalog can't be probed without the grant), while a 401/500 propagates with its true status. 500 is now a reachable outcome on POST /queries/{name}; document it in the endpoint responses and regenerate openapi.json. * Extract the named-graph/top-level coherence rule into one helper The rule 'a named graph uses its own graphs.<name> block, so a populated top-level block is a config error' lived inline in single-mode server boot. Extract it to OmnigraphConfig::ensure_top_level_blocks_honored so the same definition can be shared by the CLI selection gate (next commit) and the two can't drift. Boot calls the helper; the message is reworded context-neutral (drops 'serving') so it reads correctly from both boot and the CLI. Behavior-preserving: multi-graph mode keeps its own unconditional check, and single_mode_named_graph_rejects_top_level_blocks still passes. * Test: queries validate/list must reject a named graph with a top-level block Server boot refuses a config where a graph is selected by name yet a top-level queries:/policy.file block is populated (the block would be silently ignored). The CLI's queries validate/list resolve the same named selection but skip that coherence check, so they give a false green / list the per-graph block. The new test reproduces it: validate prints OK and list succeeds where boot would refuse. Fails against current code; the fix follows. * Enforce top-level coherence in the single CLI selection gate queries validate validated graph membership only as a side effect of URI resolution and queries list only via resolve_graph_selection's membership check; neither applied the named-graph/top-level coherence rule server boot enforces, so both gave a false green on a config boot refuses. Fold ensure_top_level_blocks_honored into resolve_graph_selection so it is the single gate that returns only valid + server-coherent selections, and route resolve_selected_graph (queries validate) through it; queries list already calls the gate. A named graph with a populated top-level block now errors in both commands, matching boot. A positional URI stays anonymous (top-level honored), so queries_validate_positional_uri_ignores_default_graph is unaffected. * docs: RFC-003 — MCP server surface for omnigraph-server Detailed MCP-transport design for the stored-query/MCP work, building on the shipped #128 registry. Corrects the draft against the branch head: the coarse invoke_query gate + 404 denial-masking are already wired (server_invoke_query), so per-query invoke_query scope (PolicyRequest has no query-name dimension yet) is the real prerequisite; positions the doc as superseding rfc-001's MCP transport (/mcp/tools+/mcp/invoke) and reconciles the shipped mcp.expose YAML form and the schema-introspection non-goal; grounds the parity surface in the actual omnigraph-ts package (13 tools with read/change ids, 2 resources). * docs(config): clarify graph config boundaries * fix(config): enforce graph-scoped policies and query validation * fix(cli): require graph selection for scoped query registries * fix(server): preserve named graph id in single mode policy * fix(cli): share graph identity for policy resolution * test(cli): cover policy tooling server graph selection * fix(cli): honor server graph for policy tooling --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-01 22:50:31 +02:00
```jsonc
{ "type": "object",
"properties": {
docs(rfc-003): fold external review into correct-by-design fixes An external review pass raised 8 findings; verified 7 valid (2 confirmed against the engine coercer). Folded them in as class-closing fixes rather than point patches: - §9.1 (③④, the headline): the JSON-Schema generator was a second hand-written copy of the engine's input contract — Blob (base64 vs URI string) and nullable (explicit null) were two drifts of one class. Move the projection to a single param_json_schema in omnigraph-api-types (next to ParamKind/ParamDescriptor), fix Blob -> {"type":"string","format":"uri"} (query_input.rs:449 / api-types:354 say blob-URI string) and nullable -> anyOf[..,null] (query_input.rs:273,296), and lock it to json_value_to_literal_typed with a schema/engine equivalence test so any future drift is a CI failure. - §7/§4 (①): replace the fail-open "empty allowed_origins => skip" with a total OriginPolicy and a single McpHostPolicy::from_bind constructor (remote default DenyBrowsers, enforced by origin_guard independent of rmcp's empty-list quirk). No absent-=>-skip state can be constructed. - §6/§12/§16 (②): make the non-paginated list seam a stated contract (Vec<T>, no nextCursor; meta mode bounds large catalogs) and drop the pagination claims the signature couldn't express. - §9.3 (⑦): built-in/stored tool-name collision becomes a cluster validate/boot error (fold built-in names into the registry uniqueness check), not a silent skip — per the invariants deny-list. - §9.2 (⑥): stored_query_mode folded into the one per-graph mcp: block (Phase 6), not a floating key; not configurable until that surface exists. - §10/§1 (⑧): scope derives from the per-graph mount; server-scoped `health` becomes graph-scoped `graph_health` (server liveness stays REST /healthz). - §13 (⑤, doc-only): OpenAI row corrected to the `authorization` field; Phase-1 reachability via static bearer is unchanged. §17 records the locked decisions; the validation header notes the review pass.
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"params": { "type": "object", "properties": { /* per-param param_json_schema(...) */ }, "required": [ /* names where nullable == false */ ] },
"branch": { "type": "string" },
"snapshot": { "type": "string" } // omit for mutation tools — mutation-against-snapshot is unrepresentable
},
"additionalProperties": false }
Stored-query registry foundation + config/CLI RFC-002 (#128) * MR-969: add stored-query registry config surface Introduce the `queries:` block in omnigraph.yaml — an inline `name -> entry` map of stored queries, per-graph (`graphs.<id>.queries`) and top-level for single-graph mode, mirroring how `policy` is wired in both modes. Each entry points at a `.gq` file and carries optional MCP exposure settings (`expose`, `tool_name`), defaulting to not-exposed. Additive: absent `queries:` leaves current behavior unchanged. - QueryEntry { file, mcp: McpSettings { expose, tool_name } } - `queries` field on TargetConfig + OmnigraphConfig (serde default) - query_entries() / target_query_entries() accessors - resolve_query_file() — base_dir-relative `.gq` path resolution - round-trip + absent-block tests Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add stored-query registry loader and GraphHandle wiring Add a `queries` module: QueryRegistry loads each declared `.gq` entry, parses it, and selects the query whose symbol matches the manifest key, asserting the two agree (key == `query <name>` symbol). Identity is the query name; a key/symbol mismatch is a load-time error. Errors are collected, not fail-fast, so a bad registry surfaces every broken entry at once. Schema type-checking is deliberately left to a separate pass so the loader stays callable without an open engine. Thread an `Option<Arc<QueryRegistry>>` through GraphHandle alongside the per-graph policy; the URI-canonicalizing clone propagates it. Production openers default to None for now — the boot path loads and attaches the registry in a later change. - QueryRegistry::{from_specs, load, lookup, iter}; StoredQuery::is_mutation - GraphHandle.queries field, propagated on canonical clone - registry unit tests: identity match/mismatch, multi-query selection, per-entry parse errors, error collection, mutation classification Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: add RFC-002 config & CLI architecture Layered config (user-global ~/.config/omnigraph/ + per-project), a unifying `target` abstraction resolving to (locus, graph, sub-state, credential) with embedded-URI XOR remote-server loci, multi-server × multi-graph client targeting, credentials by-reference, and the file-naming decision: project and server config are one artifact (`omnigraph.yaml`); the only differently-named file is the user-global `config.yaml`, split by scope not role. Includes the 12-factor bind portability rule (prefer --bind/OMNIGRAPH_BIND over a committed server.bind) and the defined-locally / invoked-remotely model for stored queries. Derived from first principles working backwards from what the engine enables; validated against kube/Helix/git/compose. Linked from docs/dev/index.md. Proposed; phased rollout for the MR-973/974/981 family. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add check() to validate stored queries against the live schema A pure check(registry, catalog) that type-checks every stored query via the same typecheck_query_decl the engine runs for inline queries — no parallel implementation. Failures are collected, not fail-fast, so an operator sees every broken query (e.g. a type/property a migration renamed or removed) in one pass. Breakages are fatal (the boot path will refuse to start); warnings are advisory. Pure over (registry, catalog) so it is callable both at boot (engine catalog) and offline from the CLI without an open engine. Advisory lint: an mcp.expose:true query that declares a Vector(N) parameter warns — an LLM cannot supply a raw embedding vector; such a query should take a String parameter and embed server-side. Warns rather than rejects, since service-to-service callers may pass vectors. - CheckReport { breakages, warnings }; has_breakages / is_clean - tests: valid query, unknown type, unknown property, collect-not-fail-fast, vector-param-exposed warns, unexposed silent Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Drop internal plan-label refs from stored-query config comments Doc comments referenced sequencing labels ("C2") that mean nothing to a reader; reword to describe the behavior directly. Comment-only. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile aliases with the role model in RFC-002 Place the existing client-only `aliases:` block in the client/server role split: aliases are client-role (CLI, embedded, ungated) and may live in both user-global and project config; `queries:` is server-role (deployment manifest only). They overlap as "name -> .gq"; `queries:` is the superset, and the end-state subsumes aliases (definition -> queries, target/branch/format -> client invocation context, positional args -> CLI sugar). v1 keeps aliases unchanged. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: make RFC-002 config global-first, project-optional The global user config is the primary, self-sufficient default; the CLI works from any directory with no project file (the kubectl/aws/gh posture), a deliberate flip from today's project-anchored behavior. The project omnigraph.yaml becomes an optional repo-scoped override and the deployment manifest. Uniform schema, both layers optional; global can hold any section including a personal server's graphs/queries. Additive: project still overrides global; the flip adds a fallback layer below the project file rather than removing it. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: justify XDG ~/.config/omnigraph over legacy ~/.omnigraph in RFC-002 Make the rationale explicit: XDG-first because OmniGraph is a client that will cache remote catalogs and keep session state alongside secrets, and XDG separates config / cache / state into distinct dirs (clear cache without touching creds; backups skip cache) whereas a single ~/.omnigraph/ mixes them. Honor ~/.omnigraph/ as a fallback for the peer-group (aws/kube/docker/helix) expectation. Add XDG_CACHE_HOME / XDG_STATE_HOME to the override precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: build RFC-002 credentials on the existing env-file mechanism OmniGraph already has credentials-by-reference: bearer_token_env names the env var, and auth.env_file is a git-ignored dotenv the CLI auto-loads (real env vars win), resolved via resolve_remote_bearer_token. The RFC's proposed credentials.yaml + token_env were redundant parallel inventions. Reconcile: reuse bearer_token_env (extend to servers.<name>) and auth.env_file (add a global ~/.config/omnigraph/.env layered under the project .env.omni); OS keychain is an additive future resolver. No new credentials.yaml. Updated summary, non-goals, background, file-naming, credentials, example, login, migration, rollout. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: use single ~/.omnigraph dir (Helix-style), not XDG, in RFC-002 Reverse the earlier XDG-first call. The prior argument rested on a false dichotomy (single-dir => mixed config/cache/state); in fact the peer tools (aws, kube, helix) achieve separation via SUBDIRECTORIES inside one ~/.tool/ dir (~/.aws/sso/cache/, ~/.kube/cache/), getting cache hygiene AND one discoverable place. So everything goes under ~/.omnigraph/: config.yaml, credentials (dotenv, 0600), cache/, state/. Lower cognitive load, matches what DB/cloud-CLI users expect, matches Helix. OMNIGRAPH_HOME overrides; $XDG_CONFIG_HOME optionally honored but ~/.omnigraph/ is canonical. Updated all paths, the rationale paragraph, the file-naming table (added a cache/state row), and env precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile RFC-002 with shipped/planned CLI tickets Align with reality found in existing tickets: - Noun is graph/graphs, not target/targets (MR-603 done renamed the config key targets->graphs, flag --graph). Use graphs:/--graph; an entry is embedded (uri) XOR remote (server + remote graph name). - ~/.omnigraph/ confirmed by MR-581 (og template pull, done) which already quick-starts templates there. - Templates already exist (MR-581/MR-531) — not invented here. - The init family is already specced (init, quickstart MR-973, serve MR-970, prune MR-972, mcp install MR-974, agent-mode MR-981); this RFC only adds the user route (~/.omnigraph/config.yaml + login). - aliases: -> operations: planned (MR-839). - bearer_token_env gap tracked in MR-971. - query lint/check already exist (MR-639) — registry validator must not collide with the singular `query check`. Add a Reconciliation section; fix the canonical example to graphs:/--graph. Also: merge semantics refined (deep-merge settings, replace named entries, replace lists, config view --resolved --show-origin). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: correct stale-ticket claims and fold init/bootstrap design into RFC-002 Verify against code, not ticket statuses (MR-581 is marked done but is stale/unbuilt): no ~/.omnigraph usage, no template/serve/quickstart/ prune/login commands exist; config still uses aliases: (no operations:). So ~/.omnigraph/ stands on peer-convention merits alone, and templates are a design question, not a foothold. Add §7.5: the three-tier init model (user route = login + ~/.omnigraph/config.yaml; thin project init; fat quickstart + templates) with first-principles positions (split init/login, in-place refuse-if-exists, interactive vs --auto/agent-mode, --template flag, secrets-on-scaffold gitignore rule). This RFC owns only the user route; the rest are sibling tickets (MR-973/970/972/974/981). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: breadboard + slice Shape A in RFC-002 Add the implementation breadboard (places P1-P5, affordances N1-N14 with NEW markers, mermaid) and five vertical slices for the selected config/ CLI/init shape: V1 global layer + merge engine + config view; V2 remote graphs + HTTP-client path + credential resolution; V3 omnigraph login; V4 init-hardening + quickstart + templates (rides MR-970); V5 agent-mode (MR-981). Rollout reordered to the slice sequence; spikes X1-X4 gate their owning slice. V1-V2 close the substantive client->server gap. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add InvokeQuery Cedar action (coarse, graph-scoped) A per-graph, branch-scoped action that gates invoking a server-side stored query by name. Coarse for now: an `invoke_query` allow rule permits any stored query on the graph; a future, additive refinement adds an optional per-query-name scope without changing rules written against the coarse action. Enforcement is at the HTTP boundary; the engine `_as` writers still enforce read/change per the query body, so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). No call site yet — the invocation handler wires it in a later change (same pattern as Admin/GraphList added ahead of consumers). - variant + as_str/resource_kind(Graph)/FromStr/uses_branch_scope - Cedar schema: invoke_query appliesTo Graph - tests: per-graph allow/deny, branch-scope accepted Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Load and type-check stored queries at server boot, refusing breakage At startup the server now loads each graph's stored-query registry, type-checks every query against that graph's live schema, and refuses to boot if any query references a type/property the schema doesn't have (same posture as bad policy YAML) — so schema drift surfaces at the deploy boundary, not silently at invocation. Non-blocking warnings are logged. The validated registry is attached to the GraphHandle (the two production sites previously held `queries: None`). Loading (parse + key==symbol identity) happens at settings-build time where the config is in scope; the schema type-check happens after each engine opens (single mode in `open_single_with_queries`, multi mode in `open_single_graph`). `open_with_bearer_tokens_and_policy` delegates with an empty registry so its 18 test callers are unchanged; the public `new_*` constructors are unchanged (only the private build path threads the registry). - ServerConfigMode::Single / GraphStartupConfig carry the loaded registry - boot tests: valid registry boots; type-broken query refuses boot + names it Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add `omnigraph queries validate` and `queries list` CLI `queries validate` type-checks the stored-query registry against the live schema offline — it opens the selected graph, runs the same check() the server runs at boot, prints breakages/warnings (human or --json), and exits non-zero on any breakage — so an operator can catch a query broken by a schema change without restarting the server. `queries list` prints each registered query's name, MCP exposure, and typed params. Named `validate` (not `check`) to avoid overlap with the existing `omnigraph lint` — `query check`/`query lint` are already deprecated argv-shims to `lint`. Registry entries resolve like the server: a named graph uses its per-graph `queries:`; otherwise the top-level one. - Queries subcommand group; reuses QueryRegistry::load + check from omnigraph-server; local-only (needs the schema), mirrors lint - tests: clean registry exits 0, broken query exits non-zero + names it, list shows the query and its typed params Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Route registry selection through one shared query_entries_for The "which queries: block applies for graph X" rule existed twice — the server boot path and the CLI's registry_entries — and had already drifted: the CLI carried an unreachable unwrap_or_else fallback the server lacked. Add OmnigraphConfig::query_entries_for(graph: Option<&str>) as the single definition (named graph -> its per-graph block; otherwise top-level) and route all three sites through it: server single mode, server multi-graph loop, and the CLI. The CLI's dead fallback arm is deleted; CLI and server now resolve identically by construction. No behavior change. Extends the config round-trip test to pin the selector, including the unknown-name -> top-level fallback the deleted CLI arm covered. * Funnel registry validation through one validate_and_attach gate The check -> refuse-on-breakage -> log-warnings -> empty->None block was copy-pasted across both open paths (single mode and the multi-graph per-graph open), differing only by the graph label. A third opener could attach a registry that was never schema-checked. Extract validate_and_attach(queries, catalog, label) -> Option<Arc<..>> as the single gate both paths call, so attaching an unchecked registry is no longer expressible. The catalog handle is an owned Arc, so calling it before the multi-mode policy match (which rebinds db) is borrow-clean. No behavior change. Adds a direct unit test of the helper (empty / clean / breakage incl. the graph label in the message) — covering the multi-graph path's logic, which previously had no boot-refusal coverage. * Resolve param types structurally in the MCP vector lint The exposed-query advisory detected vector params with type_name.starts_with("Vector(") — a second copy of the compiler's own ScalarType::from_str_name vector parsing that could drift from it. Key the lint off PropType::from_param_type_name + ScalarType::Vector(_) instead, the one canonical resolver the type system already uses. Any future param-suppliability lint now reads the structured type rather than scanning the surface string. Behavior-preserving: the grammar forbids list-of-vector params (list_type = "[" base_type "]", and base_type excludes Vector), so the only input where the structured and string checks could differ is unparseable. Adds a guard test that an exposed String param does not false-trigger the warning. * Refuse duplicate MCP tool names across exposed stored queries The effective MCP tool name (explicit tool_name, else the query name) is a second identity namespace beside the registry key, but nothing enforced it unique — two exposed queries could claim one catalog key, and each consumer re-derived the name ad hoc. Add StoredQuery::effective_tool_name() as the one definition, and a load-time uniqueness pass in from_specs over exposed queries: a collision is a collected LoadError naming the loser and the winner. Scoped to exposed queries (unexposed have no MCP tool); deterministic over the BTreeMap so the first-declared wins and the error order is stable. New (rare) refusal: a config with colliding exposed tool names now fails `omnigraph queries validate` offline and refuses server boot, the same posture as a malformed registry. Release-note-worthy. Test-first: duplicate_exposed_tool_name_is_a_load_error (red before the pass, green after) + a CLI offline test; the unexposed sibling pins the exposed-only scope; effective_tool_name asserts folded into the load test. * docs: document the queries registry, CLI, and invoke_query action The stored-query surface shipped without user docs. Add it, per the same-PR maintenance contract: - policy.md: invoke_query as per-graph action #10 (branch-scoped), with the double-gating note; renumber graph_list; add it to the branch_scope list. - cli-reference.md: the `queries validate | list` command, and the `queries:` config block (per-graph + top-level) with mcp.expose/tool_name and the tool-name uniqueness rule. - server.md: boot-time stored-query type-check (refuse on breakage), noting invocation over HTTP/MCP is not yet exposed. * Add POST /queries/{name} stored-query invocation handler Invoke a curated server-side stored query by name: source + name come from the per-graph queries: registry, the client sends only runtime inputs (params, branch, snapshot). Gated by the invoke_query Cedar action at the boundary; the handler delegates to the existing run_query/run_mutate, whose inner Read/Change enforce still runs — so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). - InvokeStoredQueryRequest + an untagged InvokeStoredQueryResponse { Read(ReadOutput), Change(ChangeOutput) } → one Json<_> return type and a oneOf 200 schema (a correct contract, not a wrong-but-simple one). - Route lives in per_graph_protected → single-mode /queries/{name} and multi-mode /graphs/{id}/queries/{name} for free. - Deny == unknown: an invoke_query denial and a missing query both return the same 404, so the catalog can't be probed by an unauthorized caller. - OpenAPI regenerated; tests cover read, mutation double-gate (403 vs 200), bad-param 400, and the identical-404 deny path. Completes the MR-969 V1 invocation slice (registry + /queries/{name} + invoke_query). * docs: stored-query invocation endpoint; flip the not-yet-exposed caveat Now that POST /queries/{name} ships (C7), document it: add the endpoint to server.md's inventory + an invocation section (body, untagged read/mutate envelope, invoke_query gate, double-gated mutations, deny == 404), and flip the startup note that said invocation was not yet exposed. In policy.md, replace "no invocation call site yet" on the invoke_query action with a pointer to the endpoint. * Scope the stored-query 404-hiding claim to non-invoke_query callers Review found the deny==404 catalog-hiding was overstated as a contract: it holds only at the outer invoke_query gate. A caller that HOLDS invoke_query but lacks read/change gets the inner gate's 403 for an existing query vs 404 for an unknown one — so existence is visible to grant-holders by design (the intended double-gate). The handler docstring, OpenAPI 404 description, and server.md all claimed the 404 was airtight against any denied actor. Correct the wording in all three (no behavior change) and add the missing symmetric test (invoke_query but no read -> 403 for an existing query, 404 for unknown) so the actual contract is pinned. Also document that in default-deny mode (tokens, no policy) every invocation 404s until an invoke_query rule is configured. Nits: the from_specs collision comment said "first declared wins" but it is lexicographically-first by name (BTreeMap); the effective_tool_name docstring overclaimed the CLI display routes through it (it resolves the rule on its own output DTO). * Default mcp.expose to true (the manifest entry is the opt-in) expose controls MCP-catalog membership only — it is not an authorization gate (invocation is gated by invoke_query regardless). So requiring a per-query mcp.expose: true was friction with no safety benefit: a non-exposed query is still HTTP-invocable by name. Flip the default so declaring a query in the manifest exposes it to the agent tool catalog by default; expose: false is the escape hatch for service-only queries. Both the absent-mcp path (Default impl) and the present-but-no-expose path (serde default fn) now yield true. Doc comments + cli-reference updated; the config round-trip test asserts the new default. * Add GET /queries stored-query catalog endpoint List a graph's mcp.expose stored queries as a typed tool catalog so a client (the MCP server) can register them as tools without fetching .gq source. Each entry carries name, MCP tool_name, description/instruction, a read/mutate flag, and decomposed typed params (kind enum: string|bool|int| bigint|float|date|datetime|blob|vector|list, plus item_kind for lists and vector_dim) — so the consumer builds an input schema with a closed match and never re-parses omnigraph type spelling. I64/U64 are bigint (string on the wire): a JSON number loses precision past 2^53 and the engine already accepts decimal strings. Read-gated (works in default-deny; the catalog is graph-wide, authorized against main). NOT Cedar-filtered per query yet — a reader can list a query whose invoke_query they lack (documented gap until per-query authz lands); invocation stays invoke_query-gated + deny==404. - api: QueriesCatalogOutput / QueryCatalogEntry / ParamDescriptor / ParamKind + query_catalog_entry (reuses PropType::from_param_type_name; scalar_kind is exhaustive, so a new ScalarType is a compile error here until catalogued). - GET /queries route in per_graph_protected (→ /graphs/{id}/queries in multi mode); OpenAPI regenerated; path allowlists updated. - Tests: projection unit (every kind, list, vector, nullable, mutation, empty) + handler (exposed-only filter, read-gate probe-oracle, empty registry). * docs: GET /queries stored-query catalog endpoint Document the catalog: the endpoint table row (GET /queries, read-gated), a catalog section (typed-param kind enum, bigint/date/datetime/blob-as-string, graph-wide/branch-independent, mcp.expose default true, the read-gated probe-oracle gap), and flip the startup note now that the catalog ships. * Collect file-I/O and parse errors in QueryRegistry::load in one pass load() early-returned on any unreadable .gq file, masking parse / identity / tool-name-collision errors in the OTHER (readable) files — so an operator fixed the missing file, restarted, and only then saw the next broken query. Now it collects I/O errors but still runs from_specs on the readable specs and returns the union, so every broken entry surfaces at once (matching the collected-errors contract the rest of the registry already follows). Safe: from_specs' tool-name collision check runs over loaded queries only, so dropping an I/O-failed entry can only under-report a collision, never invent one. I/O errors are ordered first (BTreeMap key order), then spec errors. Adds a load-level test (tempdir: a valid, a missing, and a parse-broken .gq) asserting all three surface in one Err — confirmed red before the fix. * Make invoke_query graph-scoped (one branch authority) invoke_query gates reaching the curated stored-query surface — a graph-level capability. Per-branch/snapshot access is already enforced by the inner read/change gate in run_query/run_mutate (authorized against the resolved branch), so branch-scoping the outer gate was redundant AND wrong for snapshot reads (it defaulted to main). Drop the branch dimension: remove InvokeQuery from uses_branch_scope (it joins admin as graph-scoped) and authorize the boundary gate with branch: None. Lossless: an actor confined to branch X by their read/change rules can still only invoke a stored query that touches X. A rule that sets branch_scope on invoke_query is now rejected by validate() — write invoke_query in its own rule. Ripple (atomic): restructure the server invoke fixture so invoke_query sits in its own branch_scope-free rule; invert invoke_query_is_branch_scoped -> invoke_query_rejects_branch_scope; the per-graph authorize test uses branch: None; docs (policy.md, server.md, the InvokeQuery doc). No wire/OpenAPI change. * Resolve graph config by identity, not server mode Which policy/queries block applies for a graph was decided three different, mode-dependent ways: single-mode boot used top-level even for a named graph; multi-mode used per-graph (and silently ignored a top-level queries block); the CLI used per-graph for a named target. So `queries validate --target prod` could check a different registry than the single-mode server loaded, and a named graph's per-graph policy/queries were silently shadowed. Make config a function of graph IDENTITY: a graph served by NAME (--target/server.graph, a graphs: entry) uses its own graphs.<name>.{policy, queries}; a bare URI is anonymous and uses top-level. One rule, applied by single-mode boot, multi-mode boot, and the CLI — so they can't diverge and the CLI predicts the server exactly. No silent ignore: serving a named graph while a top-level policy/queries block is populated now refuses boot, naming the block (the multi-mode top-level-policy bail, extended to queries and to single-mode-named). The CLI's `queries validate` derives the schema URI and the registry from ONE selection, and a positional URI forces anonymous (ignoring cli.graph) so the two can't come from different graphs. BREAKING (released behavior): single mode by name (--target/server.graph) with top-level policy/queries previously used top-level; it now uses the per-graph block and refuses boot if top-level is also populated. Bare-URI single mode is unchanged. Loud, with migration text pointing at graphs.<name>. - config: resolve_policy_file_for (policy sibling of query_entries_for, no top-level fallback) + populated_top_level_blocks for the coherence check. - characterization tests (single-mode named -> per-graph; named + top-level -> bail; multi-mode top-level queries -> bail; CLI positional-URI -> top-level). - docs: policy.md, server.md, cli-reference.md. * docs: RFC-002 credentials keyed by server name (keychain/profile/env) Reworks the RFC's credentials model: secrets are keyed by server name — OS keychain `omnigraph:<server>` (preferred) -> a `[<server>]` profile in `~/.omnigraph/credentials` -> `OMNIGRAPH_TOKEN[_<SERVER>]` env (CI), the AWS/gh/kube model. `servers.<name>` is endpoint-only by default but may carry an explicit, secret-free `auth: { token: { env|file|command|keychain } }` source. The shipped `bearer_token_env` + `.env.omni` dotenv remain a legacy compat path; no `credentials.yaml`. * docs: RFC-002 — typed graph locator (storage/server/graph_id), not a uri string Add §1.1: the resolved graph address is a typed GraphLocator (Embedded{storage} | Remote{server, graph_id}), not a flat uri: String. Diagnoses the string model's cost in the code today (~16 is_remote_uri forks, TargetConfig can't express multi-server x multi-graph, the CLI bails on remote, the ts SDK models baseUrl+graphId separately) and settles the YAML naming so the key names the locus: - storage: (embedded) — shipped uri: is a deprecated alias - server: + graph_id: (remote) — graph_id defaults to the entry key - storage xor server, reject both/neither (no silent ambiguity) Kills the graphs:/graph: collision and the uri:-might-be-a-server ambiguity. Updates the §1/§8 examples and the entry-shape notes to the new naming. * Test: queries list must reject an unknown --target queries list opens no graph URI, so unknown-graph validation does not ride along on resolve_target_uri the way it does for every other command. The new test reproduces the gap: with an unknown --target the command currently exits 0 and prints the (empty) top-level registry instead of erroring like the URI-resolving commands do. Fails against current code; the fix follows. * Validate the graph selection in queries list Graph-existence validation was a side effect of URI resolution: every URI-resolving command rejects an unknown --target via resolve_target_uri, but queries list opens no URI, so query_entries_for(Some(unknown)) silently fell back to the top-level registry and showed the wrong (or empty) catalog. Make membership a property of the selection: add the fallible resolve_graph_selection alongside the infallible query_entries_for (a known name passes through, an unknown name errors with the same message as resolve_target_uri, None stays anonymous), and validate the selection in execute_queries_list. query_entries_for is unchanged — server boot's bare-URI path still needs its None -> top-level arm. * Surface policy-engine errors from stored-query invoke The invoke handler mapped every authorize_request failure to 404 ('stored query not found'), which collapsed the authorization decision (deny -> 403) together with operational failures (no actor -> 401, Cedar evaluation error -> 500). A real policy-engine 500 was hidden as a missing query. Separate the two concerns instead of sniffing the masked status. Extract authorize() returning an Authz { Allowed, Denied(msg) } decision and reserve Err for operational failures only; authorize_request becomes a thin wrapper that maps Denied -> 403, so the 16 deny-as-403 callers are unchanged. The invoke handler now matches the decision directly: a denial stays 404 (deny == missing, so the catalog can't be probed without the grant), while a 401/500 propagates with its true status. 500 is now a reachable outcome on POST /queries/{name}; document it in the endpoint responses and regenerate openapi.json. * Extract the named-graph/top-level coherence rule into one helper The rule 'a named graph uses its own graphs.<name> block, so a populated top-level block is a config error' lived inline in single-mode server boot. Extract it to OmnigraphConfig::ensure_top_level_blocks_honored so the same definition can be shared by the CLI selection gate (next commit) and the two can't drift. Boot calls the helper; the message is reworded context-neutral (drops 'serving') so it reads correctly from both boot and the CLI. Behavior-preserving: multi-graph mode keeps its own unconditional check, and single_mode_named_graph_rejects_top_level_blocks still passes. * Test: queries validate/list must reject a named graph with a top-level block Server boot refuses a config where a graph is selected by name yet a top-level queries:/policy.file block is populated (the block would be silently ignored). The CLI's queries validate/list resolve the same named selection but skip that coherence check, so they give a false green / list the per-graph block. The new test reproduces it: validate prints OK and list succeeds where boot would refuse. Fails against current code; the fix follows. * Enforce top-level coherence in the single CLI selection gate queries validate validated graph membership only as a side effect of URI resolution and queries list only via resolve_graph_selection's membership check; neither applied the named-graph/top-level coherence rule server boot enforces, so both gave a false green on a config boot refuses. Fold ensure_top_level_blocks_honored into resolve_graph_selection so it is the single gate that returns only valid + server-coherent selections, and route resolve_selected_graph (queries validate) through it; queries list already calls the gate. A named graph with a populated top-level block now errors in both commands, matching boot. A positional URI stays anonymous (top-level honored), so queries_validate_positional_uri_ignores_default_graph is unaffected. * docs: RFC-003 — MCP server surface for omnigraph-server Detailed MCP-transport design for the stored-query/MCP work, building on the shipped #128 registry. Corrects the draft against the branch head: the coarse invoke_query gate + 404 denial-masking are already wired (server_invoke_query), so per-query invoke_query scope (PolicyRequest has no query-name dimension yet) is the real prerequisite; positions the doc as superseding rfc-001's MCP transport (/mcp/tools+/mcp/invoke) and reconciles the shipped mcp.expose YAML form and the schema-introspection non-goal; grounds the parity surface in the actual omnigraph-ts package (13 tools with read/change ids, 2 resources). * docs(config): clarify graph config boundaries * fix(config): enforce graph-scoped policies and query validation * fix(cli): require graph selection for scoped query registries * fix(server): preserve named graph id in single mode policy * fix(cli): share graph identity for policy resolution * test(cli): cover policy tooling server graph selection * fix(cli): honor server graph for policy tooling --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
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```
docs(rfc-003): fold external review into correct-by-design fixes An external review pass raised 8 findings; verified 7 valid (2 confirmed against the engine coercer). Folded them in as class-closing fixes rather than point patches: - §9.1 (③④, the headline): the JSON-Schema generator was a second hand-written copy of the engine's input contract — Blob (base64 vs URI string) and nullable (explicit null) were two drifts of one class. Move the projection to a single param_json_schema in omnigraph-api-types (next to ParamKind/ParamDescriptor), fix Blob -> {"type":"string","format":"uri"} (query_input.rs:449 / api-types:354 say blob-URI string) and nullable -> anyOf[..,null] (query_input.rs:273,296), and lock it to json_value_to_literal_typed with a schema/engine equivalence test so any future drift is a CI failure. - §7/§4 (①): replace the fail-open "empty allowed_origins => skip" with a total OriginPolicy and a single McpHostPolicy::from_bind constructor (remote default DenyBrowsers, enforced by origin_guard independent of rmcp's empty-list quirk). No absent-=>-skip state can be constructed. - §6/§12/§16 (②): make the non-paginated list seam a stated contract (Vec<T>, no nextCursor; meta mode bounds large catalogs) and drop the pagination claims the signature couldn't express. - §9.3 (⑦): built-in/stored tool-name collision becomes a cluster validate/boot error (fold built-in names into the registry uniqueness check), not a silent skip — per the invariants deny-list. - §9.2 (⑥): stored_query_mode folded into the one per-graph mcp: block (Phase 6), not a floating key; not configurable until that surface exists. - §10/§1 (⑧): scope derives from the per-graph mount; server-scoped `health` becomes graph-scoped `graph_health` (server liveness stays REST /healthz). - §13 (⑤, doc-only): OpenAI row corrected to the `authorization` field; Phase-1 reachability via static bearer is unchanged. §17 records the locked decisions; the validation header notes the review pass.
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`required` lists only non-nullable param names; a nullable param is both absent from
`required` **and** carries the `null`-union from `param_json_schema` (§9.1), so omitting
it *and* passing explicit `null` both validate — matching the coercer.
Knobs (`branch`/`snapshot`) and the query's own params live in separate namespaces, so
docs(rfc-003): fold external review into correct-by-design fixes An external review pass raised 8 findings; verified 7 valid (2 confirmed against the engine coercer). Folded them in as class-closing fixes rather than point patches: - §9.1 (③④, the headline): the JSON-Schema generator was a second hand-written copy of the engine's input contract — Blob (base64 vs URI string) and nullable (explicit null) were two drifts of one class. Move the projection to a single param_json_schema in omnigraph-api-types (next to ParamKind/ParamDescriptor), fix Blob -> {"type":"string","format":"uri"} (query_input.rs:449 / api-types:354 say blob-URI string) and nullable -> anyOf[..,null] (query_input.rs:273,296), and lock it to json_value_to_literal_typed with a schema/engine equivalence test so any future drift is a CI failure. - §7/§4 (①): replace the fail-open "empty allowed_origins => skip" with a total OriginPolicy and a single McpHostPolicy::from_bind constructor (remote default DenyBrowsers, enforced by origin_guard independent of rmcp's empty-list quirk). No absent-=>-skip state can be constructed. - §6/§12/§16 (②): make the non-paginated list seam a stated contract (Vec<T>, no nextCursor; meta mode bounds large catalogs) and drop the pagination claims the signature couldn't express. - §9.3 (⑦): built-in/stored tool-name collision becomes a cluster validate/boot error (fold built-in names into the registry uniqueness check), not a silent skip — per the invariants deny-list. - §9.2 (⑥): stored_query_mode folded into the one per-graph mcp: block (Phase 6), not a floating key; not configurable until that surface exists. - §10/§1 (⑧): scope derives from the per-graph mount; server-scoped `health` becomes graph-scoped `graph_health` (server liveness stays REST /healthz). - §13 (⑤, doc-only): OpenAI row corrected to the `authorization` field; Phase-1 reachability via static bearer is unchanged. §17 records the locked decisions; the validation header notes the review pass.
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a query parameter literally named `branch`/`snapshot` cannot collide.
**Built-in vs stored name collision is a load-time error, never a silent skip (⑦).**
The earlier "a colliding stored tool is skipped (built-ins win)" is a silent failure —
a query an operator published just vanishes from the catalog at projection time, which
the deny-list in [docs/dev/invariants.md](invariants.md) forbids. By-design fix: fold
the built-in tool names (a stable closed set from the `Builtin` enum, §10) into the
**same per-graph uniqueness check the registry already runs** at load
(`duplicate_tool_name`, today stored-vs-stored only). A stored `effective_tool_name()`
that shadows a built-in then fails `cluster validate`/server boot **loudly**, before
serving — a runtime-shadowed query becomes structurally impossible rather than silently
dropped.
Stored-query registry foundation + config/CLI RFC-002 (#128) * MR-969: add stored-query registry config surface Introduce the `queries:` block in omnigraph.yaml — an inline `name -> entry` map of stored queries, per-graph (`graphs.<id>.queries`) and top-level for single-graph mode, mirroring how `policy` is wired in both modes. Each entry points at a `.gq` file and carries optional MCP exposure settings (`expose`, `tool_name`), defaulting to not-exposed. Additive: absent `queries:` leaves current behavior unchanged. - QueryEntry { file, mcp: McpSettings { expose, tool_name } } - `queries` field on TargetConfig + OmnigraphConfig (serde default) - query_entries() / target_query_entries() accessors - resolve_query_file() — base_dir-relative `.gq` path resolution - round-trip + absent-block tests Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add stored-query registry loader and GraphHandle wiring Add a `queries` module: QueryRegistry loads each declared `.gq` entry, parses it, and selects the query whose symbol matches the manifest key, asserting the two agree (key == `query <name>` symbol). Identity is the query name; a key/symbol mismatch is a load-time error. Errors are collected, not fail-fast, so a bad registry surfaces every broken entry at once. Schema type-checking is deliberately left to a separate pass so the loader stays callable without an open engine. Thread an `Option<Arc<QueryRegistry>>` through GraphHandle alongside the per-graph policy; the URI-canonicalizing clone propagates it. Production openers default to None for now — the boot path loads and attaches the registry in a later change. - QueryRegistry::{from_specs, load, lookup, iter}; StoredQuery::is_mutation - GraphHandle.queries field, propagated on canonical clone - registry unit tests: identity match/mismatch, multi-query selection, per-entry parse errors, error collection, mutation classification Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: add RFC-002 config & CLI architecture Layered config (user-global ~/.config/omnigraph/ + per-project), a unifying `target` abstraction resolving to (locus, graph, sub-state, credential) with embedded-URI XOR remote-server loci, multi-server × multi-graph client targeting, credentials by-reference, and the file-naming decision: project and server config are one artifact (`omnigraph.yaml`); the only differently-named file is the user-global `config.yaml`, split by scope not role. Includes the 12-factor bind portability rule (prefer --bind/OMNIGRAPH_BIND over a committed server.bind) and the defined-locally / invoked-remotely model for stored queries. Derived from first principles working backwards from what the engine enables; validated against kube/Helix/git/compose. Linked from docs/dev/index.md. Proposed; phased rollout for the MR-973/974/981 family. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add check() to validate stored queries against the live schema A pure check(registry, catalog) that type-checks every stored query via the same typecheck_query_decl the engine runs for inline queries — no parallel implementation. Failures are collected, not fail-fast, so an operator sees every broken query (e.g. a type/property a migration renamed or removed) in one pass. Breakages are fatal (the boot path will refuse to start); warnings are advisory. Pure over (registry, catalog) so it is callable both at boot (engine catalog) and offline from the CLI without an open engine. Advisory lint: an mcp.expose:true query that declares a Vector(N) parameter warns — an LLM cannot supply a raw embedding vector; such a query should take a String parameter and embed server-side. Warns rather than rejects, since service-to-service callers may pass vectors. - CheckReport { breakages, warnings }; has_breakages / is_clean - tests: valid query, unknown type, unknown property, collect-not-fail-fast, vector-param-exposed warns, unexposed silent Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Drop internal plan-label refs from stored-query config comments Doc comments referenced sequencing labels ("C2") that mean nothing to a reader; reword to describe the behavior directly. Comment-only. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile aliases with the role model in RFC-002 Place the existing client-only `aliases:` block in the client/server role split: aliases are client-role (CLI, embedded, ungated) and may live in both user-global and project config; `queries:` is server-role (deployment manifest only). They overlap as "name -> .gq"; `queries:` is the superset, and the end-state subsumes aliases (definition -> queries, target/branch/format -> client invocation context, positional args -> CLI sugar). v1 keeps aliases unchanged. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: make RFC-002 config global-first, project-optional The global user config is the primary, self-sufficient default; the CLI works from any directory with no project file (the kubectl/aws/gh posture), a deliberate flip from today's project-anchored behavior. The project omnigraph.yaml becomes an optional repo-scoped override and the deployment manifest. Uniform schema, both layers optional; global can hold any section including a personal server's graphs/queries. Additive: project still overrides global; the flip adds a fallback layer below the project file rather than removing it. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: justify XDG ~/.config/omnigraph over legacy ~/.omnigraph in RFC-002 Make the rationale explicit: XDG-first because OmniGraph is a client that will cache remote catalogs and keep session state alongside secrets, and XDG separates config / cache / state into distinct dirs (clear cache without touching creds; backups skip cache) whereas a single ~/.omnigraph/ mixes them. Honor ~/.omnigraph/ as a fallback for the peer-group (aws/kube/docker/helix) expectation. Add XDG_CACHE_HOME / XDG_STATE_HOME to the override precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: build RFC-002 credentials on the existing env-file mechanism OmniGraph already has credentials-by-reference: bearer_token_env names the env var, and auth.env_file is a git-ignored dotenv the CLI auto-loads (real env vars win), resolved via resolve_remote_bearer_token. The RFC's proposed credentials.yaml + token_env were redundant parallel inventions. Reconcile: reuse bearer_token_env (extend to servers.<name>) and auth.env_file (add a global ~/.config/omnigraph/.env layered under the project .env.omni); OS keychain is an additive future resolver. No new credentials.yaml. Updated summary, non-goals, background, file-naming, credentials, example, login, migration, rollout. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: use single ~/.omnigraph dir (Helix-style), not XDG, in RFC-002 Reverse the earlier XDG-first call. The prior argument rested on a false dichotomy (single-dir => mixed config/cache/state); in fact the peer tools (aws, kube, helix) achieve separation via SUBDIRECTORIES inside one ~/.tool/ dir (~/.aws/sso/cache/, ~/.kube/cache/), getting cache hygiene AND one discoverable place. So everything goes under ~/.omnigraph/: config.yaml, credentials (dotenv, 0600), cache/, state/. Lower cognitive load, matches what DB/cloud-CLI users expect, matches Helix. OMNIGRAPH_HOME overrides; $XDG_CONFIG_HOME optionally honored but ~/.omnigraph/ is canonical. Updated all paths, the rationale paragraph, the file-naming table (added a cache/state row), and env precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile RFC-002 with shipped/planned CLI tickets Align with reality found in existing tickets: - Noun is graph/graphs, not target/targets (MR-603 done renamed the config key targets->graphs, flag --graph). Use graphs:/--graph; an entry is embedded (uri) XOR remote (server + remote graph name). - ~/.omnigraph/ confirmed by MR-581 (og template pull, done) which already quick-starts templates there. - Templates already exist (MR-581/MR-531) — not invented here. - The init family is already specced (init, quickstart MR-973, serve MR-970, prune MR-972, mcp install MR-974, agent-mode MR-981); this RFC only adds the user route (~/.omnigraph/config.yaml + login). - aliases: -> operations: planned (MR-839). - bearer_token_env gap tracked in MR-971. - query lint/check already exist (MR-639) — registry validator must not collide with the singular `query check`. Add a Reconciliation section; fix the canonical example to graphs:/--graph. Also: merge semantics refined (deep-merge settings, replace named entries, replace lists, config view --resolved --show-origin). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: correct stale-ticket claims and fold init/bootstrap design into RFC-002 Verify against code, not ticket statuses (MR-581 is marked done but is stale/unbuilt): no ~/.omnigraph usage, no template/serve/quickstart/ prune/login commands exist; config still uses aliases: (no operations:). So ~/.omnigraph/ stands on peer-convention merits alone, and templates are a design question, not a foothold. Add §7.5: the three-tier init model (user route = login + ~/.omnigraph/config.yaml; thin project init; fat quickstart + templates) with first-principles positions (split init/login, in-place refuse-if-exists, interactive vs --auto/agent-mode, --template flag, secrets-on-scaffold gitignore rule). This RFC owns only the user route; the rest are sibling tickets (MR-973/970/972/974/981). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: breadboard + slice Shape A in RFC-002 Add the implementation breadboard (places P1-P5, affordances N1-N14 with NEW markers, mermaid) and five vertical slices for the selected config/ CLI/init shape: V1 global layer + merge engine + config view; V2 remote graphs + HTTP-client path + credential resolution; V3 omnigraph login; V4 init-hardening + quickstart + templates (rides MR-970); V5 agent-mode (MR-981). Rollout reordered to the slice sequence; spikes X1-X4 gate their owning slice. V1-V2 close the substantive client->server gap. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add InvokeQuery Cedar action (coarse, graph-scoped) A per-graph, branch-scoped action that gates invoking a server-side stored query by name. Coarse for now: an `invoke_query` allow rule permits any stored query on the graph; a future, additive refinement adds an optional per-query-name scope without changing rules written against the coarse action. Enforcement is at the HTTP boundary; the engine `_as` writers still enforce read/change per the query body, so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). No call site yet — the invocation handler wires it in a later change (same pattern as Admin/GraphList added ahead of consumers). - variant + as_str/resource_kind(Graph)/FromStr/uses_branch_scope - Cedar schema: invoke_query appliesTo Graph - tests: per-graph allow/deny, branch-scope accepted Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Load and type-check stored queries at server boot, refusing breakage At startup the server now loads each graph's stored-query registry, type-checks every query against that graph's live schema, and refuses to boot if any query references a type/property the schema doesn't have (same posture as bad policy YAML) — so schema drift surfaces at the deploy boundary, not silently at invocation. Non-blocking warnings are logged. The validated registry is attached to the GraphHandle (the two production sites previously held `queries: None`). Loading (parse + key==symbol identity) happens at settings-build time where the config is in scope; the schema type-check happens after each engine opens (single mode in `open_single_with_queries`, multi mode in `open_single_graph`). `open_with_bearer_tokens_and_policy` delegates with an empty registry so its 18 test callers are unchanged; the public `new_*` constructors are unchanged (only the private build path threads the registry). - ServerConfigMode::Single / GraphStartupConfig carry the loaded registry - boot tests: valid registry boots; type-broken query refuses boot + names it Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add `omnigraph queries validate` and `queries list` CLI `queries validate` type-checks the stored-query registry against the live schema offline — it opens the selected graph, runs the same check() the server runs at boot, prints breakages/warnings (human or --json), and exits non-zero on any breakage — so an operator can catch a query broken by a schema change without restarting the server. `queries list` prints each registered query's name, MCP exposure, and typed params. Named `validate` (not `check`) to avoid overlap with the existing `omnigraph lint` — `query check`/`query lint` are already deprecated argv-shims to `lint`. Registry entries resolve like the server: a named graph uses its per-graph `queries:`; otherwise the top-level one. - Queries subcommand group; reuses QueryRegistry::load + check from omnigraph-server; local-only (needs the schema), mirrors lint - tests: clean registry exits 0, broken query exits non-zero + names it, list shows the query and its typed params Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Route registry selection through one shared query_entries_for The "which queries: block applies for graph X" rule existed twice — the server boot path and the CLI's registry_entries — and had already drifted: the CLI carried an unreachable unwrap_or_else fallback the server lacked. Add OmnigraphConfig::query_entries_for(graph: Option<&str>) as the single definition (named graph -> its per-graph block; otherwise top-level) and route all three sites through it: server single mode, server multi-graph loop, and the CLI. The CLI's dead fallback arm is deleted; CLI and server now resolve identically by construction. No behavior change. Extends the config round-trip test to pin the selector, including the unknown-name -> top-level fallback the deleted CLI arm covered. * Funnel registry validation through one validate_and_attach gate The check -> refuse-on-breakage -> log-warnings -> empty->None block was copy-pasted across both open paths (single mode and the multi-graph per-graph open), differing only by the graph label. A third opener could attach a registry that was never schema-checked. Extract validate_and_attach(queries, catalog, label) -> Option<Arc<..>> as the single gate both paths call, so attaching an unchecked registry is no longer expressible. The catalog handle is an owned Arc, so calling it before the multi-mode policy match (which rebinds db) is borrow-clean. No behavior change. Adds a direct unit test of the helper (empty / clean / breakage incl. the graph label in the message) — covering the multi-graph path's logic, which previously had no boot-refusal coverage. * Resolve param types structurally in the MCP vector lint The exposed-query advisory detected vector params with type_name.starts_with("Vector(") — a second copy of the compiler's own ScalarType::from_str_name vector parsing that could drift from it. Key the lint off PropType::from_param_type_name + ScalarType::Vector(_) instead, the one canonical resolver the type system already uses. Any future param-suppliability lint now reads the structured type rather than scanning the surface string. Behavior-preserving: the grammar forbids list-of-vector params (list_type = "[" base_type "]", and base_type excludes Vector), so the only input where the structured and string checks could differ is unparseable. Adds a guard test that an exposed String param does not false-trigger the warning. * Refuse duplicate MCP tool names across exposed stored queries The effective MCP tool name (explicit tool_name, else the query name) is a second identity namespace beside the registry key, but nothing enforced it unique — two exposed queries could claim one catalog key, and each consumer re-derived the name ad hoc. Add StoredQuery::effective_tool_name() as the one definition, and a load-time uniqueness pass in from_specs over exposed queries: a collision is a collected LoadError naming the loser and the winner. Scoped to exposed queries (unexposed have no MCP tool); deterministic over the BTreeMap so the first-declared wins and the error order is stable. New (rare) refusal: a config with colliding exposed tool names now fails `omnigraph queries validate` offline and refuses server boot, the same posture as a malformed registry. Release-note-worthy. Test-first: duplicate_exposed_tool_name_is_a_load_error (red before the pass, green after) + a CLI offline test; the unexposed sibling pins the exposed-only scope; effective_tool_name asserts folded into the load test. * docs: document the queries registry, CLI, and invoke_query action The stored-query surface shipped without user docs. Add it, per the same-PR maintenance contract: - policy.md: invoke_query as per-graph action #10 (branch-scoped), with the double-gating note; renumber graph_list; add it to the branch_scope list. - cli-reference.md: the `queries validate | list` command, and the `queries:` config block (per-graph + top-level) with mcp.expose/tool_name and the tool-name uniqueness rule. - server.md: boot-time stored-query type-check (refuse on breakage), noting invocation over HTTP/MCP is not yet exposed. * Add POST /queries/{name} stored-query invocation handler Invoke a curated server-side stored query by name: source + name come from the per-graph queries: registry, the client sends only runtime inputs (params, branch, snapshot). Gated by the invoke_query Cedar action at the boundary; the handler delegates to the existing run_query/run_mutate, whose inner Read/Change enforce still runs — so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). - InvokeStoredQueryRequest + an untagged InvokeStoredQueryResponse { Read(ReadOutput), Change(ChangeOutput) } → one Json<_> return type and a oneOf 200 schema (a correct contract, not a wrong-but-simple one). - Route lives in per_graph_protected → single-mode /queries/{name} and multi-mode /graphs/{id}/queries/{name} for free. - Deny == unknown: an invoke_query denial and a missing query both return the same 404, so the catalog can't be probed by an unauthorized caller. - OpenAPI regenerated; tests cover read, mutation double-gate (403 vs 200), bad-param 400, and the identical-404 deny path. Completes the MR-969 V1 invocation slice (registry + /queries/{name} + invoke_query). * docs: stored-query invocation endpoint; flip the not-yet-exposed caveat Now that POST /queries/{name} ships (C7), document it: add the endpoint to server.md's inventory + an invocation section (body, untagged read/mutate envelope, invoke_query gate, double-gated mutations, deny == 404), and flip the startup note that said invocation was not yet exposed. In policy.md, replace "no invocation call site yet" on the invoke_query action with a pointer to the endpoint. * Scope the stored-query 404-hiding claim to non-invoke_query callers Review found the deny==404 catalog-hiding was overstated as a contract: it holds only at the outer invoke_query gate. A caller that HOLDS invoke_query but lacks read/change gets the inner gate's 403 for an existing query vs 404 for an unknown one — so existence is visible to grant-holders by design (the intended double-gate). The handler docstring, OpenAPI 404 description, and server.md all claimed the 404 was airtight against any denied actor. Correct the wording in all three (no behavior change) and add the missing symmetric test (invoke_query but no read -> 403 for an existing query, 404 for unknown) so the actual contract is pinned. Also document that in default-deny mode (tokens, no policy) every invocation 404s until an invoke_query rule is configured. Nits: the from_specs collision comment said "first declared wins" but it is lexicographically-first by name (BTreeMap); the effective_tool_name docstring overclaimed the CLI display routes through it (it resolves the rule on its own output DTO). * Default mcp.expose to true (the manifest entry is the opt-in) expose controls MCP-catalog membership only — it is not an authorization gate (invocation is gated by invoke_query regardless). So requiring a per-query mcp.expose: true was friction with no safety benefit: a non-exposed query is still HTTP-invocable by name. Flip the default so declaring a query in the manifest exposes it to the agent tool catalog by default; expose: false is the escape hatch for service-only queries. Both the absent-mcp path (Default impl) and the present-but-no-expose path (serde default fn) now yield true. Doc comments + cli-reference updated; the config round-trip test asserts the new default. * Add GET /queries stored-query catalog endpoint List a graph's mcp.expose stored queries as a typed tool catalog so a client (the MCP server) can register them as tools without fetching .gq source. Each entry carries name, MCP tool_name, description/instruction, a read/mutate flag, and decomposed typed params (kind enum: string|bool|int| bigint|float|date|datetime|blob|vector|list, plus item_kind for lists and vector_dim) — so the consumer builds an input schema with a closed match and never re-parses omnigraph type spelling. I64/U64 are bigint (string on the wire): a JSON number loses precision past 2^53 and the engine already accepts decimal strings. Read-gated (works in default-deny; the catalog is graph-wide, authorized against main). NOT Cedar-filtered per query yet — a reader can list a query whose invoke_query they lack (documented gap until per-query authz lands); invocation stays invoke_query-gated + deny==404. - api: QueriesCatalogOutput / QueryCatalogEntry / ParamDescriptor / ParamKind + query_catalog_entry (reuses PropType::from_param_type_name; scalar_kind is exhaustive, so a new ScalarType is a compile error here until catalogued). - GET /queries route in per_graph_protected (→ /graphs/{id}/queries in multi mode); OpenAPI regenerated; path allowlists updated. - Tests: projection unit (every kind, list, vector, nullable, mutation, empty) + handler (exposed-only filter, read-gate probe-oracle, empty registry). * docs: GET /queries stored-query catalog endpoint Document the catalog: the endpoint table row (GET /queries, read-gated), a catalog section (typed-param kind enum, bigint/date/datetime/blob-as-string, graph-wide/branch-independent, mcp.expose default true, the read-gated probe-oracle gap), and flip the startup note now that the catalog ships. * Collect file-I/O and parse errors in QueryRegistry::load in one pass load() early-returned on any unreadable .gq file, masking parse / identity / tool-name-collision errors in the OTHER (readable) files — so an operator fixed the missing file, restarted, and only then saw the next broken query. Now it collects I/O errors but still runs from_specs on the readable specs and returns the union, so every broken entry surfaces at once (matching the collected-errors contract the rest of the registry already follows). Safe: from_specs' tool-name collision check runs over loaded queries only, so dropping an I/O-failed entry can only under-report a collision, never invent one. I/O errors are ordered first (BTreeMap key order), then spec errors. Adds a load-level test (tempdir: a valid, a missing, and a parse-broken .gq) asserting all three surface in one Err — confirmed red before the fix. * Make invoke_query graph-scoped (one branch authority) invoke_query gates reaching the curated stored-query surface — a graph-level capability. Per-branch/snapshot access is already enforced by the inner read/change gate in run_query/run_mutate (authorized against the resolved branch), so branch-scoping the outer gate was redundant AND wrong for snapshot reads (it defaulted to main). Drop the branch dimension: remove InvokeQuery from uses_branch_scope (it joins admin as graph-scoped) and authorize the boundary gate with branch: None. Lossless: an actor confined to branch X by their read/change rules can still only invoke a stored query that touches X. A rule that sets branch_scope on invoke_query is now rejected by validate() — write invoke_query in its own rule. Ripple (atomic): restructure the server invoke fixture so invoke_query sits in its own branch_scope-free rule; invert invoke_query_is_branch_scoped -> invoke_query_rejects_branch_scope; the per-graph authorize test uses branch: None; docs (policy.md, server.md, the InvokeQuery doc). No wire/OpenAPI change. * Resolve graph config by identity, not server mode Which policy/queries block applies for a graph was decided three different, mode-dependent ways: single-mode boot used top-level even for a named graph; multi-mode used per-graph (and silently ignored a top-level queries block); the CLI used per-graph for a named target. So `queries validate --target prod` could check a different registry than the single-mode server loaded, and a named graph's per-graph policy/queries were silently shadowed. Make config a function of graph IDENTITY: a graph served by NAME (--target/server.graph, a graphs: entry) uses its own graphs.<name>.{policy, queries}; a bare URI is anonymous and uses top-level. One rule, applied by single-mode boot, multi-mode boot, and the CLI — so they can't diverge and the CLI predicts the server exactly. No silent ignore: serving a named graph while a top-level policy/queries block is populated now refuses boot, naming the block (the multi-mode top-level-policy bail, extended to queries and to single-mode-named). The CLI's `queries validate` derives the schema URI and the registry from ONE selection, and a positional URI forces anonymous (ignoring cli.graph) so the two can't come from different graphs. BREAKING (released behavior): single mode by name (--target/server.graph) with top-level policy/queries previously used top-level; it now uses the per-graph block and refuses boot if top-level is also populated. Bare-URI single mode is unchanged. Loud, with migration text pointing at graphs.<name>. - config: resolve_policy_file_for (policy sibling of query_entries_for, no top-level fallback) + populated_top_level_blocks for the coherence check. - characterization tests (single-mode named -> per-graph; named + top-level -> bail; multi-mode top-level queries -> bail; CLI positional-URI -> top-level). - docs: policy.md, server.md, cli-reference.md. * docs: RFC-002 credentials keyed by server name (keychain/profile/env) Reworks the RFC's credentials model: secrets are keyed by server name — OS keychain `omnigraph:<server>` (preferred) -> a `[<server>]` profile in `~/.omnigraph/credentials` -> `OMNIGRAPH_TOKEN[_<SERVER>]` env (CI), the AWS/gh/kube model. `servers.<name>` is endpoint-only by default but may carry an explicit, secret-free `auth: { token: { env|file|command|keychain } }` source. The shipped `bearer_token_env` + `.env.omni` dotenv remain a legacy compat path; no `credentials.yaml`. * docs: RFC-002 — typed graph locator (storage/server/graph_id), not a uri string Add §1.1: the resolved graph address is a typed GraphLocator (Embedded{storage} | Remote{server, graph_id}), not a flat uri: String. Diagnoses the string model's cost in the code today (~16 is_remote_uri forks, TargetConfig can't express multi-server x multi-graph, the CLI bails on remote, the ts SDK models baseUrl+graphId separately) and settles the YAML naming so the key names the locus: - storage: (embedded) — shipped uri: is a deprecated alias - server: + graph_id: (remote) — graph_id defaults to the entry key - storage xor server, reject both/neither (no silent ambiguity) Kills the graphs:/graph: collision and the uri:-might-be-a-server ambiguity. Updates the §1/§8 examples and the entry-shape notes to the new naming. * Test: queries list must reject an unknown --target queries list opens no graph URI, so unknown-graph validation does not ride along on resolve_target_uri the way it does for every other command. The new test reproduces the gap: with an unknown --target the command currently exits 0 and prints the (empty) top-level registry instead of erroring like the URI-resolving commands do. Fails against current code; the fix follows. * Validate the graph selection in queries list Graph-existence validation was a side effect of URI resolution: every URI-resolving command rejects an unknown --target via resolve_target_uri, but queries list opens no URI, so query_entries_for(Some(unknown)) silently fell back to the top-level registry and showed the wrong (or empty) catalog. Make membership a property of the selection: add the fallible resolve_graph_selection alongside the infallible query_entries_for (a known name passes through, an unknown name errors with the same message as resolve_target_uri, None stays anonymous), and validate the selection in execute_queries_list. query_entries_for is unchanged — server boot's bare-URI path still needs its None -> top-level arm. * Surface policy-engine errors from stored-query invoke The invoke handler mapped every authorize_request failure to 404 ('stored query not found'), which collapsed the authorization decision (deny -> 403) together with operational failures (no actor -> 401, Cedar evaluation error -> 500). A real policy-engine 500 was hidden as a missing query. Separate the two concerns instead of sniffing the masked status. Extract authorize() returning an Authz { Allowed, Denied(msg) } decision and reserve Err for operational failures only; authorize_request becomes a thin wrapper that maps Denied -> 403, so the 16 deny-as-403 callers are unchanged. The invoke handler now matches the decision directly: a denial stays 404 (deny == missing, so the catalog can't be probed without the grant), while a 401/500 propagates with its true status. 500 is now a reachable outcome on POST /queries/{name}; document it in the endpoint responses and regenerate openapi.json. * Extract the named-graph/top-level coherence rule into one helper The rule 'a named graph uses its own graphs.<name> block, so a populated top-level block is a config error' lived inline in single-mode server boot. Extract it to OmnigraphConfig::ensure_top_level_blocks_honored so the same definition can be shared by the CLI selection gate (next commit) and the two can't drift. Boot calls the helper; the message is reworded context-neutral (drops 'serving') so it reads correctly from both boot and the CLI. Behavior-preserving: multi-graph mode keeps its own unconditional check, and single_mode_named_graph_rejects_top_level_blocks still passes. * Test: queries validate/list must reject a named graph with a top-level block Server boot refuses a config where a graph is selected by name yet a top-level queries:/policy.file block is populated (the block would be silently ignored). The CLI's queries validate/list resolve the same named selection but skip that coherence check, so they give a false green / list the per-graph block. The new test reproduces it: validate prints OK and list succeeds where boot would refuse. Fails against current code; the fix follows. * Enforce top-level coherence in the single CLI selection gate queries validate validated graph membership only as a side effect of URI resolution and queries list only via resolve_graph_selection's membership check; neither applied the named-graph/top-level coherence rule server boot enforces, so both gave a false green on a config boot refuses. Fold ensure_top_level_blocks_honored into resolve_graph_selection so it is the single gate that returns only valid + server-coherent selections, and route resolve_selected_graph (queries validate) through it; queries list already calls the gate. A named graph with a populated top-level block now errors in both commands, matching boot. A positional URI stays anonymous (top-level honored), so queries_validate_positional_uri_ignores_default_graph is unaffected. * docs: RFC-003 — MCP server surface for omnigraph-server Detailed MCP-transport design for the stored-query/MCP work, building on the shipped #128 registry. Corrects the draft against the branch head: the coarse invoke_query gate + 404 denial-masking are already wired (server_invoke_query), so per-query invoke_query scope (PolicyRequest has no query-name dimension yet) is the real prerequisite; positions the doc as superseding rfc-001's MCP transport (/mcp/tools+/mcp/invoke) and reconciles the shipped mcp.expose YAML form and the schema-introspection non-goal; grounds the parity surface in the actual omnigraph-ts package (13 tools with read/change ids, 2 resources). * docs(config): clarify graph config boundaries * fix(config): enforce graph-scoped policies and query validation * fix(cli): require graph selection for scoped query registries * fix(server): preserve named graph id in single mode policy * fix(cli): share graph identity for policy resolution * test(cli): cover policy tooling server graph selection * fix(cli): honor server graph for policy tooling --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-01 22:50:31 +02:00
