- Standardized spacing and indentation across multiple modules for improved readability.
- Reorganized `patterns` and `utils` imports for consistency.
- Updated `NyxError` and `NyxResult` related implementations to maintain consistent formatting.
- Enhanced readability in AST patterns for better clarity and maintainability.
- Introduced `NyxError` and `NyxResult` for unified error handling across modules.
- Refactored `scan.rs`, `index.rs`, and `walk.rs` with improved error management and consistent formatting.
- Replaced existing error handling in `database.rs` with `NyxResult`.
- Improved database maintenance by integrating `vacuum` and `clear` methods into workflows.
- Added `dashmap` for efficient parallel diagnostics result aggregation in `scan_with_index_parallel`.
- Enhanced readability and formatting of console outputs in multiple modules.
- Added a `vacuum` method in `database.rs` to optimize database file size and performance.
- Integrated `vacuum` calls into `scan.rs` and `index.rs` to ensure regular maintenance during operations.
- Introduced `r2d2` connection pooling for SQLite in `database.rs`.
- Updated `Indexer` to use pooled connections for improved concurrency.
- Replaced sequential processing with `rayon` for parallel file scanning.
- Added a `clear` method to `Indexer` for reindexing support.
- Enhanced database initialization with `init` and `from_pool` methods.
- Updated `Cargo.toml` and `Cargo.lock` to include `r2d2`, `r2d2_sqlite`, and new dependencies.
- Introduced `issues` table for detailed vulnerability storage.
- Enhanced `files` table with project scoping and unique constraints.
- Replaced `OutputFormat` enum with `String` for flexibility.
- Added support for formatted console output of scan results.
- Integrated file and issue updating logic for incremental scans.
- Optimized scanning by leveraging database-stored issues.