## 10. Tool catalog + Cedar mapping — `Reuses` `PolicyAction`
Stored-query registry foundation + config/CLI RFC-002 (#128) * MR-969: add stored-query registry config surface Introduce the `queries:` block in omnigraph.yaml — an inline `name -> entry` map of stored queries, per-graph (`graphs.<id>.queries`) and top-level for single-graph mode, mirroring how `policy` is wired in both modes. Each entry points at a `.gq` file and carries optional MCP exposure settings (`expose`, `tool_name`), defaulting to not-exposed. Additive: absent `queries:` leaves current behavior unchanged. - QueryEntry { file, mcp: McpSettings { expose, tool_name } } - `queries` field on TargetConfig + OmnigraphConfig (serde default) - query_entries() / target_query_entries() accessors - resolve_query_file() — base_dir-relative `.gq` path resolution - round-trip + absent-block tests Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add stored-query registry loader and GraphHandle wiring Add a `queries` module: QueryRegistry loads each declared `.gq` entry, parses it, and selects the query whose symbol matches the manifest key, asserting the two agree (key == `query <name>` symbol). Identity is the query name; a key/symbol mismatch is a load-time error. Errors are collected, not fail-fast, so a bad registry surfaces every broken entry at once. Schema type-checking is deliberately left to a separate pass so the loader stays callable without an open engine. Thread an `Option<Arc<QueryRegistry>>` through GraphHandle alongside the per-graph policy; the URI-canonicalizing clone propagates it. Production openers default to None for now — the boot path loads and attaches the registry in a later change. - QueryRegistry::{from_specs, load, lookup, iter}; StoredQuery::is_mutation - GraphHandle.queries field, propagated on canonical clone - registry unit tests: identity match/mismatch, multi-query selection, per-entry parse errors, error collection, mutation classification Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: add RFC-002 config & CLI architecture Layered config (user-global ~/.config/omnigraph/ + per-project), a unifying `target` abstraction resolving to (locus, graph, sub-state, credential) with embedded-URI XOR remote-server loci, multi-server × multi-graph client targeting, credentials by-reference, and the file-naming decision: project and server config are one artifact (`omnigraph.yaml`); the only differently-named file is the user-global `config.yaml`, split by scope not role. Includes the 12-factor bind portability rule (prefer --bind/OMNIGRAPH_BIND over a committed server.bind) and the defined-locally / invoked-remotely model for stored queries. Derived from first principles working backwards from what the engine enables; validated against kube/Helix/git/compose. Linked from docs/dev/index.md. Proposed; phased rollout for the MR-973/974/981 family. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add check() to validate stored queries against the live schema A pure check(registry, catalog) that type-checks every stored query via the same typecheck_query_decl the engine runs for inline queries — no parallel implementation. Failures are collected, not fail-fast, so an operator sees every broken query (e.g. a type/property a migration renamed or removed) in one pass. Breakages are fatal (the boot path will refuse to start); warnings are advisory. Pure over (registry, catalog) so it is callable both at boot (engine catalog) and offline from the CLI without an open engine. Advisory lint: an mcp.expose:true query that declares a Vector(N) parameter warns — an LLM cannot supply a raw embedding vector; such a query should take a String parameter and embed server-side. Warns rather than rejects, since service-to-service callers may pass vectors. - CheckReport { breakages, warnings }; has_breakages / is_clean - tests: valid query, unknown type, unknown property, collect-not-fail-fast, vector-param-exposed warns, unexposed silent Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Drop internal plan-label refs from stored-query config comments Doc comments referenced sequencing labels ("C2") that mean nothing to a reader; reword to describe the behavior directly. Comment-only. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile aliases with the role model in RFC-002 Place the existing client-only `aliases:` block in the client/server role split: aliases are client-role (CLI, embedded, ungated) and may live in both user-global and project config; `queries:` is server-role (deployment manifest only). They overlap as "name -> .gq"; `queries:` is the superset, and the end-state subsumes aliases (definition -> queries, target/branch/format -> client invocation context, positional args -> CLI sugar). v1 keeps aliases unchanged. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: make RFC-002 config global-first, project-optional The global user config is the primary, self-sufficient default; the CLI works from any directory with no project file (the kubectl/aws/gh posture), a deliberate flip from today's project-anchored behavior. The project omnigraph.yaml becomes an optional repo-scoped override and the deployment manifest. Uniform schema, both layers optional; global can hold any section including a personal server's graphs/queries. Additive: project still overrides global; the flip adds a fallback layer below the project file rather than removing it. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: justify XDG ~/.config/omnigraph over legacy ~/.omnigraph in RFC-002 Make the rationale explicit: XDG-first because OmniGraph is a client that will cache remote catalogs and keep session state alongside secrets, and XDG separates config / cache / state into distinct dirs (clear cache without touching creds; backups skip cache) whereas a single ~/.omnigraph/ mixes them. Honor ~/.omnigraph/ as a fallback for the peer-group (aws/kube/docker/helix) expectation. Add XDG_CACHE_HOME / XDG_STATE_HOME to the override precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: build RFC-002 credentials on the existing env-file mechanism OmniGraph already has credentials-by-reference: bearer_token_env names the env var, and auth.env_file is a git-ignored dotenv the CLI auto-loads (real env vars win), resolved via resolve_remote_bearer_token. The RFC's proposed credentials.yaml + token_env were redundant parallel inventions. Reconcile: reuse bearer_token_env (extend to servers.<name>) and auth.env_file (add a global ~/.config/omnigraph/.env layered under the project .env.omni); OS keychain is an additive future resolver. No new credentials.yaml. Updated summary, non-goals, background, file-naming, credentials, example, login, migration, rollout. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: use single ~/.omnigraph dir (Helix-style), not XDG, in RFC-002 Reverse the earlier XDG-first call. The prior argument rested on a false dichotomy (single-dir => mixed config/cache/state); in fact the peer tools (aws, kube, helix) achieve separation via SUBDIRECTORIES inside one ~/.tool/ dir (~/.aws/sso/cache/, ~/.kube/cache/), getting cache hygiene AND one discoverable place. So everything goes under ~/.omnigraph/: config.yaml, credentials (dotenv, 0600), cache/, state/. Lower cognitive load, matches what DB/cloud-CLI users expect, matches Helix. OMNIGRAPH_HOME overrides; $XDG_CONFIG_HOME optionally honored but ~/.omnigraph/ is canonical. Updated all paths, the rationale paragraph, the file-naming table (added a cache/state row), and env precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile RFC-002 with shipped/planned CLI tickets Align with reality found in existing tickets: - Noun is graph/graphs, not target/targets (MR-603 done renamed the config key targets->graphs, flag --graph). Use graphs:/--graph; an entry is embedded (uri) XOR remote (server + remote graph name). - ~/.omnigraph/ confirmed by MR-581 (og template pull, done) which already quick-starts templates there. - Templates already exist (MR-581/MR-531) — not invented here. - The init family is already specced (init, quickstart MR-973, serve MR-970, prune MR-972, mcp install MR-974, agent-mode MR-981); this RFC only adds the user route (~/.omnigraph/config.yaml + login). - aliases: -> operations: planned (MR-839). - bearer_token_env gap tracked in MR-971. - query lint/check already exist (MR-639) — registry validator must not collide with the singular `query check`. Add a Reconciliation section; fix the canonical example to graphs:/--graph. Also: merge semantics refined (deep-merge settings, replace named entries, replace lists, config view --resolved --show-origin). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: correct stale-ticket claims and fold init/bootstrap design into RFC-002 Verify against code, not ticket statuses (MR-581 is marked done but is stale/unbuilt): no ~/.omnigraph usage, no template/serve/quickstart/ prune/login commands exist; config still uses aliases: (no operations:). So ~/.omnigraph/ stands on peer-convention merits alone, and templates are a design question, not a foothold. Add §7.5: the three-tier init model (user route = login + ~/.omnigraph/config.yaml; thin project init; fat quickstart + templates) with first-principles positions (split init/login, in-place refuse-if-exists, interactive vs --auto/agent-mode, --template flag, secrets-on-scaffold gitignore rule). This RFC owns only the user route; the rest are sibling tickets (MR-973/970/972/974/981). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: breadboard + slice Shape A in RFC-002 Add the implementation breadboard (places P1-P5, affordances N1-N14 with NEW markers, mermaid) and five vertical slices for the selected config/ CLI/init shape: V1 global layer + merge engine + config view; V2 remote graphs + HTTP-client path + credential resolution; V3 omnigraph login; V4 init-hardening + quickstart + templates (rides MR-970); V5 agent-mode (MR-981). Rollout reordered to the slice sequence; spikes X1-X4 gate their owning slice. V1-V2 close the substantive client->server gap. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add InvokeQuery Cedar action (coarse, graph-scoped) A per-graph, branch-scoped action that gates invoking a server-side stored query by name. Coarse for now: an `invoke_query` allow rule permits any stored query on the graph; a future, additive refinement adds an optional per-query-name scope without changing rules written against the coarse action. Enforcement is at the HTTP boundary; the engine `_as` writers still enforce read/change per the query body, so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). No call site yet — the invocation handler wires it in a later change (same pattern as Admin/GraphList added ahead of consumers). - variant + as_str/resource_kind(Graph)/FromStr/uses_branch_scope - Cedar schema: invoke_query appliesTo Graph - tests: per-graph allow/deny, branch-scope accepted Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Load and type-check stored queries at server boot, refusing breakage At startup the server now loads each graph's stored-query registry, type-checks every query against that graph's live schema, and refuses to boot if any query references a type/property the schema doesn't have (same posture as bad policy YAML) — so schema drift surfaces at the deploy boundary, not silently at invocation. Non-blocking warnings are logged. The validated registry is attached to the GraphHandle (the two production sites previously held `queries: None`). Loading (parse + key==symbol identity) happens at settings-build time where the config is in scope; the schema type-check happens after each engine opens (single mode in `open_single_with_queries`, multi mode in `open_single_graph`). `open_with_bearer_tokens_and_policy` delegates with an empty registry so its 18 test callers are unchanged; the public `new_*` constructors are unchanged (only the private build path threads the registry). - ServerConfigMode::Single / GraphStartupConfig carry the loaded registry - boot tests: valid registry boots; type-broken query refuses boot + names it Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add `omnigraph queries validate` and `queries list` CLI `queries validate` type-checks the stored-query registry against the live schema offline — it opens the selected graph, runs the same check() the server runs at boot, prints breakages/warnings (human or --json), and exits non-zero on any breakage — so an operator can catch a query broken by a schema change without restarting the server. `queries list` prints each registered query's name, MCP exposure, and typed params. Named `validate` (not `check`) to avoid overlap with the existing `omnigraph lint` — `query check`/`query lint` are already deprecated argv-shims to `lint`. Registry entries resolve like the server: a named graph uses its per-graph `queries:`; otherwise the top-level one. - Queries subcommand group; reuses QueryRegistry::load + check from omnigraph-server; local-only (needs the schema), mirrors lint - tests: clean registry exits 0, broken query exits non-zero + names it, list shows the query and its typed params Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Route registry selection through one shared query_entries_for The "which queries: block applies for graph X" rule existed twice — the server boot path and the CLI's registry_entries — and had already drifted: the CLI carried an unreachable unwrap_or_else fallback the server lacked. Add OmnigraphConfig::query_entries_for(graph: Option<&str>) as the single definition (named graph -> its per-graph block; otherwise top-level) and route all three sites through it: server single mode, server multi-graph loop, and the CLI. The CLI's dead fallback arm is deleted; CLI and server now resolve identically by construction. No behavior change. Extends the config round-trip test to pin the selector, including the unknown-name -> top-level fallback the deleted CLI arm covered. * Funnel registry validation through one validate_and_attach gate The check -> refuse-on-breakage -> log-warnings -> empty->None block was copy-pasted across both open paths (single mode and the multi-graph per-graph open), differing only by the graph label. A third opener could attach a registry that was never schema-checked. Extract validate_and_attach(queries, catalog, label) -> Option<Arc<..>> as the single gate both paths call, so attaching an unchecked registry is no longer expressible. The catalog handle is an owned Arc, so calling it before the multi-mode policy match (which rebinds db) is borrow-clean. No behavior change. Adds a direct unit test of the helper (empty / clean / breakage incl. the graph label in the message) — covering the multi-graph path's logic, which previously had no boot-refusal coverage. * Resolve param types structurally in the MCP vector lint The exposed-query advisory detected vector params with type_name.starts_with("Vector(") — a second copy of the compiler's own ScalarType::from_str_name vector parsing that could drift from it. Key the lint off PropType::from_param_type_name + ScalarType::Vector(_) instead, the one canonical resolver the type system already uses. Any future param-suppliability lint now reads the structured type rather than scanning the surface string. Behavior-preserving: the grammar forbids list-of-vector params (list_type = "[" base_type "]", and base_type excludes Vector), so the only input where the structured and string checks could differ is unparseable. Adds a guard test that an exposed String param does not false-trigger the warning. * Refuse duplicate MCP tool names across exposed stored queries The effective MCP tool name (explicit tool_name, else the query name) is a second identity namespace beside the registry key, but nothing enforced it unique — two exposed queries could claim one catalog key, and each consumer re-derived the name ad hoc. Add StoredQuery::effective_tool_name() as the one definition, and a load-time uniqueness pass in from_specs over exposed queries: a collision is a collected LoadError naming the loser and the winner. Scoped to exposed queries (unexposed have no MCP tool); deterministic over the BTreeMap so the first-declared wins and the error order is stable. New (rare) refusal: a config with colliding exposed tool names now fails `omnigraph queries validate` offline and refuses server boot, the same posture as a malformed registry. Release-note-worthy. Test-first: duplicate_exposed_tool_name_is_a_load_error (red before the pass, green after) + a CLI offline test; the unexposed sibling pins the exposed-only scope; effective_tool_name asserts folded into the load test. * docs: document the queries registry, CLI, and invoke_query action The stored-query surface shipped without user docs. Add it, per the same-PR maintenance contract: - policy.md: invoke_query as per-graph action #10 (branch-scoped), with the double-gating note; renumber graph_list; add it to the branch_scope list. - cli-reference.md: the `queries validate | list` command, and the `queries:` config block (per-graph + top-level) with mcp.expose/tool_name and the tool-name uniqueness rule. - server.md: boot-time stored-query type-check (refuse on breakage), noting invocation over HTTP/MCP is not yet exposed. * Add POST /queries/{name} stored-query invocation handler Invoke a curated server-side stored query by name: source + name come from the per-graph queries: registry, the client sends only runtime inputs (params, branch, snapshot). Gated by the invoke_query Cedar action at the boundary; the handler delegates to the existing run_query/run_mutate, whose inner Read/Change enforce still runs — so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). - InvokeStoredQueryRequest + an untagged InvokeStoredQueryResponse { Read(ReadOutput), Change(ChangeOutput) } → one Json<_> return type and a oneOf 200 schema (a correct contract, not a wrong-but-simple one). - Route lives in per_graph_protected → single-mode /queries/{name} and multi-mode /graphs/{id}/queries/{name} for free. - Deny == unknown: an invoke_query denial and a missing query both return the same 404, so the catalog can't be probed by an unauthorized caller. - OpenAPI regenerated; tests cover read, mutation double-gate (403 vs 200), bad-param 400, and the identical-404 deny path. Completes the MR-969 V1 invocation slice (registry + /queries/{name} + invoke_query). * docs: stored-query invocation endpoint; flip the not-yet-exposed caveat Now that POST /queries/{name} ships (C7), document it: add the endpoint to server.md's inventory + an invocation section (body, untagged read/mutate envelope, invoke_query gate, double-gated mutations, deny == 404), and flip the startup note that said invocation was not yet exposed. In policy.md, replace "no invocation call site yet" on the invoke_query action with a pointer to the endpoint. * Scope the stored-query 404-hiding claim to non-invoke_query callers Review found the deny==404 catalog-hiding was overstated as a contract: it holds only at the outer invoke_query gate. A caller that HOLDS invoke_query but lacks read/change gets the inner gate's 403 for an existing query vs 404 for an unknown one — so existence is visible to grant-holders by design (the intended double-gate). The handler docstring, OpenAPI 404 description, and server.md all claimed the 404 was airtight against any denied actor. Correct the wording in all three (no behavior change) and add the missing symmetric test (invoke_query but no read -> 403 for an existing query, 404 for unknown) so the actual contract is pinned. Also document that in default-deny mode (tokens, no policy) every invocation 404s until an invoke_query rule is configured. Nits: the from_specs collision comment said "first declared wins" but it is lexicographically-first by name (BTreeMap); the effective_tool_name docstring overclaimed the CLI display routes through it (it resolves the rule on its own output DTO). * Default mcp.expose to true (the manifest entry is the opt-in) expose controls MCP-catalog membership only — it is not an authorization gate (invocation is gated by invoke_query regardless). So requiring a per-query mcp.expose: true was friction with no safety benefit: a non-exposed query is still HTTP-invocable by name. Flip the default so declaring a query in the manifest exposes it to the agent tool catalog by default; expose: false is the escape hatch for service-only queries. Both the absent-mcp path (Default impl) and the present-but-no-expose path (serde default fn) now yield true. Doc comments + cli-reference updated; the config round-trip test asserts the new default. * Add GET /queries stored-query catalog endpoint List a graph's mcp.expose stored queries as a typed tool catalog so a client (the MCP server) can register them as tools without fetching .gq source. Each entry carries name, MCP tool_name, description/instruction, a read/mutate flag, and decomposed typed params (kind enum: string|bool|int| bigint|float|date|datetime|blob|vector|list, plus item_kind for lists and vector_dim) — so the consumer builds an input schema with a closed match and never re-parses omnigraph type spelling. I64/U64 are bigint (string on the wire): a JSON number loses precision past 2^53 and the engine already accepts decimal strings. Read-gated (works in default-deny; the catalog is graph-wide, authorized against main). NOT Cedar-filtered per query yet — a reader can list a query whose invoke_query they lack (documented gap until per-query authz lands); invocation stays invoke_query-gated + deny==404. - api: QueriesCatalogOutput / QueryCatalogEntry / ParamDescriptor / ParamKind + query_catalog_entry (reuses PropType::from_param_type_name; scalar_kind is exhaustive, so a new ScalarType is a compile error here until catalogued). - GET /queries route in per_graph_protected (→ /graphs/{id}/queries in multi mode); OpenAPI regenerated; path allowlists updated. - Tests: projection unit (every kind, list, vector, nullable, mutation, empty) + handler (exposed-only filter, read-gate probe-oracle, empty registry). * docs: GET /queries stored-query catalog endpoint Document the catalog: the endpoint table row (GET /queries, read-gated), a catalog section (typed-param kind enum, bigint/date/datetime/blob-as-string, graph-wide/branch-independent, mcp.expose default true, the read-gated probe-oracle gap), and flip the startup note now that the catalog ships. * Collect file-I/O and parse errors in QueryRegistry::load in one pass load() early-returned on any unreadable .gq file, masking parse / identity / tool-name-collision errors in the OTHER (readable) files — so an operator fixed the missing file, restarted, and only then saw the next broken query. Now it collects I/O errors but still runs from_specs on the readable specs and returns the union, so every broken entry surfaces at once (matching the collected-errors contract the rest of the registry already follows). Safe: from_specs' tool-name collision check runs over loaded queries only, so dropping an I/O-failed entry can only under-report a collision, never invent one. I/O errors are ordered first (BTreeMap key order), then spec errors. Adds a load-level test (tempdir: a valid, a missing, and a parse-broken .gq) asserting all three surface in one Err — confirmed red before the fix. * Make invoke_query graph-scoped (one branch authority) invoke_query gates reaching the curated stored-query surface — a graph-level capability. Per-branch/snapshot access is already enforced by the inner read/change gate in run_query/run_mutate (authorized against the resolved branch), so branch-scoping the outer gate was redundant AND wrong for snapshot reads (it defaulted to main). Drop the branch dimension: remove InvokeQuery from uses_branch_scope (it joins admin as graph-scoped) and authorize the boundary gate with branch: None. Lossless: an actor confined to branch X by their read/change rules can still only invoke a stored query that touches X. A rule that sets branch_scope on invoke_query is now rejected by validate() — write invoke_query in its own rule. Ripple (atomic): restructure the server invoke fixture so invoke_query sits in its own branch_scope-free rule; invert invoke_query_is_branch_scoped -> invoke_query_rejects_branch_scope; the per-graph authorize test uses branch: None; docs (policy.md, server.md, the InvokeQuery doc). No wire/OpenAPI change. * Resolve graph config by identity, not server mode Which policy/queries block applies for a graph was decided three different, mode-dependent ways: single-mode boot used top-level even for a named graph; multi-mode used per-graph (and silently ignored a top-level queries block); the CLI used per-graph for a named target. So `queries validate --target prod` could check a different registry than the single-mode server loaded, and a named graph's per-graph policy/queries were silently shadowed. Make config a function of graph IDENTITY: a graph served by NAME (--target/server.graph, a graphs: entry) uses its own graphs.<name>.{policy, queries}; a bare URI is anonymous and uses top-level. One rule, applied by single-mode boot, multi-mode boot, and the CLI — so they can't diverge and the CLI predicts the server exactly. No silent ignore: serving a named graph while a top-level policy/queries block is populated now refuses boot, naming the block (the multi-mode top-level-policy bail, extended to queries and to single-mode-named). The CLI's `queries validate` derives the schema URI and the registry from ONE selection, and a positional URI forces anonymous (ignoring cli.graph) so the two can't come from different graphs. BREAKING (released behavior): single mode by name (--target/server.graph) with top-level policy/queries previously used top-level; it now uses the per-graph block and refuses boot if top-level is also populated. Bare-URI single mode is unchanged. Loud, with migration text pointing at graphs.<name>. - config: resolve_policy_file_for (policy sibling of query_entries_for, no top-level fallback) + populated_top_level_blocks for the coherence check. - characterization tests (single-mode named -> per-graph; named + top-level -> bail; multi-mode top-level queries -> bail; CLI positional-URI -> top-level). - docs: policy.md, server.md, cli-reference.md. * docs: RFC-002 credentials keyed by server name (keychain/profile/env) Reworks the RFC's credentials model: secrets are keyed by server name — OS keychain `omnigraph:<server>` (preferred) -> a `[<server>]` profile in `~/.omnigraph/credentials` -> `OMNIGRAPH_TOKEN[_<SERVER>]` env (CI), the AWS/gh/kube model. `servers.<name>` is endpoint-only by default but may carry an explicit, secret-free `auth: { token: { env|file|command|keychain } }` source. The shipped `bearer_token_env` + `.env.omni` dotenv remain a legacy compat path; no `credentials.yaml`. * docs: RFC-002 — typed graph locator (storage/server/graph_id), not a uri string Add §1.1: the resolved graph address is a typed GraphLocator (Embedded{storage} | Remote{server, graph_id}), not a flat uri: String. Diagnoses the string model's cost in the code today (~16 is_remote_uri forks, TargetConfig can't express multi-server x multi-graph, the CLI bails on remote, the ts SDK models baseUrl+graphId separately) and settles the YAML naming so the key names the locus: - storage: (embedded) — shipped uri: is a deprecated alias - server: + graph_id: (remote) — graph_id defaults to the entry key - storage xor server, reject both/neither (no silent ambiguity) Kills the graphs:/graph: collision and the uri:-might-be-a-server ambiguity. Updates the §1/§8 examples and the entry-shape notes to the new naming. * Test: queries list must reject an unknown --target queries list opens no graph URI, so unknown-graph validation does not ride along on resolve_target_uri the way it does for every other command. The new test reproduces the gap: with an unknown --target the command currently exits 0 and prints the (empty) top-level registry instead of erroring like the URI-resolving commands do. Fails against current code; the fix follows. * Validate the graph selection in queries list Graph-existence validation was a side effect of URI resolution: every URI-resolving command rejects an unknown --target via resolve_target_uri, but queries list opens no URI, so query_entries_for(Some(unknown)) silently fell back to the top-level registry and showed the wrong (or empty) catalog. Make membership a property of the selection: add the fallible resolve_graph_selection alongside the infallible query_entries_for (a known name passes through, an unknown name errors with the same message as resolve_target_uri, None stays anonymous), and validate the selection in execute_queries_list. query_entries_for is unchanged — server boot's bare-URI path still needs its None -> top-level arm. * Surface policy-engine errors from stored-query invoke The invoke handler mapped every authorize_request failure to 404 ('stored query not found'), which collapsed the authorization decision (deny -> 403) together with operational failures (no actor -> 401, Cedar evaluation error -> 500). A real policy-engine 500 was hidden as a missing query. Separate the two concerns instead of sniffing the masked status. Extract authorize() returning an Authz { Allowed, Denied(msg) } decision and reserve Err for operational failures only; authorize_request becomes a thin wrapper that maps Denied -> 403, so the 16 deny-as-403 callers are unchanged. The invoke handler now matches the decision directly: a denial stays 404 (deny == missing, so the catalog can't be probed without the grant), while a 401/500 propagates with its true status. 500 is now a reachable outcome on POST /queries/{name}; document it in the endpoint responses and regenerate openapi.json. * Extract the named-graph/top-level coherence rule into one helper The rule 'a named graph uses its own graphs.<name> block, so a populated top-level block is a config error' lived inline in single-mode server boot. Extract it to OmnigraphConfig::ensure_top_level_blocks_honored so the same definition can be shared by the CLI selection gate (next commit) and the two can't drift. Boot calls the helper; the message is reworded context-neutral (drops 'serving') so it reads correctly from both boot and the CLI. Behavior-preserving: multi-graph mode keeps its own unconditional check, and single_mode_named_graph_rejects_top_level_blocks still passes. * Test: queries validate/list must reject a named graph with a top-level block Server boot refuses a config where a graph is selected by name yet a top-level queries:/policy.file block is populated (the block would be silently ignored). The CLI's queries validate/list resolve the same named selection but skip that coherence check, so they give a false green / list the per-graph block. The new test reproduces it: validate prints OK and list succeeds where boot would refuse. Fails against current code; the fix follows. * Enforce top-level coherence in the single CLI selection gate queries validate validated graph membership only as a side effect of URI resolution and queries list only via resolve_graph_selection's membership check; neither applied the named-graph/top-level coherence rule server boot enforces, so both gave a false green on a config boot refuses. Fold ensure_top_level_blocks_honored into resolve_graph_selection so it is the single gate that returns only valid + server-coherent selections, and route resolve_selected_graph (queries validate) through it; queries list already calls the gate. A named graph with a populated top-level block now errors in both commands, matching boot. A positional URI stays anonymous (top-level honored), so queries_validate_positional_uri_ignores_default_graph is unaffected. * docs: RFC-003 — MCP server surface for omnigraph-server Detailed MCP-transport design for the stored-query/MCP work, building on the shipped #128 registry. Corrects the draft against the branch head: the coarse invoke_query gate + 404 denial-masking are already wired (server_invoke_query), so per-query invoke_query scope (PolicyRequest has no query-name dimension yet) is the real prerequisite; positions the doc as superseding rfc-001's MCP transport (/mcp/tools+/mcp/invoke) and reconciles the shipped mcp.expose YAML form and the schema-introspection non-goal; grounds the parity surface in the actual omnigraph-ts package (13 tools with read/change ids, 2 resources). * docs(config): clarify graph config boundaries * fix(config): enforce graph-scoped policies and query validation * fix(cli): require graph selection for scoped query registries * fix(server): preserve named graph id in single mode policy * fix(cli): share graph identity for policy resolution * test(cli): cover policy tooling server graph selection * fix(cli): honor server graph for policy tooling --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-01 22:50:31 +02:00
Each built-in reuses the **exact `PolicyAction` its REST route enforces**:
Stored-query registry foundation + config/CLI RFC-002 (#128) * MR-969: add stored-query registry config surface Introduce the `queries:` block in omnigraph.yaml — an inline `name -> entry` map of stored queries, per-graph (`graphs.<id>.queries`) and top-level for single-graph mode, mirroring how `policy` is wired in both modes. Each entry points at a `.gq` file and carries optional MCP exposure settings (`expose`, `tool_name`), defaulting to not-exposed. Additive: absent `queries:` leaves current behavior unchanged. - QueryEntry { file, mcp: McpSettings { expose, tool_name } } - `queries` field on TargetConfig + OmnigraphConfig (serde default) - query_entries() / target_query_entries() accessors - resolve_query_file() — base_dir-relative `.gq` path resolution - round-trip + absent-block tests Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add stored-query registry loader and GraphHandle wiring Add a `queries` module: QueryRegistry loads each declared `.gq` entry, parses it, and selects the query whose symbol matches the manifest key, asserting the two agree (key == `query <name>` symbol). Identity is the query name; a key/symbol mismatch is a load-time error. Errors are collected, not fail-fast, so a bad registry surfaces every broken entry at once. Schema type-checking is deliberately left to a separate pass so the loader stays callable without an open engine. Thread an `Option<Arc<QueryRegistry>>` through GraphHandle alongside the per-graph policy; the URI-canonicalizing clone propagates it. Production openers default to None for now — the boot path loads and attaches the registry in a later change. - QueryRegistry::{from_specs, load, lookup, iter}; StoredQuery::is_mutation - GraphHandle.queries field, propagated on canonical clone - registry unit tests: identity match/mismatch, multi-query selection, per-entry parse errors, error collection, mutation classification Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: add RFC-002 config & CLI architecture Layered config (user-global ~/.config/omnigraph/ + per-project), a unifying `target` abstraction resolving to (locus, graph, sub-state, credential) with embedded-URI XOR remote-server loci, multi-server × multi-graph client targeting, credentials by-reference, and the file-naming decision: project and server config are one artifact (`omnigraph.yaml`); the only differently-named file is the user-global `config.yaml`, split by scope not role. Includes the 12-factor bind portability rule (prefer --bind/OMNIGRAPH_BIND over a committed server.bind) and the defined-locally / invoked-remotely model for stored queries. Derived from first principles working backwards from what the engine enables; validated against kube/Helix/git/compose. Linked from docs/dev/index.md. Proposed; phased rollout for the MR-973/974/981 family. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add check() to validate stored queries against the live schema A pure check(registry, catalog) that type-checks every stored query via the same typecheck_query_decl the engine runs for inline queries — no parallel implementation. Failures are collected, not fail-fast, so an operator sees every broken query (e.g. a type/property a migration renamed or removed) in one pass. Breakages are fatal (the boot path will refuse to start); warnings are advisory. Pure over (registry, catalog) so it is callable both at boot (engine catalog) and offline from the CLI without an open engine. Advisory lint: an mcp.expose:true query that declares a Vector(N) parameter warns — an LLM cannot supply a raw embedding vector; such a query should take a String parameter and embed server-side. Warns rather than rejects, since service-to-service callers may pass vectors. - CheckReport { breakages, warnings }; has_breakages / is_clean - tests: valid query, unknown type, unknown property, collect-not-fail-fast, vector-param-exposed warns, unexposed silent Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Drop internal plan-label refs from stored-query config comments Doc comments referenced sequencing labels ("C2") that mean nothing to a reader; reword to describe the behavior directly. Comment-only. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile aliases with the role model in RFC-002 Place the existing client-only `aliases:` block in the client/server role split: aliases are client-role (CLI, embedded, ungated) and may live in both user-global and project config; `queries:` is server-role (deployment manifest only). They overlap as "name -> .gq"; `queries:` is the superset, and the end-state subsumes aliases (definition -> queries, target/branch/format -> client invocation context, positional args -> CLI sugar). v1 keeps aliases unchanged. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: make RFC-002 config global-first, project-optional The global user config is the primary, self-sufficient default; the CLI works from any directory with no project file (the kubectl/aws/gh posture), a deliberate flip from today's project-anchored behavior. The project omnigraph.yaml becomes an optional repo-scoped override and the deployment manifest. Uniform schema, both layers optional; global can hold any section including a personal server's graphs/queries. Additive: project still overrides global; the flip adds a fallback layer below the project file rather than removing it. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: justify XDG ~/.config/omnigraph over legacy ~/.omnigraph in RFC-002 Make the rationale explicit: XDG-first because OmniGraph is a client that will cache remote catalogs and keep session state alongside secrets, and XDG separates config / cache / state into distinct dirs (clear cache without touching creds; backups skip cache) whereas a single ~/.omnigraph/ mixes them. Honor ~/.omnigraph/ as a fallback for the peer-group (aws/kube/docker/helix) expectation. Add XDG_CACHE_HOME / XDG_STATE_HOME to the override precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: build RFC-002 credentials on the existing env-file mechanism OmniGraph already has credentials-by-reference: bearer_token_env names the env var, and auth.env_file is a git-ignored dotenv the CLI auto-loads (real env vars win), resolved via resolve_remote_bearer_token. The RFC's proposed credentials.yaml + token_env were redundant parallel inventions. Reconcile: reuse bearer_token_env (extend to servers.<name>) and auth.env_file (add a global ~/.config/omnigraph/.env layered under the project .env.omni); OS keychain is an additive future resolver. No new credentials.yaml. Updated summary, non-goals, background, file-naming, credentials, example, login, migration, rollout. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: use single ~/.omnigraph dir (Helix-style), not XDG, in RFC-002 Reverse the earlier XDG-first call. The prior argument rested on a false dichotomy (single-dir => mixed config/cache/state); in fact the peer tools (aws, kube, helix) achieve separation via SUBDIRECTORIES inside one ~/.tool/ dir (~/.aws/sso/cache/, ~/.kube/cache/), getting cache hygiene AND one discoverable place. So everything goes under ~/.omnigraph/: config.yaml, credentials (dotenv, 0600), cache/, state/. Lower cognitive load, matches what DB/cloud-CLI users expect, matches Helix. OMNIGRAPH_HOME overrides; $XDG_CONFIG_HOME optionally honored but ~/.omnigraph/ is canonical. Updated all paths, the rationale paragraph, the file-naming table (added a cache/state row), and env precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile RFC-002 with shipped/planned CLI tickets Align with reality found in existing tickets: - Noun is graph/graphs, not target/targets (MR-603 done renamed the config key targets->graphs, flag --graph). Use graphs:/--graph; an entry is embedded (uri) XOR remote (server + remote graph name). - ~/.omnigraph/ confirmed by MR-581 (og template pull, done) which already quick-starts templates there. - Templates already exist (MR-581/MR-531) — not invented here. - The init family is already specced (init, quickstart MR-973, serve MR-970, prune MR-972, mcp install MR-974, agent-mode MR-981); this RFC only adds the user route (~/.omnigraph/config.yaml + login). - aliases: -> operations: planned (MR-839). - bearer_token_env gap tracked in MR-971. - query lint/check already exist (MR-639) — registry validator must not collide with the singular `query check`. Add a Reconciliation section; fix the canonical example to graphs:/--graph. Also: merge semantics refined (deep-merge settings, replace named entries, replace lists, config view --resolved --show-origin). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: correct stale-ticket claims and fold init/bootstrap design into RFC-002 Verify against code, not ticket statuses (MR-581 is marked done but is stale/unbuilt): no ~/.omnigraph usage, no template/serve/quickstart/ prune/login commands exist; config still uses aliases: (no operations:). So ~/.omnigraph/ stands on peer-convention merits alone, and templates are a design question, not a foothold. Add §7.5: the three-tier init model (user route = login + ~/.omnigraph/config.yaml; thin project init; fat quickstart + templates) with first-principles positions (split init/login, in-place refuse-if-exists, interactive vs --auto/agent-mode, --template flag, secrets-on-scaffold gitignore rule). This RFC owns only the user route; the rest are sibling tickets (MR-973/970/972/974/981). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: breadboard + slice Shape A in RFC-002 Add the implementation breadboard (places P1-P5, affordances N1-N14 with NEW markers, mermaid) and five vertical slices for the selected config/ CLI/init shape: V1 global layer + merge engine + config view; V2 remote graphs + HTTP-client path + credential resolution; V3 omnigraph login; V4 init-hardening + quickstart + templates (rides MR-970); V5 agent-mode (MR-981). Rollout reordered to the slice sequence; spikes X1-X4 gate their owning slice. V1-V2 close the substantive client->server gap. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add InvokeQuery Cedar action (coarse, graph-scoped) A per-graph, branch-scoped action that gates invoking a server-side stored query by name. Coarse for now: an `invoke_query` allow rule permits any stored query on the graph; a future, additive refinement adds an optional per-query-name scope without changing rules written against the coarse action. Enforcement is at the HTTP boundary; the engine `_as` writers still enforce read/change per the query body, so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). No call site yet — the invocation handler wires it in a later change (same pattern as Admin/GraphList added ahead of consumers). - variant + as_str/resource_kind(Graph)/FromStr/uses_branch_scope - Cedar schema: invoke_query appliesTo Graph - tests: per-graph allow/deny, branch-scope accepted Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Load and type-check stored queries at server boot, refusing breakage At startup the server now loads each graph's stored-query registry, type-checks every query against that graph's live schema, and refuses to boot if any query references a type/property the schema doesn't have (same posture as bad policy YAML) — so schema drift surfaces at the deploy boundary, not silently at invocation. Non-blocking warnings are logged. The validated registry is attached to the GraphHandle (the two production sites previously held `queries: None`). Loading (parse + key==symbol identity) happens at settings-build time where the config is in scope; the schema type-check happens after each engine opens (single mode in `open_single_with_queries`, multi mode in `open_single_graph`). `open_with_bearer_tokens_and_policy` delegates with an empty registry so its 18 test callers are unchanged; the public `new_*` constructors are unchanged (only the private build path threads the registry). - ServerConfigMode::Single / GraphStartupConfig carry the loaded registry - boot tests: valid registry boots; type-broken query refuses boot + names it Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add `omnigraph queries validate` and `queries list` CLI `queries validate` type-checks the stored-query registry against the live schema offline — it opens the selected graph, runs the same check() the server runs at boot, prints breakages/warnings (human or --json), and exits non-zero on any breakage — so an operator can catch a query broken by a schema change without restarting the server. `queries list` prints each registered query's name, MCP exposure, and typed params. Named `validate` (not `check`) to avoid overlap with the existing `omnigraph lint` — `query check`/`query lint` are already deprecated argv-shims to `lint`. Registry entries resolve like the server: a named graph uses its per-graph `queries:`; otherwise the top-level one. - Queries subcommand group; reuses QueryRegistry::load + check from omnigraph-server; local-only (needs the schema), mirrors lint - tests: clean registry exits 0, broken query exits non-zero + names it, list shows the query and its typed params Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Route registry selection through one shared query_entries_for The "which queries: block applies for graph X" rule existed twice — the server boot path and the CLI's registry_entries — and had already drifted: the CLI carried an unreachable unwrap_or_else fallback the server lacked. Add OmnigraphConfig::query_entries_for(graph: Option<&str>) as the single definition (named graph -> its per-graph block; otherwise top-level) and route all three sites through it: server single mode, server multi-graph loop, and the CLI. The CLI's dead fallback arm is deleted; CLI and server now resolve identically by construction. No behavior change. Extends the config round-trip test to pin the selector, including the unknown-name -> top-level fallback the deleted CLI arm covered. * Funnel registry validation through one validate_and_attach gate The check -> refuse-on-breakage -> log-warnings -> empty->None block was copy-pasted across both open paths (single mode and the multi-graph per-graph open), differing only by the graph label. A third opener could attach a registry that was never schema-checked. Extract validate_and_attach(queries, catalog, label) -> Option<Arc<..>> as the single gate both paths call, so attaching an unchecked registry is no longer expressible. The catalog handle is an owned Arc, so calling it before the multi-mode policy match (which rebinds db) is borrow-clean. No behavior change. Adds a direct unit test of the helper (empty / clean / breakage incl. the graph label in the message) — covering the multi-graph path's logic, which previously had no boot-refusal coverage. * Resolve param types structurally in the MCP vector lint The exposed-query advisory detected vector params with type_name.starts_with("Vector(") — a second copy of the compiler's own ScalarType::from_str_name vector parsing that could drift from it. Key the lint off PropType::from_param_type_name + ScalarType::Vector(_) instead, the one canonical resolver the type system already uses. Any future param-suppliability lint now reads the structured type rather than scanning the surface string. Behavior-preserving: the grammar forbids list-of-vector params (list_type = "[" base_type "]", and base_type excludes Vector), so the only input where the structured and string checks could differ is unparseable. Adds a guard test that an exposed String param does not false-trigger the warning. * Refuse duplicate MCP tool names across exposed stored queries The effective MCP tool name (explicit tool_name, else the query name) is a second identity namespace beside the registry key, but nothing enforced it unique — two exposed queries could claim one catalog key, and each consumer re-derived the name ad hoc. Add StoredQuery::effective_tool_name() as the one definition, and a load-time uniqueness pass in from_specs over exposed queries: a collision is a collected LoadError naming the loser and the winner. Scoped to exposed queries (unexposed have no MCP tool); deterministic over the BTreeMap so the first-declared wins and the error order is stable. New (rare) refusal: a config with colliding exposed tool names now fails `omnigraph queries validate` offline and refuses server boot, the same posture as a malformed registry. Release-note-worthy. Test-first: duplicate_exposed_tool_name_is_a_load_error (red before the pass, green after) + a CLI offline test; the unexposed sibling pins the exposed-only scope; effective_tool_name asserts folded into the load test. * docs: document the queries registry, CLI, and invoke_query action The stored-query surface shipped without user docs. Add it, per the same-PR maintenance contract: - policy.md: invoke_query as per-graph action #10 (branch-scoped), with the double-gating note; renumber graph_list; add it to the branch_scope list. - cli-reference.md: the `queries validate | list` command, and the `queries:` config block (per-graph + top-level) with mcp.expose/tool_name and the tool-name uniqueness rule. - server.md: boot-time stored-query type-check (refuse on breakage), noting invocation over HTTP/MCP is not yet exposed. * Add POST /queries/{name} stored-query invocation handler Invoke a curated server-side stored query by name: source + name come from the per-graph queries: registry, the client sends only runtime inputs (params, branch, snapshot). Gated by the invoke_query Cedar action at the boundary; the handler delegates to the existing run_query/run_mutate, whose inner Read/Change enforce still runs — so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). - InvokeStoredQueryRequest + an untagged InvokeStoredQueryResponse { Read(ReadOutput), Change(ChangeOutput) } → one Json<_> return type and a oneOf 200 schema (a correct contract, not a wrong-but-simple one). - Route lives in per_graph_protected → single-mode /queries/{name} and multi-mode /graphs/{id}/queries/{name} for free. - Deny == unknown: an invoke_query denial and a missing query both return the same 404, so the catalog can't be probed by an unauthorized caller. - OpenAPI regenerated; tests cover read, mutation double-gate (403 vs 200), bad-param 400, and the identical-404 deny path. Completes the MR-969 V1 invocation slice (registry + /queries/{name} + invoke_query). * docs: stored-query invocation endpoint; flip the not-yet-exposed caveat Now that POST /queries/{name} ships (C7), document it: add the endpoint to server.md's inventory + an invocation section (body, untagged read/mutate envelope, invoke_query gate, double-gated mutations, deny == 404), and flip the startup note that said invocation was not yet exposed. In policy.md, replace "no invocation call site yet" on the invoke_query action with a pointer to the endpoint. * Scope the stored-query 404-hiding claim to non-invoke_query callers Review found the deny==404 catalog-hiding was overstated as a contract: it holds only at the outer invoke_query gate. A caller that HOLDS invoke_query but lacks read/change gets the inner gate's 403 for an existing query vs 404 for an unknown one — so existence is visible to grant-holders by design (the intended double-gate). The handler docstring, OpenAPI 404 description, and server.md all claimed the 404 was airtight against any denied actor. Correct the wording in all three (no behavior change) and add the missing symmetric test (invoke_query but no read -> 403 for an existing query, 404 for unknown) so the actual contract is pinned. Also document that in default-deny mode (tokens, no policy) every invocation 404s until an invoke_query rule is configured. Nits: the from_specs collision comment said "first declared wins" but it is lexicographically-first by name (BTreeMap); the effective_tool_name docstring overclaimed the CLI display routes through it (it resolves the rule on its own output DTO). * Default mcp.expose to true (the manifest entry is the opt-in) expose controls MCP-catalog membership only — it is not an authorization gate (invocation is gated by invoke_query regardless). So requiring a per-query mcp.expose: true was friction with no safety benefit: a non-exposed query is still HTTP-invocable by name. Flip the default so declaring a query in the manifest exposes it to the agent tool catalog by default; expose: false is the escape hatch for service-only queries. Both the absent-mcp path (Default impl) and the present-but-no-expose path (serde default fn) now yield true. Doc comments + cli-reference updated; the config round-trip test asserts the new default. * Add GET /queries stored-query catalog endpoint List a graph's mcp.expose stored queries as a typed tool catalog so a client (the MCP server) can register them as tools without fetching .gq source. Each entry carries name, MCP tool_name, description/instruction, a read/mutate flag, and decomposed typed params (kind enum: string|bool|int| bigint|float|date|datetime|blob|vector|list, plus item_kind for lists and vector_dim) — so the consumer builds an input schema with a closed match and never re-parses omnigraph type spelling. I64/U64 are bigint (string on the wire): a JSON number loses precision past 2^53 and the engine already accepts decimal strings. Read-gated (works in default-deny; the catalog is graph-wide, authorized against main). NOT Cedar-filtered per query yet — a reader can list a query whose invoke_query they lack (documented gap until per-query authz lands); invocation stays invoke_query-gated + deny==404. - api: QueriesCatalogOutput / QueryCatalogEntry / ParamDescriptor / ParamKind + query_catalog_entry (reuses PropType::from_param_type_name; scalar_kind is exhaustive, so a new ScalarType is a compile error here until catalogued). - GET /queries route in per_graph_protected (→ /graphs/{id}/queries in multi mode); OpenAPI regenerated; path allowlists updated. - Tests: projection unit (every kind, list, vector, nullable, mutation, empty) + handler (exposed-only filter, read-gate probe-oracle, empty registry). * docs: GET /queries stored-query catalog endpoint Document the catalog: the endpoint table row (GET /queries, read-gated), a catalog section (typed-param kind enum, bigint/date/datetime/blob-as-string, graph-wide/branch-independent, mcp.expose default true, the read-gated probe-oracle gap), and flip the startup note now that the catalog ships. * Collect file-I/O and parse errors in QueryRegistry::load in one pass load() early-returned on any unreadable .gq file, masking parse / identity / tool-name-collision errors in the OTHER (readable) files — so an operator fixed the missing file, restarted, and only then saw the next broken query. Now it collects I/O errors but still runs from_specs on the readable specs and returns the union, so every broken entry surfaces at once (matching the collected-errors contract the rest of the registry already follows). Safe: from_specs' tool-name collision check runs over loaded queries only, so dropping an I/O-failed entry can only under-report a collision, never invent one. I/O errors are ordered first (BTreeMap key order), then spec errors. Adds a load-level test (tempdir: a valid, a missing, and a parse-broken .gq) asserting all three surface in one Err — confirmed red before the fix. * Make invoke_query graph-scoped (one branch authority) invoke_query gates reaching the curated stored-query surface — a graph-level capability. Per-branch/snapshot access is already enforced by the inner read/change gate in run_query/run_mutate (authorized against the resolved branch), so branch-scoping the outer gate was redundant AND wrong for snapshot reads (it defaulted to main). Drop the branch dimension: remove InvokeQuery from uses_branch_scope (it joins admin as graph-scoped) and authorize the boundary gate with branch: None. Lossless: an actor confined to branch X by their read/change rules can still only invoke a stored query that touches X. A rule that sets branch_scope on invoke_query is now rejected by validate() — write invoke_query in its own rule. Ripple (atomic): restructure the server invoke fixture so invoke_query sits in its own branch_scope-free rule; invert invoke_query_is_branch_scoped -> invoke_query_rejects_branch_scope; the per-graph authorize test uses branch: None; docs (policy.md, server.md, the InvokeQuery doc). No wire/OpenAPI change. * Resolve graph config by identity, not server mode Which policy/queries block applies for a graph was decided three different, mode-dependent ways: single-mode boot used top-level even for a named graph; multi-mode used per-graph (and silently ignored a top-level queries block); the CLI used per-graph for a named target. So `queries validate --target prod` could check a different registry than the single-mode server loaded, and a named graph's per-graph policy/queries were silently shadowed. Make config a function of graph IDENTITY: a graph served by NAME (--target/server.graph, a graphs: entry) uses its own graphs.<name>.{policy, queries}; a bare URI is anonymous and uses top-level. One rule, applied by single-mode boot, multi-mode boot, and the CLI — so they can't diverge and the CLI predicts the server exactly. No silent ignore: serving a named graph while a top-level policy/queries block is populated now refuses boot, naming the block (the multi-mode top-level-policy bail, extended to queries and to single-mode-named). The CLI's `queries validate` derives the schema URI and the registry from ONE selection, and a positional URI forces anonymous (ignoring cli.graph) so the two can't come from different graphs. BREAKING (released behavior): single mode by name (--target/server.graph) with top-level policy/queries previously used top-level; it now uses the per-graph block and refuses boot if top-level is also populated. Bare-URI single mode is unchanged. Loud, with migration text pointing at graphs.<name>. - config: resolve_policy_file_for (policy sibling of query_entries_for, no top-level fallback) + populated_top_level_blocks for the coherence check. - characterization tests (single-mode named -> per-graph; named + top-level -> bail; multi-mode top-level queries -> bail; CLI positional-URI -> top-level). - docs: policy.md, server.md, cli-reference.md. * docs: RFC-002 credentials keyed by server name (keychain/profile/env) Reworks the RFC's credentials model: secrets are keyed by server name — OS keychain `omnigraph:<server>` (preferred) -> a `[<server>]` profile in `~/.omnigraph/credentials` -> `OMNIGRAPH_TOKEN[_<SERVER>]` env (CI), the AWS/gh/kube model. `servers.<name>` is endpoint-only by default but may carry an explicit, secret-free `auth: { token: { env|file|command|keychain } }` source. The shipped `bearer_token_env` + `.env.omni` dotenv remain a legacy compat path; no `credentials.yaml`. * docs: RFC-002 — typed graph locator (storage/server/graph_id), not a uri string Add §1.1: the resolved graph address is a typed GraphLocator (Embedded{storage} | Remote{server, graph_id}), not a flat uri: String. Diagnoses the string model's cost in the code today (~16 is_remote_uri forks, TargetConfig can't express multi-server x multi-graph, the CLI bails on remote, the ts SDK models baseUrl+graphId separately) and settles the YAML naming so the key names the locus: - storage: (embedded) — shipped uri: is a deprecated alias - server: + graph_id: (remote) — graph_id defaults to the entry key - storage xor server, reject both/neither (no silent ambiguity) Kills the graphs:/graph: collision and the uri:-might-be-a-server ambiguity. Updates the §1/§8 examples and the entry-shape notes to the new naming. * Test: queries list must reject an unknown --target queries list opens no graph URI, so unknown-graph validation does not ride along on resolve_target_uri the way it does for every other command. The new test reproduces the gap: with an unknown --target the command currently exits 0 and prints the (empty) top-level registry instead of erroring like the URI-resolving commands do. Fails against current code; the fix follows. * Validate the graph selection in queries list Graph-existence validation was a side effect of URI resolution: every URI-resolving command rejects an unknown --target via resolve_target_uri, but queries list opens no URI, so query_entries_for(Some(unknown)) silently fell back to the top-level registry and showed the wrong (or empty) catalog. Make membership a property of the selection: add the fallible resolve_graph_selection alongside the infallible query_entries_for (a known name passes through, an unknown name errors with the same message as resolve_target_uri, None stays anonymous), and validate the selection in execute_queries_list. query_entries_for is unchanged — server boot's bare-URI path still needs its None -> top-level arm. * Surface policy-engine errors from stored-query invoke The invoke handler mapped every authorize_request failure to 404 ('stored query not found'), which collapsed the authorization decision (deny -> 403) together with operational failures (no actor -> 401, Cedar evaluation error -> 500). A real policy-engine 500 was hidden as a missing query. Separate the two concerns instead of sniffing the masked status. Extract authorize() returning an Authz { Allowed, Denied(msg) } decision and reserve Err for operational failures only; authorize_request becomes a thin wrapper that maps Denied -> 403, so the 16 deny-as-403 callers are unchanged. The invoke handler now matches the decision directly: a denial stays 404 (deny == missing, so the catalog can't be probed without the grant), while a 401/500 propagates with its true status. 500 is now a reachable outcome on POST /queries/{name}; document it in the endpoint responses and regenerate openapi.json. * Extract the named-graph/top-level coherence rule into one helper The rule 'a named graph uses its own graphs.<name> block, so a populated top-level block is a config error' lived inline in single-mode server boot. Extract it to OmnigraphConfig::ensure_top_level_blocks_honored so the same definition can be shared by the CLI selection gate (next commit) and the two can't drift. Boot calls the helper; the message is reworded context-neutral (drops 'serving') so it reads correctly from both boot and the CLI. Behavior-preserving: multi-graph mode keeps its own unconditional check, and single_mode_named_graph_rejects_top_level_blocks still passes. * Test: queries validate/list must reject a named graph with a top-level block Server boot refuses a config where a graph is selected by name yet a top-level queries:/policy.file block is populated (the block would be silently ignored). The CLI's queries validate/list resolve the same named selection but skip that coherence check, so they give a false green / list the per-graph block. The new test reproduces it: validate prints OK and list succeeds where boot would refuse. Fails against current code; the fix follows. * Enforce top-level coherence in the single CLI selection gate queries validate validated graph membership only as a side effect of URI resolution and queries list only via resolve_graph_selection's membership check; neither applied the named-graph/top-level coherence rule server boot enforces, so both gave a false green on a config boot refuses. Fold ensure_top_level_blocks_honored into resolve_graph_selection so it is the single gate that returns only valid + server-coherent selections, and route resolve_selected_graph (queries validate) through it; queries list already calls the gate. A named graph with a populated top-level block now errors in both commands, matching boot. A positional URI stays anonymous (top-level honored), so queries_validate_positional_uri_ignores_default_graph is unaffected. * docs: RFC-003 — MCP server surface for omnigraph-server Detailed MCP-transport design for the stored-query/MCP work, building on the shipped #128 registry. Corrects the draft against the branch head: the coarse invoke_query gate + 404 denial-masking are already wired (server_invoke_query), so per-query invoke_query scope (PolicyRequest has no query-name dimension yet) is the real prerequisite; positions the doc as superseding rfc-001's MCP transport (/mcp/tools+/mcp/invoke) and reconciles the shipped mcp.expose YAML form and the schema-introspection non-goal; grounds the parity surface in the actual omnigraph-ts package (13 tools with read/change ids, 2 resources). * docs(config): clarify graph config boundaries * fix(config): enforce graph-scoped policies and query validation * fix(cli): require graph selection for scoped query registries * fix(server): preserve named graph id in single mode policy * fix(cli): share graph identity for policy resolution * test(cli): cover policy tooling server graph selection * fix(cli): honor server graph for policy tooling --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-01 22:50:31 +02:00
```rust
// Reuses — crates/omnigraph-policy/src/lib.rs:16
pub enum PolicyAction {
Read, Export, Change, SchemaApply,
BranchCreate, BranchDelete, BranchMerge,
Admin, // reserved, no call site yet
GraphList, // server-scoped (resource_kind == Server)
InvokeQuery, // graph-scoped, coarse (no per-query dimension yet)
}
```
Stored-query registry foundation + config/CLI RFC-002 (#128) * MR-969: add stored-query registry config surface Introduce the `queries:` block in omnigraph.yaml — an inline `name -> entry` map of stored queries, per-graph (`graphs.<id>.queries`) and top-level for single-graph mode, mirroring how `policy` is wired in both modes. Each entry points at a `.gq` file and carries optional MCP exposure settings (`expose`, `tool_name`), defaulting to not-exposed. Additive: absent `queries:` leaves current behavior unchanged. - QueryEntry { file, mcp: McpSettings { expose, tool_name } } - `queries` field on TargetConfig + OmnigraphConfig (serde default) - query_entries() / target_query_entries() accessors - resolve_query_file() — base_dir-relative `.gq` path resolution - round-trip + absent-block tests Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add stored-query registry loader and GraphHandle wiring Add a `queries` module: QueryRegistry loads each declared `.gq` entry, parses it, and selects the query whose symbol matches the manifest key, asserting the two agree (key == `query <name>` symbol). Identity is the query name; a key/symbol mismatch is a load-time error. Errors are collected, not fail-fast, so a bad registry surfaces every broken entry at once. Schema type-checking is deliberately left to a separate pass so the loader stays callable without an open engine. Thread an `Option<Arc<QueryRegistry>>` through GraphHandle alongside the per-graph policy; the URI-canonicalizing clone propagates it. Production openers default to None for now — the boot path loads and attaches the registry in a later change. - QueryRegistry::{from_specs, load, lookup, iter}; StoredQuery::is_mutation - GraphHandle.queries field, propagated on canonical clone - registry unit tests: identity match/mismatch, multi-query selection, per-entry parse errors, error collection, mutation classification Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: add RFC-002 config & CLI architecture Layered config (user-global ~/.config/omnigraph/ + per-project), a unifying `target` abstraction resolving to (locus, graph, sub-state, credential) with embedded-URI XOR remote-server loci, multi-server × multi-graph client targeting, credentials by-reference, and the file-naming decision: project and server config are one artifact (`omnigraph.yaml`); the only differently-named file is the user-global `config.yaml`, split by scope not role. Includes the 12-factor bind portability rule (prefer --bind/OMNIGRAPH_BIND over a committed server.bind) and the defined-locally / invoked-remotely model for stored queries. Derived from first principles working backwards from what the engine enables; validated against kube/Helix/git/compose. Linked from docs/dev/index.md. Proposed; phased rollout for the MR-973/974/981 family. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add check() to validate stored queries against the live schema A pure check(registry, catalog) that type-checks every stored query via the same typecheck_query_decl the engine runs for inline queries — no parallel implementation. Failures are collected, not fail-fast, so an operator sees every broken query (e.g. a type/property a migration renamed or removed) in one pass. Breakages are fatal (the boot path will refuse to start); warnings are advisory. Pure over (registry, catalog) so it is callable both at boot (engine catalog) and offline from the CLI without an open engine. Advisory lint: an mcp.expose:true query that declares a Vector(N) parameter warns — an LLM cannot supply a raw embedding vector; such a query should take a String parameter and embed server-side. Warns rather than rejects, since service-to-service callers may pass vectors. - CheckReport { breakages, warnings }; has_breakages / is_clean - tests: valid query, unknown type, unknown property, collect-not-fail-fast, vector-param-exposed warns, unexposed silent Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Drop internal plan-label refs from stored-query config comments Doc comments referenced sequencing labels ("C2") that mean nothing to a reader; reword to describe the behavior directly. Comment-only. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile aliases with the role model in RFC-002 Place the existing client-only `aliases:` block in the client/server role split: aliases are client-role (CLI, embedded, ungated) and may live in both user-global and project config; `queries:` is server-role (deployment manifest only). They overlap as "name -> .gq"; `queries:` is the superset, and the end-state subsumes aliases (definition -> queries, target/branch/format -> client invocation context, positional args -> CLI sugar). v1 keeps aliases unchanged. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: make RFC-002 config global-first, project-optional The global user config is the primary, self-sufficient default; the CLI works from any directory with no project file (the kubectl/aws/gh posture), a deliberate flip from today's project-anchored behavior. The project omnigraph.yaml becomes an optional repo-scoped override and the deployment manifest. Uniform schema, both layers optional; global can hold any section including a personal server's graphs/queries. Additive: project still overrides global; the flip adds a fallback layer below the project file rather than removing it. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: justify XDG ~/.config/omnigraph over legacy ~/.omnigraph in RFC-002 Make the rationale explicit: XDG-first because OmniGraph is a client that will cache remote catalogs and keep session state alongside secrets, and XDG separates config / cache / state into distinct dirs (clear cache without touching creds; backups skip cache) whereas a single ~/.omnigraph/ mixes them. Honor ~/.omnigraph/ as a fallback for the peer-group (aws/kube/docker/helix) expectation. Add XDG_CACHE_HOME / XDG_STATE_HOME to the override precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: build RFC-002 credentials on the existing env-file mechanism OmniGraph already has credentials-by-reference: bearer_token_env names the env var, and auth.env_file is a git-ignored dotenv the CLI auto-loads (real env vars win), resolved via resolve_remote_bearer_token. The RFC's proposed credentials.yaml + token_env were redundant parallel inventions. Reconcile: reuse bearer_token_env (extend to servers.<name>) and auth.env_file (add a global ~/.config/omnigraph/.env layered under the project .env.omni); OS keychain is an additive future resolver. No new credentials.yaml. Updated summary, non-goals, background, file-naming, credentials, example, login, migration, rollout. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: use single ~/.omnigraph dir (Helix-style), not XDG, in RFC-002 Reverse the earlier XDG-first call. The prior argument rested on a false dichotomy (single-dir => mixed config/cache/state); in fact the peer tools (aws, kube, helix) achieve separation via SUBDIRECTORIES inside one ~/.tool/ dir (~/.aws/sso/cache/, ~/.kube/cache/), getting cache hygiene AND one discoverable place. So everything goes under ~/.omnigraph/: config.yaml, credentials (dotenv, 0600), cache/, state/. Lower cognitive load, matches what DB/cloud-CLI users expect, matches Helix. OMNIGRAPH_HOME overrides; $XDG_CONFIG_HOME optionally honored but ~/.omnigraph/ is canonical. Updated all paths, the rationale paragraph, the file-naming table (added a cache/state row), and env precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile RFC-002 with shipped/planned CLI tickets Align with reality found in existing tickets: - Noun is graph/graphs, not target/targets (MR-603 done renamed the config key targets->graphs, flag --graph). Use graphs:/--graph; an entry is embedded (uri) XOR remote (server + remote graph name). - ~/.omnigraph/ confirmed by MR-581 (og template pull, done) which already quick-starts templates there. - Templates already exist (MR-581/MR-531) — not invented here. - The init family is already specced (init, quickstart MR-973, serve MR-970, prune MR-972, mcp install MR-974, agent-mode MR-981); this RFC only adds the user route (~/.omnigraph/config.yaml + login). - aliases: -> operations: planned (MR-839). - bearer_token_env gap tracked in MR-971. - query lint/check already exist (MR-639) — registry validator must not collide with the singular `query check`. Add a Reconciliation section; fix the canonical example to graphs:/--graph. Also: merge semantics refined (deep-merge settings, replace named entries, replace lists, config view --resolved --show-origin). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: correct stale-ticket claims and fold init/bootstrap design into RFC-002 Verify against code, not ticket statuses (MR-581 is marked done but is stale/unbuilt): no ~/.omnigraph usage, no template/serve/quickstart/ prune/login commands exist; config still uses aliases: (no operations:). So ~/.omnigraph/ stands on peer-convention merits alone, and templates are a design question, not a foothold. Add §7.5: the three-tier init model (user route = login + ~/.omnigraph/config.yaml; thin project init; fat quickstart + templates) with first-principles positions (split init/login, in-place refuse-if-exists, interactive vs --auto/agent-mode, --template flag, secrets-on-scaffold gitignore rule). This RFC owns only the user route; the rest are sibling tickets (MR-973/970/972/974/981). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: breadboard + slice Shape A in RFC-002 Add the implementation breadboard (places P1-P5, affordances N1-N14 with NEW markers, mermaid) and five vertical slices for the selected config/ CLI/init shape: V1 global layer + merge engine + config view; V2 remote graphs + HTTP-client path + credential resolution; V3 omnigraph login; V4 init-hardening + quickstart + templates (rides MR-970); V5 agent-mode (MR-981). Rollout reordered to the slice sequence; spikes X1-X4 gate their owning slice. V1-V2 close the substantive client->server gap. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add InvokeQuery Cedar action (coarse, graph-scoped) A per-graph, branch-scoped action that gates invoking a server-side stored query by name. Coarse for now: an `invoke_query` allow rule permits any stored query on the graph; a future, additive refinement adds an optional per-query-name scope without changing rules written against the coarse action. Enforcement is at the HTTP boundary; the engine `_as` writers still enforce read/change per the query body, so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). No call site yet — the invocation handler wires it in a later change (same pattern as Admin/GraphList added ahead of consumers). - variant + as_str/resource_kind(Graph)/FromStr/uses_branch_scope - Cedar schema: invoke_query appliesTo Graph - tests: per-graph allow/deny, branch-scope accepted Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Load and type-check stored queries at server boot, refusing breakage At startup the server now loads each graph's stored-query registry, type-checks every query against that graph's live schema, and refuses to boot if any query references a type/property the schema doesn't have (same posture as bad policy YAML) — so schema drift surfaces at the deploy boundary, not silently at invocation. Non-blocking warnings are logged. The validated registry is attached to the GraphHandle (the two production sites previously held `queries: None`). Loading (parse + key==symbol identity) happens at settings-build time where the config is in scope; the schema type-check happens after each engine opens (single mode in `open_single_with_queries`, multi mode in `open_single_graph`). `open_with_bearer_tokens_and_policy` delegates with an empty registry so its 18 test callers are unchanged; the public `new_*` constructors are unchanged (only the private build path threads the registry). - ServerConfigMode::Single / GraphStartupConfig carry the loaded registry - boot tests: valid registry boots; type-broken query refuses boot + names it Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add `omnigraph queries validate` and `queries list` CLI `queries validate` type-checks the stored-query registry against the live schema offline — it opens the selected graph, runs the same check() the server runs at boot, prints breakages/warnings (human or --json), and exits non-zero on any breakage — so an operator can catch a query broken by a schema change without restarting the server. `queries list` prints each registered query's name, MCP exposure, and typed params. Named `validate` (not `check`) to avoid overlap with the existing `omnigraph lint` — `query check`/`query lint` are already deprecated argv-shims to `lint`. Registry entries resolve like the server: a named graph uses its per-graph `queries:`; otherwise the top-level one. - Queries subcommand group; reuses QueryRegistry::load + check from omnigraph-server; local-only (needs the schema), mirrors lint - tests: clean registry exits 0, broken query exits non-zero + names it, list shows the query and its typed params Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Route registry selection through one shared query_entries_for The "which queries: block applies for graph X" rule existed twice — the server boot path and the CLI's registry_entries — and had already drifted: the CLI carried an unreachable unwrap_or_else fallback the server lacked. Add OmnigraphConfig::query_entries_for(graph: Option<&str>) as the single definition (named graph -> its per-graph block; otherwise top-level) and route all three sites through it: server single mode, server multi-graph loop, and the CLI. The CLI's dead fallback arm is deleted; CLI and server now resolve identically by construction. No behavior change. Extends the config round-trip test to pin the selector, including the unknown-name -> top-level fallback the deleted CLI arm covered. * Funnel registry validation through one validate_and_attach gate The check -> refuse-on-breakage -> log-warnings -> empty->None block was copy-pasted across both open paths (single mode and the multi-graph per-graph open), differing only by the graph label. A third opener could attach a registry that was never schema-checked. Extract validate_and_attach(queries, catalog, label) -> Option<Arc<..>> as the single gate both paths call, so attaching an unchecked registry is no longer expressible. The catalog handle is an owned Arc, so calling it before the multi-mode policy match (which rebinds db) is borrow-clean. No behavior change. Adds a direct unit test of the helper (empty / clean / breakage incl. the graph label in the message) — covering the multi-graph path's logic, which previously had no boot-refusal coverage. * Resolve param types structurally in the MCP vector lint The exposed-query advisory detected vector params with type_name.starts_with("Vector(") — a second copy of the compiler's own ScalarType::from_str_name vector parsing that could drift from it. Key the lint off PropType::from_param_type_name + ScalarType::Vector(_) instead, the one canonical resolver the type system already uses. Any future param-suppliability lint now reads the structured type rather than scanning the surface string. Behavior-preserving: the grammar forbids list-of-vector params (list_type = "[" base_type "]", and base_type excludes Vector), so the only input where the structured and string checks could differ is unparseable. Adds a guard test that an exposed String param does not false-trigger the warning. * Refuse duplicate MCP tool names across exposed stored queries The effective MCP tool name (explicit tool_name, else the query name) is a second identity namespace beside the registry key, but nothing enforced it unique — two exposed queries could claim one catalog key, and each consumer re-derived the name ad hoc. Add StoredQuery::effective_tool_name() as the one definition, and a load-time uniqueness pass in from_specs over exposed queries: a collision is a collected LoadError naming the loser and the winner. Scoped to exposed queries (unexposed have no MCP tool); deterministic over the BTreeMap so the first-declared wins and the error order is stable. New (rare) refusal: a config with colliding exposed tool names now fails `omnigraph queries validate` offline and refuses server boot, the same posture as a malformed registry. Release-note-worthy. Test-first: duplicate_exposed_tool_name_is_a_load_error (red before the pass, green after) + a CLI offline test; the unexposed sibling pins the exposed-only scope; effective_tool_name asserts folded into the load test. * docs: document the queries registry, CLI, and invoke_query action The stored-query surface shipped without user docs. Add it, per the same-PR maintenance contract: - policy.md: invoke_query as per-graph action #10 (branch-scoped), with the double-gating note; renumber graph_list; add it to the branch_scope list. - cli-reference.md: the `queries validate | list` command, and the `queries:` config block (per-graph + top-level) with mcp.expose/tool_name and the tool-name uniqueness rule. - server.md: boot-time stored-query type-check (refuse on breakage), noting invocation over HTTP/MCP is not yet exposed. * Add POST /queries/{name} stored-query invocation handler Invoke a curated server-side stored query by name: source + name come from the per-graph queries: registry, the client sends only runtime inputs (params, branch, snapshot). Gated by the invoke_query Cedar action at the boundary; the handler delegates to the existing run_query/run_mutate, whose inner Read/Change enforce still runs — so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). - InvokeStoredQueryRequest + an untagged InvokeStoredQueryResponse { Read(ReadOutput), Change(ChangeOutput) } → one Json<_> return type and a oneOf 200 schema (a correct contract, not a wrong-but-simple one). - Route lives in per_graph_protected → single-mode /queries/{name} and multi-mode /graphs/{id}/queries/{name} for free. - Deny == unknown: an invoke_query denial and a missing query both return the same 404, so the catalog can't be probed by an unauthorized caller. - OpenAPI regenerated; tests cover read, mutation double-gate (403 vs 200), bad-param 400, and the identical-404 deny path. Completes the MR-969 V1 invocation slice (registry + /queries/{name} + invoke_query). * docs: stored-query invocation endpoint; flip the not-yet-exposed caveat Now that POST /queries/{name} ships (C7), document it: add the endpoint to server.md's inventory + an invocation section (body, untagged read/mutate envelope, invoke_query gate, double-gated mutations, deny == 404), and flip the startup note that said invocation was not yet exposed. In policy.md, replace "no invocation call site yet" on the invoke_query action with a pointer to the endpoint. * Scope the stored-query 404-hiding claim to non-invoke_query callers Review found the deny==404 catalog-hiding was overstated as a contract: it holds only at the outer invoke_query gate. A caller that HOLDS invoke_query but lacks read/change gets the inner gate's 403 for an existing query vs 404 for an unknown one — so existence is visible to grant-holders by design (the intended double-gate). The handler docstring, OpenAPI 404 description, and server.md all claimed the 404 was airtight against any denied actor. Correct the wording in all three (no behavior change) and add the missing symmetric test (invoke_query but no read -> 403 for an existing query, 404 for unknown) so the actual contract is pinned. Also document that in default-deny mode (tokens, no policy) every invocation 404s until an invoke_query rule is configured. Nits: the from_specs collision comment said "first declared wins" but it is lexicographically-first by name (BTreeMap); the effective_tool_name docstring overclaimed the CLI display routes through it (it resolves the rule on its own output DTO). * Default mcp.expose to true (the manifest entry is the opt-in) expose controls MCP-catalog membership only — it is not an authorization gate (invocation is gated by invoke_query regardless). So requiring a per-query mcp.expose: true was friction with no safety benefit: a non-exposed query is still HTTP-invocable by name. Flip the default so declaring a query in the manifest exposes it to the agent tool catalog by default; expose: false is the escape hatch for service-only queries. Both the absent-mcp path (Default impl) and the present-but-no-expose path (serde default fn) now yield true. Doc comments + cli-reference updated; the config round-trip test asserts the new default. * Add GET /queries stored-query catalog endpoint List a graph's mcp.expose stored queries as a typed tool catalog so a client (the MCP server) can register them as tools without fetching .gq source. Each entry carries name, MCP tool_name, description/instruction, a read/mutate flag, and decomposed typed params (kind enum: string|bool|int| bigint|float|date|datetime|blob|vector|list, plus item_kind for lists and vector_dim) — so the consumer builds an input schema with a closed match and never re-parses omnigraph type spelling. I64/U64 are bigint (string on the wire): a JSON number loses precision past 2^53 and the engine already accepts decimal strings. Read-gated (works in default-deny; the catalog is graph-wide, authorized against main). NOT Cedar-filtered per query yet — a reader can list a query whose invoke_query they lack (documented gap until per-query authz lands); invocation stays invoke_query-gated + deny==404. - api: QueriesCatalogOutput / QueryCatalogEntry / ParamDescriptor / ParamKind + query_catalog_entry (reuses PropType::from_param_type_name; scalar_kind is exhaustive, so a new ScalarType is a compile error here until catalogued). - GET /queries route in per_graph_protected (→ /graphs/{id}/queries in multi mode); OpenAPI regenerated; path allowlists updated. - Tests: projection unit (every kind, list, vector, nullable, mutation, empty) + handler (exposed-only filter, read-gate probe-oracle, empty registry). * docs: GET /queries stored-query catalog endpoint Document the catalog: the endpoint table row (GET /queries, read-gated), a catalog section (typed-param kind enum, bigint/date/datetime/blob-as-string, graph-wide/branch-independent, mcp.expose default true, the read-gated probe-oracle gap), and flip the startup note now that the catalog ships. * Collect file-I/O and parse errors in QueryRegistry::load in one pass load() early-returned on any unreadable .gq file, masking parse / identity / tool-name-collision errors in the OTHER (readable) files — so an operator fixed the missing file, restarted, and only then saw the next broken query. Now it collects I/O errors but still runs from_specs on the readable specs and returns the union, so every broken entry surfaces at once (matching the collected-errors contract the rest of the registry already follows). Safe: from_specs' tool-name collision check runs over loaded queries only, so dropping an I/O-failed entry can only under-report a collision, never invent one. I/O errors are ordered first (BTreeMap key order), then spec errors. Adds a load-level test (tempdir: a valid, a missing, and a parse-broken .gq) asserting all three surface in one Err — confirmed red before the fix. * Make invoke_query graph-scoped (one branch authority) invoke_query gates reaching the curated stored-query surface — a graph-level capability. Per-branch/snapshot access is already enforced by the inner read/change gate in run_query/run_mutate (authorized against the resolved branch), so branch-scoping the outer gate was redundant AND wrong for snapshot reads (it defaulted to main). Drop the branch dimension: remove InvokeQuery from uses_branch_scope (it joins admin as graph-scoped) and authorize the boundary gate with branch: None. Lossless: an actor confined to branch X by their read/change rules can still only invoke a stored query that touches X. A rule that sets branch_scope on invoke_query is now rejected by validate() — write invoke_query in its own rule. Ripple (atomic): restructure the server invoke fixture so invoke_query sits in its own branch_scope-free rule; invert invoke_query_is_branch_scoped -> invoke_query_rejects_branch_scope; the per-graph authorize test uses branch: None; docs (policy.md, server.md, the InvokeQuery doc). No wire/OpenAPI change. * Resolve graph config by identity, not server mode Which policy/queries block applies for a graph was decided three different, mode-dependent ways: single-mode boot used top-level even for a named graph; multi-mode used per-graph (and silently ignored a top-level queries block); the CLI used per-graph for a named target. So `queries validate --target prod` could check a different registry than the single-mode server loaded, and a named graph's per-graph policy/queries were silently shadowed. Make config a function of graph IDENTITY: a graph served by NAME (--target/server.graph, a graphs: entry) uses its own graphs.<name>.{policy, queries}; a bare URI is anonymous and uses top-level. One rule, applied by single-mode boot, multi-mode boot, and the CLI — so they can't diverge and the CLI predicts the server exactly. No silent ignore: serving a named graph while a top-level policy/queries block is populated now refuses boot, naming the block (the multi-mode top-level-policy bail, extended to queries and to single-mode-named). The CLI's `queries validate` derives the schema URI and the registry from ONE selection, and a positional URI forces anonymous (ignoring cli.graph) so the two can't come from different graphs. BREAKING (released behavior): single mode by name (--target/server.graph) with top-level policy/queries previously used top-level; it now uses the per-graph block and refuses boot if top-level is also populated. Bare-URI single mode is unchanged. Loud, with migration text pointing at graphs.<name>. - config: resolve_policy_file_for (policy sibling of query_entries_for, no top-level fallback) + populated_top_level_blocks for the coherence check. - characterization tests (single-mode named -> per-graph; named + top-level -> bail; multi-mode top-level queries -> bail; CLI positional-URI -> top-level). - docs: policy.md, server.md, cli-reference.md. * docs: RFC-002 credentials keyed by server name (keychain/profile/env) Reworks the RFC's credentials model: secrets are keyed by server name — OS keychain `omnigraph:<server>` (preferred) -> a `[<server>]` profile in `~/.omnigraph/credentials` -> `OMNIGRAPH_TOKEN[_<SERVER>]` env (CI), the AWS/gh/kube model. `servers.<name>` is endpoint-only by default but may carry an explicit, secret-free `auth: { token: { env|file|command|keychain } }` source. The shipped `bearer_token_env` + `.env.omni` dotenv remain a legacy compat path; no `credentials.yaml`. * docs: RFC-002 — typed graph locator (storage/server/graph_id), not a uri string Add §1.1: the resolved graph address is a typed GraphLocator (Embedded{storage} | Remote{server, graph_id}), not a flat uri: String. Diagnoses the string model's cost in the code today (~16 is_remote_uri forks, TargetConfig can't express multi-server x multi-graph, the CLI bails on remote, the ts SDK models baseUrl+graphId separately) and settles the YAML naming so the key names the locus: - storage: (embedded) — shipped uri: is a deprecated alias - server: + graph_id: (remote) — graph_id defaults to the entry key - storage xor server, reject both/neither (no silent ambiguity) Kills the graphs:/graph: collision and the uri:-might-be-a-server ambiguity. Updates the §1/§8 examples and the entry-shape notes to the new naming. * Test: queries list must reject an unknown --target queries list opens no graph URI, so unknown-graph validation does not ride along on resolve_target_uri the way it does for every other command. The new test reproduces the gap: with an unknown --target the command currently exits 0 and prints the (empty) top-level registry instead of erroring like the URI-resolving commands do. Fails against current code; the fix follows. * Validate the graph selection in queries list Graph-existence validation was a side effect of URI resolution: every URI-resolving command rejects an unknown --target via resolve_target_uri, but queries list opens no URI, so query_entries_for(Some(unknown)) silently fell back to the top-level registry and showed the wrong (or empty) catalog. Make membership a property of the selection: add the fallible resolve_graph_selection alongside the infallible query_entries_for (a known name passes through, an unknown name errors with the same message as resolve_target_uri, None stays anonymous), and validate the selection in execute_queries_list. query_entries_for is unchanged — server boot's bare-URI path still needs its None -> top-level arm. * Surface policy-engine errors from stored-query invoke The invoke handler mapped every authorize_request failure to 404 ('stored query not found'), which collapsed the authorization decision (deny -> 403) together with operational failures (no actor -> 401, Cedar evaluation error -> 500). A real policy-engine 500 was hidden as a missing query. Separate the two concerns instead of sniffing the masked status. Extract authorize() returning an Authz { Allowed, Denied(msg) } decision and reserve Err for operational failures only; authorize_request becomes a thin wrapper that maps Denied -> 403, so the 16 deny-as-403 callers are unchanged. The invoke handler now matches the decision directly: a denial stays 404 (deny == missing, so the catalog can't be probed without the grant), while a 401/500 propagates with its true status. 500 is now a reachable outcome on POST /queries/{name}; document it in the endpoint responses and regenerate openapi.json. * Extract the named-graph/top-level coherence rule into one helper The rule 'a named graph uses its own graphs.<name> block, so a populated top-level block is a config error' lived inline in single-mode server boot. Extract it to OmnigraphConfig::ensure_top_level_blocks_honored so the same definition can be shared by the CLI selection gate (next commit) and the two can't drift. Boot calls the helper; the message is reworded context-neutral (drops 'serving') so it reads correctly from both boot and the CLI. Behavior-preserving: multi-graph mode keeps its own unconditional check, and single_mode_named_graph_rejects_top_level_blocks still passes. * Test: queries validate/list must reject a named graph with a top-level block Server boot refuses a config where a graph is selected by name yet a top-level queries:/policy.file block is populated (the block would be silently ignored). The CLI's queries validate/list resolve the same named selection but skip that coherence check, so they give a false green / list the per-graph block. The new test reproduces it: validate prints OK and list succeeds where boot would refuse. Fails against current code; the fix follows. * Enforce top-level coherence in the single CLI selection gate queries validate validated graph membership only as a side effect of URI resolution and queries list only via resolve_graph_selection's membership check; neither applied the named-graph/top-level coherence rule server boot enforces, so both gave a false green on a config boot refuses. Fold ensure_top_level_blocks_honored into resolve_graph_selection so it is the single gate that returns only valid + server-coherent selections, and route resolve_selected_graph (queries validate) through it; queries list already calls the gate. A named graph with a populated top-level block now errors in both commands, matching boot. A positional URI stays anonymous (top-level honored), so queries_validate_positional_uri_ignores_default_graph is unaffected. * docs: RFC-003 — MCP server surface for omnigraph-server Detailed MCP-transport design for the stored-query/MCP work, building on the shipped #128 registry. Corrects the draft against the branch head: the coarse invoke_query gate + 404 denial-masking are already wired (server_invoke_query), so per-query invoke_query scope (PolicyRequest has no query-name dimension yet) is the real prerequisite; positions the doc as superseding rfc-001's MCP transport (/mcp/tools+/mcp/invoke) and reconciles the shipped mcp.expose YAML form and the schema-introspection non-goal; grounds the parity surface in the actual omnigraph-ts package (13 tools with read/change ids, 2 resources). * docs(config): clarify graph config boundaries * fix(config): enforce graph-scoped policies and query validation * fix(cli): require graph selection for scoped query registries * fix(server): preserve named graph id in single mode policy * fix(cli): share graph identity for policy resolution * test(cli): cover policy tooling server graph selection * fix(cli): honor server graph for policy tooling --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-01 22:50:31 +02:00
docs(rfc-003): fold external review into correct-by-design fixes An external review pass raised 8 findings; verified 7 valid (2 confirmed against the engine coercer). Folded them in as class-closing fixes rather than point patches: - §9.1 (③④, the headline): the JSON-Schema generator was a second hand-written copy of the engine's input contract — Blob (base64 vs URI string) and nullable (explicit null) were two drifts of one class. Move the projection to a single param_json_schema in omnigraph-api-types (next to ParamKind/ParamDescriptor), fix Blob -> {"type":"string","format":"uri"} (query_input.rs:449 / api-types:354 say blob-URI string) and nullable -> anyOf[..,null] (query_input.rs:273,296), and lock it to json_value_to_literal_typed with a schema/engine equivalence test so any future drift is a CI failure. - §7/§4 (①): replace the fail-open "empty allowed_origins => skip" with a total OriginPolicy and a single McpHostPolicy::from_bind constructor (remote default DenyBrowsers, enforced by origin_guard independent of rmcp's empty-list quirk). No absent-=>-skip state can be constructed. - §6/§12/§16 (②): make the non-paginated list seam a stated contract (Vec<T>, no nextCursor; meta mode bounds large catalogs) and drop the pagination claims the signature couldn't express. - §9.3 (⑦): built-in/stored tool-name collision becomes a cluster validate/boot error (fold built-in names into the registry uniqueness check), not a silent skip — per the invariants deny-list. - §9.2 (⑥): stored_query_mode folded into the one per-graph mcp: block (Phase 6), not a floating key; not configurable until that surface exists. - §10/§1 (⑧): scope derives from the per-graph mount; server-scoped `health` becomes graph-scoped `graph_health` (server liveness stays REST /healthz). - §13 (⑤, doc-only): OpenAI row corrected to the `authorization` field; Phase-1 reachability via static bearer is unchanged. §17 records the locked decisions; the validation header notes the review pass.
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A tool's scope is **derived from where it is mounted, not asserted independently**:
MCP mounts only under `/graphs/{graph_id}/mcp` (§15), so every MCP tool is graph-scoped
by construction. There is no server-scoped MCP tool — a "server-scoped tool on a
per-graph mount" is unrepresentable (⑧). Server-level liveness stays on REST
`GET /healthz`; the MCP liveness tool is graph-scoped `graph_health` (confirms *this
graph's* handle is live) and needs no Cedar gate.
| MCP tool | Scope | Cedar action |
|---|---|---|
docs(rfc-003): fold external review into correct-by-design fixes An external review pass raised 8 findings; verified 7 valid (2 confirmed against the engine coercer). Folded them in as class-closing fixes rather than point patches: - §9.1 (③④, the headline): the JSON-Schema generator was a second hand-written copy of the engine's input contract — Blob (base64 vs URI string) and nullable (explicit null) were two drifts of one class. Move the projection to a single param_json_schema in omnigraph-api-types (next to ParamKind/ParamDescriptor), fix Blob -> {"type":"string","format":"uri"} (query_input.rs:449 / api-types:354 say blob-URI string) and nullable -> anyOf[..,null] (query_input.rs:273,296), and lock it to json_value_to_literal_typed with a schema/engine equivalence test so any future drift is a CI failure. - §7/§4 (①): replace the fail-open "empty allowed_origins => skip" with a total OriginPolicy and a single McpHostPolicy::from_bind constructor (remote default DenyBrowsers, enforced by origin_guard independent of rmcp's empty-list quirk). No absent-=>-skip state can be constructed. - §6/§12/§16 (②): make the non-paginated list seam a stated contract (Vec<T>, no nextCursor; meta mode bounds large catalogs) and drop the pagination claims the signature couldn't express. - §9.3 (⑦): built-in/stored tool-name collision becomes a cluster validate/boot error (fold built-in names into the registry uniqueness check), not a silent skip — per the invariants deny-list. - §9.2 (⑥): stored_query_mode folded into the one per-graph mcp: block (Phase 6), not a floating key; not configurable until that surface exists. - §10/§1 (⑧): scope derives from the per-graph mount; server-scoped `health` becomes graph-scoped `graph_health` (server liveness stays REST /healthz). - §13 (⑤, doc-only): OpenAI row corrected to the `authorization` field; Phase-1 reachability via static bearer is unchanged. §17 records the locked decisions; the validation header notes the review pass.
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| `graph_health` | graph | none (liveness/version) |
| `graph_snapshot`, `schema_get`, `branch_list`, `commit_list`, `commit_get` | graph | `Read` |
| `graph_query` (ad-hoc read) | graph | `Read` (`run_query` self-authorizes) |
| `graph_mutate` (ad-hoc write) | graph | `Change` |
| `graph_load` (NDJSON) | graph | `Change` (+ `BranchCreate` **iff** `from` is present — see §11) |
| `branch_create` / `branch_delete` / `branch_merge` | graph | `BranchCreate` / `BranchDelete` / `BranchMerge` |
| `schema_apply` (`allow_data_loss`) | graph | `SchemaApply` |
| stored query (`per_query`) / `stored_query_run` (`meta`) | graph | `InvokeQuery` (coarse) then inner `Read`/`Change` |
**Naming.** Tool ids are **domain-qualified `snake_case`** (`graph_query`,
`branch_merge`, `schema_apply`, …) within the spec's `[A-Za-z0-9_.-]`, 1128-char
constraint. Domain qualification (rather than bare `query`/`mutate`) reduces
cross-server collisions when a client loads omnigraph alongside other MCP servers;
clients that auto-prefix by connection name (e.g. OpenCode → `omnigraph_graph_query`)
compose cleanly. Names are a stability contract (Hyrum's Law) — don't churn them.
**Annotations (set explicitly).** MCP annotation defaults are pessimistic
(`readOnlyHint=false`, `destructiveHint=true`, `idempotentHint=false`,
`openWorldHint=true`), so an unannotated read tool is mistaken for a destructive
open-world writer. Set them via rmcp's `ToolAnnotations` (`read_only_hint`,
`destructive_hint`, `idempotent_hint`, `open_world_hint`):
- read tools (`graph_query`, `graph_snapshot`, `schema_get`, `branch_list`,
`commit_*`, stored *reads*) → `read_only_hint = true`, `open_world_hint = false`.
- writers (`graph_mutate`, `graph_load`, `branch_delete`, `branch_merge`,
`schema_apply`) → `read_only_hint = false`, `destructive_hint = true`,
`open_world_hint = false`. Clients use `destructiveHint` to drive human-confirmation
prompts.
- `branch_create` (additive) → `destructive_hint = false`.
Annotations are **advisory hints, not a security boundary** (clients may ignore them);
**Cedar is the enforcement boundary.**
Represent built-ins as a `Builtin` enum (one variant per tool; `descriptor` / `gate` /
`call` as match arms) — lower liability than ~13 unit structs + `dyn`. Stored-query
tools are a sibling populator over `handle.queries`.
feat(mcp): MCP server surface — Streamable-HTTP transport + tool/resource projection (RFC-003) Add the `omnigraph-mcp` crate (stateless Streamable-HTTP transport, `McpBackend` seam, fail-closed Host/Origin policy) and the server backend projecting built-in operations and the per-graph stored-query registry as MCP tools + resources over `POST /graphs/{id}/mcp`. Every tool delegates to the same engine/handler functions the REST routes use and is gated by the same Cedar `authorize` path; reads/writes carry structured output. Includes three correctness fixes from review + live testing: - tools/list is a faithful relaxation of the per-call gate: a built-in whose authorization depends on a caller-chosen branch is shown iff the actor could invoke it on some branch, via PolicyEngine::permits_on_any_branch (capability probe through the same Cedar authorizer). A fabricated-`main` probe wrongly hid graph_mutate under the canonical "protect main, write unprotected" policy. - The stored-query surface honors mode + `expose` on call as well as on list: resolve_stored_tool is the single membership test, so the meta pair (stored_query_list/stored_query_run) is callable only in `meta` mode and stored_query_run resolves exposed-only. An `expose:false` query is unreachable by name on the agent surface (it stays HTTP/service-callable). - The loopback Host allow-list is the full set [127.0.0.1, ::1, localhost] (matches rmcp's default), so an IPv6 loopback `Host: [::1]` is accepted regardless of which stack the server bound. The protocol-version contract is documented (initialize negotiates the version in its body, so the MCP-Protocol-Version header is validated on non-init requests only) and pinned by a test. Tests: omnigraph-mcp/tests/standalone.rs, omnigraph-server/tests/mcp.rs, omnigraph-policy permits_on_any_branch unit test, omnigraph-api-types schema projection. Full workspace gate green.
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**`list_tools` / `list_resources` are Cedar-filtered as a *relaxation* of the
call-path gate** — listing never hides a tool the caller could invoke on some
branch (over-showing is the safe direction; `call_tool` is authoritative). A
built-in whose authorization depends on a caller-chosen branch (`graph_mutate`,
`graph_load`, `branch_*`) is shown iff `authorize_any_branch`
`PolicyEngine::permits_on_any_branch(actor, action)` is true: that probes the
branch-shape space (omitted / protected / unprotected) through the same Cedar
authorizer and returns true if *any* shape is allowed. A fixed-branch probe is
wrong here — both a fabricated `main` (denied under "protect `main`, write
unprotected branches", the canonical workflow) and a `branch: None` probe
(matches no `branch_scope` rule) under-show `graph_mutate` to an actor who can
write feature branches. The stored-query surface gets the same list/call
agreement structurally: `resolve_stored_tool` is the single membership test, so
the meta pair is callable only in `meta` mode and `stored_query_run` resolves
**exposed-only** (an `expose:false` query is unreachable by name on the agent
surface, though it stays HTTP/service-callable).
## 11. Dispatch reuse + error classification
Stored-query registry foundation + config/CLI RFC-002 (#128) * MR-969: add stored-query registry config surface Introduce the `queries:` block in omnigraph.yaml — an inline `name -> entry` map of stored queries, per-graph (`graphs.<id>.queries`) and top-level for single-graph mode, mirroring how `policy` is wired in both modes. Each entry points at a `.gq` file and carries optional MCP exposure settings (`expose`, `tool_name`), defaulting to not-exposed. Additive: absent `queries:` leaves current behavior unchanged. - QueryEntry { file, mcp: McpSettings { expose, tool_name } } - `queries` field on TargetConfig + OmnigraphConfig (serde default) - query_entries() / target_query_entries() accessors - resolve_query_file() — base_dir-relative `.gq` path resolution - round-trip + absent-block tests Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add stored-query registry loader and GraphHandle wiring Add a `queries` module: QueryRegistry loads each declared `.gq` entry, parses it, and selects the query whose symbol matches the manifest key, asserting the two agree (key == `query <name>` symbol). Identity is the query name; a key/symbol mismatch is a load-time error. Errors are collected, not fail-fast, so a bad registry surfaces every broken entry at once. Schema type-checking is deliberately left to a separate pass so the loader stays callable without an open engine. Thread an `Option<Arc<QueryRegistry>>` through GraphHandle alongside the per-graph policy; the URI-canonicalizing clone propagates it. Production openers default to None for now — the boot path loads and attaches the registry in a later change. - QueryRegistry::{from_specs, load, lookup, iter}; StoredQuery::is_mutation - GraphHandle.queries field, propagated on canonical clone - registry unit tests: identity match/mismatch, multi-query selection, per-entry parse errors, error collection, mutation classification Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: add RFC-002 config & CLI architecture Layered config (user-global ~/.config/omnigraph/ + per-project), a unifying `target` abstraction resolving to (locus, graph, sub-state, credential) with embedded-URI XOR remote-server loci, multi-server × multi-graph client targeting, credentials by-reference, and the file-naming decision: project and server config are one artifact (`omnigraph.yaml`); the only differently-named file is the user-global `config.yaml`, split by scope not role. Includes the 12-factor bind portability rule (prefer --bind/OMNIGRAPH_BIND over a committed server.bind) and the defined-locally / invoked-remotely model for stored queries. Derived from first principles working backwards from what the engine enables; validated against kube/Helix/git/compose. Linked from docs/dev/index.md. Proposed; phased rollout for the MR-973/974/981 family. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add check() to validate stored queries against the live schema A pure check(registry, catalog) that type-checks every stored query via the same typecheck_query_decl the engine runs for inline queries — no parallel implementation. Failures are collected, not fail-fast, so an operator sees every broken query (e.g. a type/property a migration renamed or removed) in one pass. Breakages are fatal (the boot path will refuse to start); warnings are advisory. Pure over (registry, catalog) so it is callable both at boot (engine catalog) and offline from the CLI without an open engine. Advisory lint: an mcp.expose:true query that declares a Vector(N) parameter warns — an LLM cannot supply a raw embedding vector; such a query should take a String parameter and embed server-side. Warns rather than rejects, since service-to-service callers may pass vectors. - CheckReport { breakages, warnings }; has_breakages / is_clean - tests: valid query, unknown type, unknown property, collect-not-fail-fast, vector-param-exposed warns, unexposed silent Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Drop internal plan-label refs from stored-query config comments Doc comments referenced sequencing labels ("C2") that mean nothing to a reader; reword to describe the behavior directly. Comment-only. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile aliases with the role model in RFC-002 Place the existing client-only `aliases:` block in the client/server role split: aliases are client-role (CLI, embedded, ungated) and may live in both user-global and project config; `queries:` is server-role (deployment manifest only). They overlap as "name -> .gq"; `queries:` is the superset, and the end-state subsumes aliases (definition -> queries, target/branch/format -> client invocation context, positional args -> CLI sugar). v1 keeps aliases unchanged. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: make RFC-002 config global-first, project-optional The global user config is the primary, self-sufficient default; the CLI works from any directory with no project file (the kubectl/aws/gh posture), a deliberate flip from today's project-anchored behavior. The project omnigraph.yaml becomes an optional repo-scoped override and the deployment manifest. Uniform schema, both layers optional; global can hold any section including a personal server's graphs/queries. Additive: project still overrides global; the flip adds a fallback layer below the project file rather than removing it. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: justify XDG ~/.config/omnigraph over legacy ~/.omnigraph in RFC-002 Make the rationale explicit: XDG-first because OmniGraph is a client that will cache remote catalogs and keep session state alongside secrets, and XDG separates config / cache / state into distinct dirs (clear cache without touching creds; backups skip cache) whereas a single ~/.omnigraph/ mixes them. Honor ~/.omnigraph/ as a fallback for the peer-group (aws/kube/docker/helix) expectation. Add XDG_CACHE_HOME / XDG_STATE_HOME to the override precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: build RFC-002 credentials on the existing env-file mechanism OmniGraph already has credentials-by-reference: bearer_token_env names the env var, and auth.env_file is a git-ignored dotenv the CLI auto-loads (real env vars win), resolved via resolve_remote_bearer_token. The RFC's proposed credentials.yaml + token_env were redundant parallel inventions. Reconcile: reuse bearer_token_env (extend to servers.<name>) and auth.env_file (add a global ~/.config/omnigraph/.env layered under the project .env.omni); OS keychain is an additive future resolver. No new credentials.yaml. Updated summary, non-goals, background, file-naming, credentials, example, login, migration, rollout. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: use single ~/.omnigraph dir (Helix-style), not XDG, in RFC-002 Reverse the earlier XDG-first call. The prior argument rested on a false dichotomy (single-dir => mixed config/cache/state); in fact the peer tools (aws, kube, helix) achieve separation via SUBDIRECTORIES inside one ~/.tool/ dir (~/.aws/sso/cache/, ~/.kube/cache/), getting cache hygiene AND one discoverable place. So everything goes under ~/.omnigraph/: config.yaml, credentials (dotenv, 0600), cache/, state/. Lower cognitive load, matches what DB/cloud-CLI users expect, matches Helix. OMNIGRAPH_HOME overrides; $XDG_CONFIG_HOME optionally honored but ~/.omnigraph/ is canonical. Updated all paths, the rationale paragraph, the file-naming table (added a cache/state row), and env precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile RFC-002 with shipped/planned CLI tickets Align with reality found in existing tickets: - Noun is graph/graphs, not target/targets (MR-603 done renamed the config key targets->graphs, flag --graph). Use graphs:/--graph; an entry is embedded (uri) XOR remote (server + remote graph name). - ~/.omnigraph/ confirmed by MR-581 (og template pull, done) which already quick-starts templates there. - Templates already exist (MR-581/MR-531) — not invented here. - The init family is already specced (init, quickstart MR-973, serve MR-970, prune MR-972, mcp install MR-974, agent-mode MR-981); this RFC only adds the user route (~/.omnigraph/config.yaml + login). - aliases: -> operations: planned (MR-839). - bearer_token_env gap tracked in MR-971. - query lint/check already exist (MR-639) — registry validator must not collide with the singular `query check`. Add a Reconciliation section; fix the canonical example to graphs:/--graph. Also: merge semantics refined (deep-merge settings, replace named entries, replace lists, config view --resolved --show-origin). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: correct stale-ticket claims and fold init/bootstrap design into RFC-002 Verify against code, not ticket statuses (MR-581 is marked done but is stale/unbuilt): no ~/.omnigraph usage, no template/serve/quickstart/ prune/login commands exist; config still uses aliases: (no operations:). So ~/.omnigraph/ stands on peer-convention merits alone, and templates are a design question, not a foothold. Add §7.5: the three-tier init model (user route = login + ~/.omnigraph/config.yaml; thin project init; fat quickstart + templates) with first-principles positions (split init/login, in-place refuse-if-exists, interactive vs --auto/agent-mode, --template flag, secrets-on-scaffold gitignore rule). This RFC owns only the user route; the rest are sibling tickets (MR-973/970/972/974/981). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: breadboard + slice Shape A in RFC-002 Add the implementation breadboard (places P1-P5, affordances N1-N14 with NEW markers, mermaid) and five vertical slices for the selected config/ CLI/init shape: V1 global layer + merge engine + config view; V2 remote graphs + HTTP-client path + credential resolution; V3 omnigraph login; V4 init-hardening + quickstart + templates (rides MR-970); V5 agent-mode (MR-981). Rollout reordered to the slice sequence; spikes X1-X4 gate their owning slice. V1-V2 close the substantive client->server gap. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add InvokeQuery Cedar action (coarse, graph-scoped) A per-graph, branch-scoped action that gates invoking a server-side stored query by name. Coarse for now: an `invoke_query` allow rule permits any stored query on the graph; a future, additive refinement adds an optional per-query-name scope without changing rules written against the coarse action. Enforcement is at the HTTP boundary; the engine `_as` writers still enforce read/change per the query body, so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). No call site yet — the invocation handler wires it in a later change (same pattern as Admin/GraphList added ahead of consumers). - variant + as_str/resource_kind(Graph)/FromStr/uses_branch_scope - Cedar schema: invoke_query appliesTo Graph - tests: per-graph allow/deny, branch-scope accepted Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Load and type-check stored queries at server boot, refusing breakage At startup the server now loads each graph's stored-query registry, type-checks every query against that graph's live schema, and refuses to boot if any query references a type/property the schema doesn't have (same posture as bad policy YAML) — so schema drift surfaces at the deploy boundary, not silently at invocation. Non-blocking warnings are logged. The validated registry is attached to the GraphHandle (the two production sites previously held `queries: None`). Loading (parse + key==symbol identity) happens at settings-build time where the config is in scope; the schema type-check happens after each engine opens (single mode in `open_single_with_queries`, multi mode in `open_single_graph`). `open_with_bearer_tokens_and_policy` delegates with an empty registry so its 18 test callers are unchanged; the public `new_*` constructors are unchanged (only the private build path threads the registry). - ServerConfigMode::Single / GraphStartupConfig carry the loaded registry - boot tests: valid registry boots; type-broken query refuses boot + names it Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add `omnigraph queries validate` and `queries list` CLI `queries validate` type-checks the stored-query registry against the live schema offline — it opens the selected graph, runs the same check() the server runs at boot, prints breakages/warnings (human or --json), and exits non-zero on any breakage — so an operator can catch a query broken by a schema change without restarting the server. `queries list` prints each registered query's name, MCP exposure, and typed params. Named `validate` (not `check`) to avoid overlap with the existing `omnigraph lint` — `query check`/`query lint` are already deprecated argv-shims to `lint`. Registry entries resolve like the server: a named graph uses its per-graph `queries:`; otherwise the top-level one. - Queries subcommand group; reuses QueryRegistry::load + check from omnigraph-server; local-only (needs the schema), mirrors lint - tests: clean registry exits 0, broken query exits non-zero + names it, list shows the query and its typed params Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Route registry selection through one shared query_entries_for The "which queries: block applies for graph X" rule existed twice — the server boot path and the CLI's registry_entries — and had already drifted: the CLI carried an unreachable unwrap_or_else fallback the server lacked. Add OmnigraphConfig::query_entries_for(graph: Option<&str>) as the single definition (named graph -> its per-graph block; otherwise top-level) and route all three sites through it: server single mode, server multi-graph loop, and the CLI. The CLI's dead fallback arm is deleted; CLI and server now resolve identically by construction. No behavior change. Extends the config round-trip test to pin the selector, including the unknown-name -> top-level fallback the deleted CLI arm covered. * Funnel registry validation through one validate_and_attach gate The check -> refuse-on-breakage -> log-warnings -> empty->None block was copy-pasted across both open paths (single mode and the multi-graph per-graph open), differing only by the graph label. A third opener could attach a registry that was never schema-checked. Extract validate_and_attach(queries, catalog, label) -> Option<Arc<..>> as the single gate both paths call, so attaching an unchecked registry is no longer expressible. The catalog handle is an owned Arc, so calling it before the multi-mode policy match (which rebinds db) is borrow-clean. No behavior change. Adds a direct unit test of the helper (empty / clean / breakage incl. the graph label in the message) — covering the multi-graph path's logic, which previously had no boot-refusal coverage. * Resolve param types structurally in the MCP vector lint The exposed-query advisory detected vector params with type_name.starts_with("Vector(") — a second copy of the compiler's own ScalarType::from_str_name vector parsing that could drift from it. Key the lint off PropType::from_param_type_name + ScalarType::Vector(_) instead, the one canonical resolver the type system already uses. Any future param-suppliability lint now reads the structured type rather than scanning the surface string. Behavior-preserving: the grammar forbids list-of-vector params (list_type = "[" base_type "]", and base_type excludes Vector), so the only input where the structured and string checks could differ is unparseable. Adds a guard test that an exposed String param does not false-trigger the warning. * Refuse duplicate MCP tool names across exposed stored queries The effective MCP tool name (explicit tool_name, else the query name) is a second identity namespace beside the registry key, but nothing enforced it unique — two exposed queries could claim one catalog key, and each consumer re-derived the name ad hoc. Add StoredQuery::effective_tool_name() as the one definition, and a load-time uniqueness pass in from_specs over exposed queries: a collision is a collected LoadError naming the loser and the winner. Scoped to exposed queries (unexposed have no MCP tool); deterministic over the BTreeMap so the first-declared wins and the error order is stable. New (rare) refusal: a config with colliding exposed tool names now fails `omnigraph queries validate` offline and refuses server boot, the same posture as a malformed registry. Release-note-worthy. Test-first: duplicate_exposed_tool_name_is_a_load_error (red before the pass, green after) + a CLI offline test; the unexposed sibling pins the exposed-only scope; effective_tool_name asserts folded into the load test. * docs: document the queries registry, CLI, and invoke_query action The stored-query surface shipped without user docs. Add it, per the same-PR maintenance contract: - policy.md: invoke_query as per-graph action #10 (branch-scoped), with the double-gating note; renumber graph_list; add it to the branch_scope list. - cli-reference.md: the `queries validate | list` command, and the `queries:` config block (per-graph + top-level) with mcp.expose/tool_name and the tool-name uniqueness rule. - server.md: boot-time stored-query type-check (refuse on breakage), noting invocation over HTTP/MCP is not yet exposed. * Add POST /queries/{name} stored-query invocation handler Invoke a curated server-side stored query by name: source + name come from the per-graph queries: registry, the client sends only runtime inputs (params, branch, snapshot). Gated by the invoke_query Cedar action at the boundary; the handler delegates to the existing run_query/run_mutate, whose inner Read/Change enforce still runs — so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). - InvokeStoredQueryRequest + an untagged InvokeStoredQueryResponse { Read(ReadOutput), Change(ChangeOutput) } → one Json<_> return type and a oneOf 200 schema (a correct contract, not a wrong-but-simple one). - Route lives in per_graph_protected → single-mode /queries/{name} and multi-mode /graphs/{id}/queries/{name} for free. - Deny == unknown: an invoke_query denial and a missing query both return the same 404, so the catalog can't be probed by an unauthorized caller. - OpenAPI regenerated; tests cover read, mutation double-gate (403 vs 200), bad-param 400, and the identical-404 deny path. Completes the MR-969 V1 invocation slice (registry + /queries/{name} + invoke_query). * docs: stored-query invocation endpoint; flip the not-yet-exposed caveat Now that POST /queries/{name} ships (C7), document it: add the endpoint to server.md's inventory + an invocation section (body, untagged read/mutate envelope, invoke_query gate, double-gated mutations, deny == 404), and flip the startup note that said invocation was not yet exposed. In policy.md, replace "no invocation call site yet" on the invoke_query action with a pointer to the endpoint. * Scope the stored-query 404-hiding claim to non-invoke_query callers Review found the deny==404 catalog-hiding was overstated as a contract: it holds only at the outer invoke_query gate. A caller that HOLDS invoke_query but lacks read/change gets the inner gate's 403 for an existing query vs 404 for an unknown one — so existence is visible to grant-holders by design (the intended double-gate). The handler docstring, OpenAPI 404 description, and server.md all claimed the 404 was airtight against any denied actor. Correct the wording in all three (no behavior change) and add the missing symmetric test (invoke_query but no read -> 403 for an existing query, 404 for unknown) so the actual contract is pinned. Also document that in default-deny mode (tokens, no policy) every invocation 404s until an invoke_query rule is configured. Nits: the from_specs collision comment said "first declared wins" but it is lexicographically-first by name (BTreeMap); the effective_tool_name docstring overclaimed the CLI display routes through it (it resolves the rule on its own output DTO). * Default mcp.expose to true (the manifest entry is the opt-in) expose controls MCP-catalog membership only — it is not an authorization gate (invocation is gated by invoke_query regardless). So requiring a per-query mcp.expose: true was friction with no safety benefit: a non-exposed query is still HTTP-invocable by name. Flip the default so declaring a query in the manifest exposes it to the agent tool catalog by default; expose: false is the escape hatch for service-only queries. Both the absent-mcp path (Default impl) and the present-but-no-expose path (serde default fn) now yield true. Doc comments + cli-reference updated; the config round-trip test asserts the new default. * Add GET /queries stored-query catalog endpoint List a graph's mcp.expose stored queries as a typed tool catalog so a client (the MCP server) can register them as tools without fetching .gq source. Each entry carries name, MCP tool_name, description/instruction, a read/mutate flag, and decomposed typed params (kind enum: string|bool|int| bigint|float|date|datetime|blob|vector|list, plus item_kind for lists and vector_dim) — so the consumer builds an input schema with a closed match and never re-parses omnigraph type spelling. I64/U64 are bigint (string on the wire): a JSON number loses precision past 2^53 and the engine already accepts decimal strings. Read-gated (works in default-deny; the catalog is graph-wide, authorized against main). NOT Cedar-filtered per query yet — a reader can list a query whose invoke_query they lack (documented gap until per-query authz lands); invocation stays invoke_query-gated + deny==404. - api: QueriesCatalogOutput / QueryCatalogEntry / ParamDescriptor / ParamKind + query_catalog_entry (reuses PropType::from_param_type_name; scalar_kind is exhaustive, so a new ScalarType is a compile error here until catalogued). - GET /queries route in per_graph_protected (→ /graphs/{id}/queries in multi mode); OpenAPI regenerated; path allowlists updated. - Tests: projection unit (every kind, list, vector, nullable, mutation, empty) + handler (exposed-only filter, read-gate probe-oracle, empty registry). * docs: GET /queries stored-query catalog endpoint Document the catalog: the endpoint table row (GET /queries, read-gated), a catalog section (typed-param kind enum, bigint/date/datetime/blob-as-string, graph-wide/branch-independent, mcp.expose default true, the read-gated probe-oracle gap), and flip the startup note now that the catalog ships. * Collect file-I/O and parse errors in QueryRegistry::load in one pass load() early-returned on any unreadable .gq file, masking parse / identity / tool-name-collision errors in the OTHER (readable) files — so an operator fixed the missing file, restarted, and only then saw the next broken query. Now it collects I/O errors but still runs from_specs on the readable specs and returns the union, so every broken entry surfaces at once (matching the collected-errors contract the rest of the registry already follows). Safe: from_specs' tool-name collision check runs over loaded queries only, so dropping an I/O-failed entry can only under-report a collision, never invent one. I/O errors are ordered first (BTreeMap key order), then spec errors. Adds a load-level test (tempdir: a valid, a missing, and a parse-broken .gq) asserting all three surface in one Err — confirmed red before the fix. * Make invoke_query graph-scoped (one branch authority) invoke_query gates reaching the curated stored-query surface — a graph-level capability. Per-branch/snapshot access is already enforced by the inner read/change gate in run_query/run_mutate (authorized against the resolved branch), so branch-scoping the outer gate was redundant AND wrong for snapshot reads (it defaulted to main). Drop the branch dimension: remove InvokeQuery from uses_branch_scope (it joins admin as graph-scoped) and authorize the boundary gate with branch: None. Lossless: an actor confined to branch X by their read/change rules can still only invoke a stored query that touches X. A rule that sets branch_scope on invoke_query is now rejected by validate() — write invoke_query in its own rule. Ripple (atomic): restructure the server invoke fixture so invoke_query sits in its own branch_scope-free rule; invert invoke_query_is_branch_scoped -> invoke_query_rejects_branch_scope; the per-graph authorize test uses branch: None; docs (policy.md, server.md, the InvokeQuery doc). No wire/OpenAPI change. * Resolve graph config by identity, not server mode Which policy/queries block applies for a graph was decided three different, mode-dependent ways: single-mode boot used top-level even for a named graph; multi-mode used per-graph (and silently ignored a top-level queries block); the CLI used per-graph for a named target. So `queries validate --target prod` could check a different registry than the single-mode server loaded, and a named graph's per-graph policy/queries were silently shadowed. Make config a function of graph IDENTITY: a graph served by NAME (--target/server.graph, a graphs: entry) uses its own graphs.<name>.{policy, queries}; a bare URI is anonymous and uses top-level. One rule, applied by single-mode boot, multi-mode boot, and the CLI — so they can't diverge and the CLI predicts the server exactly. No silent ignore: serving a named graph while a top-level policy/queries block is populated now refuses boot, naming the block (the multi-mode top-level-policy bail, extended to queries and to single-mode-named). The CLI's `queries validate` derives the schema URI and the registry from ONE selection, and a positional URI forces anonymous (ignoring cli.graph) so the two can't come from different graphs. BREAKING (released behavior): single mode by name (--target/server.graph) with top-level policy/queries previously used top-level; it now uses the per-graph block and refuses boot if top-level is also populated. Bare-URI single mode is unchanged. Loud, with migration text pointing at graphs.<name>. - config: resolve_policy_file_for (policy sibling of query_entries_for, no top-level fallback) + populated_top_level_blocks for the coherence check. - characterization tests (single-mode named -> per-graph; named + top-level -> bail; multi-mode top-level queries -> bail; CLI positional-URI -> top-level). - docs: policy.md, server.md, cli-reference.md. * docs: RFC-002 credentials keyed by server name (keychain/profile/env) Reworks the RFC's credentials model: secrets are keyed by server name — OS keychain `omnigraph:<server>` (preferred) -> a `[<server>]` profile in `~/.omnigraph/credentials` -> `OMNIGRAPH_TOKEN[_<SERVER>]` env (CI), the AWS/gh/kube model. `servers.<name>` is endpoint-only by default but may carry an explicit, secret-free `auth: { token: { env|file|command|keychain } }` source. The shipped `bearer_token_env` + `.env.omni` dotenv remain a legacy compat path; no `credentials.yaml`. * docs: RFC-002 — typed graph locator (storage/server/graph_id), not a uri string Add §1.1: the resolved graph address is a typed GraphLocator (Embedded{storage} | Remote{server, graph_id}), not a flat uri: String. Diagnoses the string model's cost in the code today (~16 is_remote_uri forks, TargetConfig can't express multi-server x multi-graph, the CLI bails on remote, the ts SDK models baseUrl+graphId separately) and settles the YAML naming so the key names the locus: - storage: (embedded) — shipped uri: is a deprecated alias - server: + graph_id: (remote) — graph_id defaults to the entry key - storage xor server, reject both/neither (no silent ambiguity) Kills the graphs:/graph: collision and the uri:-might-be-a-server ambiguity. Updates the §1/§8 examples and the entry-shape notes to the new naming. * Test: queries list must reject an unknown --target queries list opens no graph URI, so unknown-graph validation does not ride along on resolve_target_uri the way it does for every other command. The new test reproduces the gap: with an unknown --target the command currently exits 0 and prints the (empty) top-level registry instead of erroring like the URI-resolving commands do. Fails against current code; the fix follows. * Validate the graph selection in queries list Graph-existence validation was a side effect of URI resolution: every URI-resolving command rejects an unknown --target via resolve_target_uri, but queries list opens no URI, so query_entries_for(Some(unknown)) silently fell back to the top-level registry and showed the wrong (or empty) catalog. Make membership a property of the selection: add the fallible resolve_graph_selection alongside the infallible query_entries_for (a known name passes through, an unknown name errors with the same message as resolve_target_uri, None stays anonymous), and validate the selection in execute_queries_list. query_entries_for is unchanged — server boot's bare-URI path still needs its None -> top-level arm. * Surface policy-engine errors from stored-query invoke The invoke handler mapped every authorize_request failure to 404 ('stored query not found'), which collapsed the authorization decision (deny -> 403) together with operational failures (no actor -> 401, Cedar evaluation error -> 500). A real policy-engine 500 was hidden as a missing query. Separate the two concerns instead of sniffing the masked status. Extract authorize() returning an Authz { Allowed, Denied(msg) } decision and reserve Err for operational failures only; authorize_request becomes a thin wrapper that maps Denied -> 403, so the 16 deny-as-403 callers are unchanged. The invoke handler now matches the decision directly: a denial stays 404 (deny == missing, so the catalog can't be probed without the grant), while a 401/500 propagates with its true status. 500 is now a reachable outcome on POST /queries/{name}; document it in the endpoint responses and regenerate openapi.json. * Extract the named-graph/top-level coherence rule into one helper The rule 'a named graph uses its own graphs.<name> block, so a populated top-level block is a config error' lived inline in single-mode server boot. Extract it to OmnigraphConfig::ensure_top_level_blocks_honored so the same definition can be shared by the CLI selection gate (next commit) and the two can't drift. Boot calls the helper; the message is reworded context-neutral (drops 'serving') so it reads correctly from both boot and the CLI. Behavior-preserving: multi-graph mode keeps its own unconditional check, and single_mode_named_graph_rejects_top_level_blocks still passes. * Test: queries validate/list must reject a named graph with a top-level block Server boot refuses a config where a graph is selected by name yet a top-level queries:/policy.file block is populated (the block would be silently ignored). The CLI's queries validate/list resolve the same named selection but skip that coherence check, so they give a false green / list the per-graph block. The new test reproduces it: validate prints OK and list succeeds where boot would refuse. Fails against current code; the fix follows. * Enforce top-level coherence in the single CLI selection gate queries validate validated graph membership only as a side effect of URI resolution and queries list only via resolve_graph_selection's membership check; neither applied the named-graph/top-level coherence rule server boot enforces, so both gave a false green on a config boot refuses. Fold ensure_top_level_blocks_honored into resolve_graph_selection so it is the single gate that returns only valid + server-coherent selections, and route resolve_selected_graph (queries validate) through it; queries list already calls the gate. A named graph with a populated top-level block now errors in both commands, matching boot. A positional URI stays anonymous (top-level honored), so queries_validate_positional_uri_ignores_default_graph is unaffected. * docs: RFC-003 — MCP server surface for omnigraph-server Detailed MCP-transport design for the stored-query/MCP work, building on the shipped #128 registry. Corrects the draft against the branch head: the coarse invoke_query gate + 404 denial-masking are already wired (server_invoke_query), so per-query invoke_query scope (PolicyRequest has no query-name dimension yet) is the real prerequisite; positions the doc as superseding rfc-001's MCP transport (/mcp/tools+/mcp/invoke) and reconciles the shipped mcp.expose YAML form and the schema-introspection non-goal; grounds the parity surface in the actual omnigraph-ts package (13 tools with read/change ids, 2 resources). * docs(config): clarify graph config boundaries * fix(config): enforce graph-scoped policies and query validation * fix(cli): require graph selection for scoped query registries * fix(server): preserve named graph id in single mode policy * fix(cli): share graph identity for policy resolution * test(cli): cover policy tooling server graph selection * fix(cli): honor server graph for policy tooling --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-01 22:50:31 +02:00
`call_tool` adds no business logic. Reuse points (all in `handlers.rs`):
Stored-query registry foundation + config/CLI RFC-002 (#128) * MR-969: add stored-query registry config surface Introduce the `queries:` block in omnigraph.yaml — an inline `name -> entry` map of stored queries, per-graph (`graphs.<id>.queries`) and top-level for single-graph mode, mirroring how `policy` is wired in both modes. Each entry points at a `.gq` file and carries optional MCP exposure settings (`expose`, `tool_name`), defaulting to not-exposed. Additive: absent `queries:` leaves current behavior unchanged. - QueryEntry { file, mcp: McpSettings { expose, tool_name } } - `queries` field on TargetConfig + OmnigraphConfig (serde default) - query_entries() / target_query_entries() accessors - resolve_query_file() — base_dir-relative `.gq` path resolution - round-trip + absent-block tests Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add stored-query registry loader and GraphHandle wiring Add a `queries` module: QueryRegistry loads each declared `.gq` entry, parses it, and selects the query whose symbol matches the manifest key, asserting the two agree (key == `query <name>` symbol). Identity is the query name; a key/symbol mismatch is a load-time error. Errors are collected, not fail-fast, so a bad registry surfaces every broken entry at once. Schema type-checking is deliberately left to a separate pass so the loader stays callable without an open engine. Thread an `Option<Arc<QueryRegistry>>` through GraphHandle alongside the per-graph policy; the URI-canonicalizing clone propagates it. Production openers default to None for now — the boot path loads and attaches the registry in a later change. - QueryRegistry::{from_specs, load, lookup, iter}; StoredQuery::is_mutation - GraphHandle.queries field, propagated on canonical clone - registry unit tests: identity match/mismatch, multi-query selection, per-entry parse errors, error collection, mutation classification Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: add RFC-002 config & CLI architecture Layered config (user-global ~/.config/omnigraph/ + per-project), a unifying `target` abstraction resolving to (locus, graph, sub-state, credential) with embedded-URI XOR remote-server loci, multi-server × multi-graph client targeting, credentials by-reference, and the file-naming decision: project and server config are one artifact (`omnigraph.yaml`); the only differently-named file is the user-global `config.yaml`, split by scope not role. Includes the 12-factor bind portability rule (prefer --bind/OMNIGRAPH_BIND over a committed server.bind) and the defined-locally / invoked-remotely model for stored queries. Derived from first principles working backwards from what the engine enables; validated against kube/Helix/git/compose. Linked from docs/dev/index.md. Proposed; phased rollout for the MR-973/974/981 family. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add check() to validate stored queries against the live schema A pure check(registry, catalog) that type-checks every stored query via the same typecheck_query_decl the engine runs for inline queries — no parallel implementation. Failures are collected, not fail-fast, so an operator sees every broken query (e.g. a type/property a migration renamed or removed) in one pass. Breakages are fatal (the boot path will refuse to start); warnings are advisory. Pure over (registry, catalog) so it is callable both at boot (engine catalog) and offline from the CLI without an open engine. Advisory lint: an mcp.expose:true query that declares a Vector(N) parameter warns — an LLM cannot supply a raw embedding vector; such a query should take a String parameter and embed server-side. Warns rather than rejects, since service-to-service callers may pass vectors. - CheckReport { breakages, warnings }; has_breakages / is_clean - tests: valid query, unknown type, unknown property, collect-not-fail-fast, vector-param-exposed warns, unexposed silent Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Drop internal plan-label refs from stored-query config comments Doc comments referenced sequencing labels ("C2") that mean nothing to a reader; reword to describe the behavior directly. Comment-only. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile aliases with the role model in RFC-002 Place the existing client-only `aliases:` block in the client/server role split: aliases are client-role (CLI, embedded, ungated) and may live in both user-global and project config; `queries:` is server-role (deployment manifest only). They overlap as "name -> .gq"; `queries:` is the superset, and the end-state subsumes aliases (definition -> queries, target/branch/format -> client invocation context, positional args -> CLI sugar). v1 keeps aliases unchanged. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: make RFC-002 config global-first, project-optional The global user config is the primary, self-sufficient default; the CLI works from any directory with no project file (the kubectl/aws/gh posture), a deliberate flip from today's project-anchored behavior. The project omnigraph.yaml becomes an optional repo-scoped override and the deployment manifest. Uniform schema, both layers optional; global can hold any section including a personal server's graphs/queries. Additive: project still overrides global; the flip adds a fallback layer below the project file rather than removing it. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: justify XDG ~/.config/omnigraph over legacy ~/.omnigraph in RFC-002 Make the rationale explicit: XDG-first because OmniGraph is a client that will cache remote catalogs and keep session state alongside secrets, and XDG separates config / cache / state into distinct dirs (clear cache without touching creds; backups skip cache) whereas a single ~/.omnigraph/ mixes them. Honor ~/.omnigraph/ as a fallback for the peer-group (aws/kube/docker/helix) expectation. Add XDG_CACHE_HOME / XDG_STATE_HOME to the override precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: build RFC-002 credentials on the existing env-file mechanism OmniGraph already has credentials-by-reference: bearer_token_env names the env var, and auth.env_file is a git-ignored dotenv the CLI auto-loads (real env vars win), resolved via resolve_remote_bearer_token. The RFC's proposed credentials.yaml + token_env were redundant parallel inventions. Reconcile: reuse bearer_token_env (extend to servers.<name>) and auth.env_file (add a global ~/.config/omnigraph/.env layered under the project .env.omni); OS keychain is an additive future resolver. No new credentials.yaml. Updated summary, non-goals, background, file-naming, credentials, example, login, migration, rollout. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: use single ~/.omnigraph dir (Helix-style), not XDG, in RFC-002 Reverse the earlier XDG-first call. The prior argument rested on a false dichotomy (single-dir => mixed config/cache/state); in fact the peer tools (aws, kube, helix) achieve separation via SUBDIRECTORIES inside one ~/.tool/ dir (~/.aws/sso/cache/, ~/.kube/cache/), getting cache hygiene AND one discoverable place. So everything goes under ~/.omnigraph/: config.yaml, credentials (dotenv, 0600), cache/, state/. Lower cognitive load, matches what DB/cloud-CLI users expect, matches Helix. OMNIGRAPH_HOME overrides; $XDG_CONFIG_HOME optionally honored but ~/.omnigraph/ is canonical. Updated all paths, the rationale paragraph, the file-naming table (added a cache/state row), and env precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile RFC-002 with shipped/planned CLI tickets Align with reality found in existing tickets: - Noun is graph/graphs, not target/targets (MR-603 done renamed the config key targets->graphs, flag --graph). Use graphs:/--graph; an entry is embedded (uri) XOR remote (server + remote graph name). - ~/.omnigraph/ confirmed by MR-581 (og template pull, done) which already quick-starts templates there. - Templates already exist (MR-581/MR-531) — not invented here. - The init family is already specced (init, quickstart MR-973, serve MR-970, prune MR-972, mcp install MR-974, agent-mode MR-981); this RFC only adds the user route (~/.omnigraph/config.yaml + login). - aliases: -> operations: planned (MR-839). - bearer_token_env gap tracked in MR-971. - query lint/check already exist (MR-639) — registry validator must not collide with the singular `query check`. Add a Reconciliation section; fix the canonical example to graphs:/--graph. Also: merge semantics refined (deep-merge settings, replace named entries, replace lists, config view --resolved --show-origin). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: correct stale-ticket claims and fold init/bootstrap design into RFC-002 Verify against code, not ticket statuses (MR-581 is marked done but is stale/unbuilt): no ~/.omnigraph usage, no template/serve/quickstart/ prune/login commands exist; config still uses aliases: (no operations:). So ~/.omnigraph/ stands on peer-convention merits alone, and templates are a design question, not a foothold. Add §7.5: the three-tier init model (user route = login + ~/.omnigraph/config.yaml; thin project init; fat quickstart + templates) with first-principles positions (split init/login, in-place refuse-if-exists, interactive vs --auto/agent-mode, --template flag, secrets-on-scaffold gitignore rule). This RFC owns only the user route; the rest are sibling tickets (MR-973/970/972/974/981). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: breadboard + slice Shape A in RFC-002 Add the implementation breadboard (places P1-P5, affordances N1-N14 with NEW markers, mermaid) and five vertical slices for the selected config/ CLI/init shape: V1 global layer + merge engine + config view; V2 remote graphs + HTTP-client path + credential resolution; V3 omnigraph login; V4 init-hardening + quickstart + templates (rides MR-970); V5 agent-mode (MR-981). Rollout reordered to the slice sequence; spikes X1-X4 gate their owning slice. V1-V2 close the substantive client->server gap. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add InvokeQuery Cedar action (coarse, graph-scoped) A per-graph, branch-scoped action that gates invoking a server-side stored query by name. Coarse for now: an `invoke_query` allow rule permits any stored query on the graph; a future, additive refinement adds an optional per-query-name scope without changing rules written against the coarse action. Enforcement is at the HTTP boundary; the engine `_as` writers still enforce read/change per the query body, so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). No call site yet — the invocation handler wires it in a later change (same pattern as Admin/GraphList added ahead of consumers). - variant + as_str/resource_kind(Graph)/FromStr/uses_branch_scope - Cedar schema: invoke_query appliesTo Graph - tests: per-graph allow/deny, branch-scope accepted Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Load and type-check stored queries at server boot, refusing breakage At startup the server now loads each graph's stored-query registry, type-checks every query against that graph's live schema, and refuses to boot if any query references a type/property the schema doesn't have (same posture as bad policy YAML) — so schema drift surfaces at the deploy boundary, not silently at invocation. Non-blocking warnings are logged. The validated registry is attached to the GraphHandle (the two production sites previously held `queries: None`). Loading (parse + key==symbol identity) happens at settings-build time where the config is in scope; the schema type-check happens after each engine opens (single mode in `open_single_with_queries`, multi mode in `open_single_graph`). `open_with_bearer_tokens_and_policy` delegates with an empty registry so its 18 test callers are unchanged; the public `new_*` constructors are unchanged (only the private build path threads the registry). - ServerConfigMode::Single / GraphStartupConfig carry the loaded registry - boot tests: valid registry boots; type-broken query refuses boot + names it Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add `omnigraph queries validate` and `queries list` CLI `queries validate` type-checks the stored-query registry against the live schema offline — it opens the selected graph, runs the same check() the server runs at boot, prints breakages/warnings (human or --json), and exits non-zero on any breakage — so an operator can catch a query broken by a schema change without restarting the server. `queries list` prints each registered query's name, MCP exposure, and typed params. Named `validate` (not `check`) to avoid overlap with the existing `omnigraph lint` — `query check`/`query lint` are already deprecated argv-shims to `lint`. Registry entries resolve like the server: a named graph uses its per-graph `queries:`; otherwise the top-level one. - Queries subcommand group; reuses QueryRegistry::load + check from omnigraph-server; local-only (needs the schema), mirrors lint - tests: clean registry exits 0, broken query exits non-zero + names it, list shows the query and its typed params Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Route registry selection through one shared query_entries_for The "which queries: block applies for graph X" rule existed twice — the server boot path and the CLI's registry_entries — and had already drifted: the CLI carried an unreachable unwrap_or_else fallback the server lacked. Add OmnigraphConfig::query_entries_for(graph: Option<&str>) as the single definition (named graph -> its per-graph block; otherwise top-level) and route all three sites through it: server single mode, server multi-graph loop, and the CLI. The CLI's dead fallback arm is deleted; CLI and server now resolve identically by construction. No behavior change. Extends the config round-trip test to pin the selector, including the unknown-name -> top-level fallback the deleted CLI arm covered. * Funnel registry validation through one validate_and_attach gate The check -> refuse-on-breakage -> log-warnings -> empty->None block was copy-pasted across both open paths (single mode and the multi-graph per-graph open), differing only by the graph label. A third opener could attach a registry that was never schema-checked. Extract validate_and_attach(queries, catalog, label) -> Option<Arc<..>> as the single gate both paths call, so attaching an unchecked registry is no longer expressible. The catalog handle is an owned Arc, so calling it before the multi-mode policy match (which rebinds db) is borrow-clean. No behavior change. Adds a direct unit test of the helper (empty / clean / breakage incl. the graph label in the message) — covering the multi-graph path's logic, which previously had no boot-refusal coverage. * Resolve param types structurally in the MCP vector lint The exposed-query advisory detected vector params with type_name.starts_with("Vector(") — a second copy of the compiler's own ScalarType::from_str_name vector parsing that could drift from it. Key the lint off PropType::from_param_type_name + ScalarType::Vector(_) instead, the one canonical resolver the type system already uses. Any future param-suppliability lint now reads the structured type rather than scanning the surface string. Behavior-preserving: the grammar forbids list-of-vector params (list_type = "[" base_type "]", and base_type excludes Vector), so the only input where the structured and string checks could differ is unparseable. Adds a guard test that an exposed String param does not false-trigger the warning. * Refuse duplicate MCP tool names across exposed stored queries The effective MCP tool name (explicit tool_name, else the query name) is a second identity namespace beside the registry key, but nothing enforced it unique — two exposed queries could claim one catalog key, and each consumer re-derived the name ad hoc. Add StoredQuery::effective_tool_name() as the one definition, and a load-time uniqueness pass in from_specs over exposed queries: a collision is a collected LoadError naming the loser and the winner. Scoped to exposed queries (unexposed have no MCP tool); deterministic over the BTreeMap so the first-declared wins and the error order is stable. New (rare) refusal: a config with colliding exposed tool names now fails `omnigraph queries validate` offline and refuses server boot, the same posture as a malformed registry. Release-note-worthy. Test-first: duplicate_exposed_tool_name_is_a_load_error (red before the pass, green after) + a CLI offline test; the unexposed sibling pins the exposed-only scope; effective_tool_name asserts folded into the load test. * docs: document the queries registry, CLI, and invoke_query action The stored-query surface shipped without user docs. Add it, per the same-PR maintenance contract: - policy.md: invoke_query as per-graph action #10 (branch-scoped), with the double-gating note; renumber graph_list; add it to the branch_scope list. - cli-reference.md: the `queries validate | list` command, and the `queries:` config block (per-graph + top-level) with mcp.expose/tool_name and the tool-name uniqueness rule. - server.md: boot-time stored-query type-check (refuse on breakage), noting invocation over HTTP/MCP is not yet exposed. * Add POST /queries/{name} stored-query invocation handler Invoke a curated server-side stored query by name: source + name come from the per-graph queries: registry, the client sends only runtime inputs (params, branch, snapshot). Gated by the invoke_query Cedar action at the boundary; the handler delegates to the existing run_query/run_mutate, whose inner Read/Change enforce still runs — so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). - InvokeStoredQueryRequest + an untagged InvokeStoredQueryResponse { Read(ReadOutput), Change(ChangeOutput) } → one Json<_> return type and a oneOf 200 schema (a correct contract, not a wrong-but-simple one). - Route lives in per_graph_protected → single-mode /queries/{name} and multi-mode /graphs/{id}/queries/{name} for free. - Deny == unknown: an invoke_query denial and a missing query both return the same 404, so the catalog can't be probed by an unauthorized caller. - OpenAPI regenerated; tests cover read, mutation double-gate (403 vs 200), bad-param 400, and the identical-404 deny path. Completes the MR-969 V1 invocation slice (registry + /queries/{name} + invoke_query). * docs: stored-query invocation endpoint; flip the not-yet-exposed caveat Now that POST /queries/{name} ships (C7), document it: add the endpoint to server.md's inventory + an invocation section (body, untagged read/mutate envelope, invoke_query gate, double-gated mutations, deny == 404), and flip the startup note that said invocation was not yet exposed. In policy.md, replace "no invocation call site yet" on the invoke_query action with a pointer to the endpoint. * Scope the stored-query 404-hiding claim to non-invoke_query callers Review found the deny==404 catalog-hiding was overstated as a contract: it holds only at the outer invoke_query gate. A caller that HOLDS invoke_query but lacks read/change gets the inner gate's 403 for an existing query vs 404 for an unknown one — so existence is visible to grant-holders by design (the intended double-gate). The handler docstring, OpenAPI 404 description, and server.md all claimed the 404 was airtight against any denied actor. Correct the wording in all three (no behavior change) and add the missing symmetric test (invoke_query but no read -> 403 for an existing query, 404 for unknown) so the actual contract is pinned. Also document that in default-deny mode (tokens, no policy) every invocation 404s until an invoke_query rule is configured. Nits: the from_specs collision comment said "first declared wins" but it is lexicographically-first by name (BTreeMap); the effective_tool_name docstring overclaimed the CLI display routes through it (it resolves the rule on its own output DTO). * Default mcp.expose to true (the manifest entry is the opt-in) expose controls MCP-catalog membership only — it is not an authorization gate (invocation is gated by invoke_query regardless). So requiring a per-query mcp.expose: true was friction with no safety benefit: a non-exposed query is still HTTP-invocable by name. Flip the default so declaring a query in the manifest exposes it to the agent tool catalog by default; expose: false is the escape hatch for service-only queries. Both the absent-mcp path (Default impl) and the present-but-no-expose path (serde default fn) now yield true. Doc comments + cli-reference updated; the config round-trip test asserts the new default. * Add GET /queries stored-query catalog endpoint List a graph's mcp.expose stored queries as a typed tool catalog so a client (the MCP server) can register them as tools without fetching .gq source. Each entry carries name, MCP tool_name, description/instruction, a read/mutate flag, and decomposed typed params (kind enum: string|bool|int| bigint|float|date|datetime|blob|vector|list, plus item_kind for lists and vector_dim) — so the consumer builds an input schema with a closed match and never re-parses omnigraph type spelling. I64/U64 are bigint (string on the wire): a JSON number loses precision past 2^53 and the engine already accepts decimal strings. Read-gated (works in default-deny; the catalog is graph-wide, authorized against main). NOT Cedar-filtered per query yet — a reader can list a query whose invoke_query they lack (documented gap until per-query authz lands); invocation stays invoke_query-gated + deny==404. - api: QueriesCatalogOutput / QueryCatalogEntry / ParamDescriptor / ParamKind + query_catalog_entry (reuses PropType::from_param_type_name; scalar_kind is exhaustive, so a new ScalarType is a compile error here until catalogued). - GET /queries route in per_graph_protected (→ /graphs/{id}/queries in multi mode); OpenAPI regenerated; path allowlists updated. - Tests: projection unit (every kind, list, vector, nullable, mutation, empty) + handler (exposed-only filter, read-gate probe-oracle, empty registry). * docs: GET /queries stored-query catalog endpoint Document the catalog: the endpoint table row (GET /queries, read-gated), a catalog section (typed-param kind enum, bigint/date/datetime/blob-as-string, graph-wide/branch-independent, mcp.expose default true, the read-gated probe-oracle gap), and flip the startup note now that the catalog ships. * Collect file-I/O and parse errors in QueryRegistry::load in one pass load() early-returned on any unreadable .gq file, masking parse / identity / tool-name-collision errors in the OTHER (readable) files — so an operator fixed the missing file, restarted, and only then saw the next broken query. Now it collects I/O errors but still runs from_specs on the readable specs and returns the union, so every broken entry surfaces at once (matching the collected-errors contract the rest of the registry already follows). Safe: from_specs' tool-name collision check runs over loaded queries only, so dropping an I/O-failed entry can only under-report a collision, never invent one. I/O errors are ordered first (BTreeMap key order), then spec errors. Adds a load-level test (tempdir: a valid, a missing, and a parse-broken .gq) asserting all three surface in one Err — confirmed red before the fix. * Make invoke_query graph-scoped (one branch authority) invoke_query gates reaching the curated stored-query surface — a graph-level capability. Per-branch/snapshot access is already enforced by the inner read/change gate in run_query/run_mutate (authorized against the resolved branch), so branch-scoping the outer gate was redundant AND wrong for snapshot reads (it defaulted to main). Drop the branch dimension: remove InvokeQuery from uses_branch_scope (it joins admin as graph-scoped) and authorize the boundary gate with branch: None. Lossless: an actor confined to branch X by their read/change rules can still only invoke a stored query that touches X. A rule that sets branch_scope on invoke_query is now rejected by validate() — write invoke_query in its own rule. Ripple (atomic): restructure the server invoke fixture so invoke_query sits in its own branch_scope-free rule; invert invoke_query_is_branch_scoped -> invoke_query_rejects_branch_scope; the per-graph authorize test uses branch: None; docs (policy.md, server.md, the InvokeQuery doc). No wire/OpenAPI change. * Resolve graph config by identity, not server mode Which policy/queries block applies for a graph was decided three different, mode-dependent ways: single-mode boot used top-level even for a named graph; multi-mode used per-graph (and silently ignored a top-level queries block); the CLI used per-graph for a named target. So `queries validate --target prod` could check a different registry than the single-mode server loaded, and a named graph's per-graph policy/queries were silently shadowed. Make config a function of graph IDENTITY: a graph served by NAME (--target/server.graph, a graphs: entry) uses its own graphs.<name>.{policy, queries}; a bare URI is anonymous and uses top-level. One rule, applied by single-mode boot, multi-mode boot, and the CLI — so they can't diverge and the CLI predicts the server exactly. No silent ignore: serving a named graph while a top-level policy/queries block is populated now refuses boot, naming the block (the multi-mode top-level-policy bail, extended to queries and to single-mode-named). The CLI's `queries validate` derives the schema URI and the registry from ONE selection, and a positional URI forces anonymous (ignoring cli.graph) so the two can't come from different graphs. BREAKING (released behavior): single mode by name (--target/server.graph) with top-level policy/queries previously used top-level; it now uses the per-graph block and refuses boot if top-level is also populated. Bare-URI single mode is unchanged. Loud, with migration text pointing at graphs.<name>. - config: resolve_policy_file_for (policy sibling of query_entries_for, no top-level fallback) + populated_top_level_blocks for the coherence check. - characterization tests (single-mode named -> per-graph; named + top-level -> bail; multi-mode top-level queries -> bail; CLI positional-URI -> top-level). - docs: policy.md, server.md, cli-reference.md. * docs: RFC-002 credentials keyed by server name (keychain/profile/env) Reworks the RFC's credentials model: secrets are keyed by server name — OS keychain `omnigraph:<server>` (preferred) -> a `[<server>]` profile in `~/.omnigraph/credentials` -> `OMNIGRAPH_TOKEN[_<SERVER>]` env (CI), the AWS/gh/kube model. `servers.<name>` is endpoint-only by default but may carry an explicit, secret-free `auth: { token: { env|file|command|keychain } }` source. The shipped `bearer_token_env` + `.env.omni` dotenv remain a legacy compat path; no `credentials.yaml`. * docs: RFC-002 — typed graph locator (storage/server/graph_id), not a uri string Add §1.1: the resolved graph address is a typed GraphLocator (Embedded{storage} | Remote{server, graph_id}), not a flat uri: String. Diagnoses the string model's cost in the code today (~16 is_remote_uri forks, TargetConfig can't express multi-server x multi-graph, the CLI bails on remote, the ts SDK models baseUrl+graphId separately) and settles the YAML naming so the key names the locus: - storage: (embedded) — shipped uri: is a deprecated alias - server: + graph_id: (remote) — graph_id defaults to the entry key - storage xor server, reject both/neither (no silent ambiguity) Kills the graphs:/graph: collision and the uri:-might-be-a-server ambiguity. Updates the §1/§8 examples and the entry-shape notes to the new naming. * Test: queries list must reject an unknown --target queries list opens no graph URI, so unknown-graph validation does not ride along on resolve_target_uri the way it does for every other command. The new test reproduces the gap: with an unknown --target the command currently exits 0 and prints the (empty) top-level registry instead of erroring like the URI-resolving commands do. Fails against current code; the fix follows. * Validate the graph selection in queries list Graph-existence validation was a side effect of URI resolution: every URI-resolving command rejects an unknown --target via resolve_target_uri, but queries list opens no URI, so query_entries_for(Some(unknown)) silently fell back to the top-level registry and showed the wrong (or empty) catalog. Make membership a property of the selection: add the fallible resolve_graph_selection alongside the infallible query_entries_for (a known name passes through, an unknown name errors with the same message as resolve_target_uri, None stays anonymous), and validate the selection in execute_queries_list. query_entries_for is unchanged — server boot's bare-URI path still needs its None -> top-level arm. * Surface policy-engine errors from stored-query invoke The invoke handler mapped every authorize_request failure to 404 ('stored query not found'), which collapsed the authorization decision (deny -> 403) together with operational failures (no actor -> 401, Cedar evaluation error -> 500). A real policy-engine 500 was hidden as a missing query. Separate the two concerns instead of sniffing the masked status. Extract authorize() returning an Authz { Allowed, Denied(msg) } decision and reserve Err for operational failures only; authorize_request becomes a thin wrapper that maps Denied -> 403, so the 16 deny-as-403 callers are unchanged. The invoke handler now matches the decision directly: a denial stays 404 (deny == missing, so the catalog can't be probed without the grant), while a 401/500 propagates with its true status. 500 is now a reachable outcome on POST /queries/{name}; document it in the endpoint responses and regenerate openapi.json. * Extract the named-graph/top-level coherence rule into one helper The rule 'a named graph uses its own graphs.<name> block, so a populated top-level block is a config error' lived inline in single-mode server boot. Extract it to OmnigraphConfig::ensure_top_level_blocks_honored so the same definition can be shared by the CLI selection gate (next commit) and the two can't drift. Boot calls the helper; the message is reworded context-neutral (drops 'serving') so it reads correctly from both boot and the CLI. Behavior-preserving: multi-graph mode keeps its own unconditional check, and single_mode_named_graph_rejects_top_level_blocks still passes. * Test: queries validate/list must reject a named graph with a top-level block Server boot refuses a config where a graph is selected by name yet a top-level queries:/policy.file block is populated (the block would be silently ignored). The CLI's queries validate/list resolve the same named selection but skip that coherence check, so they give a false green / list the per-graph block. The new test reproduces it: validate prints OK and list succeeds where boot would refuse. Fails against current code; the fix follows. * Enforce top-level coherence in the single CLI selection gate queries validate validated graph membership only as a side effect of URI resolution and queries list only via resolve_graph_selection's membership check; neither applied the named-graph/top-level coherence rule server boot enforces, so both gave a false green on a config boot refuses. Fold ensure_top_level_blocks_honored into resolve_graph_selection so it is the single gate that returns only valid + server-coherent selections, and route resolve_selected_graph (queries validate) through it; queries list already calls the gate. A named graph with a populated top-level block now errors in both commands, matching boot. A positional URI stays anonymous (top-level honored), so queries_validate_positional_uri_ignores_default_graph is unaffected. * docs: RFC-003 — MCP server surface for omnigraph-server Detailed MCP-transport design for the stored-query/MCP work, building on the shipped #128 registry. Corrects the draft against the branch head: the coarse invoke_query gate + 404 denial-masking are already wired (server_invoke_query), so per-query invoke_query scope (PolicyRequest has no query-name dimension yet) is the real prerequisite; positions the doc as superseding rfc-001's MCP transport (/mcp/tools+/mcp/invoke) and reconciles the shipped mcp.expose YAML form and the schema-introspection non-goal; grounds the parity surface in the actual omnigraph-ts package (13 tools with read/change ids, 2 resources). * docs(config): clarify graph config boundaries * fix(config): enforce graph-scoped policies and query validation * fix(cli): require graph selection for scoped query registries * fix(server): preserve named graph id in single mode policy * fix(cli): share graph identity for policy resolution * test(cli): cover policy tooling server graph selection * fix(cli): honor server graph for policy tooling --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-01 22:50:31 +02:00
```rust
pub(crate) enum Authz { Allowed, Denied(String) } // handlers.rs:313
pub(crate) fn authorize(actor: Option<&ResolvedActor>, policy: Option<&PolicyEngine>, request: PolicyRequest) -> Result<Authz, ApiError>; // :334 — Err = operational 401/500
pub(crate) async fn run_query(handle: Arc<GraphHandle>, actor: Option<&ResolvedActor>, query: &str, name: Option<&str>, params_json: Option<&Value>, branch: Option<String>, snapshot: Option<String>, reject_mutations: bool) -> Result<(String, ReadTarget, QueryResult), ApiError>; // :711
pub(crate) async fn run_mutate(state: AppState, handle: Arc<GraphHandle>, actor: Option<&ResolvedActor>, query: &str, name: Option<&str>, params_json: Option<&Value>, branch: String) -> Result<ChangeOutput, ApiError>; // :645
```
Stored-query registry foundation + config/CLI RFC-002 (#128) * MR-969: add stored-query registry config surface Introduce the `queries:` block in omnigraph.yaml — an inline `name -> entry` map of stored queries, per-graph (`graphs.<id>.queries`) and top-level for single-graph mode, mirroring how `policy` is wired in both modes. Each entry points at a `.gq` file and carries optional MCP exposure settings (`expose`, `tool_name`), defaulting to not-exposed. Additive: absent `queries:` leaves current behavior unchanged. - QueryEntry { file, mcp: McpSettings { expose, tool_name } } - `queries` field on TargetConfig + OmnigraphConfig (serde default) - query_entries() / target_query_entries() accessors - resolve_query_file() — base_dir-relative `.gq` path resolution - round-trip + absent-block tests Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add stored-query registry loader and GraphHandle wiring Add a `queries` module: QueryRegistry loads each declared `.gq` entry, parses it, and selects the query whose symbol matches the manifest key, asserting the two agree (key == `query <name>` symbol). Identity is the query name; a key/symbol mismatch is a load-time error. Errors are collected, not fail-fast, so a bad registry surfaces every broken entry at once. Schema type-checking is deliberately left to a separate pass so the loader stays callable without an open engine. Thread an `Option<Arc<QueryRegistry>>` through GraphHandle alongside the per-graph policy; the URI-canonicalizing clone propagates it. Production openers default to None for now — the boot path loads and attaches the registry in a later change. - QueryRegistry::{from_specs, load, lookup, iter}; StoredQuery::is_mutation - GraphHandle.queries field, propagated on canonical clone - registry unit tests: identity match/mismatch, multi-query selection, per-entry parse errors, error collection, mutation classification Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: add RFC-002 config & CLI architecture Layered config (user-global ~/.config/omnigraph/ + per-project), a unifying `target` abstraction resolving to (locus, graph, sub-state, credential) with embedded-URI XOR remote-server loci, multi-server × multi-graph client targeting, credentials by-reference, and the file-naming decision: project and server config are one artifact (`omnigraph.yaml`); the only differently-named file is the user-global `config.yaml`, split by scope not role. Includes the 12-factor bind portability rule (prefer --bind/OMNIGRAPH_BIND over a committed server.bind) and the defined-locally / invoked-remotely model for stored queries. Derived from first principles working backwards from what the engine enables; validated against kube/Helix/git/compose. Linked from docs/dev/index.md. Proposed; phased rollout for the MR-973/974/981 family. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add check() to validate stored queries against the live schema A pure check(registry, catalog) that type-checks every stored query via the same typecheck_query_decl the engine runs for inline queries — no parallel implementation. Failures are collected, not fail-fast, so an operator sees every broken query (e.g. a type/property a migration renamed or removed) in one pass. Breakages are fatal (the boot path will refuse to start); warnings are advisory. Pure over (registry, catalog) so it is callable both at boot (engine catalog) and offline from the CLI without an open engine. Advisory lint: an mcp.expose:true query that declares a Vector(N) parameter warns — an LLM cannot supply a raw embedding vector; such a query should take a String parameter and embed server-side. Warns rather than rejects, since service-to-service callers may pass vectors. - CheckReport { breakages, warnings }; has_breakages / is_clean - tests: valid query, unknown type, unknown property, collect-not-fail-fast, vector-param-exposed warns, unexposed silent Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Drop internal plan-label refs from stored-query config comments Doc comments referenced sequencing labels ("C2") that mean nothing to a reader; reword to describe the behavior directly. Comment-only. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile aliases with the role model in RFC-002 Place the existing client-only `aliases:` block in the client/server role split: aliases are client-role (CLI, embedded, ungated) and may live in both user-global and project config; `queries:` is server-role (deployment manifest only). They overlap as "name -> .gq"; `queries:` is the superset, and the end-state subsumes aliases (definition -> queries, target/branch/format -> client invocation context, positional args -> CLI sugar). v1 keeps aliases unchanged. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: make RFC-002 config global-first, project-optional The global user config is the primary, self-sufficient default; the CLI works from any directory with no project file (the kubectl/aws/gh posture), a deliberate flip from today's project-anchored behavior. The project omnigraph.yaml becomes an optional repo-scoped override and the deployment manifest. Uniform schema, both layers optional; global can hold any section including a personal server's graphs/queries. Additive: project still overrides global; the flip adds a fallback layer below the project file rather than removing it. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: justify XDG ~/.config/omnigraph over legacy ~/.omnigraph in RFC-002 Make the rationale explicit: XDG-first because OmniGraph is a client that will cache remote catalogs and keep session state alongside secrets, and XDG separates config / cache / state into distinct dirs (clear cache without touching creds; backups skip cache) whereas a single ~/.omnigraph/ mixes them. Honor ~/.omnigraph/ as a fallback for the peer-group (aws/kube/docker/helix) expectation. Add XDG_CACHE_HOME / XDG_STATE_HOME to the override precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: build RFC-002 credentials on the existing env-file mechanism OmniGraph already has credentials-by-reference: bearer_token_env names the env var, and auth.env_file is a git-ignored dotenv the CLI auto-loads (real env vars win), resolved via resolve_remote_bearer_token. The RFC's proposed credentials.yaml + token_env were redundant parallel inventions. Reconcile: reuse bearer_token_env (extend to servers.<name>) and auth.env_file (add a global ~/.config/omnigraph/.env layered under the project .env.omni); OS keychain is an additive future resolver. No new credentials.yaml. Updated summary, non-goals, background, file-naming, credentials, example, login, migration, rollout. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: use single ~/.omnigraph dir (Helix-style), not XDG, in RFC-002 Reverse the earlier XDG-first call. The prior argument rested on a false dichotomy (single-dir => mixed config/cache/state); in fact the peer tools (aws, kube, helix) achieve separation via SUBDIRECTORIES inside one ~/.tool/ dir (~/.aws/sso/cache/, ~/.kube/cache/), getting cache hygiene AND one discoverable place. So everything goes under ~/.omnigraph/: config.yaml, credentials (dotenv, 0600), cache/, state/. Lower cognitive load, matches what DB/cloud-CLI users expect, matches Helix. OMNIGRAPH_HOME overrides; $XDG_CONFIG_HOME optionally honored but ~/.omnigraph/ is canonical. Updated all paths, the rationale paragraph, the file-naming table (added a cache/state row), and env precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile RFC-002 with shipped/planned CLI tickets Align with reality found in existing tickets: - Noun is graph/graphs, not target/targets (MR-603 done renamed the config key targets->graphs, flag --graph). Use graphs:/--graph; an entry is embedded (uri) XOR remote (server + remote graph name). - ~/.omnigraph/ confirmed by MR-581 (og template pull, done) which already quick-starts templates there. - Templates already exist (MR-581/MR-531) — not invented here. - The init family is already specced (init, quickstart MR-973, serve MR-970, prune MR-972, mcp install MR-974, agent-mode MR-981); this RFC only adds the user route (~/.omnigraph/config.yaml + login). - aliases: -> operations: planned (MR-839). - bearer_token_env gap tracked in MR-971. - query lint/check already exist (MR-639) — registry validator must not collide with the singular `query check`. Add a Reconciliation section; fix the canonical example to graphs:/--graph. Also: merge semantics refined (deep-merge settings, replace named entries, replace lists, config view --resolved --show-origin). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: correct stale-ticket claims and fold init/bootstrap design into RFC-002 Verify against code, not ticket statuses (MR-581 is marked done but is stale/unbuilt): no ~/.omnigraph usage, no template/serve/quickstart/ prune/login commands exist; config still uses aliases: (no operations:). So ~/.omnigraph/ stands on peer-convention merits alone, and templates are a design question, not a foothold. Add §7.5: the three-tier init model (user route = login + ~/.omnigraph/config.yaml; thin project init; fat quickstart + templates) with first-principles positions (split init/login, in-place refuse-if-exists, interactive vs --auto/agent-mode, --template flag, secrets-on-scaffold gitignore rule). This RFC owns only the user route; the rest are sibling tickets (MR-973/970/972/974/981). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: breadboard + slice Shape A in RFC-002 Add the implementation breadboard (places P1-P5, affordances N1-N14 with NEW markers, mermaid) and five vertical slices for the selected config/ CLI/init shape: V1 global layer + merge engine + config view; V2 remote graphs + HTTP-client path + credential resolution; V3 omnigraph login; V4 init-hardening + quickstart + templates (rides MR-970); V5 agent-mode (MR-981). Rollout reordered to the slice sequence; spikes X1-X4 gate their owning slice. V1-V2 close the substantive client->server gap. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add InvokeQuery Cedar action (coarse, graph-scoped) A per-graph, branch-scoped action that gates invoking a server-side stored query by name. Coarse for now: an `invoke_query` allow rule permits any stored query on the graph; a future, additive refinement adds an optional per-query-name scope without changing rules written against the coarse action. Enforcement is at the HTTP boundary; the engine `_as` writers still enforce read/change per the query body, so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). No call site yet — the invocation handler wires it in a later change (same pattern as Admin/GraphList added ahead of consumers). - variant + as_str/resource_kind(Graph)/FromStr/uses_branch_scope - Cedar schema: invoke_query appliesTo Graph - tests: per-graph allow/deny, branch-scope accepted Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Load and type-check stored queries at server boot, refusing breakage At startup the server now loads each graph's stored-query registry, type-checks every query against that graph's live schema, and refuses to boot if any query references a type/property the schema doesn't have (same posture as bad policy YAML) — so schema drift surfaces at the deploy boundary, not silently at invocation. Non-blocking warnings are logged. The validated registry is attached to the GraphHandle (the two production sites previously held `queries: None`). Loading (parse + key==symbol identity) happens at settings-build time where the config is in scope; the schema type-check happens after each engine opens (single mode in `open_single_with_queries`, multi mode in `open_single_graph`). `open_with_bearer_tokens_and_policy` delegates with an empty registry so its 18 test callers are unchanged; the public `new_*` constructors are unchanged (only the private build path threads the registry). - ServerConfigMode::Single / GraphStartupConfig carry the loaded registry - boot tests: valid registry boots; type-broken query refuses boot + names it Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add `omnigraph queries validate` and `queries list` CLI `queries validate` type-checks the stored-query registry against the live schema offline — it opens the selected graph, runs the same check() the server runs at boot, prints breakages/warnings (human or --json), and exits non-zero on any breakage — so an operator can catch a query broken by a schema change without restarting the server. `queries list` prints each registered query's name, MCP exposure, and typed params. Named `validate` (not `check`) to avoid overlap with the existing `omnigraph lint` — `query check`/`query lint` are already deprecated argv-shims to `lint`. Registry entries resolve like the server: a named graph uses its per-graph `queries:`; otherwise the top-level one. - Queries subcommand group; reuses QueryRegistry::load + check from omnigraph-server; local-only (needs the schema), mirrors lint - tests: clean registry exits 0, broken query exits non-zero + names it, list shows the query and its typed params Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Route registry selection through one shared query_entries_for The "which queries: block applies for graph X" rule existed twice — the server boot path and the CLI's registry_entries — and had already drifted: the CLI carried an unreachable unwrap_or_else fallback the server lacked. Add OmnigraphConfig::query_entries_for(graph: Option<&str>) as the single definition (named graph -> its per-graph block; otherwise top-level) and route all three sites through it: server single mode, server multi-graph loop, and the CLI. The CLI's dead fallback arm is deleted; CLI and server now resolve identically by construction. No behavior change. Extends the config round-trip test to pin the selector, including the unknown-name -> top-level fallback the deleted CLI arm covered. * Funnel registry validation through one validate_and_attach gate The check -> refuse-on-breakage -> log-warnings -> empty->None block was copy-pasted across both open paths (single mode and the multi-graph per-graph open), differing only by the graph label. A third opener could attach a registry that was never schema-checked. Extract validate_and_attach(queries, catalog, label) -> Option<Arc<..>> as the single gate both paths call, so attaching an unchecked registry is no longer expressible. The catalog handle is an owned Arc, so calling it before the multi-mode policy match (which rebinds db) is borrow-clean. No behavior change. Adds a direct unit test of the helper (empty / clean / breakage incl. the graph label in the message) — covering the multi-graph path's logic, which previously had no boot-refusal coverage. * Resolve param types structurally in the MCP vector lint The exposed-query advisory detected vector params with type_name.starts_with("Vector(") — a second copy of the compiler's own ScalarType::from_str_name vector parsing that could drift from it. Key the lint off PropType::from_param_type_name + ScalarType::Vector(_) instead, the one canonical resolver the type system already uses. Any future param-suppliability lint now reads the structured type rather than scanning the surface string. Behavior-preserving: the grammar forbids list-of-vector params (list_type = "[" base_type "]", and base_type excludes Vector), so the only input where the structured and string checks could differ is unparseable. Adds a guard test that an exposed String param does not false-trigger the warning. * Refuse duplicate MCP tool names across exposed stored queries The effective MCP tool name (explicit tool_name, else the query name) is a second identity namespace beside the registry key, but nothing enforced it unique — two exposed queries could claim one catalog key, and each consumer re-derived the name ad hoc. Add StoredQuery::effective_tool_name() as the one definition, and a load-time uniqueness pass in from_specs over exposed queries: a collision is a collected LoadError naming the loser and the winner. Scoped to exposed queries (unexposed have no MCP tool); deterministic over the BTreeMap so the first-declared wins and the error order is stable. New (rare) refusal: a config with colliding exposed tool names now fails `omnigraph queries validate` offline and refuses server boot, the same posture as a malformed registry. Release-note-worthy. Test-first: duplicate_exposed_tool_name_is_a_load_error (red before the pass, green after) + a CLI offline test; the unexposed sibling pins the exposed-only scope; effective_tool_name asserts folded into the load test. * docs: document the queries registry, CLI, and invoke_query action The stored-query surface shipped without user docs. Add it, per the same-PR maintenance contract: - policy.md: invoke_query as per-graph action #10 (branch-scoped), with the double-gating note; renumber graph_list; add it to the branch_scope list. - cli-reference.md: the `queries validate | list` command, and the `queries:` config block (per-graph + top-level) with mcp.expose/tool_name and the tool-name uniqueness rule. - server.md: boot-time stored-query type-check (refuse on breakage), noting invocation over HTTP/MCP is not yet exposed. * Add POST /queries/{name} stored-query invocation handler Invoke a curated server-side stored query by name: source + name come from the per-graph queries: registry, the client sends only runtime inputs (params, branch, snapshot). Gated by the invoke_query Cedar action at the boundary; the handler delegates to the existing run_query/run_mutate, whose inner Read/Change enforce still runs — so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). - InvokeStoredQueryRequest + an untagged InvokeStoredQueryResponse { Read(ReadOutput), Change(ChangeOutput) } → one Json<_> return type and a oneOf 200 schema (a correct contract, not a wrong-but-simple one). - Route lives in per_graph_protected → single-mode /queries/{name} and multi-mode /graphs/{id}/queries/{name} for free. - Deny == unknown: an invoke_query denial and a missing query both return the same 404, so the catalog can't be probed by an unauthorized caller. - OpenAPI regenerated; tests cover read, mutation double-gate (403 vs 200), bad-param 400, and the identical-404 deny path. Completes the MR-969 V1 invocation slice (registry + /queries/{name} + invoke_query). * docs: stored-query invocation endpoint; flip the not-yet-exposed caveat Now that POST /queries/{name} ships (C7), document it: add the endpoint to server.md's inventory + an invocation section (body, untagged read/mutate envelope, invoke_query gate, double-gated mutations, deny == 404), and flip the startup note that said invocation was not yet exposed. In policy.md, replace "no invocation call site yet" on the invoke_query action with a pointer to the endpoint. * Scope the stored-query 404-hiding claim to non-invoke_query callers Review found the deny==404 catalog-hiding was overstated as a contract: it holds only at the outer invoke_query gate. A caller that HOLDS invoke_query but lacks read/change gets the inner gate's 403 for an existing query vs 404 for an unknown one — so existence is visible to grant-holders by design (the intended double-gate). The handler docstring, OpenAPI 404 description, and server.md all claimed the 404 was airtight against any denied actor. Correct the wording in all three (no behavior change) and add the missing symmetric test (invoke_query but no read -> 403 for an existing query, 404 for unknown) so the actual contract is pinned. Also document that in default-deny mode (tokens, no policy) every invocation 404s until an invoke_query rule is configured. Nits: the from_specs collision comment said "first declared wins" but it is lexicographically-first by name (BTreeMap); the effective_tool_name docstring overclaimed the CLI display routes through it (it resolves the rule on its own output DTO). * Default mcp.expose to true (the manifest entry is the opt-in) expose controls MCP-catalog membership only — it is not an authorization gate (invocation is gated by invoke_query regardless). So requiring a per-query mcp.expose: true was friction with no safety benefit: a non-exposed query is still HTTP-invocable by name. Flip the default so declaring a query in the manifest exposes it to the agent tool catalog by default; expose: false is the escape hatch for service-only queries. Both the absent-mcp path (Default impl) and the present-but-no-expose path (serde default fn) now yield true. Doc comments + cli-reference updated; the config round-trip test asserts the new default. * Add GET /queries stored-query catalog endpoint List a graph's mcp.expose stored queries as a typed tool catalog so a client (the MCP server) can register them as tools without fetching .gq source. Each entry carries name, MCP tool_name, description/instruction, a read/mutate flag, and decomposed typed params (kind enum: string|bool|int| bigint|float|date|datetime|blob|vector|list, plus item_kind for lists and vector_dim) — so the consumer builds an input schema with a closed match and never re-parses omnigraph type spelling. I64/U64 are bigint (string on the wire): a JSON number loses precision past 2^53 and the engine already accepts decimal strings. Read-gated (works in default-deny; the catalog is graph-wide, authorized against main). NOT Cedar-filtered per query yet — a reader can list a query whose invoke_query they lack (documented gap until per-query authz lands); invocation stays invoke_query-gated + deny==404. - api: QueriesCatalogOutput / QueryCatalogEntry / ParamDescriptor / ParamKind + query_catalog_entry (reuses PropType::from_param_type_name; scalar_kind is exhaustive, so a new ScalarType is a compile error here until catalogued). - GET /queries route in per_graph_protected (→ /graphs/{id}/queries in multi mode); OpenAPI regenerated; path allowlists updated. - Tests: projection unit (every kind, list, vector, nullable, mutation, empty) + handler (exposed-only filter, read-gate probe-oracle, empty registry). * docs: GET /queries stored-query catalog endpoint Document the catalog: the endpoint table row (GET /queries, read-gated), a catalog section (typed-param kind enum, bigint/date/datetime/blob-as-string, graph-wide/branch-independent, mcp.expose default true, the read-gated probe-oracle gap), and flip the startup note now that the catalog ships. * Collect file-I/O and parse errors in QueryRegistry::load in one pass load() early-returned on any unreadable .gq file, masking parse / identity / tool-name-collision errors in the OTHER (readable) files — so an operator fixed the missing file, restarted, and only then saw the next broken query. Now it collects I/O errors but still runs from_specs on the readable specs and returns the union, so every broken entry surfaces at once (matching the collected-errors contract the rest of the registry already follows). Safe: from_specs' tool-name collision check runs over loaded queries only, so dropping an I/O-failed entry can only under-report a collision, never invent one. I/O errors are ordered first (BTreeMap key order), then spec errors. Adds a load-level test (tempdir: a valid, a missing, and a parse-broken .gq) asserting all three surface in one Err — confirmed red before the fix. * Make invoke_query graph-scoped (one branch authority) invoke_query gates reaching the curated stored-query surface — a graph-level capability. Per-branch/snapshot access is already enforced by the inner read/change gate in run_query/run_mutate (authorized against the resolved branch), so branch-scoping the outer gate was redundant AND wrong for snapshot reads (it defaulted to main). Drop the branch dimension: remove InvokeQuery from uses_branch_scope (it joins admin as graph-scoped) and authorize the boundary gate with branch: None. Lossless: an actor confined to branch X by their read/change rules can still only invoke a stored query that touches X. A rule that sets branch_scope on invoke_query is now rejected by validate() — write invoke_query in its own rule. Ripple (atomic): restructure the server invoke fixture so invoke_query sits in its own branch_scope-free rule; invert invoke_query_is_branch_scoped -> invoke_query_rejects_branch_scope; the per-graph authorize test uses branch: None; docs (policy.md, server.md, the InvokeQuery doc). No wire/OpenAPI change. * Resolve graph config by identity, not server mode Which policy/queries block applies for a graph was decided three different, mode-dependent ways: single-mode boot used top-level even for a named graph; multi-mode used per-graph (and silently ignored a top-level queries block); the CLI used per-graph for a named target. So `queries validate --target prod` could check a different registry than the single-mode server loaded, and a named graph's per-graph policy/queries were silently shadowed. Make config a function of graph IDENTITY: a graph served by NAME (--target/server.graph, a graphs: entry) uses its own graphs.<name>.{policy, queries}; a bare URI is anonymous and uses top-level. One rule, applied by single-mode boot, multi-mode boot, and the CLI — so they can't diverge and the CLI predicts the server exactly. No silent ignore: serving a named graph while a top-level policy/queries block is populated now refuses boot, naming the block (the multi-mode top-level-policy bail, extended to queries and to single-mode-named). The CLI's `queries validate` derives the schema URI and the registry from ONE selection, and a positional URI forces anonymous (ignoring cli.graph) so the two can't come from different graphs. BREAKING (released behavior): single mode by name (--target/server.graph) with top-level policy/queries previously used top-level; it now uses the per-graph block and refuses boot if top-level is also populated. Bare-URI single mode is unchanged. Loud, with migration text pointing at graphs.<name>. - config: resolve_policy_file_for (policy sibling of query_entries_for, no top-level fallback) + populated_top_level_blocks for the coherence check. - characterization tests (single-mode named -> per-graph; named + top-level -> bail; multi-mode top-level queries -> bail; CLI positional-URI -> top-level). - docs: policy.md, server.md, cli-reference.md. * docs: RFC-002 credentials keyed by server name (keychain/profile/env) Reworks the RFC's credentials model: secrets are keyed by server name — OS keychain `omnigraph:<server>` (preferred) -> a `[<server>]` profile in `~/.omnigraph/credentials` -> `OMNIGRAPH_TOKEN[_<SERVER>]` env (CI), the AWS/gh/kube model. `servers.<name>` is endpoint-only by default but may carry an explicit, secret-free `auth: { token: { env|file|command|keychain } }` source. The shipped `bearer_token_env` + `.env.omni` dotenv remain a legacy compat path; no `credentials.yaml`. * docs: RFC-002 — typed graph locator (storage/server/graph_id), not a uri string Add §1.1: the resolved graph address is a typed GraphLocator (Embedded{storage} | Remote{server, graph_id}), not a flat uri: String. Diagnoses the string model's cost in the code today (~16 is_remote_uri forks, TargetConfig can't express multi-server x multi-graph, the CLI bails on remote, the ts SDK models baseUrl+graphId separately) and settles the YAML naming so the key names the locus: - storage: (embedded) — shipped uri: is a deprecated alias - server: + graph_id: (remote) — graph_id defaults to the entry key - storage xor server, reject both/neither (no silent ambiguity) Kills the graphs:/graph: collision and the uri:-might-be-a-server ambiguity. Updates the §1/§8 examples and the entry-shape notes to the new naming. * Test: queries list must reject an unknown --target queries list opens no graph URI, so unknown-graph validation does not ride along on resolve_target_uri the way it does for every other command. The new test reproduces the gap: with an unknown --target the command currently exits 0 and prints the (empty) top-level registry instead of erroring like the URI-resolving commands do. Fails against current code; the fix follows. * Validate the graph selection in queries list Graph-existence validation was a side effect of URI resolution: every URI-resolving command rejects an unknown --target via resolve_target_uri, but queries list opens no URI, so query_entries_for(Some(unknown)) silently fell back to the top-level registry and showed the wrong (or empty) catalog. Make membership a property of the selection: add the fallible resolve_graph_selection alongside the infallible query_entries_for (a known name passes through, an unknown name errors with the same message as resolve_target_uri, None stays anonymous), and validate the selection in execute_queries_list. query_entries_for is unchanged — server boot's bare-URI path still needs its None -> top-level arm. * Surface policy-engine errors from stored-query invoke The invoke handler mapped every authorize_request failure to 404 ('stored query not found'), which collapsed the authorization decision (deny -> 403) together with operational failures (no actor -> 401, Cedar evaluation error -> 500). A real policy-engine 500 was hidden as a missing query. Separate the two concerns instead of sniffing the masked status. Extract authorize() returning an Authz { Allowed, Denied(msg) } decision and reserve Err for operational failures only; authorize_request becomes a thin wrapper that maps Denied -> 403, so the 16 deny-as-403 callers are unchanged. The invoke handler now matches the decision directly: a denial stays 404 (deny == missing, so the catalog can't be probed without the grant), while a 401/500 propagates with its true status. 500 is now a reachable outcome on POST /queries/{name}; document it in the endpoint responses and regenerate openapi.json. * Extract the named-graph/top-level coherence rule into one helper The rule 'a named graph uses its own graphs.<name> block, so a populated top-level block is a config error' lived inline in single-mode server boot. Extract it to OmnigraphConfig::ensure_top_level_blocks_honored so the same definition can be shared by the CLI selection gate (next commit) and the two can't drift. Boot calls the helper; the message is reworded context-neutral (drops 'serving') so it reads correctly from both boot and the CLI. Behavior-preserving: multi-graph mode keeps its own unconditional check, and single_mode_named_graph_rejects_top_level_blocks still passes. * Test: queries validate/list must reject a named graph with a top-level block Server boot refuses a config where a graph is selected by name yet a top-level queries:/policy.file block is populated (the block would be silently ignored). The CLI's queries validate/list resolve the same named selection but skip that coherence check, so they give a false green / list the per-graph block. The new test reproduces it: validate prints OK and list succeeds where boot would refuse. Fails against current code; the fix follows. * Enforce top-level coherence in the single CLI selection gate queries validate validated graph membership only as a side effect of URI resolution and queries list only via resolve_graph_selection's membership check; neither applied the named-graph/top-level coherence rule server boot enforces, so both gave a false green on a config boot refuses. Fold ensure_top_level_blocks_honored into resolve_graph_selection so it is the single gate that returns only valid + server-coherent selections, and route resolve_selected_graph (queries validate) through it; queries list already calls the gate. A named graph with a populated top-level block now errors in both commands, matching boot. A positional URI stays anonymous (top-level honored), so queries_validate_positional_uri_ignores_default_graph is unaffected. * docs: RFC-003 — MCP server surface for omnigraph-server Detailed MCP-transport design for the stored-query/MCP work, building on the shipped #128 registry. Corrects the draft against the branch head: the coarse invoke_query gate + 404 denial-masking are already wired (server_invoke_query), so per-query invoke_query scope (PolicyRequest has no query-name dimension yet) is the real prerequisite; positions the doc as superseding rfc-001's MCP transport (/mcp/tools+/mcp/invoke) and reconciles the shipped mcp.expose YAML form and the schema-introspection non-goal; grounds the parity surface in the actual omnigraph-ts package (13 tools with read/change ids, 2 resources). * docs(config): clarify graph config boundaries * fix(config): enforce graph-scoped policies and query validation * fix(cli): require graph selection for scoped query registries * fix(server): preserve named graph id in single mode policy * fix(cli): share graph identity for policy resolution * test(cli): cover policy tooling server graph selection * fix(cli): honor server graph for policy tooling --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-01 22:50:31 +02:00
`PolicyRequest` carries `{ action, branch, target_branch }` only — **no actor
identity** (server-resolved, supplied separately) and **no query-name dimension**
(the coarse-`invoke_query` caveat):
Stored-query registry foundation + config/CLI RFC-002 (#128) * MR-969: add stored-query registry config surface Introduce the `queries:` block in omnigraph.yaml — an inline `name -> entry` map of stored queries, per-graph (`graphs.<id>.queries`) and top-level for single-graph mode, mirroring how `policy` is wired in both modes. Each entry points at a `.gq` file and carries optional MCP exposure settings (`expose`, `tool_name`), defaulting to not-exposed. Additive: absent `queries:` leaves current behavior unchanged. - QueryEntry { file, mcp: McpSettings { expose, tool_name } } - `queries` field on TargetConfig + OmnigraphConfig (serde default) - query_entries() / target_query_entries() accessors - resolve_query_file() — base_dir-relative `.gq` path resolution - round-trip + absent-block tests Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add stored-query registry loader and GraphHandle wiring Add a `queries` module: QueryRegistry loads each declared `.gq` entry, parses it, and selects the query whose symbol matches the manifest key, asserting the two agree (key == `query <name>` symbol). Identity is the query name; a key/symbol mismatch is a load-time error. Errors are collected, not fail-fast, so a bad registry surfaces every broken entry at once. Schema type-checking is deliberately left to a separate pass so the loader stays callable without an open engine. Thread an `Option<Arc<QueryRegistry>>` through GraphHandle alongside the per-graph policy; the URI-canonicalizing clone propagates it. Production openers default to None for now — the boot path loads and attaches the registry in a later change. - QueryRegistry::{from_specs, load, lookup, iter}; StoredQuery::is_mutation - GraphHandle.queries field, propagated on canonical clone - registry unit tests: identity match/mismatch, multi-query selection, per-entry parse errors, error collection, mutation classification Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: add RFC-002 config & CLI architecture Layered config (user-global ~/.config/omnigraph/ + per-project), a unifying `target` abstraction resolving to (locus, graph, sub-state, credential) with embedded-URI XOR remote-server loci, multi-server × multi-graph client targeting, credentials by-reference, and the file-naming decision: project and server config are one artifact (`omnigraph.yaml`); the only differently-named file is the user-global `config.yaml`, split by scope not role. Includes the 12-factor bind portability rule (prefer --bind/OMNIGRAPH_BIND over a committed server.bind) and the defined-locally / invoked-remotely model for stored queries. Derived from first principles working backwards from what the engine enables; validated against kube/Helix/git/compose. Linked from docs/dev/index.md. Proposed; phased rollout for the MR-973/974/981 family. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add check() to validate stored queries against the live schema A pure check(registry, catalog) that type-checks every stored query via the same typecheck_query_decl the engine runs for inline queries — no parallel implementation. Failures are collected, not fail-fast, so an operator sees every broken query (e.g. a type/property a migration renamed or removed) in one pass. Breakages are fatal (the boot path will refuse to start); warnings are advisory. Pure over (registry, catalog) so it is callable both at boot (engine catalog) and offline from the CLI without an open engine. Advisory lint: an mcp.expose:true query that declares a Vector(N) parameter warns — an LLM cannot supply a raw embedding vector; such a query should take a String parameter and embed server-side. Warns rather than rejects, since service-to-service callers may pass vectors. - CheckReport { breakages, warnings }; has_breakages / is_clean - tests: valid query, unknown type, unknown property, collect-not-fail-fast, vector-param-exposed warns, unexposed silent Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Drop internal plan-label refs from stored-query config comments Doc comments referenced sequencing labels ("C2") that mean nothing to a reader; reword to describe the behavior directly. Comment-only. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile aliases with the role model in RFC-002 Place the existing client-only `aliases:` block in the client/server role split: aliases are client-role (CLI, embedded, ungated) and may live in both user-global and project config; `queries:` is server-role (deployment manifest only). They overlap as "name -> .gq"; `queries:` is the superset, and the end-state subsumes aliases (definition -> queries, target/branch/format -> client invocation context, positional args -> CLI sugar). v1 keeps aliases unchanged. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: make RFC-002 config global-first, project-optional The global user config is the primary, self-sufficient default; the CLI works from any directory with no project file (the kubectl/aws/gh posture), a deliberate flip from today's project-anchored behavior. The project omnigraph.yaml becomes an optional repo-scoped override and the deployment manifest. Uniform schema, both layers optional; global can hold any section including a personal server's graphs/queries. Additive: project still overrides global; the flip adds a fallback layer below the project file rather than removing it. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: justify XDG ~/.config/omnigraph over legacy ~/.omnigraph in RFC-002 Make the rationale explicit: XDG-first because OmniGraph is a client that will cache remote catalogs and keep session state alongside secrets, and XDG separates config / cache / state into distinct dirs (clear cache without touching creds; backups skip cache) whereas a single ~/.omnigraph/ mixes them. Honor ~/.omnigraph/ as a fallback for the peer-group (aws/kube/docker/helix) expectation. Add XDG_CACHE_HOME / XDG_STATE_HOME to the override precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: build RFC-002 credentials on the existing env-file mechanism OmniGraph already has credentials-by-reference: bearer_token_env names the env var, and auth.env_file is a git-ignored dotenv the CLI auto-loads (real env vars win), resolved via resolve_remote_bearer_token. The RFC's proposed credentials.yaml + token_env were redundant parallel inventions. Reconcile: reuse bearer_token_env (extend to servers.<name>) and auth.env_file (add a global ~/.config/omnigraph/.env layered under the project .env.omni); OS keychain is an additive future resolver. No new credentials.yaml. Updated summary, non-goals, background, file-naming, credentials, example, login, migration, rollout. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: use single ~/.omnigraph dir (Helix-style), not XDG, in RFC-002 Reverse the earlier XDG-first call. The prior argument rested on a false dichotomy (single-dir => mixed config/cache/state); in fact the peer tools (aws, kube, helix) achieve separation via SUBDIRECTORIES inside one ~/.tool/ dir (~/.aws/sso/cache/, ~/.kube/cache/), getting cache hygiene AND one discoverable place. So everything goes under ~/.omnigraph/: config.yaml, credentials (dotenv, 0600), cache/, state/. Lower cognitive load, matches what DB/cloud-CLI users expect, matches Helix. OMNIGRAPH_HOME overrides; $XDG_CONFIG_HOME optionally honored but ~/.omnigraph/ is canonical. Updated all paths, the rationale paragraph, the file-naming table (added a cache/state row), and env precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile RFC-002 with shipped/planned CLI tickets Align with reality found in existing tickets: - Noun is graph/graphs, not target/targets (MR-603 done renamed the config key targets->graphs, flag --graph). Use graphs:/--graph; an entry is embedded (uri) XOR remote (server + remote graph name). - ~/.omnigraph/ confirmed by MR-581 (og template pull, done) which already quick-starts templates there. - Templates already exist (MR-581/MR-531) — not invented here. - The init family is already specced (init, quickstart MR-973, serve MR-970, prune MR-972, mcp install MR-974, agent-mode MR-981); this RFC only adds the user route (~/.omnigraph/config.yaml + login). - aliases: -> operations: planned (MR-839). - bearer_token_env gap tracked in MR-971. - query lint/check already exist (MR-639) — registry validator must not collide with the singular `query check`. Add a Reconciliation section; fix the canonical example to graphs:/--graph. Also: merge semantics refined (deep-merge settings, replace named entries, replace lists, config view --resolved --show-origin). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: correct stale-ticket claims and fold init/bootstrap design into RFC-002 Verify against code, not ticket statuses (MR-581 is marked done but is stale/unbuilt): no ~/.omnigraph usage, no template/serve/quickstart/ prune/login commands exist; config still uses aliases: (no operations:). So ~/.omnigraph/ stands on peer-convention merits alone, and templates are a design question, not a foothold. Add §7.5: the three-tier init model (user route = login + ~/.omnigraph/config.yaml; thin project init; fat quickstart + templates) with first-principles positions (split init/login, in-place refuse-if-exists, interactive vs --auto/agent-mode, --template flag, secrets-on-scaffold gitignore rule). This RFC owns only the user route; the rest are sibling tickets (MR-973/970/972/974/981). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: breadboard + slice Shape A in RFC-002 Add the implementation breadboard (places P1-P5, affordances N1-N14 with NEW markers, mermaid) and five vertical slices for the selected config/ CLI/init shape: V1 global layer + merge engine + config view; V2 remote graphs + HTTP-client path + credential resolution; V3 omnigraph login; V4 init-hardening + quickstart + templates (rides MR-970); V5 agent-mode (MR-981). Rollout reordered to the slice sequence; spikes X1-X4 gate their owning slice. V1-V2 close the substantive client->server gap. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add InvokeQuery Cedar action (coarse, graph-scoped) A per-graph, branch-scoped action that gates invoking a server-side stored query by name. Coarse for now: an `invoke_query` allow rule permits any stored query on the graph; a future, additive refinement adds an optional per-query-name scope without changing rules written against the coarse action. Enforcement is at the HTTP boundary; the engine `_as` writers still enforce read/change per the query body, so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). No call site yet — the invocation handler wires it in a later change (same pattern as Admin/GraphList added ahead of consumers). - variant + as_str/resource_kind(Graph)/FromStr/uses_branch_scope - Cedar schema: invoke_query appliesTo Graph - tests: per-graph allow/deny, branch-scope accepted Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Load and type-check stored queries at server boot, refusing breakage At startup the server now loads each graph's stored-query registry, type-checks every query against that graph's live schema, and refuses to boot if any query references a type/property the schema doesn't have (same posture as bad policy YAML) — so schema drift surfaces at the deploy boundary, not silently at invocation. Non-blocking warnings are logged. The validated registry is attached to the GraphHandle (the two production sites previously held `queries: None`). Loading (parse + key==symbol identity) happens at settings-build time where the config is in scope; the schema type-check happens after each engine opens (single mode in `open_single_with_queries`, multi mode in `open_single_graph`). `open_with_bearer_tokens_and_policy` delegates with an empty registry so its 18 test callers are unchanged; the public `new_*` constructors are unchanged (only the private build path threads the registry). - ServerConfigMode::Single / GraphStartupConfig carry the loaded registry - boot tests: valid registry boots; type-broken query refuses boot + names it Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add `omnigraph queries validate` and `queries list` CLI `queries validate` type-checks the stored-query registry against the live schema offline — it opens the selected graph, runs the same check() the server runs at boot, prints breakages/warnings (human or --json), and exits non-zero on any breakage — so an operator can catch a query broken by a schema change without restarting the server. `queries list` prints each registered query's name, MCP exposure, and typed params. Named `validate` (not `check`) to avoid overlap with the existing `omnigraph lint` — `query check`/`query lint` are already deprecated argv-shims to `lint`. Registry entries resolve like the server: a named graph uses its per-graph `queries:`; otherwise the top-level one. - Queries subcommand group; reuses QueryRegistry::load + check from omnigraph-server; local-only (needs the schema), mirrors lint - tests: clean registry exits 0, broken query exits non-zero + names it, list shows the query and its typed params Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Route registry selection through one shared query_entries_for The "which queries: block applies for graph X" rule existed twice — the server boot path and the CLI's registry_entries — and had already drifted: the CLI carried an unreachable unwrap_or_else fallback the server lacked. Add OmnigraphConfig::query_entries_for(graph: Option<&str>) as the single definition (named graph -> its per-graph block; otherwise top-level) and route all three sites through it: server single mode, server multi-graph loop, and the CLI. The CLI's dead fallback arm is deleted; CLI and server now resolve identically by construction. No behavior change. Extends the config round-trip test to pin the selector, including the unknown-name -> top-level fallback the deleted CLI arm covered. * Funnel registry validation through one validate_and_attach gate The check -> refuse-on-breakage -> log-warnings -> empty->None block was copy-pasted across both open paths (single mode and the multi-graph per-graph open), differing only by the graph label. A third opener could attach a registry that was never schema-checked. Extract validate_and_attach(queries, catalog, label) -> Option<Arc<..>> as the single gate both paths call, so attaching an unchecked registry is no longer expressible. The catalog handle is an owned Arc, so calling it before the multi-mode policy match (which rebinds db) is borrow-clean. No behavior change. Adds a direct unit test of the helper (empty / clean / breakage incl. the graph label in the message) — covering the multi-graph path's logic, which previously had no boot-refusal coverage. * Resolve param types structurally in the MCP vector lint The exposed-query advisory detected vector params with type_name.starts_with("Vector(") — a second copy of the compiler's own ScalarType::from_str_name vector parsing that could drift from it. Key the lint off PropType::from_param_type_name + ScalarType::Vector(_) instead, the one canonical resolver the type system already uses. Any future param-suppliability lint now reads the structured type rather than scanning the surface string. Behavior-preserving: the grammar forbids list-of-vector params (list_type = "[" base_type "]", and base_type excludes Vector), so the only input where the structured and string checks could differ is unparseable. Adds a guard test that an exposed String param does not false-trigger the warning. * Refuse duplicate MCP tool names across exposed stored queries The effective MCP tool name (explicit tool_name, else the query name) is a second identity namespace beside the registry key, but nothing enforced it unique — two exposed queries could claim one catalog key, and each consumer re-derived the name ad hoc. Add StoredQuery::effective_tool_name() as the one definition, and a load-time uniqueness pass in from_specs over exposed queries: a collision is a collected LoadError naming the loser and the winner. Scoped to exposed queries (unexposed have no MCP tool); deterministic over the BTreeMap so the first-declared wins and the error order is stable. New (rare) refusal: a config with colliding exposed tool names now fails `omnigraph queries validate` offline and refuses server boot, the same posture as a malformed registry. Release-note-worthy. Test-first: duplicate_exposed_tool_name_is_a_load_error (red before the pass, green after) + a CLI offline test; the unexposed sibling pins the exposed-only scope; effective_tool_name asserts folded into the load test. * docs: document the queries registry, CLI, and invoke_query action The stored-query surface shipped without user docs. Add it, per the same-PR maintenance contract: - policy.md: invoke_query as per-graph action #10 (branch-scoped), with the double-gating note; renumber graph_list; add it to the branch_scope list. - cli-reference.md: the `queries validate | list` command, and the `queries:` config block (per-graph + top-level) with mcp.expose/tool_name and the tool-name uniqueness rule. - server.md: boot-time stored-query type-check (refuse on breakage), noting invocation over HTTP/MCP is not yet exposed. * Add POST /queries/{name} stored-query invocation handler Invoke a curated server-side stored query by name: source + name come from the per-graph queries: registry, the client sends only runtime inputs (params, branch, snapshot). Gated by the invoke_query Cedar action at the boundary; the handler delegates to the existing run_query/run_mutate, whose inner Read/Change enforce still runs — so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). - InvokeStoredQueryRequest + an untagged InvokeStoredQueryResponse { Read(ReadOutput), Change(ChangeOutput) } → one Json<_> return type and a oneOf 200 schema (a correct contract, not a wrong-but-simple one). - Route lives in per_graph_protected → single-mode /queries/{name} and multi-mode /graphs/{id}/queries/{name} for free. - Deny == unknown: an invoke_query denial and a missing query both return the same 404, so the catalog can't be probed by an unauthorized caller. - OpenAPI regenerated; tests cover read, mutation double-gate (403 vs 200), bad-param 400, and the identical-404 deny path. Completes the MR-969 V1 invocation slice (registry + /queries/{name} + invoke_query). * docs: stored-query invocation endpoint; flip the not-yet-exposed caveat Now that POST /queries/{name} ships (C7), document it: add the endpoint to server.md's inventory + an invocation section (body, untagged read/mutate envelope, invoke_query gate, double-gated mutations, deny == 404), and flip the startup note that said invocation was not yet exposed. In policy.md, replace "no invocation call site yet" on the invoke_query action with a pointer to the endpoint. * Scope the stored-query 404-hiding claim to non-invoke_query callers Review found the deny==404 catalog-hiding was overstated as a contract: it holds only at the outer invoke_query gate. A caller that HOLDS invoke_query but lacks read/change gets the inner gate's 403 for an existing query vs 404 for an unknown one — so existence is visible to grant-holders by design (the intended double-gate). The handler docstring, OpenAPI 404 description, and server.md all claimed the 404 was airtight against any denied actor. Correct the wording in all three (no behavior change) and add the missing symmetric test (invoke_query but no read -> 403 for an existing query, 404 for unknown) so the actual contract is pinned. Also document that in default-deny mode (tokens, no policy) every invocation 404s until an invoke_query rule is configured. Nits: the from_specs collision comment said "first declared wins" but it is lexicographically-first by name (BTreeMap); the effective_tool_name docstring overclaimed the CLI display routes through it (it resolves the rule on its own output DTO). * Default mcp.expose to true (the manifest entry is the opt-in) expose controls MCP-catalog membership only — it is not an authorization gate (invocation is gated by invoke_query regardless). So requiring a per-query mcp.expose: true was friction with no safety benefit: a non-exposed query is still HTTP-invocable by name. Flip the default so declaring a query in the manifest exposes it to the agent tool catalog by default; expose: false is the escape hatch for service-only queries. Both the absent-mcp path (Default impl) and the present-but-no-expose path (serde default fn) now yield true. Doc comments + cli-reference updated; the config round-trip test asserts the new default. * Add GET /queries stored-query catalog endpoint List a graph's mcp.expose stored queries as a typed tool catalog so a client (the MCP server) can register them as tools without fetching .gq source. Each entry carries name, MCP tool_name, description/instruction, a read/mutate flag, and decomposed typed params (kind enum: string|bool|int| bigint|float|date|datetime|blob|vector|list, plus item_kind for lists and vector_dim) — so the consumer builds an input schema with a closed match and never re-parses omnigraph type spelling. I64/U64 are bigint (string on the wire): a JSON number loses precision past 2^53 and the engine already accepts decimal strings. Read-gated (works in default-deny; the catalog is graph-wide, authorized against main). NOT Cedar-filtered per query yet — a reader can list a query whose invoke_query they lack (documented gap until per-query authz lands); invocation stays invoke_query-gated + deny==404. - api: QueriesCatalogOutput / QueryCatalogEntry / ParamDescriptor / ParamKind + query_catalog_entry (reuses PropType::from_param_type_name; scalar_kind is exhaustive, so a new ScalarType is a compile error here until catalogued). - GET /queries route in per_graph_protected (→ /graphs/{id}/queries in multi mode); OpenAPI regenerated; path allowlists updated. - Tests: projection unit (every kind, list, vector, nullable, mutation, empty) + handler (exposed-only filter, read-gate probe-oracle, empty registry). * docs: GET /queries stored-query catalog endpoint Document the catalog: the endpoint table row (GET /queries, read-gated), a catalog section (typed-param kind enum, bigint/date/datetime/blob-as-string, graph-wide/branch-independent, mcp.expose default true, the read-gated probe-oracle gap), and flip the startup note now that the catalog ships. * Collect file-I/O and parse errors in QueryRegistry::load in one pass load() early-returned on any unreadable .gq file, masking parse / identity / tool-name-collision errors in the OTHER (readable) files — so an operator fixed the missing file, restarted, and only then saw the next broken query. Now it collects I/O errors but still runs from_specs on the readable specs and returns the union, so every broken entry surfaces at once (matching the collected-errors contract the rest of the registry already follows). Safe: from_specs' tool-name collision check runs over loaded queries only, so dropping an I/O-failed entry can only under-report a collision, never invent one. I/O errors are ordered first (BTreeMap key order), then spec errors. Adds a load-level test (tempdir: a valid, a missing, and a parse-broken .gq) asserting all three surface in one Err — confirmed red before the fix. * Make invoke_query graph-scoped (one branch authority) invoke_query gates reaching the curated stored-query surface — a graph-level capability. Per-branch/snapshot access is already enforced by the inner read/change gate in run_query/run_mutate (authorized against the resolved branch), so branch-scoping the outer gate was redundant AND wrong for snapshot reads (it defaulted to main). Drop the branch dimension: remove InvokeQuery from uses_branch_scope (it joins admin as graph-scoped) and authorize the boundary gate with branch: None. Lossless: an actor confined to branch X by their read/change rules can still only invoke a stored query that touches X. A rule that sets branch_scope on invoke_query is now rejected by validate() — write invoke_query in its own rule. Ripple (atomic): restructure the server invoke fixture so invoke_query sits in its own branch_scope-free rule; invert invoke_query_is_branch_scoped -> invoke_query_rejects_branch_scope; the per-graph authorize test uses branch: None; docs (policy.md, server.md, the InvokeQuery doc). No wire/OpenAPI change. * Resolve graph config by identity, not server mode Which policy/queries block applies for a graph was decided three different, mode-dependent ways: single-mode boot used top-level even for a named graph; multi-mode used per-graph (and silently ignored a top-level queries block); the CLI used per-graph for a named target. So `queries validate --target prod` could check a different registry than the single-mode server loaded, and a named graph's per-graph policy/queries were silently shadowed. Make config a function of graph IDENTITY: a graph served by NAME (--target/server.graph, a graphs: entry) uses its own graphs.<name>.{policy, queries}; a bare URI is anonymous and uses top-level. One rule, applied by single-mode boot, multi-mode boot, and the CLI — so they can't diverge and the CLI predicts the server exactly. No silent ignore: serving a named graph while a top-level policy/queries block is populated now refuses boot, naming the block (the multi-mode top-level-policy bail, extended to queries and to single-mode-named). The CLI's `queries validate` derives the schema URI and the registry from ONE selection, and a positional URI forces anonymous (ignoring cli.graph) so the two can't come from different graphs. BREAKING (released behavior): single mode by name (--target/server.graph) with top-level policy/queries previously used top-level; it now uses the per-graph block and refuses boot if top-level is also populated. Bare-URI single mode is unchanged. Loud, with migration text pointing at graphs.<name>. - config: resolve_policy_file_for (policy sibling of query_entries_for, no top-level fallback) + populated_top_level_blocks for the coherence check. - characterization tests (single-mode named -> per-graph; named + top-level -> bail; multi-mode top-level queries -> bail; CLI positional-URI -> top-level). - docs: policy.md, server.md, cli-reference.md. * docs: RFC-002 credentials keyed by server name (keychain/profile/env) Reworks the RFC's credentials model: secrets are keyed by server name — OS keychain `omnigraph:<server>` (preferred) -> a `[<server>]` profile in `~/.omnigraph/credentials` -> `OMNIGRAPH_TOKEN[_<SERVER>]` env (CI), the AWS/gh/kube model. `servers.<name>` is endpoint-only by default but may carry an explicit, secret-free `auth: { token: { env|file|command|keychain } }` source. The shipped `bearer_token_env` + `.env.omni` dotenv remain a legacy compat path; no `credentials.yaml`. * docs: RFC-002 — typed graph locator (storage/server/graph_id), not a uri string Add §1.1: the resolved graph address is a typed GraphLocator (Embedded{storage} | Remote{server, graph_id}), not a flat uri: String. Diagnoses the string model's cost in the code today (~16 is_remote_uri forks, TargetConfig can't express multi-server x multi-graph, the CLI bails on remote, the ts SDK models baseUrl+graphId separately) and settles the YAML naming so the key names the locus: - storage: (embedded) — shipped uri: is a deprecated alias - server: + graph_id: (remote) — graph_id defaults to the entry key - storage xor server, reject both/neither (no silent ambiguity) Kills the graphs:/graph: collision and the uri:-might-be-a-server ambiguity. Updates the §1/§8 examples and the entry-shape notes to the new naming. * Test: queries list must reject an unknown --target queries list opens no graph URI, so unknown-graph validation does not ride along on resolve_target_uri the way it does for every other command. The new test reproduces the gap: with an unknown --target the command currently exits 0 and prints the (empty) top-level registry instead of erroring like the URI-resolving commands do. Fails against current code; the fix follows. * Validate the graph selection in queries list Graph-existence validation was a side effect of URI resolution: every URI-resolving command rejects an unknown --target via resolve_target_uri, but queries list opens no URI, so query_entries_for(Some(unknown)) silently fell back to the top-level registry and showed the wrong (or empty) catalog. Make membership a property of the selection: add the fallible resolve_graph_selection alongside the infallible query_entries_for (a known name passes through, an unknown name errors with the same message as resolve_target_uri, None stays anonymous), and validate the selection in execute_queries_list. query_entries_for is unchanged — server boot's bare-URI path still needs its None -> top-level arm. * Surface policy-engine errors from stored-query invoke The invoke handler mapped every authorize_request failure to 404 ('stored query not found'), which collapsed the authorization decision (deny -> 403) together with operational failures (no actor -> 401, Cedar evaluation error -> 500). A real policy-engine 500 was hidden as a missing query. Separate the two concerns instead of sniffing the masked status. Extract authorize() returning an Authz { Allowed, Denied(msg) } decision and reserve Err for operational failures only; authorize_request becomes a thin wrapper that maps Denied -> 403, so the 16 deny-as-403 callers are unchanged. The invoke handler now matches the decision directly: a denial stays 404 (deny == missing, so the catalog can't be probed without the grant), while a 401/500 propagates with its true status. 500 is now a reachable outcome on POST /queries/{name}; document it in the endpoint responses and regenerate openapi.json. * Extract the named-graph/top-level coherence rule into one helper The rule 'a named graph uses its own graphs.<name> block, so a populated top-level block is a config error' lived inline in single-mode server boot. Extract it to OmnigraphConfig::ensure_top_level_blocks_honored so the same definition can be shared by the CLI selection gate (next commit) and the two can't drift. Boot calls the helper; the message is reworded context-neutral (drops 'serving') so it reads correctly from both boot and the CLI. Behavior-preserving: multi-graph mode keeps its own unconditional check, and single_mode_named_graph_rejects_top_level_blocks still passes. * Test: queries validate/list must reject a named graph with a top-level block Server boot refuses a config where a graph is selected by name yet a top-level queries:/policy.file block is populated (the block would be silently ignored). The CLI's queries validate/list resolve the same named selection but skip that coherence check, so they give a false green / list the per-graph block. The new test reproduces it: validate prints OK and list succeeds where boot would refuse. Fails against current code; the fix follows. * Enforce top-level coherence in the single CLI selection gate queries validate validated graph membership only as a side effect of URI resolution and queries list only via resolve_graph_selection's membership check; neither applied the named-graph/top-level coherence rule server boot enforces, so both gave a false green on a config boot refuses. Fold ensure_top_level_blocks_honored into resolve_graph_selection so it is the single gate that returns only valid + server-coherent selections, and route resolve_selected_graph (queries validate) through it; queries list already calls the gate. A named graph with a populated top-level block now errors in both commands, matching boot. A positional URI stays anonymous (top-level honored), so queries_validate_positional_uri_ignores_default_graph is unaffected. * docs: RFC-003 — MCP server surface for omnigraph-server Detailed MCP-transport design for the stored-query/MCP work, building on the shipped #128 registry. Corrects the draft against the branch head: the coarse invoke_query gate + 404 denial-masking are already wired (server_invoke_query), so per-query invoke_query scope (PolicyRequest has no query-name dimension yet) is the real prerequisite; positions the doc as superseding rfc-001's MCP transport (/mcp/tools+/mcp/invoke) and reconciles the shipped mcp.expose YAML form and the schema-introspection non-goal; grounds the parity surface in the actual omnigraph-ts package (13 tools with read/change ids, 2 resources). * docs(config): clarify graph config boundaries * fix(config): enforce graph-scoped policies and query validation * fix(cli): require graph selection for scoped query registries * fix(server): preserve named graph id in single mode policy * fix(cli): share graph identity for policy resolution * test(cli): cover policy tooling server graph selection * fix(cli): honor server graph for policy tooling --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-01 22:50:31 +02:00
```rust
// Reuses — crates/omnigraph-policy/src/lib.rs:251
pub struct PolicyRequest { pub action: PolicyAction, pub branch: Option<String>, pub target_branch: Option<String> }
```
Stored-query registry foundation + config/CLI RFC-002 (#128) * MR-969: add stored-query registry config surface Introduce the `queries:` block in omnigraph.yaml — an inline `name -> entry` map of stored queries, per-graph (`graphs.<id>.queries`) and top-level for single-graph mode, mirroring how `policy` is wired in both modes. Each entry points at a `.gq` file and carries optional MCP exposure settings (`expose`, `tool_name`), defaulting to not-exposed. Additive: absent `queries:` leaves current behavior unchanged. - QueryEntry { file, mcp: McpSettings { expose, tool_name } } - `queries` field on TargetConfig + OmnigraphConfig (serde default) - query_entries() / target_query_entries() accessors - resolve_query_file() — base_dir-relative `.gq` path resolution - round-trip + absent-block tests Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add stored-query registry loader and GraphHandle wiring Add a `queries` module: QueryRegistry loads each declared `.gq` entry, parses it, and selects the query whose symbol matches the manifest key, asserting the two agree (key == `query <name>` symbol). Identity is the query name; a key/symbol mismatch is a load-time error. Errors are collected, not fail-fast, so a bad registry surfaces every broken entry at once. Schema type-checking is deliberately left to a separate pass so the loader stays callable without an open engine. Thread an `Option<Arc<QueryRegistry>>` through GraphHandle alongside the per-graph policy; the URI-canonicalizing clone propagates it. Production openers default to None for now — the boot path loads and attaches the registry in a later change. - QueryRegistry::{from_specs, load, lookup, iter}; StoredQuery::is_mutation - GraphHandle.queries field, propagated on canonical clone - registry unit tests: identity match/mismatch, multi-query selection, per-entry parse errors, error collection, mutation classification Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: add RFC-002 config & CLI architecture Layered config (user-global ~/.config/omnigraph/ + per-project), a unifying `target` abstraction resolving to (locus, graph, sub-state, credential) with embedded-URI XOR remote-server loci, multi-server × multi-graph client targeting, credentials by-reference, and the file-naming decision: project and server config are one artifact (`omnigraph.yaml`); the only differently-named file is the user-global `config.yaml`, split by scope not role. Includes the 12-factor bind portability rule (prefer --bind/OMNIGRAPH_BIND over a committed server.bind) and the defined-locally / invoked-remotely model for stored queries. Derived from first principles working backwards from what the engine enables; validated against kube/Helix/git/compose. Linked from docs/dev/index.md. Proposed; phased rollout for the MR-973/974/981 family. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add check() to validate stored queries against the live schema A pure check(registry, catalog) that type-checks every stored query via the same typecheck_query_decl the engine runs for inline queries — no parallel implementation. Failures are collected, not fail-fast, so an operator sees every broken query (e.g. a type/property a migration renamed or removed) in one pass. Breakages are fatal (the boot path will refuse to start); warnings are advisory. Pure over (registry, catalog) so it is callable both at boot (engine catalog) and offline from the CLI without an open engine. Advisory lint: an mcp.expose:true query that declares a Vector(N) parameter warns — an LLM cannot supply a raw embedding vector; such a query should take a String parameter and embed server-side. Warns rather than rejects, since service-to-service callers may pass vectors. - CheckReport { breakages, warnings }; has_breakages / is_clean - tests: valid query, unknown type, unknown property, collect-not-fail-fast, vector-param-exposed warns, unexposed silent Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Drop internal plan-label refs from stored-query config comments Doc comments referenced sequencing labels ("C2") that mean nothing to a reader; reword to describe the behavior directly. Comment-only. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile aliases with the role model in RFC-002 Place the existing client-only `aliases:` block in the client/server role split: aliases are client-role (CLI, embedded, ungated) and may live in both user-global and project config; `queries:` is server-role (deployment manifest only). They overlap as "name -> .gq"; `queries:` is the superset, and the end-state subsumes aliases (definition -> queries, target/branch/format -> client invocation context, positional args -> CLI sugar). v1 keeps aliases unchanged. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: make RFC-002 config global-first, project-optional The global user config is the primary, self-sufficient default; the CLI works from any directory with no project file (the kubectl/aws/gh posture), a deliberate flip from today's project-anchored behavior. The project omnigraph.yaml becomes an optional repo-scoped override and the deployment manifest. Uniform schema, both layers optional; global can hold any section including a personal server's graphs/queries. Additive: project still overrides global; the flip adds a fallback layer below the project file rather than removing it. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: justify XDG ~/.config/omnigraph over legacy ~/.omnigraph in RFC-002 Make the rationale explicit: XDG-first because OmniGraph is a client that will cache remote catalogs and keep session state alongside secrets, and XDG separates config / cache / state into distinct dirs (clear cache without touching creds; backups skip cache) whereas a single ~/.omnigraph/ mixes them. Honor ~/.omnigraph/ as a fallback for the peer-group (aws/kube/docker/helix) expectation. Add XDG_CACHE_HOME / XDG_STATE_HOME to the override precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: build RFC-002 credentials on the existing env-file mechanism OmniGraph already has credentials-by-reference: bearer_token_env names the env var, and auth.env_file is a git-ignored dotenv the CLI auto-loads (real env vars win), resolved via resolve_remote_bearer_token. The RFC's proposed credentials.yaml + token_env were redundant parallel inventions. Reconcile: reuse bearer_token_env (extend to servers.<name>) and auth.env_file (add a global ~/.config/omnigraph/.env layered under the project .env.omni); OS keychain is an additive future resolver. No new credentials.yaml. Updated summary, non-goals, background, file-naming, credentials, example, login, migration, rollout. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: use single ~/.omnigraph dir (Helix-style), not XDG, in RFC-002 Reverse the earlier XDG-first call. The prior argument rested on a false dichotomy (single-dir => mixed config/cache/state); in fact the peer tools (aws, kube, helix) achieve separation via SUBDIRECTORIES inside one ~/.tool/ dir (~/.aws/sso/cache/, ~/.kube/cache/), getting cache hygiene AND one discoverable place. So everything goes under ~/.omnigraph/: config.yaml, credentials (dotenv, 0600), cache/, state/. Lower cognitive load, matches what DB/cloud-CLI users expect, matches Helix. OMNIGRAPH_HOME overrides; $XDG_CONFIG_HOME optionally honored but ~/.omnigraph/ is canonical. Updated all paths, the rationale paragraph, the file-naming table (added a cache/state row), and env precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile RFC-002 with shipped/planned CLI tickets Align with reality found in existing tickets: - Noun is graph/graphs, not target/targets (MR-603 done renamed the config key targets->graphs, flag --graph). Use graphs:/--graph; an entry is embedded (uri) XOR remote (server + remote graph name). - ~/.omnigraph/ confirmed by MR-581 (og template pull, done) which already quick-starts templates there. - Templates already exist (MR-581/MR-531) — not invented here. - The init family is already specced (init, quickstart MR-973, serve MR-970, prune MR-972, mcp install MR-974, agent-mode MR-981); this RFC only adds the user route (~/.omnigraph/config.yaml + login). - aliases: -> operations: planned (MR-839). - bearer_token_env gap tracked in MR-971. - query lint/check already exist (MR-639) — registry validator must not collide with the singular `query check`. Add a Reconciliation section; fix the canonical example to graphs:/--graph. Also: merge semantics refined (deep-merge settings, replace named entries, replace lists, config view --resolved --show-origin). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: correct stale-ticket claims and fold init/bootstrap design into RFC-002 Verify against code, not ticket statuses (MR-581 is marked done but is stale/unbuilt): no ~/.omnigraph usage, no template/serve/quickstart/ prune/login commands exist; config still uses aliases: (no operations:). So ~/.omnigraph/ stands on peer-convention merits alone, and templates are a design question, not a foothold. Add §7.5: the three-tier init model (user route = login + ~/.omnigraph/config.yaml; thin project init; fat quickstart + templates) with first-principles positions (split init/login, in-place refuse-if-exists, interactive vs --auto/agent-mode, --template flag, secrets-on-scaffold gitignore rule). This RFC owns only the user route; the rest are sibling tickets (MR-973/970/972/974/981). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: breadboard + slice Shape A in RFC-002 Add the implementation breadboard (places P1-P5, affordances N1-N14 with NEW markers, mermaid) and five vertical slices for the selected config/ CLI/init shape: V1 global layer + merge engine + config view; V2 remote graphs + HTTP-client path + credential resolution; V3 omnigraph login; V4 init-hardening + quickstart + templates (rides MR-970); V5 agent-mode (MR-981). Rollout reordered to the slice sequence; spikes X1-X4 gate their owning slice. V1-V2 close the substantive client->server gap. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add InvokeQuery Cedar action (coarse, graph-scoped) A per-graph, branch-scoped action that gates invoking a server-side stored query by name. Coarse for now: an `invoke_query` allow rule permits any stored query on the graph; a future, additive refinement adds an optional per-query-name scope without changing rules written against the coarse action. Enforcement is at the HTTP boundary; the engine `_as` writers still enforce read/change per the query body, so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). No call site yet — the invocation handler wires it in a later change (same pattern as Admin/GraphList added ahead of consumers). - variant + as_str/resource_kind(Graph)/FromStr/uses_branch_scope - Cedar schema: invoke_query appliesTo Graph - tests: per-graph allow/deny, branch-scope accepted Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Load and type-check stored queries at server boot, refusing breakage At startup the server now loads each graph's stored-query registry, type-checks every query against that graph's live schema, and refuses to boot if any query references a type/property the schema doesn't have (same posture as bad policy YAML) — so schema drift surfaces at the deploy boundary, not silently at invocation. Non-blocking warnings are logged. The validated registry is attached to the GraphHandle (the two production sites previously held `queries: None`). Loading (parse + key==symbol identity) happens at settings-build time where the config is in scope; the schema type-check happens after each engine opens (single mode in `open_single_with_queries`, multi mode in `open_single_graph`). `open_with_bearer_tokens_and_policy` delegates with an empty registry so its 18 test callers are unchanged; the public `new_*` constructors are unchanged (only the private build path threads the registry). - ServerConfigMode::Single / GraphStartupConfig carry the loaded registry - boot tests: valid registry boots; type-broken query refuses boot + names it Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add `omnigraph queries validate` and `queries list` CLI `queries validate` type-checks the stored-query registry against the live schema offline — it opens the selected graph, runs the same check() the server runs at boot, prints breakages/warnings (human or --json), and exits non-zero on any breakage — so an operator can catch a query broken by a schema change without restarting the server. `queries list` prints each registered query's name, MCP exposure, and typed params. Named `validate` (not `check`) to avoid overlap with the existing `omnigraph lint` — `query check`/`query lint` are already deprecated argv-shims to `lint`. Registry entries resolve like the server: a named graph uses its per-graph `queries:`; otherwise the top-level one. - Queries subcommand group; reuses QueryRegistry::load + check from omnigraph-server; local-only (needs the schema), mirrors lint - tests: clean registry exits 0, broken query exits non-zero + names it, list shows the query and its typed params Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Route registry selection through one shared query_entries_for The "which queries: block applies for graph X" rule existed twice — the server boot path and the CLI's registry_entries — and had already drifted: the CLI carried an unreachable unwrap_or_else fallback the server lacked. Add OmnigraphConfig::query_entries_for(graph: Option<&str>) as the single definition (named graph -> its per-graph block; otherwise top-level) and route all three sites through it: server single mode, server multi-graph loop, and the CLI. The CLI's dead fallback arm is deleted; CLI and server now resolve identically by construction. No behavior change. Extends the config round-trip test to pin the selector, including the unknown-name -> top-level fallback the deleted CLI arm covered. * Funnel registry validation through one validate_and_attach gate The check -> refuse-on-breakage -> log-warnings -> empty->None block was copy-pasted across both open paths (single mode and the multi-graph per-graph open), differing only by the graph label. A third opener could attach a registry that was never schema-checked. Extract validate_and_attach(queries, catalog, label) -> Option<Arc<..>> as the single gate both paths call, so attaching an unchecked registry is no longer expressible. The catalog handle is an owned Arc, so calling it before the multi-mode policy match (which rebinds db) is borrow-clean. No behavior change. Adds a direct unit test of the helper (empty / clean / breakage incl. the graph label in the message) — covering the multi-graph path's logic, which previously had no boot-refusal coverage. * Resolve param types structurally in the MCP vector lint The exposed-query advisory detected vector params with type_name.starts_with("Vector(") — a second copy of the compiler's own ScalarType::from_str_name vector parsing that could drift from it. Key the lint off PropType::from_param_type_name + ScalarType::Vector(_) instead, the one canonical resolver the type system already uses. Any future param-suppliability lint now reads the structured type rather than scanning the surface string. Behavior-preserving: the grammar forbids list-of-vector params (list_type = "[" base_type "]", and base_type excludes Vector), so the only input where the structured and string checks could differ is unparseable. Adds a guard test that an exposed String param does not false-trigger the warning. * Refuse duplicate MCP tool names across exposed stored queries The effective MCP tool name (explicit tool_name, else the query name) is a second identity namespace beside the registry key, but nothing enforced it unique — two exposed queries could claim one catalog key, and each consumer re-derived the name ad hoc. Add StoredQuery::effective_tool_name() as the one definition, and a load-time uniqueness pass in from_specs over exposed queries: a collision is a collected LoadError naming the loser and the winner. Scoped to exposed queries (unexposed have no MCP tool); deterministic over the BTreeMap so the first-declared wins and the error order is stable. New (rare) refusal: a config with colliding exposed tool names now fails `omnigraph queries validate` offline and refuses server boot, the same posture as a malformed registry. Release-note-worthy. Test-first: duplicate_exposed_tool_name_is_a_load_error (red before the pass, green after) + a CLI offline test; the unexposed sibling pins the exposed-only scope; effective_tool_name asserts folded into the load test. * docs: document the queries registry, CLI, and invoke_query action The stored-query surface shipped without user docs. Add it, per the same-PR maintenance contract: - policy.md: invoke_query as per-graph action #10 (branch-scoped), with the double-gating note; renumber graph_list; add it to the branch_scope list. - cli-reference.md: the `queries validate | list` command, and the `queries:` config block (per-graph + top-level) with mcp.expose/tool_name and the tool-name uniqueness rule. - server.md: boot-time stored-query type-check (refuse on breakage), noting invocation over HTTP/MCP is not yet exposed. * Add POST /queries/{name} stored-query invocation handler Invoke a curated server-side stored query by name: source + name come from the per-graph queries: registry, the client sends only runtime inputs (params, branch, snapshot). Gated by the invoke_query Cedar action at the boundary; the handler delegates to the existing run_query/run_mutate, whose inner Read/Change enforce still runs — so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). - InvokeStoredQueryRequest + an untagged InvokeStoredQueryResponse { Read(ReadOutput), Change(ChangeOutput) } → one Json<_> return type and a oneOf 200 schema (a correct contract, not a wrong-but-simple one). - Route lives in per_graph_protected → single-mode /queries/{name} and multi-mode /graphs/{id}/queries/{name} for free. - Deny == unknown: an invoke_query denial and a missing query both return the same 404, so the catalog can't be probed by an unauthorized caller. - OpenAPI regenerated; tests cover read, mutation double-gate (403 vs 200), bad-param 400, and the identical-404 deny path. Completes the MR-969 V1 invocation slice (registry + /queries/{name} + invoke_query). * docs: stored-query invocation endpoint; flip the not-yet-exposed caveat Now that POST /queries/{name} ships (C7), document it: add the endpoint to server.md's inventory + an invocation section (body, untagged read/mutate envelope, invoke_query gate, double-gated mutations, deny == 404), and flip the startup note that said invocation was not yet exposed. In policy.md, replace "no invocation call site yet" on the invoke_query action with a pointer to the endpoint. * Scope the stored-query 404-hiding claim to non-invoke_query callers Review found the deny==404 catalog-hiding was overstated as a contract: it holds only at the outer invoke_query gate. A caller that HOLDS invoke_query but lacks read/change gets the inner gate's 403 for an existing query vs 404 for an unknown one — so existence is visible to grant-holders by design (the intended double-gate). The handler docstring, OpenAPI 404 description, and server.md all claimed the 404 was airtight against any denied actor. Correct the wording in all three (no behavior change) and add the missing symmetric test (invoke_query but no read -> 403 for an existing query, 404 for unknown) so the actual contract is pinned. Also document that in default-deny mode (tokens, no policy) every invocation 404s until an invoke_query rule is configured. Nits: the from_specs collision comment said "first declared wins" but it is lexicographically-first by name (BTreeMap); the effective_tool_name docstring overclaimed the CLI display routes through it (it resolves the rule on its own output DTO). * Default mcp.expose to true (the manifest entry is the opt-in) expose controls MCP-catalog membership only — it is not an authorization gate (invocation is gated by invoke_query regardless). So requiring a per-query mcp.expose: true was friction with no safety benefit: a non-exposed query is still HTTP-invocable by name. Flip the default so declaring a query in the manifest exposes it to the agent tool catalog by default; expose: false is the escape hatch for service-only queries. Both the absent-mcp path (Default impl) and the present-but-no-expose path (serde default fn) now yield true. Doc comments + cli-reference updated; the config round-trip test asserts the new default. * Add GET /queries stored-query catalog endpoint List a graph's mcp.expose stored queries as a typed tool catalog so a client (the MCP server) can register them as tools without fetching .gq source. Each entry carries name, MCP tool_name, description/instruction, a read/mutate flag, and decomposed typed params (kind enum: string|bool|int| bigint|float|date|datetime|blob|vector|list, plus item_kind for lists and vector_dim) — so the consumer builds an input schema with a closed match and never re-parses omnigraph type spelling. I64/U64 are bigint (string on the wire): a JSON number loses precision past 2^53 and the engine already accepts decimal strings. Read-gated (works in default-deny; the catalog is graph-wide, authorized against main). NOT Cedar-filtered per query yet — a reader can list a query whose invoke_query they lack (documented gap until per-query authz lands); invocation stays invoke_query-gated + deny==404. - api: QueriesCatalogOutput / QueryCatalogEntry / ParamDescriptor / ParamKind + query_catalog_entry (reuses PropType::from_param_type_name; scalar_kind is exhaustive, so a new ScalarType is a compile error here until catalogued). - GET /queries route in per_graph_protected (→ /graphs/{id}/queries in multi mode); OpenAPI regenerated; path allowlists updated. - Tests: projection unit (every kind, list, vector, nullable, mutation, empty) + handler (exposed-only filter, read-gate probe-oracle, empty registry). * docs: GET /queries stored-query catalog endpoint Document the catalog: the endpoint table row (GET /queries, read-gated), a catalog section (typed-param kind enum, bigint/date/datetime/blob-as-string, graph-wide/branch-independent, mcp.expose default true, the read-gated probe-oracle gap), and flip the startup note now that the catalog ships. * Collect file-I/O and parse errors in QueryRegistry::load in one pass load() early-returned on any unreadable .gq file, masking parse / identity / tool-name-collision errors in the OTHER (readable) files — so an operator fixed the missing file, restarted, and only then saw the next broken query. Now it collects I/O errors but still runs from_specs on the readable specs and returns the union, so every broken entry surfaces at once (matching the collected-errors contract the rest of the registry already follows). Safe: from_specs' tool-name collision check runs over loaded queries only, so dropping an I/O-failed entry can only under-report a collision, never invent one. I/O errors are ordered first (BTreeMap key order), then spec errors. Adds a load-level test (tempdir: a valid, a missing, and a parse-broken .gq) asserting all three surface in one Err — confirmed red before the fix. * Make invoke_query graph-scoped (one branch authority) invoke_query gates reaching the curated stored-query surface — a graph-level capability. Per-branch/snapshot access is already enforced by the inner read/change gate in run_query/run_mutate (authorized against the resolved branch), so branch-scoping the outer gate was redundant AND wrong for snapshot reads (it defaulted to main). Drop the branch dimension: remove InvokeQuery from uses_branch_scope (it joins admin as graph-scoped) and authorize the boundary gate with branch: None. Lossless: an actor confined to branch X by their read/change rules can still only invoke a stored query that touches X. A rule that sets branch_scope on invoke_query is now rejected by validate() — write invoke_query in its own rule. Ripple (atomic): restructure the server invoke fixture so invoke_query sits in its own branch_scope-free rule; invert invoke_query_is_branch_scoped -> invoke_query_rejects_branch_scope; the per-graph authorize test uses branch: None; docs (policy.md, server.md, the InvokeQuery doc). No wire/OpenAPI change. * Resolve graph config by identity, not server mode Which policy/queries block applies for a graph was decided three different, mode-dependent ways: single-mode boot used top-level even for a named graph; multi-mode used per-graph (and silently ignored a top-level queries block); the CLI used per-graph for a named target. So `queries validate --target prod` could check a different registry than the single-mode server loaded, and a named graph's per-graph policy/queries were silently shadowed. Make config a function of graph IDENTITY: a graph served by NAME (--target/server.graph, a graphs: entry) uses its own graphs.<name>.{policy, queries}; a bare URI is anonymous and uses top-level. One rule, applied by single-mode boot, multi-mode boot, and the CLI — so they can't diverge and the CLI predicts the server exactly. No silent ignore: serving a named graph while a top-level policy/queries block is populated now refuses boot, naming the block (the multi-mode top-level-policy bail, extended to queries and to single-mode-named). The CLI's `queries validate` derives the schema URI and the registry from ONE selection, and a positional URI forces anonymous (ignoring cli.graph) so the two can't come from different graphs. BREAKING (released behavior): single mode by name (--target/server.graph) with top-level policy/queries previously used top-level; it now uses the per-graph block and refuses boot if top-level is also populated. Bare-URI single mode is unchanged. Loud, with migration text pointing at graphs.<name>. - config: resolve_policy_file_for (policy sibling of query_entries_for, no top-level fallback) + populated_top_level_blocks for the coherence check. - characterization tests (single-mode named -> per-graph; named + top-level -> bail; multi-mode top-level queries -> bail; CLI positional-URI -> top-level). - docs: policy.md, server.md, cli-reference.md. * docs: RFC-002 credentials keyed by server name (keychain/profile/env) Reworks the RFC's credentials model: secrets are keyed by server name — OS keychain `omnigraph:<server>` (preferred) -> a `[<server>]` profile in `~/.omnigraph/credentials` -> `OMNIGRAPH_TOKEN[_<SERVER>]` env (CI), the AWS/gh/kube model. `servers.<name>` is endpoint-only by default but may carry an explicit, secret-free `auth: { token: { env|file|command|keychain } }` source. The shipped `bearer_token_env` + `.env.omni` dotenv remain a legacy compat path; no `credentials.yaml`. * docs: RFC-002 — typed graph locator (storage/server/graph_id), not a uri string Add §1.1: the resolved graph address is a typed GraphLocator (Embedded{storage} | Remote{server, graph_id}), not a flat uri: String. Diagnoses the string model's cost in the code today (~16 is_remote_uri forks, TargetConfig can't express multi-server x multi-graph, the CLI bails on remote, the ts SDK models baseUrl+graphId separately) and settles the YAML naming so the key names the locus: - storage: (embedded) — shipped uri: is a deprecated alias - server: + graph_id: (remote) — graph_id defaults to the entry key - storage xor server, reject both/neither (no silent ambiguity) Kills the graphs:/graph: collision and the uri:-might-be-a-server ambiguity. Updates the §1/§8 examples and the entry-shape notes to the new naming. * Test: queries list must reject an unknown --target queries list opens no graph URI, so unknown-graph validation does not ride along on resolve_target_uri the way it does for every other command. The new test reproduces the gap: with an unknown --target the command currently exits 0 and prints the (empty) top-level registry instead of erroring like the URI-resolving commands do. Fails against current code; the fix follows. * Validate the graph selection in queries list Graph-existence validation was a side effect of URI resolution: every URI-resolving command rejects an unknown --target via resolve_target_uri, but queries list opens no URI, so query_entries_for(Some(unknown)) silently fell back to the top-level registry and showed the wrong (or empty) catalog. Make membership a property of the selection: add the fallible resolve_graph_selection alongside the infallible query_entries_for (a known name passes through, an unknown name errors with the same message as resolve_target_uri, None stays anonymous), and validate the selection in execute_queries_list. query_entries_for is unchanged — server boot's bare-URI path still needs its None -> top-level arm. * Surface policy-engine errors from stored-query invoke The invoke handler mapped every authorize_request failure to 404 ('stored query not found'), which collapsed the authorization decision (deny -> 403) together with operational failures (no actor -> 401, Cedar evaluation error -> 500). A real policy-engine 500 was hidden as a missing query. Separate the two concerns instead of sniffing the masked status. Extract authorize() returning an Authz { Allowed, Denied(msg) } decision and reserve Err for operational failures only; authorize_request becomes a thin wrapper that maps Denied -> 403, so the 16 deny-as-403 callers are unchanged. The invoke handler now matches the decision directly: a denial stays 404 (deny == missing, so the catalog can't be probed without the grant), while a 401/500 propagates with its true status. 500 is now a reachable outcome on POST /queries/{name}; document it in the endpoint responses and regenerate openapi.json. * Extract the named-graph/top-level coherence rule into one helper The rule 'a named graph uses its own graphs.<name> block, so a populated top-level block is a config error' lived inline in single-mode server boot. Extract it to OmnigraphConfig::ensure_top_level_blocks_honored so the same definition can be shared by the CLI selection gate (next commit) and the two can't drift. Boot calls the helper; the message is reworded context-neutral (drops 'serving') so it reads correctly from both boot and the CLI. Behavior-preserving: multi-graph mode keeps its own unconditional check, and single_mode_named_graph_rejects_top_level_blocks still passes. * Test: queries validate/list must reject a named graph with a top-level block Server boot refuses a config where a graph is selected by name yet a top-level queries:/policy.file block is populated (the block would be silently ignored). The CLI's queries validate/list resolve the same named selection but skip that coherence check, so they give a false green / list the per-graph block. The new test reproduces it: validate prints OK and list succeeds where boot would refuse. Fails against current code; the fix follows. * Enforce top-level coherence in the single CLI selection gate queries validate validated graph membership only as a side effect of URI resolution and queries list only via resolve_graph_selection's membership check; neither applied the named-graph/top-level coherence rule server boot enforces, so both gave a false green on a config boot refuses. Fold ensure_top_level_blocks_honored into resolve_graph_selection so it is the single gate that returns only valid + server-coherent selections, and route resolve_selected_graph (queries validate) through it; queries list already calls the gate. A named graph with a populated top-level block now errors in both commands, matching boot. A positional URI stays anonymous (top-level honored), so queries_validate_positional_uri_ignores_default_graph is unaffected. * docs: RFC-003 — MCP server surface for omnigraph-server Detailed MCP-transport design for the stored-query/MCP work, building on the shipped #128 registry. Corrects the draft against the branch head: the coarse invoke_query gate + 404 denial-masking are already wired (server_invoke_query), so per-query invoke_query scope (PolicyRequest has no query-name dimension yet) is the real prerequisite; positions the doc as superseding rfc-001's MCP transport (/mcp/tools+/mcp/invoke) and reconciles the shipped mcp.expose YAML form and the schema-introspection non-goal; grounds the parity surface in the actual omnigraph-ts package (13 tools with read/change ids, 2 resources). * docs(config): clarify graph config boundaries * fix(config): enforce graph-scoped policies and query validation * fix(cli): require graph selection for scoped query registries * fix(server): preserve named graph id in single mode policy * fix(cli): share graph identity for policy resolution * test(cli): cover policy tooling server graph selection * fix(cli): honor server graph for policy tooling --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-01 22:50:31 +02:00
**The stored-query double-gate + deny-masking pattern** (`handlers.rs:913`,
`server_invoke_query`) is the contract `call_tool` mirrors for stored queries:
Stored-query registry foundation + config/CLI RFC-002 (#128) * MR-969: add stored-query registry config surface Introduce the `queries:` block in omnigraph.yaml — an inline `name -> entry` map of stored queries, per-graph (`graphs.<id>.queries`) and top-level for single-graph mode, mirroring how `policy` is wired in both modes. Each entry points at a `.gq` file and carries optional MCP exposure settings (`expose`, `tool_name`), defaulting to not-exposed. Additive: absent `queries:` leaves current behavior unchanged. - QueryEntry { file, mcp: McpSettings { expose, tool_name } } - `queries` field on TargetConfig + OmnigraphConfig (serde default) - query_entries() / target_query_entries() accessors - resolve_query_file() — base_dir-relative `.gq` path resolution - round-trip + absent-block tests Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add stored-query registry loader and GraphHandle wiring Add a `queries` module: QueryRegistry loads each declared `.gq` entry, parses it, and selects the query whose symbol matches the manifest key, asserting the two agree (key == `query <name>` symbol). Identity is the query name; a key/symbol mismatch is a load-time error. Errors are collected, not fail-fast, so a bad registry surfaces every broken entry at once. Schema type-checking is deliberately left to a separate pass so the loader stays callable without an open engine. Thread an `Option<Arc<QueryRegistry>>` through GraphHandle alongside the per-graph policy; the URI-canonicalizing clone propagates it. Production openers default to None for now — the boot path loads and attaches the registry in a later change. - QueryRegistry::{from_specs, load, lookup, iter}; StoredQuery::is_mutation - GraphHandle.queries field, propagated on canonical clone - registry unit tests: identity match/mismatch, multi-query selection, per-entry parse errors, error collection, mutation classification Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: add RFC-002 config & CLI architecture Layered config (user-global ~/.config/omnigraph/ + per-project), a unifying `target` abstraction resolving to (locus, graph, sub-state, credential) with embedded-URI XOR remote-server loci, multi-server × multi-graph client targeting, credentials by-reference, and the file-naming decision: project and server config are one artifact (`omnigraph.yaml`); the only differently-named file is the user-global `config.yaml`, split by scope not role. Includes the 12-factor bind portability rule (prefer --bind/OMNIGRAPH_BIND over a committed server.bind) and the defined-locally / invoked-remotely model for stored queries. Derived from first principles working backwards from what the engine enables; validated against kube/Helix/git/compose. Linked from docs/dev/index.md. Proposed; phased rollout for the MR-973/974/981 family. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add check() to validate stored queries against the live schema A pure check(registry, catalog) that type-checks every stored query via the same typecheck_query_decl the engine runs for inline queries — no parallel implementation. Failures are collected, not fail-fast, so an operator sees every broken query (e.g. a type/property a migration renamed or removed) in one pass. Breakages are fatal (the boot path will refuse to start); warnings are advisory. Pure over (registry, catalog) so it is callable both at boot (engine catalog) and offline from the CLI without an open engine. Advisory lint: an mcp.expose:true query that declares a Vector(N) parameter warns — an LLM cannot supply a raw embedding vector; such a query should take a String parameter and embed server-side. Warns rather than rejects, since service-to-service callers may pass vectors. - CheckReport { breakages, warnings }; has_breakages / is_clean - tests: valid query, unknown type, unknown property, collect-not-fail-fast, vector-param-exposed warns, unexposed silent Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Drop internal plan-label refs from stored-query config comments Doc comments referenced sequencing labels ("C2") that mean nothing to a reader; reword to describe the behavior directly. Comment-only. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile aliases with the role model in RFC-002 Place the existing client-only `aliases:` block in the client/server role split: aliases are client-role (CLI, embedded, ungated) and may live in both user-global and project config; `queries:` is server-role (deployment manifest only). They overlap as "name -> .gq"; `queries:` is the superset, and the end-state subsumes aliases (definition -> queries, target/branch/format -> client invocation context, positional args -> CLI sugar). v1 keeps aliases unchanged. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: make RFC-002 config global-first, project-optional The global user config is the primary, self-sufficient default; the CLI works from any directory with no project file (the kubectl/aws/gh posture), a deliberate flip from today's project-anchored behavior. The project omnigraph.yaml becomes an optional repo-scoped override and the deployment manifest. Uniform schema, both layers optional; global can hold any section including a personal server's graphs/queries. Additive: project still overrides global; the flip adds a fallback layer below the project file rather than removing it. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: justify XDG ~/.config/omnigraph over legacy ~/.omnigraph in RFC-002 Make the rationale explicit: XDG-first because OmniGraph is a client that will cache remote catalogs and keep session state alongside secrets, and XDG separates config / cache / state into distinct dirs (clear cache without touching creds; backups skip cache) whereas a single ~/.omnigraph/ mixes them. Honor ~/.omnigraph/ as a fallback for the peer-group (aws/kube/docker/helix) expectation. Add XDG_CACHE_HOME / XDG_STATE_HOME to the override precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: build RFC-002 credentials on the existing env-file mechanism OmniGraph already has credentials-by-reference: bearer_token_env names the env var, and auth.env_file is a git-ignored dotenv the CLI auto-loads (real env vars win), resolved via resolve_remote_bearer_token. The RFC's proposed credentials.yaml + token_env were redundant parallel inventions. Reconcile: reuse bearer_token_env (extend to servers.<name>) and auth.env_file (add a global ~/.config/omnigraph/.env layered under the project .env.omni); OS keychain is an additive future resolver. No new credentials.yaml. Updated summary, non-goals, background, file-naming, credentials, example, login, migration, rollout. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: use single ~/.omnigraph dir (Helix-style), not XDG, in RFC-002 Reverse the earlier XDG-first call. The prior argument rested on a false dichotomy (single-dir => mixed config/cache/state); in fact the peer tools (aws, kube, helix) achieve separation via SUBDIRECTORIES inside one ~/.tool/ dir (~/.aws/sso/cache/, ~/.kube/cache/), getting cache hygiene AND one discoverable place. So everything goes under ~/.omnigraph/: config.yaml, credentials (dotenv, 0600), cache/, state/. Lower cognitive load, matches what DB/cloud-CLI users expect, matches Helix. OMNIGRAPH_HOME overrides; $XDG_CONFIG_HOME optionally honored but ~/.omnigraph/ is canonical. Updated all paths, the rationale paragraph, the file-naming table (added a cache/state row), and env precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile RFC-002 with shipped/planned CLI tickets Align with reality found in existing tickets: - Noun is graph/graphs, not target/targets (MR-603 done renamed the config key targets->graphs, flag --graph). Use graphs:/--graph; an entry is embedded (uri) XOR remote (server + remote graph name). - ~/.omnigraph/ confirmed by MR-581 (og template pull, done) which already quick-starts templates there. - Templates already exist (MR-581/MR-531) — not invented here. - The init family is already specced (init, quickstart MR-973, serve MR-970, prune MR-972, mcp install MR-974, agent-mode MR-981); this RFC only adds the user route (~/.omnigraph/config.yaml + login). - aliases: -> operations: planned (MR-839). - bearer_token_env gap tracked in MR-971. - query lint/check already exist (MR-639) — registry validator must not collide with the singular `query check`. Add a Reconciliation section; fix the canonical example to graphs:/--graph. Also: merge semantics refined (deep-merge settings, replace named entries, replace lists, config view --resolved --show-origin). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: correct stale-ticket claims and fold init/bootstrap design into RFC-002 Verify against code, not ticket statuses (MR-581 is marked done but is stale/unbuilt): no ~/.omnigraph usage, no template/serve/quickstart/ prune/login commands exist; config still uses aliases: (no operations:). So ~/.omnigraph/ stands on peer-convention merits alone, and templates are a design question, not a foothold. Add §7.5: the three-tier init model (user route = login + ~/.omnigraph/config.yaml; thin project init; fat quickstart + templates) with first-principles positions (split init/login, in-place refuse-if-exists, interactive vs --auto/agent-mode, --template flag, secrets-on-scaffold gitignore rule). This RFC owns only the user route; the rest are sibling tickets (MR-973/970/972/974/981). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: breadboard + slice Shape A in RFC-002 Add the implementation breadboard (places P1-P5, affordances N1-N14 with NEW markers, mermaid) and five vertical slices for the selected config/ CLI/init shape: V1 global layer + merge engine + config view; V2 remote graphs + HTTP-client path + credential resolution; V3 omnigraph login; V4 init-hardening + quickstart + templates (rides MR-970); V5 agent-mode (MR-981). Rollout reordered to the slice sequence; spikes X1-X4 gate their owning slice. V1-V2 close the substantive client->server gap. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add InvokeQuery Cedar action (coarse, graph-scoped) A per-graph, branch-scoped action that gates invoking a server-side stored query by name. Coarse for now: an `invoke_query` allow rule permits any stored query on the graph; a future, additive refinement adds an optional per-query-name scope without changing rules written against the coarse action. Enforcement is at the HTTP boundary; the engine `_as` writers still enforce read/change per the query body, so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). No call site yet — the invocation handler wires it in a later change (same pattern as Admin/GraphList added ahead of consumers). - variant + as_str/resource_kind(Graph)/FromStr/uses_branch_scope - Cedar schema: invoke_query appliesTo Graph - tests: per-graph allow/deny, branch-scope accepted Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Load and type-check stored queries at server boot, refusing breakage At startup the server now loads each graph's stored-query registry, type-checks every query against that graph's live schema, and refuses to boot if any query references a type/property the schema doesn't have (same posture as bad policy YAML) — so schema drift surfaces at the deploy boundary, not silently at invocation. Non-blocking warnings are logged. The validated registry is attached to the GraphHandle (the two production sites previously held `queries: None`). Loading (parse + key==symbol identity) happens at settings-build time where the config is in scope; the schema type-check happens after each engine opens (single mode in `open_single_with_queries`, multi mode in `open_single_graph`). `open_with_bearer_tokens_and_policy` delegates with an empty registry so its 18 test callers are unchanged; the public `new_*` constructors are unchanged (only the private build path threads the registry). - ServerConfigMode::Single / GraphStartupConfig carry the loaded registry - boot tests: valid registry boots; type-broken query refuses boot + names it Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add `omnigraph queries validate` and `queries list` CLI `queries validate` type-checks the stored-query registry against the live schema offline — it opens the selected graph, runs the same check() the server runs at boot, prints breakages/warnings (human or --json), and exits non-zero on any breakage — so an operator can catch a query broken by a schema change without restarting the server. `queries list` prints each registered query's name, MCP exposure, and typed params. Named `validate` (not `check`) to avoid overlap with the existing `omnigraph lint` — `query check`/`query lint` are already deprecated argv-shims to `lint`. Registry entries resolve like the server: a named graph uses its per-graph `queries:`; otherwise the top-level one. - Queries subcommand group; reuses QueryRegistry::load + check from omnigraph-server; local-only (needs the schema), mirrors lint - tests: clean registry exits 0, broken query exits non-zero + names it, list shows the query and its typed params Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Route registry selection through one shared query_entries_for The "which queries: block applies for graph X" rule existed twice — the server boot path and the CLI's registry_entries — and had already drifted: the CLI carried an unreachable unwrap_or_else fallback the server lacked. Add OmnigraphConfig::query_entries_for(graph: Option<&str>) as the single definition (named graph -> its per-graph block; otherwise top-level) and route all three sites through it: server single mode, server multi-graph loop, and the CLI. The CLI's dead fallback arm is deleted; CLI and server now resolve identically by construction. No behavior change. Extends the config round-trip test to pin the selector, including the unknown-name -> top-level fallback the deleted CLI arm covered. * Funnel registry validation through one validate_and_attach gate The check -> refuse-on-breakage -> log-warnings -> empty->None block was copy-pasted across both open paths (single mode and the multi-graph per-graph open), differing only by the graph label. A third opener could attach a registry that was never schema-checked. Extract validate_and_attach(queries, catalog, label) -> Option<Arc<..>> as the single gate both paths call, so attaching an unchecked registry is no longer expressible. The catalog handle is an owned Arc, so calling it before the multi-mode policy match (which rebinds db) is borrow-clean. No behavior change. Adds a direct unit test of the helper (empty / clean / breakage incl. the graph label in the message) — covering the multi-graph path's logic, which previously had no boot-refusal coverage. * Resolve param types structurally in the MCP vector lint The exposed-query advisory detected vector params with type_name.starts_with("Vector(") — a second copy of the compiler's own ScalarType::from_str_name vector parsing that could drift from it. Key the lint off PropType::from_param_type_name + ScalarType::Vector(_) instead, the one canonical resolver the type system already uses. Any future param-suppliability lint now reads the structured type rather than scanning the surface string. Behavior-preserving: the grammar forbids list-of-vector params (list_type = "[" base_type "]", and base_type excludes Vector), so the only input where the structured and string checks could differ is unparseable. Adds a guard test that an exposed String param does not false-trigger the warning. * Refuse duplicate MCP tool names across exposed stored queries The effective MCP tool name (explicit tool_name, else the query name) is a second identity namespace beside the registry key, but nothing enforced it unique — two exposed queries could claim one catalog key, and each consumer re-derived the name ad hoc. Add StoredQuery::effective_tool_name() as the one definition, and a load-time uniqueness pass in from_specs over exposed queries: a collision is a collected LoadError naming the loser and the winner. Scoped to exposed queries (unexposed have no MCP tool); deterministic over the BTreeMap so the first-declared wins and the error order is stable. New (rare) refusal: a config with colliding exposed tool names now fails `omnigraph queries validate` offline and refuses server boot, the same posture as a malformed registry. Release-note-worthy. Test-first: duplicate_exposed_tool_name_is_a_load_error (red before the pass, green after) + a CLI offline test; the unexposed sibling pins the exposed-only scope; effective_tool_name asserts folded into the load test. * docs: document the queries registry, CLI, and invoke_query action The stored-query surface shipped without user docs. Add it, per the same-PR maintenance contract: - policy.md: invoke_query as per-graph action #10 (branch-scoped), with the double-gating note; renumber graph_list; add it to the branch_scope list. - cli-reference.md: the `queries validate | list` command, and the `queries:` config block (per-graph + top-level) with mcp.expose/tool_name and the tool-name uniqueness rule. - server.md: boot-time stored-query type-check (refuse on breakage), noting invocation over HTTP/MCP is not yet exposed. * Add POST /queries/{name} stored-query invocation handler Invoke a curated server-side stored query by name: source + name come from the per-graph queries: registry, the client sends only runtime inputs (params, branch, snapshot). Gated by the invoke_query Cedar action at the boundary; the handler delegates to the existing run_query/run_mutate, whose inner Read/Change enforce still runs — so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). - InvokeStoredQueryRequest + an untagged InvokeStoredQueryResponse { Read(ReadOutput), Change(ChangeOutput) } → one Json<_> return type and a oneOf 200 schema (a correct contract, not a wrong-but-simple one). - Route lives in per_graph_protected → single-mode /queries/{name} and multi-mode /graphs/{id}/queries/{name} for free. - Deny == unknown: an invoke_query denial and a missing query both return the same 404, so the catalog can't be probed by an unauthorized caller. - OpenAPI regenerated; tests cover read, mutation double-gate (403 vs 200), bad-param 400, and the identical-404 deny path. Completes the MR-969 V1 invocation slice (registry + /queries/{name} + invoke_query). * docs: stored-query invocation endpoint; flip the not-yet-exposed caveat Now that POST /queries/{name} ships (C7), document it: add the endpoint to server.md's inventory + an invocation section (body, untagged read/mutate envelope, invoke_query gate, double-gated mutations, deny == 404), and flip the startup note that said invocation was not yet exposed. In policy.md, replace "no invocation call site yet" on the invoke_query action with a pointer to the endpoint. * Scope the stored-query 404-hiding claim to non-invoke_query callers Review found the deny==404 catalog-hiding was overstated as a contract: it holds only at the outer invoke_query gate. A caller that HOLDS invoke_query but lacks read/change gets the inner gate's 403 for an existing query vs 404 for an unknown one — so existence is visible to grant-holders by design (the intended double-gate). The handler docstring, OpenAPI 404 description, and server.md all claimed the 404 was airtight against any denied actor. Correct the wording in all three (no behavior change) and add the missing symmetric test (invoke_query but no read -> 403 for an existing query, 404 for unknown) so the actual contract is pinned. Also document that in default-deny mode (tokens, no policy) every invocation 404s until an invoke_query rule is configured. Nits: the from_specs collision comment said "first declared wins" but it is lexicographically-first by name (BTreeMap); the effective_tool_name docstring overclaimed the CLI display routes through it (it resolves the rule on its own output DTO). * Default mcp.expose to true (the manifest entry is the opt-in) expose controls MCP-catalog membership only — it is not an authorization gate (invocation is gated by invoke_query regardless). So requiring a per-query mcp.expose: true was friction with no safety benefit: a non-exposed query is still HTTP-invocable by name. Flip the default so declaring a query in the manifest exposes it to the agent tool catalog by default; expose: false is the escape hatch for service-only queries. Both the absent-mcp path (Default impl) and the present-but-no-expose path (serde default fn) now yield true. Doc comments + cli-reference updated; the config round-trip test asserts the new default. * Add GET /queries stored-query catalog endpoint List a graph's mcp.expose stored queries as a typed tool catalog so a client (the MCP server) can register them as tools without fetching .gq source. Each entry carries name, MCP tool_name, description/instruction, a read/mutate flag, and decomposed typed params (kind enum: string|bool|int| bigint|float|date|datetime|blob|vector|list, plus item_kind for lists and vector_dim) — so the consumer builds an input schema with a closed match and never re-parses omnigraph type spelling. I64/U64 are bigint (string on the wire): a JSON number loses precision past 2^53 and the engine already accepts decimal strings. Read-gated (works in default-deny; the catalog is graph-wide, authorized against main). NOT Cedar-filtered per query yet — a reader can list a query whose invoke_query they lack (documented gap until per-query authz lands); invocation stays invoke_query-gated + deny==404. - api: QueriesCatalogOutput / QueryCatalogEntry / ParamDescriptor / ParamKind + query_catalog_entry (reuses PropType::from_param_type_name; scalar_kind is exhaustive, so a new ScalarType is a compile error here until catalogued). - GET /queries route in per_graph_protected (→ /graphs/{id}/queries in multi mode); OpenAPI regenerated; path allowlists updated. - Tests: projection unit (every kind, list, vector, nullable, mutation, empty) + handler (exposed-only filter, read-gate probe-oracle, empty registry). * docs: GET /queries stored-query catalog endpoint Document the catalog: the endpoint table row (GET /queries, read-gated), a catalog section (typed-param kind enum, bigint/date/datetime/blob-as-string, graph-wide/branch-independent, mcp.expose default true, the read-gated probe-oracle gap), and flip the startup note now that the catalog ships. * Collect file-I/O and parse errors in QueryRegistry::load in one pass load() early-returned on any unreadable .gq file, masking parse / identity / tool-name-collision errors in the OTHER (readable) files — so an operator fixed the missing file, restarted, and only then saw the next broken query. Now it collects I/O errors but still runs from_specs on the readable specs and returns the union, so every broken entry surfaces at once (matching the collected-errors contract the rest of the registry already follows). Safe: from_specs' tool-name collision check runs over loaded queries only, so dropping an I/O-failed entry can only under-report a collision, never invent one. I/O errors are ordered first (BTreeMap key order), then spec errors. Adds a load-level test (tempdir: a valid, a missing, and a parse-broken .gq) asserting all three surface in one Err — confirmed red before the fix. * Make invoke_query graph-scoped (one branch authority) invoke_query gates reaching the curated stored-query surface — a graph-level capability. Per-branch/snapshot access is already enforced by the inner read/change gate in run_query/run_mutate (authorized against the resolved branch), so branch-scoping the outer gate was redundant AND wrong for snapshot reads (it defaulted to main). Drop the branch dimension: remove InvokeQuery from uses_branch_scope (it joins admin as graph-scoped) and authorize the boundary gate with branch: None. Lossless: an actor confined to branch X by their read/change rules can still only invoke a stored query that touches X. A rule that sets branch_scope on invoke_query is now rejected by validate() — write invoke_query in its own rule. Ripple (atomic): restructure the server invoke fixture so invoke_query sits in its own branch_scope-free rule; invert invoke_query_is_branch_scoped -> invoke_query_rejects_branch_scope; the per-graph authorize test uses branch: None; docs (policy.md, server.md, the InvokeQuery doc). No wire/OpenAPI change. * Resolve graph config by identity, not server mode Which policy/queries block applies for a graph was decided three different, mode-dependent ways: single-mode boot used top-level even for a named graph; multi-mode used per-graph (and silently ignored a top-level queries block); the CLI used per-graph for a named target. So `queries validate --target prod` could check a different registry than the single-mode server loaded, and a named graph's per-graph policy/queries were silently shadowed. Make config a function of graph IDENTITY: a graph served by NAME (--target/server.graph, a graphs: entry) uses its own graphs.<name>.{policy, queries}; a bare URI is anonymous and uses top-level. One rule, applied by single-mode boot, multi-mode boot, and the CLI — so they can't diverge and the CLI predicts the server exactly. No silent ignore: serving a named graph while a top-level policy/queries block is populated now refuses boot, naming the block (the multi-mode top-level-policy bail, extended to queries and to single-mode-named). The CLI's `queries validate` derives the schema URI and the registry from ONE selection, and a positional URI forces anonymous (ignoring cli.graph) so the two can't come from different graphs. BREAKING (released behavior): single mode by name (--target/server.graph) with top-level policy/queries previously used top-level; it now uses the per-graph block and refuses boot if top-level is also populated. Bare-URI single mode is unchanged. Loud, with migration text pointing at graphs.<name>. - config: resolve_policy_file_for (policy sibling of query_entries_for, no top-level fallback) + populated_top_level_blocks for the coherence check. - characterization tests (single-mode named -> per-graph; named + top-level -> bail; multi-mode top-level queries -> bail; CLI positional-URI -> top-level). - docs: policy.md, server.md, cli-reference.md. * docs: RFC-002 credentials keyed by server name (keychain/profile/env) Reworks the RFC's credentials model: secrets are keyed by server name — OS keychain `omnigraph:<server>` (preferred) -> a `[<server>]` profile in `~/.omnigraph/credentials` -> `OMNIGRAPH_TOKEN[_<SERVER>]` env (CI), the AWS/gh/kube model. `servers.<name>` is endpoint-only by default but may carry an explicit, secret-free `auth: { token: { env|file|command|keychain } }` source. The shipped `bearer_token_env` + `.env.omni` dotenv remain a legacy compat path; no `credentials.yaml`. * docs: RFC-002 — typed graph locator (storage/server/graph_id), not a uri string Add §1.1: the resolved graph address is a typed GraphLocator (Embedded{storage} | Remote{server, graph_id}), not a flat uri: String. Diagnoses the string model's cost in the code today (~16 is_remote_uri forks, TargetConfig can't express multi-server x multi-graph, the CLI bails on remote, the ts SDK models baseUrl+graphId separately) and settles the YAML naming so the key names the locus: - storage: (embedded) — shipped uri: is a deprecated alias - server: + graph_id: (remote) — graph_id defaults to the entry key - storage xor server, reject both/neither (no silent ambiguity) Kills the graphs:/graph: collision and the uri:-might-be-a-server ambiguity. Updates the §1/§8 examples and the entry-shape notes to the new naming. * Test: queries list must reject an unknown --target queries list opens no graph URI, so unknown-graph validation does not ride along on resolve_target_uri the way it does for every other command. The new test reproduces the gap: with an unknown --target the command currently exits 0 and prints the (empty) top-level registry instead of erroring like the URI-resolving commands do. Fails against current code; the fix follows. * Validate the graph selection in queries list Graph-existence validation was a side effect of URI resolution: every URI-resolving command rejects an unknown --target via resolve_target_uri, but queries list opens no URI, so query_entries_for(Some(unknown)) silently fell back to the top-level registry and showed the wrong (or empty) catalog. Make membership a property of the selection: add the fallible resolve_graph_selection alongside the infallible query_entries_for (a known name passes through, an unknown name errors with the same message as resolve_target_uri, None stays anonymous), and validate the selection in execute_queries_list. query_entries_for is unchanged — server boot's bare-URI path still needs its None -> top-level arm. * Surface policy-engine errors from stored-query invoke The invoke handler mapped every authorize_request failure to 404 ('stored query not found'), which collapsed the authorization decision (deny -> 403) together with operational failures (no actor -> 401, Cedar evaluation error -> 500). A real policy-engine 500 was hidden as a missing query. Separate the two concerns instead of sniffing the masked status. Extract authorize() returning an Authz { Allowed, Denied(msg) } decision and reserve Err for operational failures only; authorize_request becomes a thin wrapper that maps Denied -> 403, so the 16 deny-as-403 callers are unchanged. The invoke handler now matches the decision directly: a denial stays 404 (deny == missing, so the catalog can't be probed without the grant), while a 401/500 propagates with its true status. 500 is now a reachable outcome on POST /queries/{name}; document it in the endpoint responses and regenerate openapi.json. * Extract the named-graph/top-level coherence rule into one helper The rule 'a named graph uses its own graphs.<name> block, so a populated top-level block is a config error' lived inline in single-mode server boot. Extract it to OmnigraphConfig::ensure_top_level_blocks_honored so the same definition can be shared by the CLI selection gate (next commit) and the two can't drift. Boot calls the helper; the message is reworded context-neutral (drops 'serving') so it reads correctly from both boot and the CLI. Behavior-preserving: multi-graph mode keeps its own unconditional check, and single_mode_named_graph_rejects_top_level_blocks still passes. * Test: queries validate/list must reject a named graph with a top-level block Server boot refuses a config where a graph is selected by name yet a top-level queries:/policy.file block is populated (the block would be silently ignored). The CLI's queries validate/list resolve the same named selection but skip that coherence check, so they give a false green / list the per-graph block. The new test reproduces it: validate prints OK and list succeeds where boot would refuse. Fails against current code; the fix follows. * Enforce top-level coherence in the single CLI selection gate queries validate validated graph membership only as a side effect of URI resolution and queries list only via resolve_graph_selection's membership check; neither applied the named-graph/top-level coherence rule server boot enforces, so both gave a false green on a config boot refuses. Fold ensure_top_level_blocks_honored into resolve_graph_selection so it is the single gate that returns only valid + server-coherent selections, and route resolve_selected_graph (queries validate) through it; queries list already calls the gate. A named graph with a populated top-level block now errors in both commands, matching boot. A positional URI stays anonymous (top-level honored), so queries_validate_positional_uri_ignores_default_graph is unaffected. * docs: RFC-003 — MCP server surface for omnigraph-server Detailed MCP-transport design for the stored-query/MCP work, building on the shipped #128 registry. Corrects the draft against the branch head: the coarse invoke_query gate + 404 denial-masking are already wired (server_invoke_query), so per-query invoke_query scope (PolicyRequest has no query-name dimension yet) is the real prerequisite; positions the doc as superseding rfc-001's MCP transport (/mcp/tools+/mcp/invoke) and reconciles the shipped mcp.expose YAML form and the schema-introspection non-goal; grounds the parity surface in the actual omnigraph-ts package (13 tools with read/change ids, 2 resources). * docs(config): clarify graph config boundaries * fix(config): enforce graph-scoped policies and query validation * fix(cli): require graph selection for scoped query registries * fix(server): preserve named graph id in single mode policy * fix(cli): share graph identity for policy resolution * test(cli): cover policy tooling server graph selection * fix(cli): honor server graph for policy tooling --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-01 22:50:31 +02:00
```rust
// Reuses (pattern) — outer InvokeQuery gate; deny == missing so the catalog can't be probed
match authorize(actor, handle.policy.as_deref(), PolicyRequest {
action: PolicyAction::InvokeQuery, branch: None, target_branch: None, // graph-scoped: NO branch dimension
})? {
Authz::Allowed => {}
Authz::Denied(_) => return Err(ApiError::not_found("stored query not found")),
}
let stored = handle.queries.as_ref().and_then(|r| r.lookup(&name)).ok_or_else(|| ApiError::not_found("stored query not found"))?;
// inner gate runs in run_mutate (Change) / run_query (Read); a stored mutation is double-gated.
```
Stored-query registry foundation + config/CLI RFC-002 (#128) * MR-969: add stored-query registry config surface Introduce the `queries:` block in omnigraph.yaml — an inline `name -> entry` map of stored queries, per-graph (`graphs.<id>.queries`) and top-level for single-graph mode, mirroring how `policy` is wired in both modes. Each entry points at a `.gq` file and carries optional MCP exposure settings (`expose`, `tool_name`), defaulting to not-exposed. Additive: absent `queries:` leaves current behavior unchanged. - QueryEntry { file, mcp: McpSettings { expose, tool_name } } - `queries` field on TargetConfig + OmnigraphConfig (serde default) - query_entries() / target_query_entries() accessors - resolve_query_file() — base_dir-relative `.gq` path resolution - round-trip + absent-block tests Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add stored-query registry loader and GraphHandle wiring Add a `queries` module: QueryRegistry loads each declared `.gq` entry, parses it, and selects the query whose symbol matches the manifest key, asserting the two agree (key == `query <name>` symbol). Identity is the query name; a key/symbol mismatch is a load-time error. Errors are collected, not fail-fast, so a bad registry surfaces every broken entry at once. Schema type-checking is deliberately left to a separate pass so the loader stays callable without an open engine. Thread an `Option<Arc<QueryRegistry>>` through GraphHandle alongside the per-graph policy; the URI-canonicalizing clone propagates it. Production openers default to None for now — the boot path loads and attaches the registry in a later change. - QueryRegistry::{from_specs, load, lookup, iter}; StoredQuery::is_mutation - GraphHandle.queries field, propagated on canonical clone - registry unit tests: identity match/mismatch, multi-query selection, per-entry parse errors, error collection, mutation classification Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: add RFC-002 config & CLI architecture Layered config (user-global ~/.config/omnigraph/ + per-project), a unifying `target` abstraction resolving to (locus, graph, sub-state, credential) with embedded-URI XOR remote-server loci, multi-server × multi-graph client targeting, credentials by-reference, and the file-naming decision: project and server config are one artifact (`omnigraph.yaml`); the only differently-named file is the user-global `config.yaml`, split by scope not role. Includes the 12-factor bind portability rule (prefer --bind/OMNIGRAPH_BIND over a committed server.bind) and the defined-locally / invoked-remotely model for stored queries. Derived from first principles working backwards from what the engine enables; validated against kube/Helix/git/compose. Linked from docs/dev/index.md. Proposed; phased rollout for the MR-973/974/981 family. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add check() to validate stored queries against the live schema A pure check(registry, catalog) that type-checks every stored query via the same typecheck_query_decl the engine runs for inline queries — no parallel implementation. Failures are collected, not fail-fast, so an operator sees every broken query (e.g. a type/property a migration renamed or removed) in one pass. Breakages are fatal (the boot path will refuse to start); warnings are advisory. Pure over (registry, catalog) so it is callable both at boot (engine catalog) and offline from the CLI without an open engine. Advisory lint: an mcp.expose:true query that declares a Vector(N) parameter warns — an LLM cannot supply a raw embedding vector; such a query should take a String parameter and embed server-side. Warns rather than rejects, since service-to-service callers may pass vectors. - CheckReport { breakages, warnings }; has_breakages / is_clean - tests: valid query, unknown type, unknown property, collect-not-fail-fast, vector-param-exposed warns, unexposed silent Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Drop internal plan-label refs from stored-query config comments Doc comments referenced sequencing labels ("C2") that mean nothing to a reader; reword to describe the behavior directly. Comment-only. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile aliases with the role model in RFC-002 Place the existing client-only `aliases:` block in the client/server role split: aliases are client-role (CLI, embedded, ungated) and may live in both user-global and project config; `queries:` is server-role (deployment manifest only). They overlap as "name -> .gq"; `queries:` is the superset, and the end-state subsumes aliases (definition -> queries, target/branch/format -> client invocation context, positional args -> CLI sugar). v1 keeps aliases unchanged. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: make RFC-002 config global-first, project-optional The global user config is the primary, self-sufficient default; the CLI works from any directory with no project file (the kubectl/aws/gh posture), a deliberate flip from today's project-anchored behavior. The project omnigraph.yaml becomes an optional repo-scoped override and the deployment manifest. Uniform schema, both layers optional; global can hold any section including a personal server's graphs/queries. Additive: project still overrides global; the flip adds a fallback layer below the project file rather than removing it. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: justify XDG ~/.config/omnigraph over legacy ~/.omnigraph in RFC-002 Make the rationale explicit: XDG-first because OmniGraph is a client that will cache remote catalogs and keep session state alongside secrets, and XDG separates config / cache / state into distinct dirs (clear cache without touching creds; backups skip cache) whereas a single ~/.omnigraph/ mixes them. Honor ~/.omnigraph/ as a fallback for the peer-group (aws/kube/docker/helix) expectation. Add XDG_CACHE_HOME / XDG_STATE_HOME to the override precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: build RFC-002 credentials on the existing env-file mechanism OmniGraph already has credentials-by-reference: bearer_token_env names the env var, and auth.env_file is a git-ignored dotenv the CLI auto-loads (real env vars win), resolved via resolve_remote_bearer_token. The RFC's proposed credentials.yaml + token_env were redundant parallel inventions. Reconcile: reuse bearer_token_env (extend to servers.<name>) and auth.env_file (add a global ~/.config/omnigraph/.env layered under the project .env.omni); OS keychain is an additive future resolver. No new credentials.yaml. Updated summary, non-goals, background, file-naming, credentials, example, login, migration, rollout. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: use single ~/.omnigraph dir (Helix-style), not XDG, in RFC-002 Reverse the earlier XDG-first call. The prior argument rested on a false dichotomy (single-dir => mixed config/cache/state); in fact the peer tools (aws, kube, helix) achieve separation via SUBDIRECTORIES inside one ~/.tool/ dir (~/.aws/sso/cache/, ~/.kube/cache/), getting cache hygiene AND one discoverable place. So everything goes under ~/.omnigraph/: config.yaml, credentials (dotenv, 0600), cache/, state/. Lower cognitive load, matches what DB/cloud-CLI users expect, matches Helix. OMNIGRAPH_HOME overrides; $XDG_CONFIG_HOME optionally honored but ~/.omnigraph/ is canonical. Updated all paths, the rationale paragraph, the file-naming table (added a cache/state row), and env precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile RFC-002 with shipped/planned CLI tickets Align with reality found in existing tickets: - Noun is graph/graphs, not target/targets (MR-603 done renamed the config key targets->graphs, flag --graph). Use graphs:/--graph; an entry is embedded (uri) XOR remote (server + remote graph name). - ~/.omnigraph/ confirmed by MR-581 (og template pull, done) which already quick-starts templates there. - Templates already exist (MR-581/MR-531) — not invented here. - The init family is already specced (init, quickstart MR-973, serve MR-970, prune MR-972, mcp install MR-974, agent-mode MR-981); this RFC only adds the user route (~/.omnigraph/config.yaml + login). - aliases: -> operations: planned (MR-839). - bearer_token_env gap tracked in MR-971. - query lint/check already exist (MR-639) — registry validator must not collide with the singular `query check`. Add a Reconciliation section; fix the canonical example to graphs:/--graph. Also: merge semantics refined (deep-merge settings, replace named entries, replace lists, config view --resolved --show-origin). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: correct stale-ticket claims and fold init/bootstrap design into RFC-002 Verify against code, not ticket statuses (MR-581 is marked done but is stale/unbuilt): no ~/.omnigraph usage, no template/serve/quickstart/ prune/login commands exist; config still uses aliases: (no operations:). So ~/.omnigraph/ stands on peer-convention merits alone, and templates are a design question, not a foothold. Add §7.5: the three-tier init model (user route = login + ~/.omnigraph/config.yaml; thin project init; fat quickstart + templates) with first-principles positions (split init/login, in-place refuse-if-exists, interactive vs --auto/agent-mode, --template flag, secrets-on-scaffold gitignore rule). This RFC owns only the user route; the rest are sibling tickets (MR-973/970/972/974/981). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: breadboard + slice Shape A in RFC-002 Add the implementation breadboard (places P1-P5, affordances N1-N14 with NEW markers, mermaid) and five vertical slices for the selected config/ CLI/init shape: V1 global layer + merge engine + config view; V2 remote graphs + HTTP-client path + credential resolution; V3 omnigraph login; V4 init-hardening + quickstart + templates (rides MR-970); V5 agent-mode (MR-981). Rollout reordered to the slice sequence; spikes X1-X4 gate their owning slice. V1-V2 close the substantive client->server gap. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add InvokeQuery Cedar action (coarse, graph-scoped) A per-graph, branch-scoped action that gates invoking a server-side stored query by name. Coarse for now: an `invoke_query` allow rule permits any stored query on the graph; a future, additive refinement adds an optional per-query-name scope without changing rules written against the coarse action. Enforcement is at the HTTP boundary; the engine `_as` writers still enforce read/change per the query body, so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). No call site yet — the invocation handler wires it in a later change (same pattern as Admin/GraphList added ahead of consumers). - variant + as_str/resource_kind(Graph)/FromStr/uses_branch_scope - Cedar schema: invoke_query appliesTo Graph - tests: per-graph allow/deny, branch-scope accepted Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Load and type-check stored queries at server boot, refusing breakage At startup the server now loads each graph's stored-query registry, type-checks every query against that graph's live schema, and refuses to boot if any query references a type/property the schema doesn't have (same posture as bad policy YAML) — so schema drift surfaces at the deploy boundary, not silently at invocation. Non-blocking warnings are logged. The validated registry is attached to the GraphHandle (the two production sites previously held `queries: None`). Loading (parse + key==symbol identity) happens at settings-build time where the config is in scope; the schema type-check happens after each engine opens (single mode in `open_single_with_queries`, multi mode in `open_single_graph`). `open_with_bearer_tokens_and_policy` delegates with an empty registry so its 18 test callers are unchanged; the public `new_*` constructors are unchanged (only the private build path threads the registry). - ServerConfigMode::Single / GraphStartupConfig carry the loaded registry - boot tests: valid registry boots; type-broken query refuses boot + names it Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add `omnigraph queries validate` and `queries list` CLI `queries validate` type-checks the stored-query registry against the live schema offline — it opens the selected graph, runs the same check() the server runs at boot, prints breakages/warnings (human or --json), and exits non-zero on any breakage — so an operator can catch a query broken by a schema change without restarting the server. `queries list` prints each registered query's name, MCP exposure, and typed params. Named `validate` (not `check`) to avoid overlap with the existing `omnigraph lint` — `query check`/`query lint` are already deprecated argv-shims to `lint`. Registry entries resolve like the server: a named graph uses its per-graph `queries:`; otherwise the top-level one. - Queries subcommand group; reuses QueryRegistry::load + check from omnigraph-server; local-only (needs the schema), mirrors lint - tests: clean registry exits 0, broken query exits non-zero + names it, list shows the query and its typed params Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Route registry selection through one shared query_entries_for The "which queries: block applies for graph X" rule existed twice — the server boot path and the CLI's registry_entries — and had already drifted: the CLI carried an unreachable unwrap_or_else fallback the server lacked. Add OmnigraphConfig::query_entries_for(graph: Option<&str>) as the single definition (named graph -> its per-graph block; otherwise top-level) and route all three sites through it: server single mode, server multi-graph loop, and the CLI. The CLI's dead fallback arm is deleted; CLI and server now resolve identically by construction. No behavior change. Extends the config round-trip test to pin the selector, including the unknown-name -> top-level fallback the deleted CLI arm covered. * Funnel registry validation through one validate_and_attach gate The check -> refuse-on-breakage -> log-warnings -> empty->None block was copy-pasted across both open paths (single mode and the multi-graph per-graph open), differing only by the graph label. A third opener could attach a registry that was never schema-checked. Extract validate_and_attach(queries, catalog, label) -> Option<Arc<..>> as the single gate both paths call, so attaching an unchecked registry is no longer expressible. The catalog handle is an owned Arc, so calling it before the multi-mode policy match (which rebinds db) is borrow-clean. No behavior change. Adds a direct unit test of the helper (empty / clean / breakage incl. the graph label in the message) — covering the multi-graph path's logic, which previously had no boot-refusal coverage. * Resolve param types structurally in the MCP vector lint The exposed-query advisory detected vector params with type_name.starts_with("Vector(") — a second copy of the compiler's own ScalarType::from_str_name vector parsing that could drift from it. Key the lint off PropType::from_param_type_name + ScalarType::Vector(_) instead, the one canonical resolver the type system already uses. Any future param-suppliability lint now reads the structured type rather than scanning the surface string. Behavior-preserving: the grammar forbids list-of-vector params (list_type = "[" base_type "]", and base_type excludes Vector), so the only input where the structured and string checks could differ is unparseable. Adds a guard test that an exposed String param does not false-trigger the warning. * Refuse duplicate MCP tool names across exposed stored queries The effective MCP tool name (explicit tool_name, else the query name) is a second identity namespace beside the registry key, but nothing enforced it unique — two exposed queries could claim one catalog key, and each consumer re-derived the name ad hoc. Add StoredQuery::effective_tool_name() as the one definition, and a load-time uniqueness pass in from_specs over exposed queries: a collision is a collected LoadError naming the loser and the winner. Scoped to exposed queries (unexposed have no MCP tool); deterministic over the BTreeMap so the first-declared wins and the error order is stable. New (rare) refusal: a config with colliding exposed tool names now fails `omnigraph queries validate` offline and refuses server boot, the same posture as a malformed registry. Release-note-worthy. Test-first: duplicate_exposed_tool_name_is_a_load_error (red before the pass, green after) + a CLI offline test; the unexposed sibling pins the exposed-only scope; effective_tool_name asserts folded into the load test. * docs: document the queries registry, CLI, and invoke_query action The stored-query surface shipped without user docs. Add it, per the same-PR maintenance contract: - policy.md: invoke_query as per-graph action #10 (branch-scoped), with the double-gating note; renumber graph_list; add it to the branch_scope list. - cli-reference.md: the `queries validate | list` command, and the `queries:` config block (per-graph + top-level) with mcp.expose/tool_name and the tool-name uniqueness rule. - server.md: boot-time stored-query type-check (refuse on breakage), noting invocation over HTTP/MCP is not yet exposed. * Add POST /queries/{name} stored-query invocation handler Invoke a curated server-side stored query by name: source + name come from the per-graph queries: registry, the client sends only runtime inputs (params, branch, snapshot). Gated by the invoke_query Cedar action at the boundary; the handler delegates to the existing run_query/run_mutate, whose inner Read/Change enforce still runs — so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). - InvokeStoredQueryRequest + an untagged InvokeStoredQueryResponse { Read(ReadOutput), Change(ChangeOutput) } → one Json<_> return type and a oneOf 200 schema (a correct contract, not a wrong-but-simple one). - Route lives in per_graph_protected → single-mode /queries/{name} and multi-mode /graphs/{id}/queries/{name} for free. - Deny == unknown: an invoke_query denial and a missing query both return the same 404, so the catalog can't be probed by an unauthorized caller. - OpenAPI regenerated; tests cover read, mutation double-gate (403 vs 200), bad-param 400, and the identical-404 deny path. Completes the MR-969 V1 invocation slice (registry + /queries/{name} + invoke_query). * docs: stored-query invocation endpoint; flip the not-yet-exposed caveat Now that POST /queries/{name} ships (C7), document it: add the endpoint to server.md's inventory + an invocation section (body, untagged read/mutate envelope, invoke_query gate, double-gated mutations, deny == 404), and flip the startup note that said invocation was not yet exposed. In policy.md, replace "no invocation call site yet" on the invoke_query action with a pointer to the endpoint. * Scope the stored-query 404-hiding claim to non-invoke_query callers Review found the deny==404 catalog-hiding was overstated as a contract: it holds only at the outer invoke_query gate. A caller that HOLDS invoke_query but lacks read/change gets the inner gate's 403 for an existing query vs 404 for an unknown one — so existence is visible to grant-holders by design (the intended double-gate). The handler docstring, OpenAPI 404 description, and server.md all claimed the 404 was airtight against any denied actor. Correct the wording in all three (no behavior change) and add the missing symmetric test (invoke_query but no read -> 403 for an existing query, 404 for unknown) so the actual contract is pinned. Also document that in default-deny mode (tokens, no policy) every invocation 404s until an invoke_query rule is configured. Nits: the from_specs collision comment said "first declared wins" but it is lexicographically-first by name (BTreeMap); the effective_tool_name docstring overclaimed the CLI display routes through it (it resolves the rule on its own output DTO). * Default mcp.expose to true (the manifest entry is the opt-in) expose controls MCP-catalog membership only — it is not an authorization gate (invocation is gated by invoke_query regardless). So requiring a per-query mcp.expose: true was friction with no safety benefit: a non-exposed query is still HTTP-invocable by name. Flip the default so declaring a query in the manifest exposes it to the agent tool catalog by default; expose: false is the escape hatch for service-only queries. Both the absent-mcp path (Default impl) and the present-but-no-expose path (serde default fn) now yield true. Doc comments + cli-reference updated; the config round-trip test asserts the new default. * Add GET /queries stored-query catalog endpoint List a graph's mcp.expose stored queries as a typed tool catalog so a client (the MCP server) can register them as tools without fetching .gq source. Each entry carries name, MCP tool_name, description/instruction, a read/mutate flag, and decomposed typed params (kind enum: string|bool|int| bigint|float|date|datetime|blob|vector|list, plus item_kind for lists and vector_dim) — so the consumer builds an input schema with a closed match and never re-parses omnigraph type spelling. I64/U64 are bigint (string on the wire): a JSON number loses precision past 2^53 and the engine already accepts decimal strings. Read-gated (works in default-deny; the catalog is graph-wide, authorized against main). NOT Cedar-filtered per query yet — a reader can list a query whose invoke_query they lack (documented gap until per-query authz lands); invocation stays invoke_query-gated + deny==404. - api: QueriesCatalogOutput / QueryCatalogEntry / ParamDescriptor / ParamKind + query_catalog_entry (reuses PropType::from_param_type_name; scalar_kind is exhaustive, so a new ScalarType is a compile error here until catalogued). - GET /queries route in per_graph_protected (→ /graphs/{id}/queries in multi mode); OpenAPI regenerated; path allowlists updated. - Tests: projection unit (every kind, list, vector, nullable, mutation, empty) + handler (exposed-only filter, read-gate probe-oracle, empty registry). * docs: GET /queries stored-query catalog endpoint Document the catalog: the endpoint table row (GET /queries, read-gated), a catalog section (typed-param kind enum, bigint/date/datetime/blob-as-string, graph-wide/branch-independent, mcp.expose default true, the read-gated probe-oracle gap), and flip the startup note now that the catalog ships. * Collect file-I/O and parse errors in QueryRegistry::load in one pass load() early-returned on any unreadable .gq file, masking parse / identity / tool-name-collision errors in the OTHER (readable) files — so an operator fixed the missing file, restarted, and only then saw the next broken query. Now it collects I/O errors but still runs from_specs on the readable specs and returns the union, so every broken entry surfaces at once (matching the collected-errors contract the rest of the registry already follows). Safe: from_specs' tool-name collision check runs over loaded queries only, so dropping an I/O-failed entry can only under-report a collision, never invent one. I/O errors are ordered first (BTreeMap key order), then spec errors. Adds a load-level test (tempdir: a valid, a missing, and a parse-broken .gq) asserting all three surface in one Err — confirmed red before the fix. * Make invoke_query graph-scoped (one branch authority) invoke_query gates reaching the curated stored-query surface — a graph-level capability. Per-branch/snapshot access is already enforced by the inner read/change gate in run_query/run_mutate (authorized against the resolved branch), so branch-scoping the outer gate was redundant AND wrong for snapshot reads (it defaulted to main). Drop the branch dimension: remove InvokeQuery from uses_branch_scope (it joins admin as graph-scoped) and authorize the boundary gate with branch: None. Lossless: an actor confined to branch X by their read/change rules can still only invoke a stored query that touches X. A rule that sets branch_scope on invoke_query is now rejected by validate() — write invoke_query in its own rule. Ripple (atomic): restructure the server invoke fixture so invoke_query sits in its own branch_scope-free rule; invert invoke_query_is_branch_scoped -> invoke_query_rejects_branch_scope; the per-graph authorize test uses branch: None; docs (policy.md, server.md, the InvokeQuery doc). No wire/OpenAPI change. * Resolve graph config by identity, not server mode Which policy/queries block applies for a graph was decided three different, mode-dependent ways: single-mode boot used top-level even for a named graph; multi-mode used per-graph (and silently ignored a top-level queries block); the CLI used per-graph for a named target. So `queries validate --target prod` could check a different registry than the single-mode server loaded, and a named graph's per-graph policy/queries were silently shadowed. Make config a function of graph IDENTITY: a graph served by NAME (--target/server.graph, a graphs: entry) uses its own graphs.<name>.{policy, queries}; a bare URI is anonymous and uses top-level. One rule, applied by single-mode boot, multi-mode boot, and the CLI — so they can't diverge and the CLI predicts the server exactly. No silent ignore: serving a named graph while a top-level policy/queries block is populated now refuses boot, naming the block (the multi-mode top-level-policy bail, extended to queries and to single-mode-named). The CLI's `queries validate` derives the schema URI and the registry from ONE selection, and a positional URI forces anonymous (ignoring cli.graph) so the two can't come from different graphs. BREAKING (released behavior): single mode by name (--target/server.graph) with top-level policy/queries previously used top-level; it now uses the per-graph block and refuses boot if top-level is also populated. Bare-URI single mode is unchanged. Loud, with migration text pointing at graphs.<name>. - config: resolve_policy_file_for (policy sibling of query_entries_for, no top-level fallback) + populated_top_level_blocks for the coherence check. - characterization tests (single-mode named -> per-graph; named + top-level -> bail; multi-mode top-level queries -> bail; CLI positional-URI -> top-level). - docs: policy.md, server.md, cli-reference.md. * docs: RFC-002 credentials keyed by server name (keychain/profile/env) Reworks the RFC's credentials model: secrets are keyed by server name — OS keychain `omnigraph:<server>` (preferred) -> a `[<server>]` profile in `~/.omnigraph/credentials` -> `OMNIGRAPH_TOKEN[_<SERVER>]` env (CI), the AWS/gh/kube model. `servers.<name>` is endpoint-only by default but may carry an explicit, secret-free `auth: { token: { env|file|command|keychain } }` source. The shipped `bearer_token_env` + `.env.omni` dotenv remain a legacy compat path; no `credentials.yaml`. * docs: RFC-002 — typed graph locator (storage/server/graph_id), not a uri string Add §1.1: the resolved graph address is a typed GraphLocator (Embedded{storage} | Remote{server, graph_id}), not a flat uri: String. Diagnoses the string model's cost in the code today (~16 is_remote_uri forks, TargetConfig can't express multi-server x multi-graph, the CLI bails on remote, the ts SDK models baseUrl+graphId separately) and settles the YAML naming so the key names the locus: - storage: (embedded) — shipped uri: is a deprecated alias - server: + graph_id: (remote) — graph_id defaults to the entry key - storage xor server, reject both/neither (no silent ambiguity) Kills the graphs:/graph: collision and the uri:-might-be-a-server ambiguity. Updates the §1/§8 examples and the entry-shape notes to the new naming. * Test: queries list must reject an unknown --target queries list opens no graph URI, so unknown-graph validation does not ride along on resolve_target_uri the way it does for every other command. The new test reproduces the gap: with an unknown --target the command currently exits 0 and prints the (empty) top-level registry instead of erroring like the URI-resolving commands do. Fails against current code; the fix follows. * Validate the graph selection in queries list Graph-existence validation was a side effect of URI resolution: every URI-resolving command rejects an unknown --target via resolve_target_uri, but queries list opens no URI, so query_entries_for(Some(unknown)) silently fell back to the top-level registry and showed the wrong (or empty) catalog. Make membership a property of the selection: add the fallible resolve_graph_selection alongside the infallible query_entries_for (a known name passes through, an unknown name errors with the same message as resolve_target_uri, None stays anonymous), and validate the selection in execute_queries_list. query_entries_for is unchanged — server boot's bare-URI path still needs its None -> top-level arm. * Surface policy-engine errors from stored-query invoke The invoke handler mapped every authorize_request failure to 404 ('stored query not found'), which collapsed the authorization decision (deny -> 403) together with operational failures (no actor -> 401, Cedar evaluation error -> 500). A real policy-engine 500 was hidden as a missing query. Separate the two concerns instead of sniffing the masked status. Extract authorize() returning an Authz { Allowed, Denied(msg) } decision and reserve Err for operational failures only; authorize_request becomes a thin wrapper that maps Denied -> 403, so the 16 deny-as-403 callers are unchanged. The invoke handler now matches the decision directly: a denial stays 404 (deny == missing, so the catalog can't be probed without the grant), while a 401/500 propagates with its true status. 500 is now a reachable outcome on POST /queries/{name}; document it in the endpoint responses and regenerate openapi.json. * Extract the named-graph/top-level coherence rule into one helper The rule 'a named graph uses its own graphs.<name> block, so a populated top-level block is a config error' lived inline in single-mode server boot. Extract it to OmnigraphConfig::ensure_top_level_blocks_honored so the same definition can be shared by the CLI selection gate (next commit) and the two can't drift. Boot calls the helper; the message is reworded context-neutral (drops 'serving') so it reads correctly from both boot and the CLI. Behavior-preserving: multi-graph mode keeps its own unconditional check, and single_mode_named_graph_rejects_top_level_blocks still passes. * Test: queries validate/list must reject a named graph with a top-level block Server boot refuses a config where a graph is selected by name yet a top-level queries:/policy.file block is populated (the block would be silently ignored). The CLI's queries validate/list resolve the same named selection but skip that coherence check, so they give a false green / list the per-graph block. The new test reproduces it: validate prints OK and list succeeds where boot would refuse. Fails against current code; the fix follows. * Enforce top-level coherence in the single CLI selection gate queries validate validated graph membership only as a side effect of URI resolution and queries list only via resolve_graph_selection's membership check; neither applied the named-graph/top-level coherence rule server boot enforces, so both gave a false green on a config boot refuses. Fold ensure_top_level_blocks_honored into resolve_graph_selection so it is the single gate that returns only valid + server-coherent selections, and route resolve_selected_graph (queries validate) through it; queries list already calls the gate. A named graph with a populated top-level block now errors in both commands, matching boot. A positional URI stays anonymous (top-level honored), so queries_validate_positional_uri_ignores_default_graph is unaffected. * docs: RFC-003 — MCP server surface for omnigraph-server Detailed MCP-transport design for the stored-query/MCP work, building on the shipped #128 registry. Corrects the draft against the branch head: the coarse invoke_query gate + 404 denial-masking are already wired (server_invoke_query), so per-query invoke_query scope (PolicyRequest has no query-name dimension yet) is the real prerequisite; positions the doc as superseding rfc-001's MCP transport (/mcp/tools+/mcp/invoke) and reconciles the shipped mcp.expose YAML form and the schema-introspection non-goal; grounds the parity surface in the actual omnigraph-ts package (13 tools with read/change ids, 2 resources). * docs(config): clarify graph config boundaries * fix(config): enforce graph-scoped policies and query validation * fix(cli): require graph selection for scoped query registries * fix(server): preserve named graph id in single mode policy * fix(cli): share graph identity for policy resolution * test(cli): cover policy tooling server graph selection * fix(cli): honor server graph for policy tooling --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-01 22:50:31 +02:00
**`graph_load` (NDJSON)** wraps the unified `load_as` via `run_ingest` (the canonical
`server_load` handler, `handlers.rs:1320`; `POST /ingest` / `server_ingest`,
`handlers.rs:1360`, is a `#[deprecated]` alias emitting RFC-9745 headers — RFC-009
Phase 5): a missing branch with **no `from` is a `404`, never an implicit fork**;
`BranchCreate` is consulted only when `from` is present, then `Change` for the load.
The tool's `input_schema` is `{ data: string, branch?: string, from?: string,
mode?: "merge"|"append"|"overwrite" }`, `additionalProperties: false` (the same
`IngestRequest` shape, `omnigraph-api-types/src/lib.rs:496`).
Stored-query registry foundation + config/CLI RFC-002 (#128) * MR-969: add stored-query registry config surface Introduce the `queries:` block in omnigraph.yaml — an inline `name -> entry` map of stored queries, per-graph (`graphs.<id>.queries`) and top-level for single-graph mode, mirroring how `policy` is wired in both modes. Each entry points at a `.gq` file and carries optional MCP exposure settings (`expose`, `tool_name`), defaulting to not-exposed. Additive: absent `queries:` leaves current behavior unchanged. - QueryEntry { file, mcp: McpSettings { expose, tool_name } } - `queries` field on TargetConfig + OmnigraphConfig (serde default) - query_entries() / target_query_entries() accessors - resolve_query_file() — base_dir-relative `.gq` path resolution - round-trip + absent-block tests Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add stored-query registry loader and GraphHandle wiring Add a `queries` module: QueryRegistry loads each declared `.gq` entry, parses it, and selects the query whose symbol matches the manifest key, asserting the two agree (key == `query <name>` symbol). Identity is the query name; a key/symbol mismatch is a load-time error. Errors are collected, not fail-fast, so a bad registry surfaces every broken entry at once. Schema type-checking is deliberately left to a separate pass so the loader stays callable without an open engine. Thread an `Option<Arc<QueryRegistry>>` through GraphHandle alongside the per-graph policy; the URI-canonicalizing clone propagates it. Production openers default to None for now — the boot path loads and attaches the registry in a later change. - QueryRegistry::{from_specs, load, lookup, iter}; StoredQuery::is_mutation - GraphHandle.queries field, propagated on canonical clone - registry unit tests: identity match/mismatch, multi-query selection, per-entry parse errors, error collection, mutation classification Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: add RFC-002 config & CLI architecture Layered config (user-global ~/.config/omnigraph/ + per-project), a unifying `target` abstraction resolving to (locus, graph, sub-state, credential) with embedded-URI XOR remote-server loci, multi-server × multi-graph client targeting, credentials by-reference, and the file-naming decision: project and server config are one artifact (`omnigraph.yaml`); the only differently-named file is the user-global `config.yaml`, split by scope not role. Includes the 12-factor bind portability rule (prefer --bind/OMNIGRAPH_BIND over a committed server.bind) and the defined-locally / invoked-remotely model for stored queries. Derived from first principles working backwards from what the engine enables; validated against kube/Helix/git/compose. Linked from docs/dev/index.md. Proposed; phased rollout for the MR-973/974/981 family. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add check() to validate stored queries against the live schema A pure check(registry, catalog) that type-checks every stored query via the same typecheck_query_decl the engine runs for inline queries — no parallel implementation. Failures are collected, not fail-fast, so an operator sees every broken query (e.g. a type/property a migration renamed or removed) in one pass. Breakages are fatal (the boot path will refuse to start); warnings are advisory. Pure over (registry, catalog) so it is callable both at boot (engine catalog) and offline from the CLI without an open engine. Advisory lint: an mcp.expose:true query that declares a Vector(N) parameter warns — an LLM cannot supply a raw embedding vector; such a query should take a String parameter and embed server-side. Warns rather than rejects, since service-to-service callers may pass vectors. - CheckReport { breakages, warnings }; has_breakages / is_clean - tests: valid query, unknown type, unknown property, collect-not-fail-fast, vector-param-exposed warns, unexposed silent Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Drop internal plan-label refs from stored-query config comments Doc comments referenced sequencing labels ("C2") that mean nothing to a reader; reword to describe the behavior directly. Comment-only. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile aliases with the role model in RFC-002 Place the existing client-only `aliases:` block in the client/server role split: aliases are client-role (CLI, embedded, ungated) and may live in both user-global and project config; `queries:` is server-role (deployment manifest only). They overlap as "name -> .gq"; `queries:` is the superset, and the end-state subsumes aliases (definition -> queries, target/branch/format -> client invocation context, positional args -> CLI sugar). v1 keeps aliases unchanged. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: make RFC-002 config global-first, project-optional The global user config is the primary, self-sufficient default; the CLI works from any directory with no project file (the kubectl/aws/gh posture), a deliberate flip from today's project-anchored behavior. The project omnigraph.yaml becomes an optional repo-scoped override and the deployment manifest. Uniform schema, both layers optional; global can hold any section including a personal server's graphs/queries. Additive: project still overrides global; the flip adds a fallback layer below the project file rather than removing it. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: justify XDG ~/.config/omnigraph over legacy ~/.omnigraph in RFC-002 Make the rationale explicit: XDG-first because OmniGraph is a client that will cache remote catalogs and keep session state alongside secrets, and XDG separates config / cache / state into distinct dirs (clear cache without touching creds; backups skip cache) whereas a single ~/.omnigraph/ mixes them. Honor ~/.omnigraph/ as a fallback for the peer-group (aws/kube/docker/helix) expectation. Add XDG_CACHE_HOME / XDG_STATE_HOME to the override precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: build RFC-002 credentials on the existing env-file mechanism OmniGraph already has credentials-by-reference: bearer_token_env names the env var, and auth.env_file is a git-ignored dotenv the CLI auto-loads (real env vars win), resolved via resolve_remote_bearer_token. The RFC's proposed credentials.yaml + token_env were redundant parallel inventions. Reconcile: reuse bearer_token_env (extend to servers.<name>) and auth.env_file (add a global ~/.config/omnigraph/.env layered under the project .env.omni); OS keychain is an additive future resolver. No new credentials.yaml. Updated summary, non-goals, background, file-naming, credentials, example, login, migration, rollout. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: use single ~/.omnigraph dir (Helix-style), not XDG, in RFC-002 Reverse the earlier XDG-first call. The prior argument rested on a false dichotomy (single-dir => mixed config/cache/state); in fact the peer tools (aws, kube, helix) achieve separation via SUBDIRECTORIES inside one ~/.tool/ dir (~/.aws/sso/cache/, ~/.kube/cache/), getting cache hygiene AND one discoverable place. So everything goes under ~/.omnigraph/: config.yaml, credentials (dotenv, 0600), cache/, state/. Lower cognitive load, matches what DB/cloud-CLI users expect, matches Helix. OMNIGRAPH_HOME overrides; $XDG_CONFIG_HOME optionally honored but ~/.omnigraph/ is canonical. Updated all paths, the rationale paragraph, the file-naming table (added a cache/state row), and env precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile RFC-002 with shipped/planned CLI tickets Align with reality found in existing tickets: - Noun is graph/graphs, not target/targets (MR-603 done renamed the config key targets->graphs, flag --graph). Use graphs:/--graph; an entry is embedded (uri) XOR remote (server + remote graph name). - ~/.omnigraph/ confirmed by MR-581 (og template pull, done) which already quick-starts templates there. - Templates already exist (MR-581/MR-531) — not invented here. - The init family is already specced (init, quickstart MR-973, serve MR-970, prune MR-972, mcp install MR-974, agent-mode MR-981); this RFC only adds the user route (~/.omnigraph/config.yaml + login). - aliases: -> operations: planned (MR-839). - bearer_token_env gap tracked in MR-971. - query lint/check already exist (MR-639) — registry validator must not collide with the singular `query check`. Add a Reconciliation section; fix the canonical example to graphs:/--graph. Also: merge semantics refined (deep-merge settings, replace named entries, replace lists, config view --resolved --show-origin). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: correct stale-ticket claims and fold init/bootstrap design into RFC-002 Verify against code, not ticket statuses (MR-581 is marked done but is stale/unbuilt): no ~/.omnigraph usage, no template/serve/quickstart/ prune/login commands exist; config still uses aliases: (no operations:). So ~/.omnigraph/ stands on peer-convention merits alone, and templates are a design question, not a foothold. Add §7.5: the three-tier init model (user route = login + ~/.omnigraph/config.yaml; thin project init; fat quickstart + templates) with first-principles positions (split init/login, in-place refuse-if-exists, interactive vs --auto/agent-mode, --template flag, secrets-on-scaffold gitignore rule). This RFC owns only the user route; the rest are sibling tickets (MR-973/970/972/974/981). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: breadboard + slice Shape A in RFC-002 Add the implementation breadboard (places P1-P5, affordances N1-N14 with NEW markers, mermaid) and five vertical slices for the selected config/ CLI/init shape: V1 global layer + merge engine + config view; V2 remote graphs + HTTP-client path + credential resolution; V3 omnigraph login; V4 init-hardening + quickstart + templates (rides MR-970); V5 agent-mode (MR-981). Rollout reordered to the slice sequence; spikes X1-X4 gate their owning slice. V1-V2 close the substantive client->server gap. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add InvokeQuery Cedar action (coarse, graph-scoped) A per-graph, branch-scoped action that gates invoking a server-side stored query by name. Coarse for now: an `invoke_query` allow rule permits any stored query on the graph; a future, additive refinement adds an optional per-query-name scope without changing rules written against the coarse action. Enforcement is at the HTTP boundary; the engine `_as` writers still enforce read/change per the query body, so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). No call site yet — the invocation handler wires it in a later change (same pattern as Admin/GraphList added ahead of consumers). - variant + as_str/resource_kind(Graph)/FromStr/uses_branch_scope - Cedar schema: invoke_query appliesTo Graph - tests: per-graph allow/deny, branch-scope accepted Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Load and type-check stored queries at server boot, refusing breakage At startup the server now loads each graph's stored-query registry, type-checks every query against that graph's live schema, and refuses to boot if any query references a type/property the schema doesn't have (same posture as bad policy YAML) — so schema drift surfaces at the deploy boundary, not silently at invocation. Non-blocking warnings are logged. The validated registry is attached to the GraphHandle (the two production sites previously held `queries: None`). Loading (parse + key==symbol identity) happens at settings-build time where the config is in scope; the schema type-check happens after each engine opens (single mode in `open_single_with_queries`, multi mode in `open_single_graph`). `open_with_bearer_tokens_and_policy` delegates with an empty registry so its 18 test callers are unchanged; the public `new_*` constructors are unchanged (only the private build path threads the registry). - ServerConfigMode::Single / GraphStartupConfig carry the loaded registry - boot tests: valid registry boots; type-broken query refuses boot + names it Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add `omnigraph queries validate` and `queries list` CLI `queries validate` type-checks the stored-query registry against the live schema offline — it opens the selected graph, runs the same check() the server runs at boot, prints breakages/warnings (human or --json), and exits non-zero on any breakage — so an operator can catch a query broken by a schema change without restarting the server. `queries list` prints each registered query's name, MCP exposure, and typed params. Named `validate` (not `check`) to avoid overlap with the existing `omnigraph lint` — `query check`/`query lint` are already deprecated argv-shims to `lint`. Registry entries resolve like the server: a named graph uses its per-graph `queries:`; otherwise the top-level one. - Queries subcommand group; reuses QueryRegistry::load + check from omnigraph-server; local-only (needs the schema), mirrors lint - tests: clean registry exits 0, broken query exits non-zero + names it, list shows the query and its typed params Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Route registry selection through one shared query_entries_for The "which queries: block applies for graph X" rule existed twice — the server boot path and the CLI's registry_entries — and had already drifted: the CLI carried an unreachable unwrap_or_else fallback the server lacked. Add OmnigraphConfig::query_entries_for(graph: Option<&str>) as the single definition (named graph -> its per-graph block; otherwise top-level) and route all three sites through it: server single mode, server multi-graph loop, and the CLI. The CLI's dead fallback arm is deleted; CLI and server now resolve identically by construction. No behavior change. Extends the config round-trip test to pin the selector, including the unknown-name -> top-level fallback the deleted CLI arm covered. * Funnel registry validation through one validate_and_attach gate The check -> refuse-on-breakage -> log-warnings -> empty->None block was copy-pasted across both open paths (single mode and the multi-graph per-graph open), differing only by the graph label. A third opener could attach a registry that was never schema-checked. Extract validate_and_attach(queries, catalog, label) -> Option<Arc<..>> as the single gate both paths call, so attaching an unchecked registry is no longer expressible. The catalog handle is an owned Arc, so calling it before the multi-mode policy match (which rebinds db) is borrow-clean. No behavior change. Adds a direct unit test of the helper (empty / clean / breakage incl. the graph label in the message) — covering the multi-graph path's logic, which previously had no boot-refusal coverage. * Resolve param types structurally in the MCP vector lint The exposed-query advisory detected vector params with type_name.starts_with("Vector(") — a second copy of the compiler's own ScalarType::from_str_name vector parsing that could drift from it. Key the lint off PropType::from_param_type_name + ScalarType::Vector(_) instead, the one canonical resolver the type system already uses. Any future param-suppliability lint now reads the structured type rather than scanning the surface string. Behavior-preserving: the grammar forbids list-of-vector params (list_type = "[" base_type "]", and base_type excludes Vector), so the only input where the structured and string checks could differ is unparseable. Adds a guard test that an exposed String param does not false-trigger the warning. * Refuse duplicate MCP tool names across exposed stored queries The effective MCP tool name (explicit tool_name, else the query name) is a second identity namespace beside the registry key, but nothing enforced it unique — two exposed queries could claim one catalog key, and each consumer re-derived the name ad hoc. Add StoredQuery::effective_tool_name() as the one definition, and a load-time uniqueness pass in from_specs over exposed queries: a collision is a collected LoadError naming the loser and the winner. Scoped to exposed queries (unexposed have no MCP tool); deterministic over the BTreeMap so the first-declared wins and the error order is stable. New (rare) refusal: a config with colliding exposed tool names now fails `omnigraph queries validate` offline and refuses server boot, the same posture as a malformed registry. Release-note-worthy. Test-first: duplicate_exposed_tool_name_is_a_load_error (red before the pass, green after) + a CLI offline test; the unexposed sibling pins the exposed-only scope; effective_tool_name asserts folded into the load test. * docs: document the queries registry, CLI, and invoke_query action The stored-query surface shipped without user docs. Add it, per the same-PR maintenance contract: - policy.md: invoke_query as per-graph action #10 (branch-scoped), with the double-gating note; renumber graph_list; add it to the branch_scope list. - cli-reference.md: the `queries validate | list` command, and the `queries:` config block (per-graph + top-level) with mcp.expose/tool_name and the tool-name uniqueness rule. - server.md: boot-time stored-query type-check (refuse on breakage), noting invocation over HTTP/MCP is not yet exposed. * Add POST /queries/{name} stored-query invocation handler Invoke a curated server-side stored query by name: source + name come from the per-graph queries: registry, the client sends only runtime inputs (params, branch, snapshot). Gated by the invoke_query Cedar action at the boundary; the handler delegates to the existing run_query/run_mutate, whose inner Read/Change enforce still runs — so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). - InvokeStoredQueryRequest + an untagged InvokeStoredQueryResponse { Read(ReadOutput), Change(ChangeOutput) } → one Json<_> return type and a oneOf 200 schema (a correct contract, not a wrong-but-simple one). - Route lives in per_graph_protected → single-mode /queries/{name} and multi-mode /graphs/{id}/queries/{name} for free. - Deny == unknown: an invoke_query denial and a missing query both return the same 404, so the catalog can't be probed by an unauthorized caller. - OpenAPI regenerated; tests cover read, mutation double-gate (403 vs 200), bad-param 400, and the identical-404 deny path. Completes the MR-969 V1 invocation slice (registry + /queries/{name} + invoke_query). * docs: stored-query invocation endpoint; flip the not-yet-exposed caveat Now that POST /queries/{name} ships (C7), document it: add the endpoint to server.md's inventory + an invocation section (body, untagged read/mutate envelope, invoke_query gate, double-gated mutations, deny == 404), and flip the startup note that said invocation was not yet exposed. In policy.md, replace "no invocation call site yet" on the invoke_query action with a pointer to the endpoint. * Scope the stored-query 404-hiding claim to non-invoke_query callers Review found the deny==404 catalog-hiding was overstated as a contract: it holds only at the outer invoke_query gate. A caller that HOLDS invoke_query but lacks read/change gets the inner gate's 403 for an existing query vs 404 for an unknown one — so existence is visible to grant-holders by design (the intended double-gate). The handler docstring, OpenAPI 404 description, and server.md all claimed the 404 was airtight against any denied actor. Correct the wording in all three (no behavior change) and add the missing symmetric test (invoke_query but no read -> 403 for an existing query, 404 for unknown) so the actual contract is pinned. Also document that in default-deny mode (tokens, no policy) every invocation 404s until an invoke_query rule is configured. Nits: the from_specs collision comment said "first declared wins" but it is lexicographically-first by name (BTreeMap); the effective_tool_name docstring overclaimed the CLI display routes through it (it resolves the rule on its own output DTO). * Default mcp.expose to true (the manifest entry is the opt-in) expose controls MCP-catalog membership only — it is not an authorization gate (invocation is gated by invoke_query regardless). So requiring a per-query mcp.expose: true was friction with no safety benefit: a non-exposed query is still HTTP-invocable by name. Flip the default so declaring a query in the manifest exposes it to the agent tool catalog by default; expose: false is the escape hatch for service-only queries. Both the absent-mcp path (Default impl) and the present-but-no-expose path (serde default fn) now yield true. Doc comments + cli-reference updated; the config round-trip test asserts the new default. * Add GET /queries stored-query catalog endpoint List a graph's mcp.expose stored queries as a typed tool catalog so a client (the MCP server) can register them as tools without fetching .gq source. Each entry carries name, MCP tool_name, description/instruction, a read/mutate flag, and decomposed typed params (kind enum: string|bool|int| bigint|float|date|datetime|blob|vector|list, plus item_kind for lists and vector_dim) — so the consumer builds an input schema with a closed match and never re-parses omnigraph type spelling. I64/U64 are bigint (string on the wire): a JSON number loses precision past 2^53 and the engine already accepts decimal strings. Read-gated (works in default-deny; the catalog is graph-wide, authorized against main). NOT Cedar-filtered per query yet — a reader can list a query whose invoke_query they lack (documented gap until per-query authz lands); invocation stays invoke_query-gated + deny==404. - api: QueriesCatalogOutput / QueryCatalogEntry / ParamDescriptor / ParamKind + query_catalog_entry (reuses PropType::from_param_type_name; scalar_kind is exhaustive, so a new ScalarType is a compile error here until catalogued). - GET /queries route in per_graph_protected (→ /graphs/{id}/queries in multi mode); OpenAPI regenerated; path allowlists updated. - Tests: projection unit (every kind, list, vector, nullable, mutation, empty) + handler (exposed-only filter, read-gate probe-oracle, empty registry). * docs: GET /queries stored-query catalog endpoint Document the catalog: the endpoint table row (GET /queries, read-gated), a catalog section (typed-param kind enum, bigint/date/datetime/blob-as-string, graph-wide/branch-independent, mcp.expose default true, the read-gated probe-oracle gap), and flip the startup note now that the catalog ships. * Collect file-I/O and parse errors in QueryRegistry::load in one pass load() early-returned on any unreadable .gq file, masking parse / identity / tool-name-collision errors in the OTHER (readable) files — so an operator fixed the missing file, restarted, and only then saw the next broken query. Now it collects I/O errors but still runs from_specs on the readable specs and returns the union, so every broken entry surfaces at once (matching the collected-errors contract the rest of the registry already follows). Safe: from_specs' tool-name collision check runs over loaded queries only, so dropping an I/O-failed entry can only under-report a collision, never invent one. I/O errors are ordered first (BTreeMap key order), then spec errors. Adds a load-level test (tempdir: a valid, a missing, and a parse-broken .gq) asserting all three surface in one Err — confirmed red before the fix. * Make invoke_query graph-scoped (one branch authority) invoke_query gates reaching the curated stored-query surface — a graph-level capability. Per-branch/snapshot access is already enforced by the inner read/change gate in run_query/run_mutate (authorized against the resolved branch), so branch-scoping the outer gate was redundant AND wrong for snapshot reads (it defaulted to main). Drop the branch dimension: remove InvokeQuery from uses_branch_scope (it joins admin as graph-scoped) and authorize the boundary gate with branch: None. Lossless: an actor confined to branch X by their read/change rules can still only invoke a stored query that touches X. A rule that sets branch_scope on invoke_query is now rejected by validate() — write invoke_query in its own rule. Ripple (atomic): restructure the server invoke fixture so invoke_query sits in its own branch_scope-free rule; invert invoke_query_is_branch_scoped -> invoke_query_rejects_branch_scope; the per-graph authorize test uses branch: None; docs (policy.md, server.md, the InvokeQuery doc). No wire/OpenAPI change. * Resolve graph config by identity, not server mode Which policy/queries block applies for a graph was decided three different, mode-dependent ways: single-mode boot used top-level even for a named graph; multi-mode used per-graph (and silently ignored a top-level queries block); the CLI used per-graph for a named target. So `queries validate --target prod` could check a different registry than the single-mode server loaded, and a named graph's per-graph policy/queries were silently shadowed. Make config a function of graph IDENTITY: a graph served by NAME (--target/server.graph, a graphs: entry) uses its own graphs.<name>.{policy, queries}; a bare URI is anonymous and uses top-level. One rule, applied by single-mode boot, multi-mode boot, and the CLI — so they can't diverge and the CLI predicts the server exactly. No silent ignore: serving a named graph while a top-level policy/queries block is populated now refuses boot, naming the block (the multi-mode top-level-policy bail, extended to queries and to single-mode-named). The CLI's `queries validate` derives the schema URI and the registry from ONE selection, and a positional URI forces anonymous (ignoring cli.graph) so the two can't come from different graphs. BREAKING (released behavior): single mode by name (--target/server.graph) with top-level policy/queries previously used top-level; it now uses the per-graph block and refuses boot if top-level is also populated. Bare-URI single mode is unchanged. Loud, with migration text pointing at graphs.<name>. - config: resolve_policy_file_for (policy sibling of query_entries_for, no top-level fallback) + populated_top_level_blocks for the coherence check. - characterization tests (single-mode named -> per-graph; named + top-level -> bail; multi-mode top-level queries -> bail; CLI positional-URI -> top-level). - docs: policy.md, server.md, cli-reference.md. * docs: RFC-002 credentials keyed by server name (keychain/profile/env) Reworks the RFC's credentials model: secrets are keyed by server name — OS keychain `omnigraph:<server>` (preferred) -> a `[<server>]` profile in `~/.omnigraph/credentials` -> `OMNIGRAPH_TOKEN[_<SERVER>]` env (CI), the AWS/gh/kube model. `servers.<name>` is endpoint-only by default but may carry an explicit, secret-free `auth: { token: { env|file|command|keychain } }` source. The shipped `bearer_token_env` + `.env.omni` dotenv remain a legacy compat path; no `credentials.yaml`. * docs: RFC-002 — typed graph locator (storage/server/graph_id), not a uri string Add §1.1: the resolved graph address is a typed GraphLocator (Embedded{storage} | Remote{server, graph_id}), not a flat uri: String. Diagnoses the string model's cost in the code today (~16 is_remote_uri forks, TargetConfig can't express multi-server x multi-graph, the CLI bails on remote, the ts SDK models baseUrl+graphId separately) and settles the YAML naming so the key names the locus: - storage: (embedded) — shipped uri: is a deprecated alias - server: + graph_id: (remote) — graph_id defaults to the entry key - storage xor server, reject both/neither (no silent ambiguity) Kills the graphs:/graph: collision and the uri:-might-be-a-server ambiguity. Updates the §1/§8 examples and the entry-shape notes to the new naming. * Test: queries list must reject an unknown --target queries list opens no graph URI, so unknown-graph validation does not ride along on resolve_target_uri the way it does for every other command. The new test reproduces the gap: with an unknown --target the command currently exits 0 and prints the (empty) top-level registry instead of erroring like the URI-resolving commands do. Fails against current code; the fix follows. * Validate the graph selection in queries list Graph-existence validation was a side effect of URI resolution: every URI-resolving command rejects an unknown --target via resolve_target_uri, but queries list opens no URI, so query_entries_for(Some(unknown)) silently fell back to the top-level registry and showed the wrong (or empty) catalog. Make membership a property of the selection: add the fallible resolve_graph_selection alongside the infallible query_entries_for (a known name passes through, an unknown name errors with the same message as resolve_target_uri, None stays anonymous), and validate the selection in execute_queries_list. query_entries_for is unchanged — server boot's bare-URI path still needs its None -> top-level arm. * Surface policy-engine errors from stored-query invoke The invoke handler mapped every authorize_request failure to 404 ('stored query not found'), which collapsed the authorization decision (deny -> 403) together with operational failures (no actor -> 401, Cedar evaluation error -> 500). A real policy-engine 500 was hidden as a missing query. Separate the two concerns instead of sniffing the masked status. Extract authorize() returning an Authz { Allowed, Denied(msg) } decision and reserve Err for operational failures only; authorize_request becomes a thin wrapper that maps Denied -> 403, so the 16 deny-as-403 callers are unchanged. The invoke handler now matches the decision directly: a denial stays 404 (deny == missing, so the catalog can't be probed without the grant), while a 401/500 propagates with its true status. 500 is now a reachable outcome on POST /queries/{name}; document it in the endpoint responses and regenerate openapi.json. * Extract the named-graph/top-level coherence rule into one helper The rule 'a named graph uses its own graphs.<name> block, so a populated top-level block is a config error' lived inline in single-mode server boot. Extract it to OmnigraphConfig::ensure_top_level_blocks_honored so the same definition can be shared by the CLI selection gate (next commit) and the two can't drift. Boot calls the helper; the message is reworded context-neutral (drops 'serving') so it reads correctly from both boot and the CLI. Behavior-preserving: multi-graph mode keeps its own unconditional check, and single_mode_named_graph_rejects_top_level_blocks still passes. * Test: queries validate/list must reject a named graph with a top-level block Server boot refuses a config where a graph is selected by name yet a top-level queries:/policy.file block is populated (the block would be silently ignored). The CLI's queries validate/list resolve the same named selection but skip that coherence check, so they give a false green / list the per-graph block. The new test reproduces it: validate prints OK and list succeeds where boot would refuse. Fails against current code; the fix follows. * Enforce top-level coherence in the single CLI selection gate queries validate validated graph membership only as a side effect of URI resolution and queries list only via resolve_graph_selection's membership check; neither applied the named-graph/top-level coherence rule server boot enforces, so both gave a false green on a config boot refuses. Fold ensure_top_level_blocks_honored into resolve_graph_selection so it is the single gate that returns only valid + server-coherent selections, and route resolve_selected_graph (queries validate) through it; queries list already calls the gate. A named graph with a populated top-level block now errors in both commands, matching boot. A positional URI stays anonymous (top-level honored), so queries_validate_positional_uri_ignores_default_graph is unaffected. * docs: RFC-003 — MCP server surface for omnigraph-server Detailed MCP-transport design for the stored-query/MCP work, building on the shipped #128 registry. Corrects the draft against the branch head: the coarse invoke_query gate + 404 denial-masking are already wired (server_invoke_query), so per-query invoke_query scope (PolicyRequest has no query-name dimension yet) is the real prerequisite; positions the doc as superseding rfc-001's MCP transport (/mcp/tools+/mcp/invoke) and reconciles the shipped mcp.expose YAML form and the schema-introspection non-goal; grounds the parity surface in the actual omnigraph-ts package (13 tools with read/change ids, 2 resources). * docs(config): clarify graph config boundaries * fix(config): enforce graph-scoped policies and query validation * fix(cli): require graph selection for scoped query registries * fix(server): preserve named graph id in single mode policy * fix(cli): share graph identity for policy resolution * test(cli): cover policy tooling server graph selection * fix(cli): honor server graph for policy tooling --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-01 22:50:31 +02:00
**Error classification (`New`, one mapper, SEP-1303-aligned).** `ApiError`'s fields are
private (`lib.rs:280`, and still carry no public status/message accessors), so add
`pub(crate) fn status_code(&self)`/`message_str(&self)` accessors. Then one `classify`
is used at every dispatch site:
Stored-query registry foundation + config/CLI RFC-002 (#128) * MR-969: add stored-query registry config surface Introduce the `queries:` block in omnigraph.yaml — an inline `name -> entry` map of stored queries, per-graph (`graphs.<id>.queries`) and top-level for single-graph mode, mirroring how `policy` is wired in both modes. Each entry points at a `.gq` file and carries optional MCP exposure settings (`expose`, `tool_name`), defaulting to not-exposed. Additive: absent `queries:` leaves current behavior unchanged. - QueryEntry { file, mcp: McpSettings { expose, tool_name } } - `queries` field on TargetConfig + OmnigraphConfig (serde default) - query_entries() / target_query_entries() accessors - resolve_query_file() — base_dir-relative `.gq` path resolution - round-trip + absent-block tests Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add stored-query registry loader and GraphHandle wiring Add a `queries` module: QueryRegistry loads each declared `.gq` entry, parses it, and selects the query whose symbol matches the manifest key, asserting the two agree (key == `query <name>` symbol). Identity is the query name; a key/symbol mismatch is a load-time error. Errors are collected, not fail-fast, so a bad registry surfaces every broken entry at once. Schema type-checking is deliberately left to a separate pass so the loader stays callable without an open engine. Thread an `Option<Arc<QueryRegistry>>` through GraphHandle alongside the per-graph policy; the URI-canonicalizing clone propagates it. Production openers default to None for now — the boot path loads and attaches the registry in a later change. - QueryRegistry::{from_specs, load, lookup, iter}; StoredQuery::is_mutation - GraphHandle.queries field, propagated on canonical clone - registry unit tests: identity match/mismatch, multi-query selection, per-entry parse errors, error collection, mutation classification Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: add RFC-002 config & CLI architecture Layered config (user-global ~/.config/omnigraph/ + per-project), a unifying `target` abstraction resolving to (locus, graph, sub-state, credential) with embedded-URI XOR remote-server loci, multi-server × multi-graph client targeting, credentials by-reference, and the file-naming decision: project and server config are one artifact (`omnigraph.yaml`); the only differently-named file is the user-global `config.yaml`, split by scope not role. Includes the 12-factor bind portability rule (prefer --bind/OMNIGRAPH_BIND over a committed server.bind) and the defined-locally / invoked-remotely model for stored queries. Derived from first principles working backwards from what the engine enables; validated against kube/Helix/git/compose. Linked from docs/dev/index.md. Proposed; phased rollout for the MR-973/974/981 family. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add check() to validate stored queries against the live schema A pure check(registry, catalog) that type-checks every stored query via the same typecheck_query_decl the engine runs for inline queries — no parallel implementation. Failures are collected, not fail-fast, so an operator sees every broken query (e.g. a type/property a migration renamed or removed) in one pass. Breakages are fatal (the boot path will refuse to start); warnings are advisory. Pure over (registry, catalog) so it is callable both at boot (engine catalog) and offline from the CLI without an open engine. Advisory lint: an mcp.expose:true query that declares a Vector(N) parameter warns — an LLM cannot supply a raw embedding vector; such a query should take a String parameter and embed server-side. Warns rather than rejects, since service-to-service callers may pass vectors. - CheckReport { breakages, warnings }; has_breakages / is_clean - tests: valid query, unknown type, unknown property, collect-not-fail-fast, vector-param-exposed warns, unexposed silent Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Drop internal plan-label refs from stored-query config comments Doc comments referenced sequencing labels ("C2") that mean nothing to a reader; reword to describe the behavior directly. Comment-only. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile aliases with the role model in RFC-002 Place the existing client-only `aliases:` block in the client/server role split: aliases are client-role (CLI, embedded, ungated) and may live in both user-global and project config; `queries:` is server-role (deployment manifest only). They overlap as "name -> .gq"; `queries:` is the superset, and the end-state subsumes aliases (definition -> queries, target/branch/format -> client invocation context, positional args -> CLI sugar). v1 keeps aliases unchanged. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: make RFC-002 config global-first, project-optional The global user config is the primary, self-sufficient default; the CLI works from any directory with no project file (the kubectl/aws/gh posture), a deliberate flip from today's project-anchored behavior. The project omnigraph.yaml becomes an optional repo-scoped override and the deployment manifest. Uniform schema, both layers optional; global can hold any section including a personal server's graphs/queries. Additive: project still overrides global; the flip adds a fallback layer below the project file rather than removing it. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: justify XDG ~/.config/omnigraph over legacy ~/.omnigraph in RFC-002 Make the rationale explicit: XDG-first because OmniGraph is a client that will cache remote catalogs and keep session state alongside secrets, and XDG separates config / cache / state into distinct dirs (clear cache without touching creds; backups skip cache) whereas a single ~/.omnigraph/ mixes them. Honor ~/.omnigraph/ as a fallback for the peer-group (aws/kube/docker/helix) expectation. Add XDG_CACHE_HOME / XDG_STATE_HOME to the override precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: build RFC-002 credentials on the existing env-file mechanism OmniGraph already has credentials-by-reference: bearer_token_env names the env var, and auth.env_file is a git-ignored dotenv the CLI auto-loads (real env vars win), resolved via resolve_remote_bearer_token. The RFC's proposed credentials.yaml + token_env were redundant parallel inventions. Reconcile: reuse bearer_token_env (extend to servers.<name>) and auth.env_file (add a global ~/.config/omnigraph/.env layered under the project .env.omni); OS keychain is an additive future resolver. No new credentials.yaml. Updated summary, non-goals, background, file-naming, credentials, example, login, migration, rollout. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: use single ~/.omnigraph dir (Helix-style), not XDG, in RFC-002 Reverse the earlier XDG-first call. The prior argument rested on a false dichotomy (single-dir => mixed config/cache/state); in fact the peer tools (aws, kube, helix) achieve separation via SUBDIRECTORIES inside one ~/.tool/ dir (~/.aws/sso/cache/, ~/.kube/cache/), getting cache hygiene AND one discoverable place. So everything goes under ~/.omnigraph/: config.yaml, credentials (dotenv, 0600), cache/, state/. Lower cognitive load, matches what DB/cloud-CLI users expect, matches Helix. OMNIGRAPH_HOME overrides; $XDG_CONFIG_HOME optionally honored but ~/.omnigraph/ is canonical. Updated all paths, the rationale paragraph, the file-naming table (added a cache/state row), and env precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile RFC-002 with shipped/planned CLI tickets Align with reality found in existing tickets: - Noun is graph/graphs, not target/targets (MR-603 done renamed the config key targets->graphs, flag --graph). Use graphs:/--graph; an entry is embedded (uri) XOR remote (server + remote graph name). - ~/.omnigraph/ confirmed by MR-581 (og template pull, done) which already quick-starts templates there. - Templates already exist (MR-581/MR-531) — not invented here. - The init family is already specced (init, quickstart MR-973, serve MR-970, prune MR-972, mcp install MR-974, agent-mode MR-981); this RFC only adds the user route (~/.omnigraph/config.yaml + login). - aliases: -> operations: planned (MR-839). - bearer_token_env gap tracked in MR-971. - query lint/check already exist (MR-639) — registry validator must not collide with the singular `query check`. Add a Reconciliation section; fix the canonical example to graphs:/--graph. Also: merge semantics refined (deep-merge settings, replace named entries, replace lists, config view --resolved --show-origin). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: correct stale-ticket claims and fold init/bootstrap design into RFC-002 Verify against code, not ticket statuses (MR-581 is marked done but is stale/unbuilt): no ~/.omnigraph usage, no template/serve/quickstart/ prune/login commands exist; config still uses aliases: (no operations:). So ~/.omnigraph/ stands on peer-convention merits alone, and templates are a design question, not a foothold. Add §7.5: the three-tier init model (user route = login + ~/.omnigraph/config.yaml; thin project init; fat quickstart + templates) with first-principles positions (split init/login, in-place refuse-if-exists, interactive vs --auto/agent-mode, --template flag, secrets-on-scaffold gitignore rule). This RFC owns only the user route; the rest are sibling tickets (MR-973/970/972/974/981). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: breadboard + slice Shape A in RFC-002 Add the implementation breadboard (places P1-P5, affordances N1-N14 with NEW markers, mermaid) and five vertical slices for the selected config/ CLI/init shape: V1 global layer + merge engine + config view; V2 remote graphs + HTTP-client path + credential resolution; V3 omnigraph login; V4 init-hardening + quickstart + templates (rides MR-970); V5 agent-mode (MR-981). Rollout reordered to the slice sequence; spikes X1-X4 gate their owning slice. V1-V2 close the substantive client->server gap. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add InvokeQuery Cedar action (coarse, graph-scoped) A per-graph, branch-scoped action that gates invoking a server-side stored query by name. Coarse for now: an `invoke_query` allow rule permits any stored query on the graph; a future, additive refinement adds an optional per-query-name scope without changing rules written against the coarse action. Enforcement is at the HTTP boundary; the engine `_as` writers still enforce read/change per the query body, so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). No call site yet — the invocation handler wires it in a later change (same pattern as Admin/GraphList added ahead of consumers). - variant + as_str/resource_kind(Graph)/FromStr/uses_branch_scope - Cedar schema: invoke_query appliesTo Graph - tests: per-graph allow/deny, branch-scope accepted Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Load and type-check stored queries at server boot, refusing breakage At startup the server now loads each graph's stored-query registry, type-checks every query against that graph's live schema, and refuses to boot if any query references a type/property the schema doesn't have (same posture as bad policy YAML) — so schema drift surfaces at the deploy boundary, not silently at invocation. Non-blocking warnings are logged. The validated registry is attached to the GraphHandle (the two production sites previously held `queries: None`). Loading (parse + key==symbol identity) happens at settings-build time where the config is in scope; the schema type-check happens after each engine opens (single mode in `open_single_with_queries`, multi mode in `open_single_graph`). `open_with_bearer_tokens_and_policy` delegates with an empty registry so its 18 test callers are unchanged; the public `new_*` constructors are unchanged (only the private build path threads the registry). - ServerConfigMode::Single / GraphStartupConfig carry the loaded registry - boot tests: valid registry boots; type-broken query refuses boot + names it Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add `omnigraph queries validate` and `queries list` CLI `queries validate` type-checks the stored-query registry against the live schema offline — it opens the selected graph, runs the same check() the server runs at boot, prints breakages/warnings (human or --json), and exits non-zero on any breakage — so an operator can catch a query broken by a schema change without restarting the server. `queries list` prints each registered query's name, MCP exposure, and typed params. Named `validate` (not `check`) to avoid overlap with the existing `omnigraph lint` — `query check`/`query lint` are already deprecated argv-shims to `lint`. Registry entries resolve like the server: a named graph uses its per-graph `queries:`; otherwise the top-level one. - Queries subcommand group; reuses QueryRegistry::load + check from omnigraph-server; local-only (needs the schema), mirrors lint - tests: clean registry exits 0, broken query exits non-zero + names it, list shows the query and its typed params Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Route registry selection through one shared query_entries_for The "which queries: block applies for graph X" rule existed twice — the server boot path and the CLI's registry_entries — and had already drifted: the CLI carried an unreachable unwrap_or_else fallback the server lacked. Add OmnigraphConfig::query_entries_for(graph: Option<&str>) as the single definition (named graph -> its per-graph block; otherwise top-level) and route all three sites through it: server single mode, server multi-graph loop, and the CLI. The CLI's dead fallback arm is deleted; CLI and server now resolve identically by construction. No behavior change. Extends the config round-trip test to pin the selector, including the unknown-name -> top-level fallback the deleted CLI arm covered. * Funnel registry validation through one validate_and_attach gate The check -> refuse-on-breakage -> log-warnings -> empty->None block was copy-pasted across both open paths (single mode and the multi-graph per-graph open), differing only by the graph label. A third opener could attach a registry that was never schema-checked. Extract validate_and_attach(queries, catalog, label) -> Option<Arc<..>> as the single gate both paths call, so attaching an unchecked registry is no longer expressible. The catalog handle is an owned Arc, so calling it before the multi-mode policy match (which rebinds db) is borrow-clean. No behavior change. Adds a direct unit test of the helper (empty / clean / breakage incl. the graph label in the message) — covering the multi-graph path's logic, which previously had no boot-refusal coverage. * Resolve param types structurally in the MCP vector lint The exposed-query advisory detected vector params with type_name.starts_with("Vector(") — a second copy of the compiler's own ScalarType::from_str_name vector parsing that could drift from it. Key the lint off PropType::from_param_type_name + ScalarType::Vector(_) instead, the one canonical resolver the type system already uses. Any future param-suppliability lint now reads the structured type rather than scanning the surface string. Behavior-preserving: the grammar forbids list-of-vector params (list_type = "[" base_type "]", and base_type excludes Vector), so the only input where the structured and string checks could differ is unparseable. Adds a guard test that an exposed String param does not false-trigger the warning. * Refuse duplicate MCP tool names across exposed stored queries The effective MCP tool name (explicit tool_name, else the query name) is a second identity namespace beside the registry key, but nothing enforced it unique — two exposed queries could claim one catalog key, and each consumer re-derived the name ad hoc. Add StoredQuery::effective_tool_name() as the one definition, and a load-time uniqueness pass in from_specs over exposed queries: a collision is a collected LoadError naming the loser and the winner. Scoped to exposed queries (unexposed have no MCP tool); deterministic over the BTreeMap so the first-declared wins and the error order is stable. New (rare) refusal: a config with colliding exposed tool names now fails `omnigraph queries validate` offline and refuses server boot, the same posture as a malformed registry. Release-note-worthy. Test-first: duplicate_exposed_tool_name_is_a_load_error (red before the pass, green after) + a CLI offline test; the unexposed sibling pins the exposed-only scope; effective_tool_name asserts folded into the load test. * docs: document the queries registry, CLI, and invoke_query action The stored-query surface shipped without user docs. Add it, per the same-PR maintenance contract: - policy.md: invoke_query as per-graph action #10 (branch-scoped), with the double-gating note; renumber graph_list; add it to the branch_scope list. - cli-reference.md: the `queries validate | list` command, and the `queries:` config block (per-graph + top-level) with mcp.expose/tool_name and the tool-name uniqueness rule. - server.md: boot-time stored-query type-check (refuse on breakage), noting invocation over HTTP/MCP is not yet exposed. * Add POST /queries/{name} stored-query invocation handler Invoke a curated server-side stored query by name: source + name come from the per-graph queries: registry, the client sends only runtime inputs (params, branch, snapshot). Gated by the invoke_query Cedar action at the boundary; the handler delegates to the existing run_query/run_mutate, whose inner Read/Change enforce still runs — so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). - InvokeStoredQueryRequest + an untagged InvokeStoredQueryResponse { Read(ReadOutput), Change(ChangeOutput) } → one Json<_> return type and a oneOf 200 schema (a correct contract, not a wrong-but-simple one). - Route lives in per_graph_protected → single-mode /queries/{name} and multi-mode /graphs/{id}/queries/{name} for free. - Deny == unknown: an invoke_query denial and a missing query both return the same 404, so the catalog can't be probed by an unauthorized caller. - OpenAPI regenerated; tests cover read, mutation double-gate (403 vs 200), bad-param 400, and the identical-404 deny path. Completes the MR-969 V1 invocation slice (registry + /queries/{name} + invoke_query). * docs: stored-query invocation endpoint; flip the not-yet-exposed caveat Now that POST /queries/{name} ships (C7), document it: add the endpoint to server.md's inventory + an invocation section (body, untagged read/mutate envelope, invoke_query gate, double-gated mutations, deny == 404), and flip the startup note that said invocation was not yet exposed. In policy.md, replace "no invocation call site yet" on the invoke_query action with a pointer to the endpoint. * Scope the stored-query 404-hiding claim to non-invoke_query callers Review found the deny==404 catalog-hiding was overstated as a contract: it holds only at the outer invoke_query gate. A caller that HOLDS invoke_query but lacks read/change gets the inner gate's 403 for an existing query vs 404 for an unknown one — so existence is visible to grant-holders by design (the intended double-gate). The handler docstring, OpenAPI 404 description, and server.md all claimed the 404 was airtight against any denied actor. Correct the wording in all three (no behavior change) and add the missing symmetric test (invoke_query but no read -> 403 for an existing query, 404 for unknown) so the actual contract is pinned. Also document that in default-deny mode (tokens, no policy) every invocation 404s until an invoke_query rule is configured. Nits: the from_specs collision comment said "first declared wins" but it is lexicographically-first by name (BTreeMap); the effective_tool_name docstring overclaimed the CLI display routes through it (it resolves the rule on its own output DTO). * Default mcp.expose to true (the manifest entry is the opt-in) expose controls MCP-catalog membership only — it is not an authorization gate (invocation is gated by invoke_query regardless). So requiring a per-query mcp.expose: true was friction with no safety benefit: a non-exposed query is still HTTP-invocable by name. Flip the default so declaring a query in the manifest exposes it to the agent tool catalog by default; expose: false is the escape hatch for service-only queries. Both the absent-mcp path (Default impl) and the present-but-no-expose path (serde default fn) now yield true. Doc comments + cli-reference updated; the config round-trip test asserts the new default. * Add GET /queries stored-query catalog endpoint List a graph's mcp.expose stored queries as a typed tool catalog so a client (the MCP server) can register them as tools without fetching .gq source. Each entry carries name, MCP tool_name, description/instruction, a read/mutate flag, and decomposed typed params (kind enum: string|bool|int| bigint|float|date|datetime|blob|vector|list, plus item_kind for lists and vector_dim) — so the consumer builds an input schema with a closed match and never re-parses omnigraph type spelling. I64/U64 are bigint (string on the wire): a JSON number loses precision past 2^53 and the engine already accepts decimal strings. Read-gated (works in default-deny; the catalog is graph-wide, authorized against main). NOT Cedar-filtered per query yet — a reader can list a query whose invoke_query they lack (documented gap until per-query authz lands); invocation stays invoke_query-gated + deny==404. - api: QueriesCatalogOutput / QueryCatalogEntry / ParamDescriptor / ParamKind + query_catalog_entry (reuses PropType::from_param_type_name; scalar_kind is exhaustive, so a new ScalarType is a compile error here until catalogued). - GET /queries route in per_graph_protected (→ /graphs/{id}/queries in multi mode); OpenAPI regenerated; path allowlists updated. - Tests: projection unit (every kind, list, vector, nullable, mutation, empty) + handler (exposed-only filter, read-gate probe-oracle, empty registry). * docs: GET /queries stored-query catalog endpoint Document the catalog: the endpoint table row (GET /queries, read-gated), a catalog section (typed-param kind enum, bigint/date/datetime/blob-as-string, graph-wide/branch-independent, mcp.expose default true, the read-gated probe-oracle gap), and flip the startup note now that the catalog ships. * Collect file-I/O and parse errors in QueryRegistry::load in one pass load() early-returned on any unreadable .gq file, masking parse / identity / tool-name-collision errors in the OTHER (readable) files — so an operator fixed the missing file, restarted, and only then saw the next broken query. Now it collects I/O errors but still runs from_specs on the readable specs and returns the union, so every broken entry surfaces at once (matching the collected-errors contract the rest of the registry already follows). Safe: from_specs' tool-name collision check runs over loaded queries only, so dropping an I/O-failed entry can only under-report a collision, never invent one. I/O errors are ordered first (BTreeMap key order), then spec errors. Adds a load-level test (tempdir: a valid, a missing, and a parse-broken .gq) asserting all three surface in one Err — confirmed red before the fix. * Make invoke_query graph-scoped (one branch authority) invoke_query gates reaching the curated stored-query surface — a graph-level capability. Per-branch/snapshot access is already enforced by the inner read/change gate in run_query/run_mutate (authorized against the resolved branch), so branch-scoping the outer gate was redundant AND wrong for snapshot reads (it defaulted to main). Drop the branch dimension: remove InvokeQuery from uses_branch_scope (it joins admin as graph-scoped) and authorize the boundary gate with branch: None. Lossless: an actor confined to branch X by their read/change rules can still only invoke a stored query that touches X. A rule that sets branch_scope on invoke_query is now rejected by validate() — write invoke_query in its own rule. Ripple (atomic): restructure the server invoke fixture so invoke_query sits in its own branch_scope-free rule; invert invoke_query_is_branch_scoped -> invoke_query_rejects_branch_scope; the per-graph authorize test uses branch: None; docs (policy.md, server.md, the InvokeQuery doc). No wire/OpenAPI change. * Resolve graph config by identity, not server mode Which policy/queries block applies for a graph was decided three different, mode-dependent ways: single-mode boot used top-level even for a named graph; multi-mode used per-graph (and silently ignored a top-level queries block); the CLI used per-graph for a named target. So `queries validate --target prod` could check a different registry than the single-mode server loaded, and a named graph's per-graph policy/queries were silently shadowed. Make config a function of graph IDENTITY: a graph served by NAME (--target/server.graph, a graphs: entry) uses its own graphs.<name>.{policy, queries}; a bare URI is anonymous and uses top-level. One rule, applied by single-mode boot, multi-mode boot, and the CLI — so they can't diverge and the CLI predicts the server exactly. No silent ignore: serving a named graph while a top-level policy/queries block is populated now refuses boot, naming the block (the multi-mode top-level-policy bail, extended to queries and to single-mode-named). The CLI's `queries validate` derives the schema URI and the registry from ONE selection, and a positional URI forces anonymous (ignoring cli.graph) so the two can't come from different graphs. BREAKING (released behavior): single mode by name (--target/server.graph) with top-level policy/queries previously used top-level; it now uses the per-graph block and refuses boot if top-level is also populated. Bare-URI single mode is unchanged. Loud, with migration text pointing at graphs.<name>. - config: resolve_policy_file_for (policy sibling of query_entries_for, no top-level fallback) + populated_top_level_blocks for the coherence check. - characterization tests (single-mode named -> per-graph; named + top-level -> bail; multi-mode top-level queries -> bail; CLI positional-URI -> top-level). - docs: policy.md, server.md, cli-reference.md. * docs: RFC-002 credentials keyed by server name (keychain/profile/env) Reworks the RFC's credentials model: secrets are keyed by server name — OS keychain `omnigraph:<server>` (preferred) -> a `[<server>]` profile in `~/.omnigraph/credentials` -> `OMNIGRAPH_TOKEN[_<SERVER>]` env (CI), the AWS/gh/kube model. `servers.<name>` is endpoint-only by default but may carry an explicit, secret-free `auth: { token: { env|file|command|keychain } }` source. The shipped `bearer_token_env` + `.env.omni` dotenv remain a legacy compat path; no `credentials.yaml`. * docs: RFC-002 — typed graph locator (storage/server/graph_id), not a uri string Add §1.1: the resolved graph address is a typed GraphLocator (Embedded{storage} | Remote{server, graph_id}), not a flat uri: String. Diagnoses the string model's cost in the code today (~16 is_remote_uri forks, TargetConfig can't express multi-server x multi-graph, the CLI bails on remote, the ts SDK models baseUrl+graphId separately) and settles the YAML naming so the key names the locus: - storage: (embedded) — shipped uri: is a deprecated alias - server: + graph_id: (remote) — graph_id defaults to the entry key - storage xor server, reject both/neither (no silent ambiguity) Kills the graphs:/graph: collision and the uri:-might-be-a-server ambiguity. Updates the §1/§8 examples and the entry-shape notes to the new naming. * Test: queries list must reject an unknown --target queries list opens no graph URI, so unknown-graph validation does not ride along on resolve_target_uri the way it does for every other command. The new test reproduces the gap: with an unknown --target the command currently exits 0 and prints the (empty) top-level registry instead of erroring like the URI-resolving commands do. Fails against current code; the fix follows. * Validate the graph selection in queries list Graph-existence validation was a side effect of URI resolution: every URI-resolving command rejects an unknown --target via resolve_target_uri, but queries list opens no URI, so query_entries_for(Some(unknown)) silently fell back to the top-level registry and showed the wrong (or empty) catalog. Make membership a property of the selection: add the fallible resolve_graph_selection alongside the infallible query_entries_for (a known name passes through, an unknown name errors with the same message as resolve_target_uri, None stays anonymous), and validate the selection in execute_queries_list. query_entries_for is unchanged — server boot's bare-URI path still needs its None -> top-level arm. * Surface policy-engine errors from stored-query invoke The invoke handler mapped every authorize_request failure to 404 ('stored query not found'), which collapsed the authorization decision (deny -> 403) together with operational failures (no actor -> 401, Cedar evaluation error -> 500). A real policy-engine 500 was hidden as a missing query. Separate the two concerns instead of sniffing the masked status. Extract authorize() returning an Authz { Allowed, Denied(msg) } decision and reserve Err for operational failures only; authorize_request becomes a thin wrapper that maps Denied -> 403, so the 16 deny-as-403 callers are unchanged. The invoke handler now matches the decision directly: a denial stays 404 (deny == missing, so the catalog can't be probed without the grant), while a 401/500 propagates with its true status. 500 is now a reachable outcome on POST /queries/{name}; document it in the endpoint responses and regenerate openapi.json. * Extract the named-graph/top-level coherence rule into one helper The rule 'a named graph uses its own graphs.<name> block, so a populated top-level block is a config error' lived inline in single-mode server boot. Extract it to OmnigraphConfig::ensure_top_level_blocks_honored so the same definition can be shared by the CLI selection gate (next commit) and the two can't drift. Boot calls the helper; the message is reworded context-neutral (drops 'serving') so it reads correctly from both boot and the CLI. Behavior-preserving: multi-graph mode keeps its own unconditional check, and single_mode_named_graph_rejects_top_level_blocks still passes. * Test: queries validate/list must reject a named graph with a top-level block Server boot refuses a config where a graph is selected by name yet a top-level queries:/policy.file block is populated (the block would be silently ignored). The CLI's queries validate/list resolve the same named selection but skip that coherence check, so they give a false green / list the per-graph block. The new test reproduces it: validate prints OK and list succeeds where boot would refuse. Fails against current code; the fix follows. * Enforce top-level coherence in the single CLI selection gate queries validate validated graph membership only as a side effect of URI resolution and queries list only via resolve_graph_selection's membership check; neither applied the named-graph/top-level coherence rule server boot enforces, so both gave a false green on a config boot refuses. Fold ensure_top_level_blocks_honored into resolve_graph_selection so it is the single gate that returns only valid + server-coherent selections, and route resolve_selected_graph (queries validate) through it; queries list already calls the gate. A named graph with a populated top-level block now errors in both commands, matching boot. A positional URI stays anonymous (top-level honored), so queries_validate_positional_uri_ignores_default_graph is unaffected. * docs: RFC-003 — MCP server surface for omnigraph-server Detailed MCP-transport design for the stored-query/MCP work, building on the shipped #128 registry. Corrects the draft against the branch head: the coarse invoke_query gate + 404 denial-masking are already wired (server_invoke_query), so per-query invoke_query scope (PolicyRequest has no query-name dimension yet) is the real prerequisite; positions the doc as superseding rfc-001's MCP transport (/mcp/tools+/mcp/invoke) and reconciles the shipped mcp.expose YAML form and the schema-introspection non-goal; grounds the parity surface in the actual omnigraph-ts package (13 tools with read/change ids, 2 resources). * docs(config): clarify graph config boundaries * fix(config): enforce graph-scoped policies and query validation * fix(cli): require graph selection for scoped query registries * fix(server): preserve named graph id in single mode policy * fix(cli): share graph identity for policy resolution * test(cli): cover policy tooling server graph selection * fix(cli): honor server graph for policy tooling --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-01 22:50:31 +02:00
```rust
// New — the single source of truth
fn classify(r: Result<CallToolResult, ApiError>) -> Result<CallToolResult, McpError> {
match r {
Ok(out) => Ok(out),
// Semantic failures (bad params, validation, business 4xx/409) → isError result,
// fed back to the model so it self-corrects (MCP 2025-11-25 SEP-1303).
Err(e) if e.status_code().is_client_error() => Ok(CallToolResult::error(vec![Content::text(e.message_str())])),
// Operational failures (5xx) → JSON-RPC protocol error.
Err(e) => Err(McpError::internal_error(e.message_str().to_owned(), None)),
}
}
```
Two cases are protocol errors, not `isError`, so the catalog isn't probeable and
malformed calls are unambiguous: an **unknown OR denied tool** returns an identical
`McpError::invalid_params("unknown tool: <name>")` (`-32602`), and a structurally
malformed call (failing the `tools/call` shape) is a protocol error. A missing/bad
bearer is an HTTP `401` at the boundary, before rmcp.
## 12. Code-mode compatibility
"Code mode" (Anthropic's *Code execution with MCP*; Cloudflare's *Code Mode*) is a
**client/runtime** technique: the client compiles a server's tools into a typed code
API (TS modules / a sandbox), the model writes code against it, and intermediate
results are filtered in the sandbox instead of round-tripping through the model
context (reported ~98% context savings on large workflows). It runs over **standard
`tools/list` + `tools/call`** and **requires no new server endpoints**; credentials
stay in the transport and the runtime holds them (the sandbox never sees the bearer).
The server's job is to be a *good source* for that compilation. Concrete server-side
choices this RFC adopts:
1. **Strict, fully-typed `input_schema`** (§9.1) with `additionalProperties: false`,
enums for `mode`/`format`, explicit `required` — these compile into precise TS
input types.
2. **Structured output** — see §13.1: declare `outputSchema` and return
`structuredContent` so generated code gets typed *returns*, not `any`.
3. **Stable, descriptive tool names + rich descriptions** (§10) — names become
function names; descriptions become doc comments.
4. **Progressive disclosure for large catalogs** — the `meta` projection mode (§9.2)
keeps `tools/list` small (`stored_query_list` + `stored_query_run`), the same
`search` + `execute` shape code-mode runtimes prefer.
docs(rfc-003): fold external review into correct-by-design fixes An external review pass raised 8 findings; verified 7 valid (2 confirmed against the engine coercer). Folded them in as class-closing fixes rather than point patches: - §9.1 (③④, the headline): the JSON-Schema generator was a second hand-written copy of the engine's input contract — Blob (base64 vs URI string) and nullable (explicit null) were two drifts of one class. Move the projection to a single param_json_schema in omnigraph-api-types (next to ParamKind/ParamDescriptor), fix Blob -> {"type":"string","format":"uri"} (query_input.rs:449 / api-types:354 say blob-URI string) and nullable -> anyOf[..,null] (query_input.rs:273,296), and lock it to json_value_to_literal_typed with a schema/engine equivalence test so any future drift is a CI failure. - §7/§4 (①): replace the fail-open "empty allowed_origins => skip" with a total OriginPolicy and a single McpHostPolicy::from_bind constructor (remote default DenyBrowsers, enforced by origin_guard independent of rmcp's empty-list quirk). No absent-=>-skip state can be constructed. - §6/§12/§16 (②): make the non-paginated list seam a stated contract (Vec<T>, no nextCursor; meta mode bounds large catalogs) and drop the pagination claims the signature couldn't express. - §9.3 (⑦): built-in/stored tool-name collision becomes a cluster validate/boot error (fold built-in names into the registry uniqueness check), not a silent skip — per the invariants deny-list. - §9.2 (⑥): stored_query_mode folded into the one per-graph mcp: block (Phase 6), not a floating key; not configurable until that surface exists. - §10/§1 (⑧): scope derives from the per-graph mount; server-scoped `health` becomes graph-scoped `graph_health` (server liveness stays REST /healthz). - §13 (⑤, doc-only): OpenAI row corrected to the `authorization` field; Phase-1 reachability via static bearer is unchanged. §17 records the locked decisions; the validation header notes the review pass.
2026-06-16 17:34:00 +02:00
5. **Bounded `tools/list` instead of pagination.** The list seam is non-paginated by
contract (§6); a large catalog is bounded by the `meta` mode (§9.2), not by cursor
paging. This keeps the seam type honest (no `nextCursor` the `Vec<T>` return can't
carry) while still preventing context blow-up on big query catalogs.
6. **Schemas as resources** (§14) — expose the graph schema (and per-query param
schemas) as MCP resources, the on-demand channel code-mode clients pull from.
7. **Auth in the transport only** — never require secrets as tool *arguments* (that
would put them in model context / generated code and break the sandbox's credential
isolation).
The server deliberately does **not** build TS-wrapper generation, sandboxes, tool
search/deferral, or PII tokenization — those are client/runtime concerns, and there is
no ratified "tools-as-code" MCP spec to target.
## 13. Provider compatibility
**Transport: Streamable HTTP is the universal target** — every current client below
supports it for remote servers, and it is the recommended transport over deprecated
HTTP+SSE.
**Auth splits the ecosystem into two tiers:**
| Client | Remote transport | Auth that works | Notes |
|---|---|---|---|
| **Claude Code** (CLI) | Streamable HTTP | static bearer header **and** OAuth 2.1 | `claude mcp add --transport http <url>/mcp --header "Authorization: Bearer …"`. Advertising RFC-9728 can override the static header (issue #59467) — gate PRM. |
| **Cursor** | Streamable HTTP | static header **and** OAuth 2.1 | `"headers": {"Authorization": "Bearer ${env:…}"}` in `mcp.json`. |
| **VS Code** (Copilot agent) | Streamable HTTP | static header **and** OAuth | needs VS Code ≥ 1.101 for remote + OAuth; auto-detects `401` → sign-in. |
| **OpenCode** | remote HTTP | static header **and** OAuth (auto, DCR) | `mcp` block in `opencode.json`; auto-prefixes tools `omnigraph_…`; **no progressive disclosure** → keep the static surface tight (favors `meta` mode at scale). |
| **Claude Messages API** (`mcp_servers`) | Streamable HTTP (+SSE) | pre-acquired token via `authorization_token` | forwards a token; never runs OAuth. Static bearer fits directly. Pin the beta header you target. |
docs(rfc-003): fold external review into correct-by-design fixes An external review pass raised 8 findings; verified 7 valid (2 confirmed against the engine coercer). Folded them in as class-closing fixes rather than point patches: - §9.1 (③④, the headline): the JSON-Schema generator was a second hand-written copy of the engine's input contract — Blob (base64 vs URI string) and nullable (explicit null) were two drifts of one class. Move the projection to a single param_json_schema in omnigraph-api-types (next to ParamKind/ParamDescriptor), fix Blob -> {"type":"string","format":"uri"} (query_input.rs:449 / api-types:354 say blob-URI string) and nullable -> anyOf[..,null] (query_input.rs:273,296), and lock it to json_value_to_literal_typed with a schema/engine equivalence test so any future drift is a CI failure. - §7/§4 (①): replace the fail-open "empty allowed_origins => skip" with a total OriginPolicy and a single McpHostPolicy::from_bind constructor (remote default DenyBrowsers, enforced by origin_guard independent of rmcp's empty-list quirk). No absent-=>-skip state can be constructed. - §6/§12/§16 (②): make the non-paginated list seam a stated contract (Vec<T>, no nextCursor; meta mode bounds large catalogs) and drop the pagination claims the signature couldn't express. - §9.3 (⑦): built-in/stored tool-name collision becomes a cluster validate/boot error (fold built-in names into the registry uniqueness check), not a silent skip — per the invariants deny-list. - §9.2 (⑥): stored_query_mode folded into the one per-graph mcp: block (Phase 6), not a floating key; not configurable until that surface exists. - §10/§1 (⑧): scope derives from the per-graph mount; server-scoped `health` becomes graph-scoped `graph_health` (server liveness stays REST /healthz). - §13 (⑤, doc-only): OpenAI row corrected to the `authorization` field; Phase-1 reachability via static bearer is unchanged. §17 records the locked decisions; the validation header notes the review pass.
2026-06-16 17:34:00 +02:00
| **OpenAI Responses API** (`mcp` tool) | Streamable HTTP (+SSE) | pre-acquired token via the dedicated `authorization` field | forwards the token on `Authorization` (static bearer fits directly); never runs OAuth. `require_approval` gates tool calls. (Current docs expose `authorization`, not a free-form `headers` object — ⑤.) |
| **ChatGPT** (developer mode/connectors) | Streamable HTTP (+SSE) | OAuth, **No-Auth**, or Mixed | beta; OAuth is the clean path. |
| **Claude Desktop** (custom connectors) | Streamable HTTP (+SSE) | **OAuth 2.1 or authless** | no static-header field — bearer-only deployments are unreachable without a gateway. |
| **Claude.ai web** (custom connectors) | Streamable HTTP (+SSE) | **OAuth 2.1 + RFC 9728** (or authless) | server **must** serve RFC-9728 PRM; no static-header field. |
**Phased auth recommendation:**
- **Phase 1 — static bearer (this RFC).** Reaches Claude Code, Cursor, VS Code
Copilot, OpenCode, the Claude Messages API connector, and the OpenAI Responses API —
the entire developer/agent/API tier. This is the correct launch posture.
- **Phase 2 — OAuth 2.1 + RFC 9728 (MR-956, additive).** Required to reach **claude.ai
web** and **Claude Desktop** custom connectors and the clean ChatGPT path. The same
endpoint accepts validated OAuth access tokens and (still) static bearers; PRM
advertisement stays config-gated because of the #59467 header-override behavior.
Because the resource server validates whatever token arrives on `Authorization`,
both tiers hit one endpoint with no MCP-layer branching.
### 13.1 Result shaping & structured output
For typed, machine-consumable results (`graph_query`, stored-query reads,
`branch_list`, `commit_*`, `schema_get`) the tool declares an **`outputSchema`** and
returns **`structuredContent`** (the route's existing `ReadOutput` / listing DTOs,
which already derive `ToSchema`), **and also** mirrors the JSON in a text `Content`
block for clients that don't parse structured content. Plain text-JSON is used where a
fixed schema is awkward. (Some clients still mishandle `structuredContent: null`
emit an empty object, never `null`, when there is no structured payload.)
## 14. Resources
Two resources: `omnigraph://schema` (`Read` → schema `.pg` text) and
`omnigraph://branches` (`Read` → branches JSON). Both are Cedar-filtered and
deny-masked exactly like tools — a locked-down agent denied `Read` never sees them,
which is how the "agents don't introspect schema" intent is met by *policy*, not
omission. Advertise the `resources` capability with `subscribe:false,
listChanged:false` (both handlers are backed — don't advertise a capability whose
`read` would 404). Exposing the schema as a resource is also the on-demand channel
code-mode clients pull from (§12).
No `omnigraph://graphs` resource and no `graphs_list` tool — server-scoped graph
discovery stays REST-only via `GET /graphs` (§15).
## 15. Routing — `Reuses` `build_app`
`/mcp` is merged **into `per_graph_protected`**, which `build_app` always nests under
`/graphs/{graph_id}`. RFC-011 made the server **cluster-only** — there is no flat
single-graph route group and no `match state.routing()`, so `/mcp` is **always**
`/graphs/{graph_id}/mcp` (even a single-graph boot builds a one-graph registry keyed
by `default`; `GraphRouting` is now `{ registry, config_path }`):
Stored-query registry foundation + config/CLI RFC-002 (#128) * MR-969: add stored-query registry config surface Introduce the `queries:` block in omnigraph.yaml — an inline `name -> entry` map of stored queries, per-graph (`graphs.<id>.queries`) and top-level for single-graph mode, mirroring how `policy` is wired in both modes. Each entry points at a `.gq` file and carries optional MCP exposure settings (`expose`, `tool_name`), defaulting to not-exposed. Additive: absent `queries:` leaves current behavior unchanged. - QueryEntry { file, mcp: McpSettings { expose, tool_name } } - `queries` field on TargetConfig + OmnigraphConfig (serde default) - query_entries() / target_query_entries() accessors - resolve_query_file() — base_dir-relative `.gq` path resolution - round-trip + absent-block tests Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add stored-query registry loader and GraphHandle wiring Add a `queries` module: QueryRegistry loads each declared `.gq` entry, parses it, and selects the query whose symbol matches the manifest key, asserting the two agree (key == `query <name>` symbol). Identity is the query name; a key/symbol mismatch is a load-time error. Errors are collected, not fail-fast, so a bad registry surfaces every broken entry at once. Schema type-checking is deliberately left to a separate pass so the loader stays callable without an open engine. Thread an `Option<Arc<QueryRegistry>>` through GraphHandle alongside the per-graph policy; the URI-canonicalizing clone propagates it. Production openers default to None for now — the boot path loads and attaches the registry in a later change. - QueryRegistry::{from_specs, load, lookup, iter}; StoredQuery::is_mutation - GraphHandle.queries field, propagated on canonical clone - registry unit tests: identity match/mismatch, multi-query selection, per-entry parse errors, error collection, mutation classification Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: add RFC-002 config & CLI architecture Layered config (user-global ~/.config/omnigraph/ + per-project), a unifying `target` abstraction resolving to (locus, graph, sub-state, credential) with embedded-URI XOR remote-server loci, multi-server × multi-graph client targeting, credentials by-reference, and the file-naming decision: project and server config are one artifact (`omnigraph.yaml`); the only differently-named file is the user-global `config.yaml`, split by scope not role. Includes the 12-factor bind portability rule (prefer --bind/OMNIGRAPH_BIND over a committed server.bind) and the defined-locally / invoked-remotely model for stored queries. Derived from first principles working backwards from what the engine enables; validated against kube/Helix/git/compose. Linked from docs/dev/index.md. Proposed; phased rollout for the MR-973/974/981 family. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add check() to validate stored queries against the live schema A pure check(registry, catalog) that type-checks every stored query via the same typecheck_query_decl the engine runs for inline queries — no parallel implementation. Failures are collected, not fail-fast, so an operator sees every broken query (e.g. a type/property a migration renamed or removed) in one pass. Breakages are fatal (the boot path will refuse to start); warnings are advisory. Pure over (registry, catalog) so it is callable both at boot (engine catalog) and offline from the CLI without an open engine. Advisory lint: an mcp.expose:true query that declares a Vector(N) parameter warns — an LLM cannot supply a raw embedding vector; such a query should take a String parameter and embed server-side. Warns rather than rejects, since service-to-service callers may pass vectors. - CheckReport { breakages, warnings }; has_breakages / is_clean - tests: valid query, unknown type, unknown property, collect-not-fail-fast, vector-param-exposed warns, unexposed silent Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Drop internal plan-label refs from stored-query config comments Doc comments referenced sequencing labels ("C2") that mean nothing to a reader; reword to describe the behavior directly. Comment-only. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile aliases with the role model in RFC-002 Place the existing client-only `aliases:` block in the client/server role split: aliases are client-role (CLI, embedded, ungated) and may live in both user-global and project config; `queries:` is server-role (deployment manifest only). They overlap as "name -> .gq"; `queries:` is the superset, and the end-state subsumes aliases (definition -> queries, target/branch/format -> client invocation context, positional args -> CLI sugar). v1 keeps aliases unchanged. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: make RFC-002 config global-first, project-optional The global user config is the primary, self-sufficient default; the CLI works from any directory with no project file (the kubectl/aws/gh posture), a deliberate flip from today's project-anchored behavior. The project omnigraph.yaml becomes an optional repo-scoped override and the deployment manifest. Uniform schema, both layers optional; global can hold any section including a personal server's graphs/queries. Additive: project still overrides global; the flip adds a fallback layer below the project file rather than removing it. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: justify XDG ~/.config/omnigraph over legacy ~/.omnigraph in RFC-002 Make the rationale explicit: XDG-first because OmniGraph is a client that will cache remote catalogs and keep session state alongside secrets, and XDG separates config / cache / state into distinct dirs (clear cache without touching creds; backups skip cache) whereas a single ~/.omnigraph/ mixes them. Honor ~/.omnigraph/ as a fallback for the peer-group (aws/kube/docker/helix) expectation. Add XDG_CACHE_HOME / XDG_STATE_HOME to the override precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: build RFC-002 credentials on the existing env-file mechanism OmniGraph already has credentials-by-reference: bearer_token_env names the env var, and auth.env_file is a git-ignored dotenv the CLI auto-loads (real env vars win), resolved via resolve_remote_bearer_token. The RFC's proposed credentials.yaml + token_env were redundant parallel inventions. Reconcile: reuse bearer_token_env (extend to servers.<name>) and auth.env_file (add a global ~/.config/omnigraph/.env layered under the project .env.omni); OS keychain is an additive future resolver. No new credentials.yaml. Updated summary, non-goals, background, file-naming, credentials, example, login, migration, rollout. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: use single ~/.omnigraph dir (Helix-style), not XDG, in RFC-002 Reverse the earlier XDG-first call. The prior argument rested on a false dichotomy (single-dir => mixed config/cache/state); in fact the peer tools (aws, kube, helix) achieve separation via SUBDIRECTORIES inside one ~/.tool/ dir (~/.aws/sso/cache/, ~/.kube/cache/), getting cache hygiene AND one discoverable place. So everything goes under ~/.omnigraph/: config.yaml, credentials (dotenv, 0600), cache/, state/. Lower cognitive load, matches what DB/cloud-CLI users expect, matches Helix. OMNIGRAPH_HOME overrides; $XDG_CONFIG_HOME optionally honored but ~/.omnigraph/ is canonical. Updated all paths, the rationale paragraph, the file-naming table (added a cache/state row), and env precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile RFC-002 with shipped/planned CLI tickets Align with reality found in existing tickets: - Noun is graph/graphs, not target/targets (MR-603 done renamed the config key targets->graphs, flag --graph). Use graphs:/--graph; an entry is embedded (uri) XOR remote (server + remote graph name). - ~/.omnigraph/ confirmed by MR-581 (og template pull, done) which already quick-starts templates there. - Templates already exist (MR-581/MR-531) — not invented here. - The init family is already specced (init, quickstart MR-973, serve MR-970, prune MR-972, mcp install MR-974, agent-mode MR-981); this RFC only adds the user route (~/.omnigraph/config.yaml + login). - aliases: -> operations: planned (MR-839). - bearer_token_env gap tracked in MR-971. - query lint/check already exist (MR-639) — registry validator must not collide with the singular `query check`. Add a Reconciliation section; fix the canonical example to graphs:/--graph. Also: merge semantics refined (deep-merge settings, replace named entries, replace lists, config view --resolved --show-origin). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: correct stale-ticket claims and fold init/bootstrap design into RFC-002 Verify against code, not ticket statuses (MR-581 is marked done but is stale/unbuilt): no ~/.omnigraph usage, no template/serve/quickstart/ prune/login commands exist; config still uses aliases: (no operations:). So ~/.omnigraph/ stands on peer-convention merits alone, and templates are a design question, not a foothold. Add §7.5: the three-tier init model (user route = login + ~/.omnigraph/config.yaml; thin project init; fat quickstart + templates) with first-principles positions (split init/login, in-place refuse-if-exists, interactive vs --auto/agent-mode, --template flag, secrets-on-scaffold gitignore rule). This RFC owns only the user route; the rest are sibling tickets (MR-973/970/972/974/981). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: breadboard + slice Shape A in RFC-002 Add the implementation breadboard (places P1-P5, affordances N1-N14 with NEW markers, mermaid) and five vertical slices for the selected config/ CLI/init shape: V1 global layer + merge engine + config view; V2 remote graphs + HTTP-client path + credential resolution; V3 omnigraph login; V4 init-hardening + quickstart + templates (rides MR-970); V5 agent-mode (MR-981). Rollout reordered to the slice sequence; spikes X1-X4 gate their owning slice. V1-V2 close the substantive client->server gap. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add InvokeQuery Cedar action (coarse, graph-scoped) A per-graph, branch-scoped action that gates invoking a server-side stored query by name. Coarse for now: an `invoke_query` allow rule permits any stored query on the graph; a future, additive refinement adds an optional per-query-name scope without changing rules written against the coarse action. Enforcement is at the HTTP boundary; the engine `_as` writers still enforce read/change per the query body, so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). No call site yet — the invocation handler wires it in a later change (same pattern as Admin/GraphList added ahead of consumers). - variant + as_str/resource_kind(Graph)/FromStr/uses_branch_scope - Cedar schema: invoke_query appliesTo Graph - tests: per-graph allow/deny, branch-scope accepted Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Load and type-check stored queries at server boot, refusing breakage At startup the server now loads each graph's stored-query registry, type-checks every query against that graph's live schema, and refuses to boot if any query references a type/property the schema doesn't have (same posture as bad policy YAML) — so schema drift surfaces at the deploy boundary, not silently at invocation. Non-blocking warnings are logged. The validated registry is attached to the GraphHandle (the two production sites previously held `queries: None`). Loading (parse + key==symbol identity) happens at settings-build time where the config is in scope; the schema type-check happens after each engine opens (single mode in `open_single_with_queries`, multi mode in `open_single_graph`). `open_with_bearer_tokens_and_policy` delegates with an empty registry so its 18 test callers are unchanged; the public `new_*` constructors are unchanged (only the private build path threads the registry). - ServerConfigMode::Single / GraphStartupConfig carry the loaded registry - boot tests: valid registry boots; type-broken query refuses boot + names it Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add `omnigraph queries validate` and `queries list` CLI `queries validate` type-checks the stored-query registry against the live schema offline — it opens the selected graph, runs the same check() the server runs at boot, prints breakages/warnings (human or --json), and exits non-zero on any breakage — so an operator can catch a query broken by a schema change without restarting the server. `queries list` prints each registered query's name, MCP exposure, and typed params. Named `validate` (not `check`) to avoid overlap with the existing `omnigraph lint` — `query check`/`query lint` are already deprecated argv-shims to `lint`. Registry entries resolve like the server: a named graph uses its per-graph `queries:`; otherwise the top-level one. - Queries subcommand group; reuses QueryRegistry::load + check from omnigraph-server; local-only (needs the schema), mirrors lint - tests: clean registry exits 0, broken query exits non-zero + names it, list shows the query and its typed params Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Route registry selection through one shared query_entries_for The "which queries: block applies for graph X" rule existed twice — the server boot path and the CLI's registry_entries — and had already drifted: the CLI carried an unreachable unwrap_or_else fallback the server lacked. Add OmnigraphConfig::query_entries_for(graph: Option<&str>) as the single definition (named graph -> its per-graph block; otherwise top-level) and route all three sites through it: server single mode, server multi-graph loop, and the CLI. The CLI's dead fallback arm is deleted; CLI and server now resolve identically by construction. No behavior change. Extends the config round-trip test to pin the selector, including the unknown-name -> top-level fallback the deleted CLI arm covered. * Funnel registry validation through one validate_and_attach gate The check -> refuse-on-breakage -> log-warnings -> empty->None block was copy-pasted across both open paths (single mode and the multi-graph per-graph open), differing only by the graph label. A third opener could attach a registry that was never schema-checked. Extract validate_and_attach(queries, catalog, label) -> Option<Arc<..>> as the single gate both paths call, so attaching an unchecked registry is no longer expressible. The catalog handle is an owned Arc, so calling it before the multi-mode policy match (which rebinds db) is borrow-clean. No behavior change. Adds a direct unit test of the helper (empty / clean / breakage incl. the graph label in the message) — covering the multi-graph path's logic, which previously had no boot-refusal coverage. * Resolve param types structurally in the MCP vector lint The exposed-query advisory detected vector params with type_name.starts_with("Vector(") — a second copy of the compiler's own ScalarType::from_str_name vector parsing that could drift from it. Key the lint off PropType::from_param_type_name + ScalarType::Vector(_) instead, the one canonical resolver the type system already uses. Any future param-suppliability lint now reads the structured type rather than scanning the surface string. Behavior-preserving: the grammar forbids list-of-vector params (list_type = "[" base_type "]", and base_type excludes Vector), so the only input where the structured and string checks could differ is unparseable. Adds a guard test that an exposed String param does not false-trigger the warning. * Refuse duplicate MCP tool names across exposed stored queries The effective MCP tool name (explicit tool_name, else the query name) is a second identity namespace beside the registry key, but nothing enforced it unique — two exposed queries could claim one catalog key, and each consumer re-derived the name ad hoc. Add StoredQuery::effective_tool_name() as the one definition, and a load-time uniqueness pass in from_specs over exposed queries: a collision is a collected LoadError naming the loser and the winner. Scoped to exposed queries (unexposed have no MCP tool); deterministic over the BTreeMap so the first-declared wins and the error order is stable. New (rare) refusal: a config with colliding exposed tool names now fails `omnigraph queries validate` offline and refuses server boot, the same posture as a malformed registry. Release-note-worthy. Test-first: duplicate_exposed_tool_name_is_a_load_error (red before the pass, green after) + a CLI offline test; the unexposed sibling pins the exposed-only scope; effective_tool_name asserts folded into the load test. * docs: document the queries registry, CLI, and invoke_query action The stored-query surface shipped without user docs. Add it, per the same-PR maintenance contract: - policy.md: invoke_query as per-graph action #10 (branch-scoped), with the double-gating note; renumber graph_list; add it to the branch_scope list. - cli-reference.md: the `queries validate | list` command, and the `queries:` config block (per-graph + top-level) with mcp.expose/tool_name and the tool-name uniqueness rule. - server.md: boot-time stored-query type-check (refuse on breakage), noting invocation over HTTP/MCP is not yet exposed. * Add POST /queries/{name} stored-query invocation handler Invoke a curated server-side stored query by name: source + name come from the per-graph queries: registry, the client sends only runtime inputs (params, branch, snapshot). Gated by the invoke_query Cedar action at the boundary; the handler delegates to the existing run_query/run_mutate, whose inner Read/Change enforce still runs — so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). - InvokeStoredQueryRequest + an untagged InvokeStoredQueryResponse { Read(ReadOutput), Change(ChangeOutput) } → one Json<_> return type and a oneOf 200 schema (a correct contract, not a wrong-but-simple one). - Route lives in per_graph_protected → single-mode /queries/{name} and multi-mode /graphs/{id}/queries/{name} for free. - Deny == unknown: an invoke_query denial and a missing query both return the same 404, so the catalog can't be probed by an unauthorized caller. - OpenAPI regenerated; tests cover read, mutation double-gate (403 vs 200), bad-param 400, and the identical-404 deny path. Completes the MR-969 V1 invocation slice (registry + /queries/{name} + invoke_query). * docs: stored-query invocation endpoint; flip the not-yet-exposed caveat Now that POST /queries/{name} ships (C7), document it: add the endpoint to server.md's inventory + an invocation section (body, untagged read/mutate envelope, invoke_query gate, double-gated mutations, deny == 404), and flip the startup note that said invocation was not yet exposed. In policy.md, replace "no invocation call site yet" on the invoke_query action with a pointer to the endpoint. * Scope the stored-query 404-hiding claim to non-invoke_query callers Review found the deny==404 catalog-hiding was overstated as a contract: it holds only at the outer invoke_query gate. A caller that HOLDS invoke_query but lacks read/change gets the inner gate's 403 for an existing query vs 404 for an unknown one — so existence is visible to grant-holders by design (the intended double-gate). The handler docstring, OpenAPI 404 description, and server.md all claimed the 404 was airtight against any denied actor. Correct the wording in all three (no behavior change) and add the missing symmetric test (invoke_query but no read -> 403 for an existing query, 404 for unknown) so the actual contract is pinned. Also document that in default-deny mode (tokens, no policy) every invocation 404s until an invoke_query rule is configured. Nits: the from_specs collision comment said "first declared wins" but it is lexicographically-first by name (BTreeMap); the effective_tool_name docstring overclaimed the CLI display routes through it (it resolves the rule on its own output DTO). * Default mcp.expose to true (the manifest entry is the opt-in) expose controls MCP-catalog membership only — it is not an authorization gate (invocation is gated by invoke_query regardless). So requiring a per-query mcp.expose: true was friction with no safety benefit: a non-exposed query is still HTTP-invocable by name. Flip the default so declaring a query in the manifest exposes it to the agent tool catalog by default; expose: false is the escape hatch for service-only queries. Both the absent-mcp path (Default impl) and the present-but-no-expose path (serde default fn) now yield true. Doc comments + cli-reference updated; the config round-trip test asserts the new default. * Add GET /queries stored-query catalog endpoint List a graph's mcp.expose stored queries as a typed tool catalog so a client (the MCP server) can register them as tools without fetching .gq source. Each entry carries name, MCP tool_name, description/instruction, a read/mutate flag, and decomposed typed params (kind enum: string|bool|int| bigint|float|date|datetime|blob|vector|list, plus item_kind for lists and vector_dim) — so the consumer builds an input schema with a closed match and never re-parses omnigraph type spelling. I64/U64 are bigint (string on the wire): a JSON number loses precision past 2^53 and the engine already accepts decimal strings. Read-gated (works in default-deny; the catalog is graph-wide, authorized against main). NOT Cedar-filtered per query yet — a reader can list a query whose invoke_query they lack (documented gap until per-query authz lands); invocation stays invoke_query-gated + deny==404. - api: QueriesCatalogOutput / QueryCatalogEntry / ParamDescriptor / ParamKind + query_catalog_entry (reuses PropType::from_param_type_name; scalar_kind is exhaustive, so a new ScalarType is a compile error here until catalogued). - GET /queries route in per_graph_protected (→ /graphs/{id}/queries in multi mode); OpenAPI regenerated; path allowlists updated. - Tests: projection unit (every kind, list, vector, nullable, mutation, empty) + handler (exposed-only filter, read-gate probe-oracle, empty registry). * docs: GET /queries stored-query catalog endpoint Document the catalog: the endpoint table row (GET /queries, read-gated), a catalog section (typed-param kind enum, bigint/date/datetime/blob-as-string, graph-wide/branch-independent, mcp.expose default true, the read-gated probe-oracle gap), and flip the startup note now that the catalog ships. * Collect file-I/O and parse errors in QueryRegistry::load in one pass load() early-returned on any unreadable .gq file, masking parse / identity / tool-name-collision errors in the OTHER (readable) files — so an operator fixed the missing file, restarted, and only then saw the next broken query. Now it collects I/O errors but still runs from_specs on the readable specs and returns the union, so every broken entry surfaces at once (matching the collected-errors contract the rest of the registry already follows). Safe: from_specs' tool-name collision check runs over loaded queries only, so dropping an I/O-failed entry can only under-report a collision, never invent one. I/O errors are ordered first (BTreeMap key order), then spec errors. Adds a load-level test (tempdir: a valid, a missing, and a parse-broken .gq) asserting all three surface in one Err — confirmed red before the fix. * Make invoke_query graph-scoped (one branch authority) invoke_query gates reaching the curated stored-query surface — a graph-level capability. Per-branch/snapshot access is already enforced by the inner read/change gate in run_query/run_mutate (authorized against the resolved branch), so branch-scoping the outer gate was redundant AND wrong for snapshot reads (it defaulted to main). Drop the branch dimension: remove InvokeQuery from uses_branch_scope (it joins admin as graph-scoped) and authorize the boundary gate with branch: None. Lossless: an actor confined to branch X by their read/change rules can still only invoke a stored query that touches X. A rule that sets branch_scope on invoke_query is now rejected by validate() — write invoke_query in its own rule. Ripple (atomic): restructure the server invoke fixture so invoke_query sits in its own branch_scope-free rule; invert invoke_query_is_branch_scoped -> invoke_query_rejects_branch_scope; the per-graph authorize test uses branch: None; docs (policy.md, server.md, the InvokeQuery doc). No wire/OpenAPI change. * Resolve graph config by identity, not server mode Which policy/queries block applies for a graph was decided three different, mode-dependent ways: single-mode boot used top-level even for a named graph; multi-mode used per-graph (and silently ignored a top-level queries block); the CLI used per-graph for a named target. So `queries validate --target prod` could check a different registry than the single-mode server loaded, and a named graph's per-graph policy/queries were silently shadowed. Make config a function of graph IDENTITY: a graph served by NAME (--target/server.graph, a graphs: entry) uses its own graphs.<name>.{policy, queries}; a bare URI is anonymous and uses top-level. One rule, applied by single-mode boot, multi-mode boot, and the CLI — so they can't diverge and the CLI predicts the server exactly. No silent ignore: serving a named graph while a top-level policy/queries block is populated now refuses boot, naming the block (the multi-mode top-level-policy bail, extended to queries and to single-mode-named). The CLI's `queries validate` derives the schema URI and the registry from ONE selection, and a positional URI forces anonymous (ignoring cli.graph) so the two can't come from different graphs. BREAKING (released behavior): single mode by name (--target/server.graph) with top-level policy/queries previously used top-level; it now uses the per-graph block and refuses boot if top-level is also populated. Bare-URI single mode is unchanged. Loud, with migration text pointing at graphs.<name>. - config: resolve_policy_file_for (policy sibling of query_entries_for, no top-level fallback) + populated_top_level_blocks for the coherence check. - characterization tests (single-mode named -> per-graph; named + top-level -> bail; multi-mode top-level queries -> bail; CLI positional-URI -> top-level). - docs: policy.md, server.md, cli-reference.md. * docs: RFC-002 credentials keyed by server name (keychain/profile/env) Reworks the RFC's credentials model: secrets are keyed by server name — OS keychain `omnigraph:<server>` (preferred) -> a `[<server>]` profile in `~/.omnigraph/credentials` -> `OMNIGRAPH_TOKEN[_<SERVER>]` env (CI), the AWS/gh/kube model. `servers.<name>` is endpoint-only by default but may carry an explicit, secret-free `auth: { token: { env|file|command|keychain } }` source. The shipped `bearer_token_env` + `.env.omni` dotenv remain a legacy compat path; no `credentials.yaml`. * docs: RFC-002 — typed graph locator (storage/server/graph_id), not a uri string Add §1.1: the resolved graph address is a typed GraphLocator (Embedded{storage} | Remote{server, graph_id}), not a flat uri: String. Diagnoses the string model's cost in the code today (~16 is_remote_uri forks, TargetConfig can't express multi-server x multi-graph, the CLI bails on remote, the ts SDK models baseUrl+graphId separately) and settles the YAML naming so the key names the locus: - storage: (embedded) — shipped uri: is a deprecated alias - server: + graph_id: (remote) — graph_id defaults to the entry key - storage xor server, reject both/neither (no silent ambiguity) Kills the graphs:/graph: collision and the uri:-might-be-a-server ambiguity. Updates the §1/§8 examples and the entry-shape notes to the new naming. * Test: queries list must reject an unknown --target queries list opens no graph URI, so unknown-graph validation does not ride along on resolve_target_uri the way it does for every other command. The new test reproduces the gap: with an unknown --target the command currently exits 0 and prints the (empty) top-level registry instead of erroring like the URI-resolving commands do. Fails against current code; the fix follows. * Validate the graph selection in queries list Graph-existence validation was a side effect of URI resolution: every URI-resolving command rejects an unknown --target via resolve_target_uri, but queries list opens no URI, so query_entries_for(Some(unknown)) silently fell back to the top-level registry and showed the wrong (or empty) catalog. Make membership a property of the selection: add the fallible resolve_graph_selection alongside the infallible query_entries_for (a known name passes through, an unknown name errors with the same message as resolve_target_uri, None stays anonymous), and validate the selection in execute_queries_list. query_entries_for is unchanged — server boot's bare-URI path still needs its None -> top-level arm. * Surface policy-engine errors from stored-query invoke The invoke handler mapped every authorize_request failure to 404 ('stored query not found'), which collapsed the authorization decision (deny -> 403) together with operational failures (no actor -> 401, Cedar evaluation error -> 500). A real policy-engine 500 was hidden as a missing query. Separate the two concerns instead of sniffing the masked status. Extract authorize() returning an Authz { Allowed, Denied(msg) } decision and reserve Err for operational failures only; authorize_request becomes a thin wrapper that maps Denied -> 403, so the 16 deny-as-403 callers are unchanged. The invoke handler now matches the decision directly: a denial stays 404 (deny == missing, so the catalog can't be probed without the grant), while a 401/500 propagates with its true status. 500 is now a reachable outcome on POST /queries/{name}; document it in the endpoint responses and regenerate openapi.json. * Extract the named-graph/top-level coherence rule into one helper The rule 'a named graph uses its own graphs.<name> block, so a populated top-level block is a config error' lived inline in single-mode server boot. Extract it to OmnigraphConfig::ensure_top_level_blocks_honored so the same definition can be shared by the CLI selection gate (next commit) and the two can't drift. Boot calls the helper; the message is reworded context-neutral (drops 'serving') so it reads correctly from both boot and the CLI. Behavior-preserving: multi-graph mode keeps its own unconditional check, and single_mode_named_graph_rejects_top_level_blocks still passes. * Test: queries validate/list must reject a named graph with a top-level block Server boot refuses a config where a graph is selected by name yet a top-level queries:/policy.file block is populated (the block would be silently ignored). The CLI's queries validate/list resolve the same named selection but skip that coherence check, so they give a false green / list the per-graph block. The new test reproduces it: validate prints OK and list succeeds where boot would refuse. Fails against current code; the fix follows. * Enforce top-level coherence in the single CLI selection gate queries validate validated graph membership only as a side effect of URI resolution and queries list only via resolve_graph_selection's membership check; neither applied the named-graph/top-level coherence rule server boot enforces, so both gave a false green on a config boot refuses. Fold ensure_top_level_blocks_honored into resolve_graph_selection so it is the single gate that returns only valid + server-coherent selections, and route resolve_selected_graph (queries validate) through it; queries list already calls the gate. A named graph with a populated top-level block now errors in both commands, matching boot. A positional URI stays anonymous (top-level honored), so queries_validate_positional_uri_ignores_default_graph is unaffected. * docs: RFC-003 — MCP server surface for omnigraph-server Detailed MCP-transport design for the stored-query/MCP work, building on the shipped #128 registry. Corrects the draft against the branch head: the coarse invoke_query gate + 404 denial-masking are already wired (server_invoke_query), so per-query invoke_query scope (PolicyRequest has no query-name dimension yet) is the real prerequisite; positions the doc as superseding rfc-001's MCP transport (/mcp/tools+/mcp/invoke) and reconciles the shipped mcp.expose YAML form and the schema-introspection non-goal; grounds the parity surface in the actual omnigraph-ts package (13 tools with read/change ids, 2 resources). * docs(config): clarify graph config boundaries * fix(config): enforce graph-scoped policies and query validation * fix(cli): require graph selection for scoped query registries * fix(server): preserve named graph id in single mode policy * fix(cli): share graph identity for policy resolution * test(cli): cover policy tooling server graph selection * fix(cli): honor server graph for policy tooling --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-01 22:50:31 +02:00
```rust
// Reuses — crates/omnigraph-server/src/lib.rs:876 (abridged)
let per_graph_protected = Router::new()
.route("/snapshot", get(server_snapshot))
// … /query /mutate /queries /queries/{name} /schema /schema/apply /load /branches /commits …
.merge(mcp::mcp_router(state.clone())) // ← ADD: brings its own tower-http body-limit layer
.route_layer(middleware::from_fn_with_state(state.clone(), resolve_graph_handle)) // inner: injects Arc<GraphHandle> (lib.rs:929)
.route_layer(middleware::from_fn_with_state(state.clone(), require_bearer_auth)); // outer: injects ResolvedActor / 401 (lib.rs:933)
let management = Router::new()
.route("/graphs", get(server_graphs_list)) // GraphList — server-scoped, REST-only
.route_layer(middleware::from_fn_with_state(state.clone(), require_bearer_auth));
// RFC-011 cluster-only: per-graph routes ALWAYS nest under /graphs/{graph_id};
// there is no flat mode and no routing match. (lib.rs:953)
let protected = Router::new()
.nest("/graphs/{graph_id}", per_graph_protected) // → POST /graphs/{id}/mcp
.merge(management);
```
Stored-query registry foundation + config/CLI RFC-002 (#128) * MR-969: add stored-query registry config surface Introduce the `queries:` block in omnigraph.yaml — an inline `name -> entry` map of stored queries, per-graph (`graphs.<id>.queries`) and top-level for single-graph mode, mirroring how `policy` is wired in both modes. Each entry points at a `.gq` file and carries optional MCP exposure settings (`expose`, `tool_name`), defaulting to not-exposed. Additive: absent `queries:` leaves current behavior unchanged. - QueryEntry { file, mcp: McpSettings { expose, tool_name } } - `queries` field on TargetConfig + OmnigraphConfig (serde default) - query_entries() / target_query_entries() accessors - resolve_query_file() — base_dir-relative `.gq` path resolution - round-trip + absent-block tests Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add stored-query registry loader and GraphHandle wiring Add a `queries` module: QueryRegistry loads each declared `.gq` entry, parses it, and selects the query whose symbol matches the manifest key, asserting the two agree (key == `query <name>` symbol). Identity is the query name; a key/symbol mismatch is a load-time error. Errors are collected, not fail-fast, so a bad registry surfaces every broken entry at once. Schema type-checking is deliberately left to a separate pass so the loader stays callable without an open engine. Thread an `Option<Arc<QueryRegistry>>` through GraphHandle alongside the per-graph policy; the URI-canonicalizing clone propagates it. Production openers default to None for now — the boot path loads and attaches the registry in a later change. - QueryRegistry::{from_specs, load, lookup, iter}; StoredQuery::is_mutation - GraphHandle.queries field, propagated on canonical clone - registry unit tests: identity match/mismatch, multi-query selection, per-entry parse errors, error collection, mutation classification Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: add RFC-002 config & CLI architecture Layered config (user-global ~/.config/omnigraph/ + per-project), a unifying `target` abstraction resolving to (locus, graph, sub-state, credential) with embedded-URI XOR remote-server loci, multi-server × multi-graph client targeting, credentials by-reference, and the file-naming decision: project and server config are one artifact (`omnigraph.yaml`); the only differently-named file is the user-global `config.yaml`, split by scope not role. Includes the 12-factor bind portability rule (prefer --bind/OMNIGRAPH_BIND over a committed server.bind) and the defined-locally / invoked-remotely model for stored queries. Derived from first principles working backwards from what the engine enables; validated against kube/Helix/git/compose. Linked from docs/dev/index.md. Proposed; phased rollout for the MR-973/974/981 family. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add check() to validate stored queries against the live schema A pure check(registry, catalog) that type-checks every stored query via the same typecheck_query_decl the engine runs for inline queries — no parallel implementation. Failures are collected, not fail-fast, so an operator sees every broken query (e.g. a type/property a migration renamed or removed) in one pass. Breakages are fatal (the boot path will refuse to start); warnings are advisory. Pure over (registry, catalog) so it is callable both at boot (engine catalog) and offline from the CLI without an open engine. Advisory lint: an mcp.expose:true query that declares a Vector(N) parameter warns — an LLM cannot supply a raw embedding vector; such a query should take a String parameter and embed server-side. Warns rather than rejects, since service-to-service callers may pass vectors. - CheckReport { breakages, warnings }; has_breakages / is_clean - tests: valid query, unknown type, unknown property, collect-not-fail-fast, vector-param-exposed warns, unexposed silent Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Drop internal plan-label refs from stored-query config comments Doc comments referenced sequencing labels ("C2") that mean nothing to a reader; reword to describe the behavior directly. Comment-only. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile aliases with the role model in RFC-002 Place the existing client-only `aliases:` block in the client/server role split: aliases are client-role (CLI, embedded, ungated) and may live in both user-global and project config; `queries:` is server-role (deployment manifest only). They overlap as "name -> .gq"; `queries:` is the superset, and the end-state subsumes aliases (definition -> queries, target/branch/format -> client invocation context, positional args -> CLI sugar). v1 keeps aliases unchanged. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: make RFC-002 config global-first, project-optional The global user config is the primary, self-sufficient default; the CLI works from any directory with no project file (the kubectl/aws/gh posture), a deliberate flip from today's project-anchored behavior. The project omnigraph.yaml becomes an optional repo-scoped override and the deployment manifest. Uniform schema, both layers optional; global can hold any section including a personal server's graphs/queries. Additive: project still overrides global; the flip adds a fallback layer below the project file rather than removing it. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: justify XDG ~/.config/omnigraph over legacy ~/.omnigraph in RFC-002 Make the rationale explicit: XDG-first because OmniGraph is a client that will cache remote catalogs and keep session state alongside secrets, and XDG separates config / cache / state into distinct dirs (clear cache without touching creds; backups skip cache) whereas a single ~/.omnigraph/ mixes them. Honor ~/.omnigraph/ as a fallback for the peer-group (aws/kube/docker/helix) expectation. Add XDG_CACHE_HOME / XDG_STATE_HOME to the override precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: build RFC-002 credentials on the existing env-file mechanism OmniGraph already has credentials-by-reference: bearer_token_env names the env var, and auth.env_file is a git-ignored dotenv the CLI auto-loads (real env vars win), resolved via resolve_remote_bearer_token. The RFC's proposed credentials.yaml + token_env were redundant parallel inventions. Reconcile: reuse bearer_token_env (extend to servers.<name>) and auth.env_file (add a global ~/.config/omnigraph/.env layered under the project .env.omni); OS keychain is an additive future resolver. No new credentials.yaml. Updated summary, non-goals, background, file-naming, credentials, example, login, migration, rollout. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: use single ~/.omnigraph dir (Helix-style), not XDG, in RFC-002 Reverse the earlier XDG-first call. The prior argument rested on a false dichotomy (single-dir => mixed config/cache/state); in fact the peer tools (aws, kube, helix) achieve separation via SUBDIRECTORIES inside one ~/.tool/ dir (~/.aws/sso/cache/, ~/.kube/cache/), getting cache hygiene AND one discoverable place. So everything goes under ~/.omnigraph/: config.yaml, credentials (dotenv, 0600), cache/, state/. Lower cognitive load, matches what DB/cloud-CLI users expect, matches Helix. OMNIGRAPH_HOME overrides; $XDG_CONFIG_HOME optionally honored but ~/.omnigraph/ is canonical. Updated all paths, the rationale paragraph, the file-naming table (added a cache/state row), and env precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile RFC-002 with shipped/planned CLI tickets Align with reality found in existing tickets: - Noun is graph/graphs, not target/targets (MR-603 done renamed the config key targets->graphs, flag --graph). Use graphs:/--graph; an entry is embedded (uri) XOR remote (server + remote graph name). - ~/.omnigraph/ confirmed by MR-581 (og template pull, done) which already quick-starts templates there. - Templates already exist (MR-581/MR-531) — not invented here. - The init family is already specced (init, quickstart MR-973, serve MR-970, prune MR-972, mcp install MR-974, agent-mode MR-981); this RFC only adds the user route (~/.omnigraph/config.yaml + login). - aliases: -> operations: planned (MR-839). - bearer_token_env gap tracked in MR-971. - query lint/check already exist (MR-639) — registry validator must not collide with the singular `query check`. Add a Reconciliation section; fix the canonical example to graphs:/--graph. Also: merge semantics refined (deep-merge settings, replace named entries, replace lists, config view --resolved --show-origin). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: correct stale-ticket claims and fold init/bootstrap design into RFC-002 Verify against code, not ticket statuses (MR-581 is marked done but is stale/unbuilt): no ~/.omnigraph usage, no template/serve/quickstart/ prune/login commands exist; config still uses aliases: (no operations:). So ~/.omnigraph/ stands on peer-convention merits alone, and templates are a design question, not a foothold. Add §7.5: the three-tier init model (user route = login + ~/.omnigraph/config.yaml; thin project init; fat quickstart + templates) with first-principles positions (split init/login, in-place refuse-if-exists, interactive vs --auto/agent-mode, --template flag, secrets-on-scaffold gitignore rule). This RFC owns only the user route; the rest are sibling tickets (MR-973/970/972/974/981). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: breadboard + slice Shape A in RFC-002 Add the implementation breadboard (places P1-P5, affordances N1-N14 with NEW markers, mermaid) and five vertical slices for the selected config/ CLI/init shape: V1 global layer + merge engine + config view; V2 remote graphs + HTTP-client path + credential resolution; V3 omnigraph login; V4 init-hardening + quickstart + templates (rides MR-970); V5 agent-mode (MR-981). Rollout reordered to the slice sequence; spikes X1-X4 gate their owning slice. V1-V2 close the substantive client->server gap. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add InvokeQuery Cedar action (coarse, graph-scoped) A per-graph, branch-scoped action that gates invoking a server-side stored query by name. Coarse for now: an `invoke_query` allow rule permits any stored query on the graph; a future, additive refinement adds an optional per-query-name scope without changing rules written against the coarse action. Enforcement is at the HTTP boundary; the engine `_as` writers still enforce read/change per the query body, so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). No call site yet — the invocation handler wires it in a later change (same pattern as Admin/GraphList added ahead of consumers). - variant + as_str/resource_kind(Graph)/FromStr/uses_branch_scope - Cedar schema: invoke_query appliesTo Graph - tests: per-graph allow/deny, branch-scope accepted Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Load and type-check stored queries at server boot, refusing breakage At startup the server now loads each graph's stored-query registry, type-checks every query against that graph's live schema, and refuses to boot if any query references a type/property the schema doesn't have (same posture as bad policy YAML) — so schema drift surfaces at the deploy boundary, not silently at invocation. Non-blocking warnings are logged. The validated registry is attached to the GraphHandle (the two production sites previously held `queries: None`). Loading (parse + key==symbol identity) happens at settings-build time where the config is in scope; the schema type-check happens after each engine opens (single mode in `open_single_with_queries`, multi mode in `open_single_graph`). `open_with_bearer_tokens_and_policy` delegates with an empty registry so its 18 test callers are unchanged; the public `new_*` constructors are unchanged (only the private build path threads the registry). - ServerConfigMode::Single / GraphStartupConfig carry the loaded registry - boot tests: valid registry boots; type-broken query refuses boot + names it Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add `omnigraph queries validate` and `queries list` CLI `queries validate` type-checks the stored-query registry against the live schema offline — it opens the selected graph, runs the same check() the server runs at boot, prints breakages/warnings (human or --json), and exits non-zero on any breakage — so an operator can catch a query broken by a schema change without restarting the server. `queries list` prints each registered query's name, MCP exposure, and typed params. Named `validate` (not `check`) to avoid overlap with the existing `omnigraph lint` — `query check`/`query lint` are already deprecated argv-shims to `lint`. Registry entries resolve like the server: a named graph uses its per-graph `queries:`; otherwise the top-level one. - Queries subcommand group; reuses QueryRegistry::load + check from omnigraph-server; local-only (needs the schema), mirrors lint - tests: clean registry exits 0, broken query exits non-zero + names it, list shows the query and its typed params Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Route registry selection through one shared query_entries_for The "which queries: block applies for graph X" rule existed twice — the server boot path and the CLI's registry_entries — and had already drifted: the CLI carried an unreachable unwrap_or_else fallback the server lacked. Add OmnigraphConfig::query_entries_for(graph: Option<&str>) as the single definition (named graph -> its per-graph block; otherwise top-level) and route all three sites through it: server single mode, server multi-graph loop, and the CLI. The CLI's dead fallback arm is deleted; CLI and server now resolve identically by construction. No behavior change. Extends the config round-trip test to pin the selector, including the unknown-name -> top-level fallback the deleted CLI arm covered. * Funnel registry validation through one validate_and_attach gate The check -> refuse-on-breakage -> log-warnings -> empty->None block was copy-pasted across both open paths (single mode and the multi-graph per-graph open), differing only by the graph label. A third opener could attach a registry that was never schema-checked. Extract validate_and_attach(queries, catalog, label) -> Option<Arc<..>> as the single gate both paths call, so attaching an unchecked registry is no longer expressible. The catalog handle is an owned Arc, so calling it before the multi-mode policy match (which rebinds db) is borrow-clean. No behavior change. Adds a direct unit test of the helper (empty / clean / breakage incl. the graph label in the message) — covering the multi-graph path's logic, which previously had no boot-refusal coverage. * Resolve param types structurally in the MCP vector lint The exposed-query advisory detected vector params with type_name.starts_with("Vector(") — a second copy of the compiler's own ScalarType::from_str_name vector parsing that could drift from it. Key the lint off PropType::from_param_type_name + ScalarType::Vector(_) instead, the one canonical resolver the type system already uses. Any future param-suppliability lint now reads the structured type rather than scanning the surface string. Behavior-preserving: the grammar forbids list-of-vector params (list_type = "[" base_type "]", and base_type excludes Vector), so the only input where the structured and string checks could differ is unparseable. Adds a guard test that an exposed String param does not false-trigger the warning. * Refuse duplicate MCP tool names across exposed stored queries The effective MCP tool name (explicit tool_name, else the query name) is a second identity namespace beside the registry key, but nothing enforced it unique — two exposed queries could claim one catalog key, and each consumer re-derived the name ad hoc. Add StoredQuery::effective_tool_name() as the one definition, and a load-time uniqueness pass in from_specs over exposed queries: a collision is a collected LoadError naming the loser and the winner. Scoped to exposed queries (unexposed have no MCP tool); deterministic over the BTreeMap so the first-declared wins and the error order is stable. New (rare) refusal: a config with colliding exposed tool names now fails `omnigraph queries validate` offline and refuses server boot, the same posture as a malformed registry. Release-note-worthy. Test-first: duplicate_exposed_tool_name_is_a_load_error (red before the pass, green after) + a CLI offline test; the unexposed sibling pins the exposed-only scope; effective_tool_name asserts folded into the load test. * docs: document the queries registry, CLI, and invoke_query action The stored-query surface shipped without user docs. Add it, per the same-PR maintenance contract: - policy.md: invoke_query as per-graph action #10 (branch-scoped), with the double-gating note; renumber graph_list; add it to the branch_scope list. - cli-reference.md: the `queries validate | list` command, and the `queries:` config block (per-graph + top-level) with mcp.expose/tool_name and the tool-name uniqueness rule. - server.md: boot-time stored-query type-check (refuse on breakage), noting invocation over HTTP/MCP is not yet exposed. * Add POST /queries/{name} stored-query invocation handler Invoke a curated server-side stored query by name: source + name come from the per-graph queries: registry, the client sends only runtime inputs (params, branch, snapshot). Gated by the invoke_query Cedar action at the boundary; the handler delegates to the existing run_query/run_mutate, whose inner Read/Change enforce still runs — so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). - InvokeStoredQueryRequest + an untagged InvokeStoredQueryResponse { Read(ReadOutput), Change(ChangeOutput) } → one Json<_> return type and a oneOf 200 schema (a correct contract, not a wrong-but-simple one). - Route lives in per_graph_protected → single-mode /queries/{name} and multi-mode /graphs/{id}/queries/{name} for free. - Deny == unknown: an invoke_query denial and a missing query both return the same 404, so the catalog can't be probed by an unauthorized caller. - OpenAPI regenerated; tests cover read, mutation double-gate (403 vs 200), bad-param 400, and the identical-404 deny path. Completes the MR-969 V1 invocation slice (registry + /queries/{name} + invoke_query). * docs: stored-query invocation endpoint; flip the not-yet-exposed caveat Now that POST /queries/{name} ships (C7), document it: add the endpoint to server.md's inventory + an invocation section (body, untagged read/mutate envelope, invoke_query gate, double-gated mutations, deny == 404), and flip the startup note that said invocation was not yet exposed. In policy.md, replace "no invocation call site yet" on the invoke_query action with a pointer to the endpoint. * Scope the stored-query 404-hiding claim to non-invoke_query callers Review found the deny==404 catalog-hiding was overstated as a contract: it holds only at the outer invoke_query gate. A caller that HOLDS invoke_query but lacks read/change gets the inner gate's 403 for an existing query vs 404 for an unknown one — so existence is visible to grant-holders by design (the intended double-gate). The handler docstring, OpenAPI 404 description, and server.md all claimed the 404 was airtight against any denied actor. Correct the wording in all three (no behavior change) and add the missing symmetric test (invoke_query but no read -> 403 for an existing query, 404 for unknown) so the actual contract is pinned. Also document that in default-deny mode (tokens, no policy) every invocation 404s until an invoke_query rule is configured. Nits: the from_specs collision comment said "first declared wins" but it is lexicographically-first by name (BTreeMap); the effective_tool_name docstring overclaimed the CLI display routes through it (it resolves the rule on its own output DTO). * Default mcp.expose to true (the manifest entry is the opt-in) expose controls MCP-catalog membership only — it is not an authorization gate (invocation is gated by invoke_query regardless). So requiring a per-query mcp.expose: true was friction with no safety benefit: a non-exposed query is still HTTP-invocable by name. Flip the default so declaring a query in the manifest exposes it to the agent tool catalog by default; expose: false is the escape hatch for service-only queries. Both the absent-mcp path (Default impl) and the present-but-no-expose path (serde default fn) now yield true. Doc comments + cli-reference updated; the config round-trip test asserts the new default. * Add GET /queries stored-query catalog endpoint List a graph's mcp.expose stored queries as a typed tool catalog so a client (the MCP server) can register them as tools without fetching .gq source. Each entry carries name, MCP tool_name, description/instruction, a read/mutate flag, and decomposed typed params (kind enum: string|bool|int| bigint|float|date|datetime|blob|vector|list, plus item_kind for lists and vector_dim) — so the consumer builds an input schema with a closed match and never re-parses omnigraph type spelling. I64/U64 are bigint (string on the wire): a JSON number loses precision past 2^53 and the engine already accepts decimal strings. Read-gated (works in default-deny; the catalog is graph-wide, authorized against main). NOT Cedar-filtered per query yet — a reader can list a query whose invoke_query they lack (documented gap until per-query authz lands); invocation stays invoke_query-gated + deny==404. - api: QueriesCatalogOutput / QueryCatalogEntry / ParamDescriptor / ParamKind + query_catalog_entry (reuses PropType::from_param_type_name; scalar_kind is exhaustive, so a new ScalarType is a compile error here until catalogued). - GET /queries route in per_graph_protected (→ /graphs/{id}/queries in multi mode); OpenAPI regenerated; path allowlists updated. - Tests: projection unit (every kind, list, vector, nullable, mutation, empty) + handler (exposed-only filter, read-gate probe-oracle, empty registry). * docs: GET /queries stored-query catalog endpoint Document the catalog: the endpoint table row (GET /queries, read-gated), a catalog section (typed-param kind enum, bigint/date/datetime/blob-as-string, graph-wide/branch-independent, mcp.expose default true, the read-gated probe-oracle gap), and flip the startup note now that the catalog ships. * Collect file-I/O and parse errors in QueryRegistry::load in one pass load() early-returned on any unreadable .gq file, masking parse / identity / tool-name-collision errors in the OTHER (readable) files — so an operator fixed the missing file, restarted, and only then saw the next broken query. Now it collects I/O errors but still runs from_specs on the readable specs and returns the union, so every broken entry surfaces at once (matching the collected-errors contract the rest of the registry already follows). Safe: from_specs' tool-name collision check runs over loaded queries only, so dropping an I/O-failed entry can only under-report a collision, never invent one. I/O errors are ordered first (BTreeMap key order), then spec errors. Adds a load-level test (tempdir: a valid, a missing, and a parse-broken .gq) asserting all three surface in one Err — confirmed red before the fix. * Make invoke_query graph-scoped (one branch authority) invoke_query gates reaching the curated stored-query surface — a graph-level capability. Per-branch/snapshot access is already enforced by the inner read/change gate in run_query/run_mutate (authorized against the resolved branch), so branch-scoping the outer gate was redundant AND wrong for snapshot reads (it defaulted to main). Drop the branch dimension: remove InvokeQuery from uses_branch_scope (it joins admin as graph-scoped) and authorize the boundary gate with branch: None. Lossless: an actor confined to branch X by their read/change rules can still only invoke a stored query that touches X. A rule that sets branch_scope on invoke_query is now rejected by validate() — write invoke_query in its own rule. Ripple (atomic): restructure the server invoke fixture so invoke_query sits in its own branch_scope-free rule; invert invoke_query_is_branch_scoped -> invoke_query_rejects_branch_scope; the per-graph authorize test uses branch: None; docs (policy.md, server.md, the InvokeQuery doc). No wire/OpenAPI change. * Resolve graph config by identity, not server mode Which policy/queries block applies for a graph was decided three different, mode-dependent ways: single-mode boot used top-level even for a named graph; multi-mode used per-graph (and silently ignored a top-level queries block); the CLI used per-graph for a named target. So `queries validate --target prod` could check a different registry than the single-mode server loaded, and a named graph's per-graph policy/queries were silently shadowed. Make config a function of graph IDENTITY: a graph served by NAME (--target/server.graph, a graphs: entry) uses its own graphs.<name>.{policy, queries}; a bare URI is anonymous and uses top-level. One rule, applied by single-mode boot, multi-mode boot, and the CLI — so they can't diverge and the CLI predicts the server exactly. No silent ignore: serving a named graph while a top-level policy/queries block is populated now refuses boot, naming the block (the multi-mode top-level-policy bail, extended to queries and to single-mode-named). The CLI's `queries validate` derives the schema URI and the registry from ONE selection, and a positional URI forces anonymous (ignoring cli.graph) so the two can't come from different graphs. BREAKING (released behavior): single mode by name (--target/server.graph) with top-level policy/queries previously used top-level; it now uses the per-graph block and refuses boot if top-level is also populated. Bare-URI single mode is unchanged. Loud, with migration text pointing at graphs.<name>. - config: resolve_policy_file_for (policy sibling of query_entries_for, no top-level fallback) + populated_top_level_blocks for the coherence check. - characterization tests (single-mode named -> per-graph; named + top-level -> bail; multi-mode top-level queries -> bail; CLI positional-URI -> top-level). - docs: policy.md, server.md, cli-reference.md. * docs: RFC-002 credentials keyed by server name (keychain/profile/env) Reworks the RFC's credentials model: secrets are keyed by server name — OS keychain `omnigraph:<server>` (preferred) -> a `[<server>]` profile in `~/.omnigraph/credentials` -> `OMNIGRAPH_TOKEN[_<SERVER>]` env (CI), the AWS/gh/kube model. `servers.<name>` is endpoint-only by default but may carry an explicit, secret-free `auth: { token: { env|file|command|keychain } }` source. The shipped `bearer_token_env` + `.env.omni` dotenv remain a legacy compat path; no `credentials.yaml`. * docs: RFC-002 — typed graph locator (storage/server/graph_id), not a uri string Add §1.1: the resolved graph address is a typed GraphLocator (Embedded{storage} | Remote{server, graph_id}), not a flat uri: String. Diagnoses the string model's cost in the code today (~16 is_remote_uri forks, TargetConfig can't express multi-server x multi-graph, the CLI bails on remote, the ts SDK models baseUrl+graphId separately) and settles the YAML naming so the key names the locus: - storage: (embedded) — shipped uri: is a deprecated alias - server: + graph_id: (remote) — graph_id defaults to the entry key - storage xor server, reject both/neither (no silent ambiguity) Kills the graphs:/graph: collision and the uri:-might-be-a-server ambiguity. Updates the §1/§8 examples and the entry-shape notes to the new naming. * Test: queries list must reject an unknown --target queries list opens no graph URI, so unknown-graph validation does not ride along on resolve_target_uri the way it does for every other command. The new test reproduces the gap: with an unknown --target the command currently exits 0 and prints the (empty) top-level registry instead of erroring like the URI-resolving commands do. Fails against current code; the fix follows. * Validate the graph selection in queries list Graph-existence validation was a side effect of URI resolution: every URI-resolving command rejects an unknown --target via resolve_target_uri, but queries list opens no URI, so query_entries_for(Some(unknown)) silently fell back to the top-level registry and showed the wrong (or empty) catalog. Make membership a property of the selection: add the fallible resolve_graph_selection alongside the infallible query_entries_for (a known name passes through, an unknown name errors with the same message as resolve_target_uri, None stays anonymous), and validate the selection in execute_queries_list. query_entries_for is unchanged — server boot's bare-URI path still needs its None -> top-level arm. * Surface policy-engine errors from stored-query invoke The invoke handler mapped every authorize_request failure to 404 ('stored query not found'), which collapsed the authorization decision (deny -> 403) together with operational failures (no actor -> 401, Cedar evaluation error -> 500). A real policy-engine 500 was hidden as a missing query. Separate the two concerns instead of sniffing the masked status. Extract authorize() returning an Authz { Allowed, Denied(msg) } decision and reserve Err for operational failures only; authorize_request becomes a thin wrapper that maps Denied -> 403, so the 16 deny-as-403 callers are unchanged. The invoke handler now matches the decision directly: a denial stays 404 (deny == missing, so the catalog can't be probed without the grant), while a 401/500 propagates with its true status. 500 is now a reachable outcome on POST /queries/{name}; document it in the endpoint responses and regenerate openapi.json. * Extract the named-graph/top-level coherence rule into one helper The rule 'a named graph uses its own graphs.<name> block, so a populated top-level block is a config error' lived inline in single-mode server boot. Extract it to OmnigraphConfig::ensure_top_level_blocks_honored so the same definition can be shared by the CLI selection gate (next commit) and the two can't drift. Boot calls the helper; the message is reworded context-neutral (drops 'serving') so it reads correctly from both boot and the CLI. Behavior-preserving: multi-graph mode keeps its own unconditional check, and single_mode_named_graph_rejects_top_level_blocks still passes. * Test: queries validate/list must reject a named graph with a top-level block Server boot refuses a config where a graph is selected by name yet a top-level queries:/policy.file block is populated (the block would be silently ignored). The CLI's queries validate/list resolve the same named selection but skip that coherence check, so they give a false green / list the per-graph block. The new test reproduces it: validate prints OK and list succeeds where boot would refuse. Fails against current code; the fix follows. * Enforce top-level coherence in the single CLI selection gate queries validate validated graph membership only as a side effect of URI resolution and queries list only via resolve_graph_selection's membership check; neither applied the named-graph/top-level coherence rule server boot enforces, so both gave a false green on a config boot refuses. Fold ensure_top_level_blocks_honored into resolve_graph_selection so it is the single gate that returns only valid + server-coherent selections, and route resolve_selected_graph (queries validate) through it; queries list already calls the gate. A named graph with a populated top-level block now errors in both commands, matching boot. A positional URI stays anonymous (top-level honored), so queries_validate_positional_uri_ignores_default_graph is unaffected. * docs: RFC-003 — MCP server surface for omnigraph-server Detailed MCP-transport design for the stored-query/MCP work, building on the shipped #128 registry. Corrects the draft against the branch head: the coarse invoke_query gate + 404 denial-masking are already wired (server_invoke_query), so per-query invoke_query scope (PolicyRequest has no query-name dimension yet) is the real prerequisite; positions the doc as superseding rfc-001's MCP transport (/mcp/tools+/mcp/invoke) and reconciles the shipped mcp.expose YAML form and the schema-introspection non-goal; grounds the parity surface in the actual omnigraph-ts package (13 tools with read/change ids, 2 resources). * docs(config): clarify graph config boundaries * fix(config): enforce graph-scoped policies and query validation * fix(cli): require graph selection for scoped query registries * fix(server): preserve named graph id in single mode policy * fix(cli): share graph identity for policy resolution * test(cli): cover policy tooling server graph selection * fix(cli): honor server graph for policy tooling --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
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`mcp::mcp_router(state)` is the server's thin wrapper:
`omnigraph_mcp::mcp_router(OmnigraphMcpBackend::new(state), INGEST_REQUEST_BODY_LIMIT_BYTES /* lib.rs:148, 32 MiB */, host_policy_from_bind(…))`.
Merging the router (rather than `.route("/mcp", …)`) keeps the `/mcp`-specific body
limit from leaking onto the other routes.
**No server-scoped MCP.** Every MCP tool/resource is graph-scoped. `tools/list` can't
carry a graph id, so a single flat `/mcp` taking `graph_id` per call couldn't list
per-graph stored-query tools and would break isolation — hence per-graph routing. A
future server-level flat `/mcp` (bearer-only, no handle, server-scoped tools only)
would live in the `management` group, but is not built speculatively.
### 15.1 Multi-graph model
omnigraph's MCP is **per-graph**: one isolated MCP server per graph, with the graph
identity in the **URL path**, never in tool arguments or output. The server is
cluster-only (RFC-011), so the router **always** nests the whole protected group under
`/graphs/{graph_id}` (`lib.rs:954`) — this per-graph model is now the only model, not a
multi-mode special case. Each `/graphs/{id}/mcp` endpoint's `initialize` / `tools/list`
/ `tools/call` / `resources/*` operate only on that graph and can never list or touch
another graph's tools.
- **Discovery is REST-only, not an MCP tool.** `graphs_list` / `omnigraph://graphs`
are deliberately absent from MCP. Which graphs exist is answered by `GET /graphs`
(multi-mode only) → `GraphListResponse { graphs: [{ graph_id, uri }] }`
(`api.rs:703`), gated by the server-scoped `GraphList` Cedar action and
**default-denied without a server policy** (the registry — graph ids + storage URIs
— is never leaked until an operator authorizes it). An operator discovers graphs via
REST, then points each MCP client connection at the relevant `/graphs/{id}/mcp`; no
single MCP connection ever sees the full graph list.
- **Clients configure one connection per graph.** Tool ids are identical across graphs
(each is its own server), so the **connection name is the namespace**: a client that
auto-prefixes yields `og-sales_graph_query` vs `og-hr_graph_query`.
```bash
claude mcp add og-sales --transport http https://host/graphs/sales/mcp --header "Authorization: Bearer …"
claude mcp add og-hr --transport http https://host/graphs/hr/mcp --header "Authorization: Bearer …"
```
- **Stored queries are per-graph state.** Each graph owns its registry
(`GraphHandle.queries`, `registry.rs:55`), loaded from that graph's declaration
(`cluster.yaml graphs.<id>.queries`). So a query is exposed only on its own graph's
endpoint; the same query *name* may exist on multiple graphs with different
definitions (no cross-graph collision — different servers). `effective_tool_name()`
uniqueness is enforced **per graph** at registry load (`duplicate_tool_name`), not
across graphs. The projection mode (`per_query` vs `meta`, §9.2) is chosen from
*that graph's* exposed-query count, so a small graph can show one typed tool per
query while a large graph on the same server uses the `stored_query_list` +
`stored_query_run` meta pair. `InvokeQuery` is evaluated against *that graph's*
`handle.policy`, so an actor can be allowed stored queries on one graph and denied
on another, independently. The per-graph catalog is also discoverable over REST at
`GET /graphs/{id}/queries`.
So `tools/list` on `/graphs/sales/mcp` returns sales' built-ins + sales' stored
queries; the same call on `/graphs/hr/mcp` returns hr's — two disjoint catalogs, each
Cedar-filtered to the actor.
## 16. Tests & verification
MCP tests land in a new `crates/omnigraph-server/tests/mcp.rs` suite (black-box over
`build_app`); stored-query *projection* tests extend `stored_queries.rs`.
- **Protocol:** `initialize` + advertised `{tools, resources}` caps; `tools/list`
docs(rfc-003): fold external review into correct-by-design fixes An external review pass raised 8 findings; verified 7 valid (2 confirmed against the engine coercer). Folded them in as class-closing fixes rather than point patches: - §9.1 (③④, the headline): the JSON-Schema generator was a second hand-written copy of the engine's input contract — Blob (base64 vs URI string) and nullable (explicit null) were two drifts of one class. Move the projection to a single param_json_schema in omnigraph-api-types (next to ParamKind/ParamDescriptor), fix Blob -> {"type":"string","format":"uri"} (query_input.rs:449 / api-types:354 say blob-URI string) and nullable -> anyOf[..,null] (query_input.rs:273,296), and lock it to json_value_to_literal_typed with a schema/engine equivalence test so any future drift is a CI failure. - §7/§4 (①): replace the fail-open "empty allowed_origins => skip" with a total OriginPolicy and a single McpHostPolicy::from_bind constructor (remote default DenyBrowsers, enforced by origin_guard independent of rmcp's empty-list quirk). No absent-=>-skip state can be constructed. - §6/§12/§16 (②): make the non-paginated list seam a stated contract (Vec<T>, no nextCursor; meta mode bounds large catalogs) and drop the pagination claims the signature couldn't express. - §9.3 (⑦): built-in/stored tool-name collision becomes a cluster validate/boot error (fold built-in names into the registry uniqueness check), not a silent skip — per the invariants deny-list. - §9.2 (⑥): stored_query_mode folded into the one per-graph mcp: block (Phase 6), not a floating key; not configurable until that surface exists. - §10/§1 (⑧): scope derives from the per-graph mount; server-scoped `health` becomes graph-scoped `graph_health` (server liveness stays REST /healthz). - §13 (⑤, doc-only): OpenAI row corrected to the `authorization` field; Phase-1 reachability via static bearer is unchanged. §17 records the locked decisions; the validation header notes the review pass.
2026-06-16 17:34:00 +02:00
returns the full bounded set with **no `nextCursor`** (the non-paginated contract,
§6); `tools/call` happy path; `GET /mcp → 405`; `MCP-Protocol-Version` 400/default;
unknown/denied tool → identical `-32602`.
- **Origin (fail-closed, ①):** remote bind, no configured origins → a present
`Origin` is `403` (`DenyBrowsers`); **absent** `Origin``200` (non-browser clients);
a configured-allowed `Origin``200`; a present non-allowed `Origin` under
`OriginPolicy::Allow``403`. Asserts `origin_guard`, not rmcp's empty-list path.
- **Cedar:** a read-only actor sees read tools but not writers; a denied call masks
byte-identically to an unknown one; stored queries appear only with `invoke_query`;
the double-gate (an `invoke_query`-only actor sees a stored tool but the call
surfaces `isError` when the inner `Read` denies).
- **Dispatch:** a `graph_mutate` writes end-to-end (proves the actor/handle extension
passthrough); a malformed query → `isError:true`, not a protocol error; `graph_load`
with a missing branch and no `from``isError` (404), with `from` → forks.
docs(rfc-003): fold external review into correct-by-design fixes An external review pass raised 8 findings; verified 7 valid (2 confirmed against the engine coercer). Folded them in as class-closing fixes rather than point patches: - §9.1 (③④, the headline): the JSON-Schema generator was a second hand-written copy of the engine's input contract — Blob (base64 vs URI string) and nullable (explicit null) were two drifts of one class. Move the projection to a single param_json_schema in omnigraph-api-types (next to ParamKind/ParamDescriptor), fix Blob -> {"type":"string","format":"uri"} (query_input.rs:449 / api-types:354 say blob-URI string) and nullable -> anyOf[..,null] (query_input.rs:273,296), and lock it to json_value_to_literal_typed with a schema/engine equivalence test so any future drift is a CI failure. - §7/§4 (①): replace the fail-open "empty allowed_origins => skip" with a total OriginPolicy and a single McpHostPolicy::from_bind constructor (remote default DenyBrowsers, enforced by origin_guard independent of rmcp's empty-list quirk). No absent-=>-skip state can be constructed. - §6/§12/§16 (②): make the non-paginated list seam a stated contract (Vec<T>, no nextCursor; meta mode bounds large catalogs) and drop the pagination claims the signature couldn't express. - §9.3 (⑦): built-in/stored tool-name collision becomes a cluster validate/boot error (fold built-in names into the registry uniqueness check), not a silent skip — per the invariants deny-list. - §9.2 (⑥): stored_query_mode folded into the one per-graph mcp: block (Phase 6), not a floating key; not configurable until that surface exists. - §10/§1 (⑧): scope derives from the per-graph mount; server-scoped `health` becomes graph-scoped `graph_health` (server liveness stays REST /healthz). - §13 (⑤, doc-only): OpenAI row corrected to the `authorization` field; Phase-1 reachability via static bearer is unchanged. §17 records the locked decisions; the validation header notes the review pass.
2026-06-16 17:34:00 +02:00
- **Schema/engine equivalence (the by-design lock, ③④):** the corpus test in the
compiler crate asserting `param_json_schema` accepts *exactly* what
`json_value_to_literal_typed` accepts, per `ParamKind` — incl. **Blob as a URI string
(a base64 blob validates only as a plain string, never decoded)**, **explicit `null`
for a nullable param vs rejection for a non-nullable one**, list items, and `vector`
**with and without `vector_dim`** (absent-dim omits `minItems`/`maxItems`). A drifted
arm turns this red.
- **Tool-name collision (⑦):** a stored query whose `effective_tool_name()` equals a
built-in fails `cluster validate`/boot with a loud error — it is never silently
skipped or served.
- **Structured output:** `outputSchema` present and `structuredContent` validates
against it; the text mirror is present; never emits `structuredContent: null`.
- **Projection modes:** `per_query` below the threshold, `meta` at/above it, with the
switch logged.
- **Auth decoupling:** `/mcp` `401`s without a bearer (before rmcp) and `200`s with
one; green under the static-hash verifier and a mock OIDC `ResolvedActor`.
- **Crate-level:** `omnigraph-mcp/tests/` with a trivial `McpBackend` proving the
crate stands alone (`initialize` + `GET → 405`), plus an **rmcp surface guard**
pinning `StreamableHttpServerConfig`'s `with_*` setters, `NeverSessionManager`, the
`ServerHandler` method shapes, and the `RequestContext.extensions →
http::request::Parts` passthrough — the smoke check on any rmcp bump.
Verification commands:
```bash
cargo build --workspace --locked
cargo tree -p omnigraph-server -e normal | grep rmcp # rmcp only transitively under omnigraph-mcp
cargo test -p omnigraph-server --test mcp
cargo test -p omnigraph-server --test stored_queries
cargo test -p omnigraph-server --test openapi # /mcp carries no #[utoipa::path]; no REST drift
```
Stored-query registry foundation + config/CLI RFC-002 (#128) * MR-969: add stored-query registry config surface Introduce the `queries:` block in omnigraph.yaml — an inline `name -> entry` map of stored queries, per-graph (`graphs.<id>.queries`) and top-level for single-graph mode, mirroring how `policy` is wired in both modes. Each entry points at a `.gq` file and carries optional MCP exposure settings (`expose`, `tool_name`), defaulting to not-exposed. Additive: absent `queries:` leaves current behavior unchanged. - QueryEntry { file, mcp: McpSettings { expose, tool_name } } - `queries` field on TargetConfig + OmnigraphConfig (serde default) - query_entries() / target_query_entries() accessors - resolve_query_file() — base_dir-relative `.gq` path resolution - round-trip + absent-block tests Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add stored-query registry loader and GraphHandle wiring Add a `queries` module: QueryRegistry loads each declared `.gq` entry, parses it, and selects the query whose symbol matches the manifest key, asserting the two agree (key == `query <name>` symbol). Identity is the query name; a key/symbol mismatch is a load-time error. Errors are collected, not fail-fast, so a bad registry surfaces every broken entry at once. Schema type-checking is deliberately left to a separate pass so the loader stays callable without an open engine. Thread an `Option<Arc<QueryRegistry>>` through GraphHandle alongside the per-graph policy; the URI-canonicalizing clone propagates it. Production openers default to None for now — the boot path loads and attaches the registry in a later change. - QueryRegistry::{from_specs, load, lookup, iter}; StoredQuery::is_mutation - GraphHandle.queries field, propagated on canonical clone - registry unit tests: identity match/mismatch, multi-query selection, per-entry parse errors, error collection, mutation classification Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: add RFC-002 config & CLI architecture Layered config (user-global ~/.config/omnigraph/ + per-project), a unifying `target` abstraction resolving to (locus, graph, sub-state, credential) with embedded-URI XOR remote-server loci, multi-server × multi-graph client targeting, credentials by-reference, and the file-naming decision: project and server config are one artifact (`omnigraph.yaml`); the only differently-named file is the user-global `config.yaml`, split by scope not role. Includes the 12-factor bind portability rule (prefer --bind/OMNIGRAPH_BIND over a committed server.bind) and the defined-locally / invoked-remotely model for stored queries. Derived from first principles working backwards from what the engine enables; validated against kube/Helix/git/compose. Linked from docs/dev/index.md. Proposed; phased rollout for the MR-973/974/981 family. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add check() to validate stored queries against the live schema A pure check(registry, catalog) that type-checks every stored query via the same typecheck_query_decl the engine runs for inline queries — no parallel implementation. Failures are collected, not fail-fast, so an operator sees every broken query (e.g. a type/property a migration renamed or removed) in one pass. Breakages are fatal (the boot path will refuse to start); warnings are advisory. Pure over (registry, catalog) so it is callable both at boot (engine catalog) and offline from the CLI without an open engine. Advisory lint: an mcp.expose:true query that declares a Vector(N) parameter warns — an LLM cannot supply a raw embedding vector; such a query should take a String parameter and embed server-side. Warns rather than rejects, since service-to-service callers may pass vectors. - CheckReport { breakages, warnings }; has_breakages / is_clean - tests: valid query, unknown type, unknown property, collect-not-fail-fast, vector-param-exposed warns, unexposed silent Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Drop internal plan-label refs from stored-query config comments Doc comments referenced sequencing labels ("C2") that mean nothing to a reader; reword to describe the behavior directly. Comment-only. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile aliases with the role model in RFC-002 Place the existing client-only `aliases:` block in the client/server role split: aliases are client-role (CLI, embedded, ungated) and may live in both user-global and project config; `queries:` is server-role (deployment manifest only). They overlap as "name -> .gq"; `queries:` is the superset, and the end-state subsumes aliases (definition -> queries, target/branch/format -> client invocation context, positional args -> CLI sugar). v1 keeps aliases unchanged. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: make RFC-002 config global-first, project-optional The global user config is the primary, self-sufficient default; the CLI works from any directory with no project file (the kubectl/aws/gh posture), a deliberate flip from today's project-anchored behavior. The project omnigraph.yaml becomes an optional repo-scoped override and the deployment manifest. Uniform schema, both layers optional; global can hold any section including a personal server's graphs/queries. Additive: project still overrides global; the flip adds a fallback layer below the project file rather than removing it. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: justify XDG ~/.config/omnigraph over legacy ~/.omnigraph in RFC-002 Make the rationale explicit: XDG-first because OmniGraph is a client that will cache remote catalogs and keep session state alongside secrets, and XDG separates config / cache / state into distinct dirs (clear cache without touching creds; backups skip cache) whereas a single ~/.omnigraph/ mixes them. Honor ~/.omnigraph/ as a fallback for the peer-group (aws/kube/docker/helix) expectation. Add XDG_CACHE_HOME / XDG_STATE_HOME to the override precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: build RFC-002 credentials on the existing env-file mechanism OmniGraph already has credentials-by-reference: bearer_token_env names the env var, and auth.env_file is a git-ignored dotenv the CLI auto-loads (real env vars win), resolved via resolve_remote_bearer_token. The RFC's proposed credentials.yaml + token_env were redundant parallel inventions. Reconcile: reuse bearer_token_env (extend to servers.<name>) and auth.env_file (add a global ~/.config/omnigraph/.env layered under the project .env.omni); OS keychain is an additive future resolver. No new credentials.yaml. Updated summary, non-goals, background, file-naming, credentials, example, login, migration, rollout. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: use single ~/.omnigraph dir (Helix-style), not XDG, in RFC-002 Reverse the earlier XDG-first call. The prior argument rested on a false dichotomy (single-dir => mixed config/cache/state); in fact the peer tools (aws, kube, helix) achieve separation via SUBDIRECTORIES inside one ~/.tool/ dir (~/.aws/sso/cache/, ~/.kube/cache/), getting cache hygiene AND one discoverable place. So everything goes under ~/.omnigraph/: config.yaml, credentials (dotenv, 0600), cache/, state/. Lower cognitive load, matches what DB/cloud-CLI users expect, matches Helix. OMNIGRAPH_HOME overrides; $XDG_CONFIG_HOME optionally honored but ~/.omnigraph/ is canonical. Updated all paths, the rationale paragraph, the file-naming table (added a cache/state row), and env precedence. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: reconcile RFC-002 with shipped/planned CLI tickets Align with reality found in existing tickets: - Noun is graph/graphs, not target/targets (MR-603 done renamed the config key targets->graphs, flag --graph). Use graphs:/--graph; an entry is embedded (uri) XOR remote (server + remote graph name). - ~/.omnigraph/ confirmed by MR-581 (og template pull, done) which already quick-starts templates there. - Templates already exist (MR-581/MR-531) — not invented here. - The init family is already specced (init, quickstart MR-973, serve MR-970, prune MR-972, mcp install MR-974, agent-mode MR-981); this RFC only adds the user route (~/.omnigraph/config.yaml + login). - aliases: -> operations: planned (MR-839). - bearer_token_env gap tracked in MR-971. - query lint/check already exist (MR-639) — registry validator must not collide with the singular `query check`. Add a Reconciliation section; fix the canonical example to graphs:/--graph. Also: merge semantics refined (deep-merge settings, replace named entries, replace lists, config view --resolved --show-origin). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: correct stale-ticket claims and fold init/bootstrap design into RFC-002 Verify against code, not ticket statuses (MR-581 is marked done but is stale/unbuilt): no ~/.omnigraph usage, no template/serve/quickstart/ prune/login commands exist; config still uses aliases: (no operations:). So ~/.omnigraph/ stands on peer-convention merits alone, and templates are a design question, not a foothold. Add §7.5: the three-tier init model (user route = login + ~/.omnigraph/config.yaml; thin project init; fat quickstart + templates) with first-principles positions (split init/login, in-place refuse-if-exists, interactive vs --auto/agent-mode, --template flag, secrets-on-scaffold gitignore rule). This RFC owns only the user route; the rest are sibling tickets (MR-973/970/972/974/981). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: breadboard + slice Shape A in RFC-002 Add the implementation breadboard (places P1-P5, affordances N1-N14 with NEW markers, mermaid) and five vertical slices for the selected config/ CLI/init shape: V1 global layer + merge engine + config view; V2 remote graphs + HTTP-client path + credential resolution; V3 omnigraph login; V4 init-hardening + quickstart + templates (rides MR-970); V5 agent-mode (MR-981). Rollout reordered to the slice sequence; spikes X1-X4 gate their owning slice. V1-V2 close the substantive client->server gap. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add InvokeQuery Cedar action (coarse, graph-scoped) A per-graph, branch-scoped action that gates invoking a server-side stored query by name. Coarse for now: an `invoke_query` allow rule permits any stored query on the graph; a future, additive refinement adds an optional per-query-name scope without changing rules written against the coarse action. Enforcement is at the HTTP boundary; the engine `_as` writers still enforce read/change per the query body, so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). No call site yet — the invocation handler wires it in a later change (same pattern as Admin/GraphList added ahead of consumers). - variant + as_str/resource_kind(Graph)/FromStr/uses_branch_scope - Cedar schema: invoke_query appliesTo Graph - tests: per-graph allow/deny, branch-scope accepted Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Load and type-check stored queries at server boot, refusing breakage At startup the server now loads each graph's stored-query registry, type-checks every query against that graph's live schema, and refuses to boot if any query references a type/property the schema doesn't have (same posture as bad policy YAML) — so schema drift surfaces at the deploy boundary, not silently at invocation. Non-blocking warnings are logged. The validated registry is attached to the GraphHandle (the two production sites previously held `queries: None`). Loading (parse + key==symbol identity) happens at settings-build time where the config is in scope; the schema type-check happens after each engine opens (single mode in `open_single_with_queries`, multi mode in `open_single_graph`). `open_with_bearer_tokens_and_policy` delegates with an empty registry so its 18 test callers are unchanged; the public `new_*` constructors are unchanged (only the private build path threads the registry). - ServerConfigMode::Single / GraphStartupConfig carry the loaded registry - boot tests: valid registry boots; type-broken query refuses boot + names it Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Add `omnigraph queries validate` and `queries list` CLI `queries validate` type-checks the stored-query registry against the live schema offline — it opens the selected graph, runs the same check() the server runs at boot, prints breakages/warnings (human or --json), and exits non-zero on any breakage — so an operator can catch a query broken by a schema change without restarting the server. `queries list` prints each registered query's name, MCP exposure, and typed params. Named `validate` (not `check`) to avoid overlap with the existing `omnigraph lint` — `query check`/`query lint` are already deprecated argv-shims to `lint`. Registry entries resolve like the server: a named graph uses its per-graph `queries:`; otherwise the top-level one. - Queries subcommand group; reuses QueryRegistry::load + check from omnigraph-server; local-only (needs the schema), mirrors lint - tests: clean registry exits 0, broken query exits non-zero + names it, list shows the query and its typed params Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * Route registry selection through one shared query_entries_for The "which queries: block applies for graph X" rule existed twice — the server boot path and the CLI's registry_entries — and had already drifted: the CLI carried an unreachable unwrap_or_else fallback the server lacked. Add OmnigraphConfig::query_entries_for(graph: Option<&str>) as the single definition (named graph -> its per-graph block; otherwise top-level) and route all three sites through it: server single mode, server multi-graph loop, and the CLI. The CLI's dead fallback arm is deleted; CLI and server now resolve identically by construction. No behavior change. Extends the config round-trip test to pin the selector, including the unknown-name -> top-level fallback the deleted CLI arm covered. * Funnel registry validation through one validate_and_attach gate The check -> refuse-on-breakage -> log-warnings -> empty->None block was copy-pasted across both open paths (single mode and the multi-graph per-graph open), differing only by the graph label. A third opener could attach a registry that was never schema-checked. Extract validate_and_attach(queries, catalog, label) -> Option<Arc<..>> as the single gate both paths call, so attaching an unchecked registry is no longer expressible. The catalog handle is an owned Arc, so calling it before the multi-mode policy match (which rebinds db) is borrow-clean. No behavior change. Adds a direct unit test of the helper (empty / clean / breakage incl. the graph label in the message) — covering the multi-graph path's logic, which previously had no boot-refusal coverage. * Resolve param types structurally in the MCP vector lint The exposed-query advisory detected vector params with type_name.starts_with("Vector(") — a second copy of the compiler's own ScalarType::from_str_name vector parsing that could drift from it. Key the lint off PropType::from_param_type_name + ScalarType::Vector(_) instead, the one canonical resolver the type system already uses. Any future param-suppliability lint now reads the structured type rather than scanning the surface string. Behavior-preserving: the grammar forbids list-of-vector params (list_type = "[" base_type "]", and base_type excludes Vector), so the only input where the structured and string checks could differ is unparseable. Adds a guard test that an exposed String param does not false-trigger the warning. * Refuse duplicate MCP tool names across exposed stored queries The effective MCP tool name (explicit tool_name, else the query name) is a second identity namespace beside the registry key, but nothing enforced it unique — two exposed queries could claim one catalog key, and each consumer re-derived the name ad hoc. Add StoredQuery::effective_tool_name() as the one definition, and a load-time uniqueness pass in from_specs over exposed queries: a collision is a collected LoadError naming the loser and the winner. Scoped to exposed queries (unexposed have no MCP tool); deterministic over the BTreeMap so the first-declared wins and the error order is stable. New (rare) refusal: a config with colliding exposed tool names now fails `omnigraph queries validate` offline and refuses server boot, the same posture as a malformed registry. Release-note-worthy. Test-first: duplicate_exposed_tool_name_is_a_load_error (red before the pass, green after) + a CLI offline test; the unexposed sibling pins the exposed-only scope; effective_tool_name asserts folded into the load test. * docs: document the queries registry, CLI, and invoke_query action The stored-query surface shipped without user docs. Add it, per the same-PR maintenance contract: - policy.md: invoke_query as per-graph action #10 (branch-scoped), with the double-gating note; renumber graph_list; add it to the branch_scope list. - cli-reference.md: the `queries validate | list` command, and the `queries:` config block (per-graph + top-level) with mcp.expose/tool_name and the tool-name uniqueness rule. - server.md: boot-time stored-query type-check (refuse on breakage), noting invocation over HTTP/MCP is not yet exposed. * Add POST /queries/{name} stored-query invocation handler Invoke a curated server-side stored query by name: source + name come from the per-graph queries: registry, the client sends only runtime inputs (params, branch, snapshot). Gated by the invoke_query Cedar action at the boundary; the handler delegates to the existing run_query/run_mutate, whose inner Read/Change enforce still runs — so a stored mutation is double-gated (invoke_query to reach the tool, change for the write). - InvokeStoredQueryRequest + an untagged InvokeStoredQueryResponse { Read(ReadOutput), Change(ChangeOutput) } → one Json<_> return type and a oneOf 200 schema (a correct contract, not a wrong-but-simple one). - Route lives in per_graph_protected → single-mode /queries/{name} and multi-mode /graphs/{id}/queries/{name} for free. - Deny == unknown: an invoke_query denial and a missing query both return the same 404, so the catalog can't be probed by an unauthorized caller. - OpenAPI regenerated; tests cover read, mutation double-gate (403 vs 200), bad-param 400, and the identical-404 deny path. Completes the MR-969 V1 invocation slice (registry + /queries/{name} + invoke_query). * docs: stored-query invocation endpoint; flip the not-yet-exposed caveat Now that POST /queries/{name} ships (C7), document it: add the endpoint to server.md's inventory + an invocation section (body, untagged read/mutate envelope, invoke_query gate, double-gated mutations, deny == 404), and flip the startup note that said invocation was not yet exposed. In policy.md, replace "no invocation call site yet" on the invoke_query action with a pointer to the endpoint. * Scope the stored-query 404-hiding claim to non-invoke_query callers Review found the deny==404 catalog-hiding was overstated as a contract: it holds only at the outer invoke_query gate. A caller that HOLDS invoke_query but lacks read/change gets the inner gate's 403 for an existing query vs 404 for an unknown one — so existence is visible to grant-holders by design (the intended double-gate). The handler docstring, OpenAPI 404 description, and server.md all claimed the 404 was airtight against any denied actor. Correct the wording in all three (no behavior change) and add the missing symmetric test (invoke_query but no read -> 403 for an existing query, 404 for unknown) so the actual contract is pinned. Also document that in default-deny mode (tokens, no policy) every invocation 404s until an invoke_query rule is configured. Nits: the from_specs collision comment said "first declared wins" but it is lexicographically-first by name (BTreeMap); the effective_tool_name docstring overclaimed the CLI display routes through it (it resolves the rule on its own output DTO). * Default mcp.expose to true (the manifest entry is the opt-in) expose controls MCP-catalog membership only — it is not an authorization gate (invocation is gated by invoke_query regardless). So requiring a per-query mcp.expose: true was friction with no safety benefit: a non-exposed query is still HTTP-invocable by name. Flip the default so declaring a query in the manifest exposes it to the agent tool catalog by default; expose: false is the escape hatch for service-only queries. Both the absent-mcp path (Default impl) and the present-but-no-expose path (serde default fn) now yield true. Doc comments + cli-reference updated; the config round-trip test asserts the new default. * Add GET /queries stored-query catalog endpoint List a graph's mcp.expose stored queries as a typed tool catalog so a client (the MCP server) can register them as tools without fetching .gq source. Each entry carries name, MCP tool_name, description/instruction, a read/mutate flag, and decomposed typed params (kind enum: string|bool|int| bigint|float|date|datetime|blob|vector|list, plus item_kind for lists and vector_dim) — so the consumer builds an input schema with a closed match and never re-parses omnigraph type spelling. I64/U64 are bigint (string on the wire): a JSON number loses precision past 2^53 and the engine already accepts decimal strings. Read-gated (works in default-deny; the catalog is graph-wide, authorized against main). NOT Cedar-filtered per query yet — a reader can list a query whose invoke_query they lack (documented gap until per-query authz lands); invocation stays invoke_query-gated + deny==404. - api: QueriesCatalogOutput / QueryCatalogEntry / ParamDescriptor / ParamKind + query_catalog_entry (reuses PropType::from_param_type_name; scalar_kind is exhaustive, so a new ScalarType is a compile error here until catalogued). - GET /queries route in per_graph_protected (→ /graphs/{id}/queries in multi mode); OpenAPI regenerated; path allowlists updated. - Tests: projection unit (every kind, list, vector, nullable, mutation, empty) + handler (exposed-only filter, read-gate probe-oracle, empty registry). * docs: GET /queries stored-query catalog endpoint Document the catalog: the endpoint table row (GET /queries, read-gated), a catalog section (typed-param kind enum, bigint/date/datetime/blob-as-string, graph-wide/branch-independent, mcp.expose default true, the read-gated probe-oracle gap), and flip the startup note now that the catalog ships. * Collect file-I/O and parse errors in QueryRegistry::load in one pass load() early-returned on any unreadable .gq file, masking parse / identity / tool-name-collision errors in the OTHER (readable) files — so an operator fixed the missing file, restarted, and only then saw the next broken query. Now it collects I/O errors but still runs from_specs on the readable specs and returns the union, so every broken entry surfaces at once (matching the collected-errors contract the rest of the registry already follows). Safe: from_specs' tool-name collision check runs over loaded queries only, so dropping an I/O-failed entry can only under-report a collision, never invent one. I/O errors are ordered first (BTreeMap key order), then spec errors. Adds a load-level test (tempdir: a valid, a missing, and a parse-broken .gq) asserting all three surface in one Err — confirmed red before the fix. * Make invoke_query graph-scoped (one branch authority) invoke_query gates reaching the curated stored-query surface — a graph-level capability. Per-branch/snapshot access is already enforced by the inner read/change gate in run_query/run_mutate (authorized against the resolved branch), so branch-scoping the outer gate was redundant AND wrong for snapshot reads (it defaulted to main). Drop the branch dimension: remove InvokeQuery from uses_branch_scope (it joins admin as graph-scoped) and authorize the boundary gate with branch: None. Lossless: an actor confined to branch X by their read/change rules can still only invoke a stored query that touches X. A rule that sets branch_scope on invoke_query is now rejected by validate() — write invoke_query in its own rule. Ripple (atomic): restructure the server invoke fixture so invoke_query sits in its own branch_scope-free rule; invert invoke_query_is_branch_scoped -> invoke_query_rejects_branch_scope; the per-graph authorize test uses branch: None; docs (policy.md, server.md, the InvokeQuery doc). No wire/OpenAPI change. * Resolve graph config by identity, not server mode Which policy/queries block applies for a graph was decided three different, mode-dependent ways: single-mode boot used top-level even for a named graph; multi-mode used per-graph (and silently ignored a top-level queries block); the CLI used per-graph for a named target. So `queries validate --target prod` could check a different registry than the single-mode server loaded, and a named graph's per-graph policy/queries were silently shadowed. Make config a function of graph IDENTITY: a graph served by NAME (--target/server.graph, a graphs: entry) uses its own graphs.<name>.{policy, queries}; a bare URI is anonymous and uses top-level. One rule, applied by single-mode boot, multi-mode boot, and the CLI — so they can't diverge and the CLI predicts the server exactly. No silent ignore: serving a named graph while a top-level policy/queries block is populated now refuses boot, naming the block (the multi-mode top-level-policy bail, extended to queries and to single-mode-named). The CLI's `queries validate` derives the schema URI and the registry from ONE selection, and a positional URI forces anonymous (ignoring cli.graph) so the two can't come from different graphs. BREAKING (released behavior): single mode by name (--target/server.graph) with top-level policy/queries previously used top-level; it now uses the per-graph block and refuses boot if top-level is also populated. Bare-URI single mode is unchanged. Loud, with migration text pointing at graphs.<name>. - config: resolve_policy_file_for (policy sibling of query_entries_for, no top-level fallback) + populated_top_level_blocks for the coherence check. - characterization tests (single-mode named -> per-graph; named + top-level -> bail; multi-mode top-level queries -> bail; CLI positional-URI -> top-level). - docs: policy.md, server.md, cli-reference.md. * docs: RFC-002 credentials keyed by server name (keychain/profile/env) Reworks the RFC's credentials model: secrets are keyed by server name — OS keychain `omnigraph:<server>` (preferred) -> a `[<server>]` profile in `~/.omnigraph/credentials` -> `OMNIGRAPH_TOKEN[_<SERVER>]` env (CI), the AWS/gh/kube model. `servers.<name>` is endpoint-only by default but may carry an explicit, secret-free `auth: { token: { env|file|command|keychain } }` source. The shipped `bearer_token_env` + `.env.omni` dotenv remain a legacy compat path; no `credentials.yaml`. * docs: RFC-002 — typed graph locator (storage/server/graph_id), not a uri string Add §1.1: the resolved graph address is a typed GraphLocator (Embedded{storage} | Remote{server, graph_id}), not a flat uri: String. Diagnoses the string model's cost in the code today (~16 is_remote_uri forks, TargetConfig can't express multi-server x multi-graph, the CLI bails on remote, the ts SDK models baseUrl+graphId separately) and settles the YAML naming so the key names the locus: - storage: (embedded) — shipped uri: is a deprecated alias - server: + graph_id: (remote) — graph_id defaults to the entry key - storage xor server, reject both/neither (no silent ambiguity) Kills the graphs:/graph: collision and the uri:-might-be-a-server ambiguity. Updates the §1/§8 examples and the entry-shape notes to the new naming. * Test: queries list must reject an unknown --target queries list opens no graph URI, so unknown-graph validation does not ride along on resolve_target_uri the way it does for every other command. The new test reproduces the gap: with an unknown --target the command currently exits 0 and prints the (empty) top-level registry instead of erroring like the URI-resolving commands do. Fails against current code; the fix follows. * Validate the graph selection in queries list Graph-existence validation was a side effect of URI resolution: every URI-resolving command rejects an unknown --target via resolve_target_uri, but queries list opens no URI, so query_entries_for(Some(unknown)) silently fell back to the top-level registry and showed the wrong (or empty) catalog. Make membership a property of the selection: add the fallible resolve_graph_selection alongside the infallible query_entries_for (a known name passes through, an unknown name errors with the same message as resolve_target_uri, None stays anonymous), and validate the selection in execute_queries_list. query_entries_for is unchanged — server boot's bare-URI path still needs its None -> top-level arm. * Surface policy-engine errors from stored-query invoke The invoke handler mapped every authorize_request failure to 404 ('stored query not found'), which collapsed the authorization decision (deny -> 403) together with operational failures (no actor -> 401, Cedar evaluation error -> 500). A real policy-engine 500 was hidden as a missing query. Separate the two concerns instead of sniffing the masked status. Extract authorize() returning an Authz { Allowed, Denied(msg) } decision and reserve Err for operational failures only; authorize_request becomes a thin wrapper that maps Denied -> 403, so the 16 deny-as-403 callers are unchanged. The invoke handler now matches the decision directly: a denial stays 404 (deny == missing, so the catalog can't be probed without the grant), while a 401/500 propagates with its true status. 500 is now a reachable outcome on POST /queries/{name}; document it in the endpoint responses and regenerate openapi.json. * Extract the named-graph/top-level coherence rule into one helper The rule 'a named graph uses its own graphs.<name> block, so a populated top-level block is a config error' lived inline in single-mode server boot. Extract it to OmnigraphConfig::ensure_top_level_blocks_honored so the same definition can be shared by the CLI selection gate (next commit) and the two can't drift. Boot calls the helper; the message is reworded context-neutral (drops 'serving') so it reads correctly from both boot and the CLI. Behavior-preserving: multi-graph mode keeps its own unconditional check, and single_mode_named_graph_rejects_top_level_blocks still passes. * Test: queries validate/list must reject a named graph with a top-level block Server boot refuses a config where a graph is selected by name yet a top-level queries:/policy.file block is populated (the block would be silently ignored). The CLI's queries validate/list resolve the same named selection but skip that coherence check, so they give a false green / list the per-graph block. The new test reproduces it: validate prints OK and list succeeds where boot would refuse. Fails against current code; the fix follows. * Enforce top-level coherence in the single CLI selection gate queries validate validated graph membership only as a side effect of URI resolution and queries list only via resolve_graph_selection's membership check; neither applied the named-graph/top-level coherence rule server boot enforces, so both gave a false green on a config boot refuses. Fold ensure_top_level_blocks_honored into resolve_graph_selection so it is the single gate that returns only valid + server-coherent selections, and route resolve_selected_graph (queries validate) through it; queries list already calls the gate. A named graph with a populated top-level block now errors in both commands, matching boot. A positional URI stays anonymous (top-level honored), so queries_validate_positional_uri_ignores_default_graph is unaffected. * docs: RFC-003 — MCP server surface for omnigraph-server Detailed MCP-transport design for the stored-query/MCP work, building on the shipped #128 registry. Corrects the draft against the branch head: the coarse invoke_query gate + 404 denial-masking are already wired (server_invoke_query), so per-query invoke_query scope (PolicyRequest has no query-name dimension yet) is the real prerequisite; positions the doc as superseding rfc-001's MCP transport (/mcp/tools+/mcp/invoke) and reconciles the shipped mcp.expose YAML form and the schema-introspection non-goal; grounds the parity surface in the actual omnigraph-ts package (13 tools with read/change ids, 2 resources). * docs(config): clarify graph config boundaries * fix(config): enforce graph-scoped policies and query validation * fix(cli): require graph selection for scoped query registries * fix(server): preserve named graph id in single mode policy * fix(cli): share graph identity for policy resolution * test(cli): cover policy tooling server graph selection * fix(cli): honor server graph for policy tooling --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-01 22:50:31 +02:00
## 17. Decisions & rollout
**Locked:** rmcp 1.7 (official SDK); MCP target `2025-11-25`; stateless JSON over a
single `/mcp` POST (`NeverSessionManager`, `stateful_mode=false`, `json_response=true`);
`McpBackend` crate-trait seam with `&Parts` passthrough; `Builtin` enum + stored-query
populator; domain-qualified `snake_case` tool ids; annotations set explicitly; coarse
`InvokeQuery` with the double-gate; per-graph `/mcp` routing, no server-scoped MCP;
`structuredContent` + `outputSchema` (with a text mirror) for typed results;
`vector_dim: Option<u32>` handled with omit-on-absent; auth consumed as a resolved
actor, validated per-request, never passed through.
docs(rfc-003): fold external review into correct-by-design fixes An external review pass raised 8 findings; verified 7 valid (2 confirmed against the engine coercer). Folded them in as class-closing fixes rather than point patches: - §9.1 (③④, the headline): the JSON-Schema generator was a second hand-written copy of the engine's input contract — Blob (base64 vs URI string) and nullable (explicit null) were two drifts of one class. Move the projection to a single param_json_schema in omnigraph-api-types (next to ParamKind/ParamDescriptor), fix Blob -> {"type":"string","format":"uri"} (query_input.rs:449 / api-types:354 say blob-URI string) and nullable -> anyOf[..,null] (query_input.rs:273,296), and lock it to json_value_to_literal_typed with a schema/engine equivalence test so any future drift is a CI failure. - §7/§4 (①): replace the fail-open "empty allowed_origins => skip" with a total OriginPolicy and a single McpHostPolicy::from_bind constructor (remote default DenyBrowsers, enforced by origin_guard independent of rmcp's empty-list quirk). No absent-=>-skip state can be constructed. - §6/§12/§16 (②): make the non-paginated list seam a stated contract (Vec<T>, no nextCursor; meta mode bounds large catalogs) and drop the pagination claims the signature couldn't express. - §9.3 (⑦): built-in/stored tool-name collision becomes a cluster validate/boot error (fold built-in names into the registry uniqueness check), not a silent skip — per the invariants deny-list. - §9.2 (⑥): stored_query_mode folded into the one per-graph mcp: block (Phase 6), not a floating key; not configurable until that surface exists. - §10/§1 (⑧): scope derives from the per-graph mount; server-scoped `health` becomes graph-scoped `graph_health` (server liveness stays REST /healthz). - §13 (⑤, doc-only): OpenAI row corrected to the `authorization` field; Phase-1 reachability via static bearer is unchanged. §17 records the locked decisions; the validation header notes the review pass.
2026-06-16 17:34:00 +02:00
**Locked (correct-by-design fixes from the external review pass):** one shared
`param_json_schema` in `omnigraph-api-types` (Blob → URI string, nullable → `null`-union)
co-located with the coercer and pinned by a schema/engine **equivalence test** — schema
drift is a CI failure, not a shipped bug (③④); a **non-paginated list seam by contract**
`meta` mode bounds large catalogs, the seam type carries no `nextCursor` it can't honor
(②); a single fail-closed **`McpHostPolicy::from_bind`** with a total `OriginPolicy`
(no absent-⇒-skip state; remote default `DenyBrowsers` enforced by `origin_guard`) (①);
built-in/stored **name collisions rejected at `cluster validate`/boot**, never silently
skipped (⑦); `stored_query_mode` folded into the one per-graph `mcp:` block (Phase 6),
not a floating key (⑥); MCP scope **derived from the per-graph mount**, so `graph_health`
replaces a server-scoped `health` (⑧). The OpenAI row is corrected to the `authorization`
field (⑤, doc-only).
**Open / deferred:**
- **OAuth 2.1 + RFC 9728 (MR-956)** — additive Phase 2; PRM advertisement config-gated
(issue #59467).
- **Per-query `expose` / `tool_name` (cluster Phase 6, the §D5 bridge)** — the
`StoredQuery` fields exist and the projection already reads them, but cluster boot
forces `expose: true, tool_name: None` for every applied query (`settings.rs:83-84`),
so today every applied query is listed and named by its query name. Per-query
exposure/naming controls (`mcp.expose`, `tool_name`) land when the cluster catalog
grows the metadata — no projection change is then needed.
- **Per-query `invoke_query` scope (PR 0b)** — add a query-name dimension to
`PolicyRequest` + the Cedar schema so an actor can be scoped to *specific* stored
queries. Until then curation is graph-level (registry membership; `expose` once
Phase 6 lands).
- **`tools/list_changed`** — only if the registry gains runtime reload.
- **stdio → proxy collapse** — the local stdio package degrades to a stdio↔HTTP proxy
over `/mcp` once this surface is GA, leaving one tool set and one Cedar gate, the
same one-contract posture as [rfc-009-unify-access-paths.md](rfc-009-unify-access-paths.md).
**Rollout:** (1) the `omnigraph-mcp` crate + transport + a trivial backend (crate
stands alone); (2) the server backend — extension passthrough, `Builtin` enum,
read-only tools + resources, Cedar-filtered listing, the `classify` mapper; (3)
mutating tools + stored-query projection (both modes) + structured output; (4) docs +
the `omnigraph mcp install` on-ramp (MR-974); (5) OAuth/RFC-9728 (MR-956) and the
stdio proxy as separate follow-ups.