Refactor database schema and scanning process:

- Introduced `issues` table for detailed vulnerability storage.
- Enhanced `files` table with project scoping and unique constraints.
- Replaced `OutputFormat` enum with `String` for flexibility.
- Added support for formatted console output of scan results.
- Integrated file and issue updating logic for incremental scans.
- Optimized scanning by leveraging database-stored issues.

Cargo.lock

@@ -163,6 +163,19 @@ version = "1.0.4"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "b05b61dc5112cbb17e4b6cd61790d9845d13888356391624cbe7e41efeac1e75"
 
+[[package]]
+name = "console"
+version = "0.15.11"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "054ccb5b10f9f2cbf51eb355ca1d05c2d279ce1804688d0db74b4733a5aeafd8"
+dependencies = [
+ "encode_unicode",
+ "libc",
+ "once_cell",
+ "unicode-width",
+ "windows-sys",
+]
+
 [[package]]
 name = "constant_time_eq"
 version = "0.3.1"
@@ -233,22 +246,18 @@ dependencies = [
  "windows-sys",
 ]
 
+[[package]]
+name = "encode_unicode"
+version = "1.0.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "34aa73646ffb006b8f5147f3dc182bd4bcb190227ce861fc4a4844bf8e3cb2c0"
+
 [[package]]
 name = "equivalent"
 version = "1.0.2"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "877a4ace8713b0bcf2a4e7eec82529c029f1d0619886d18145fea96c3ffe5c0f"
 
-[[package]]
-name = "errno"
-version = "0.3.12"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "cea14ef9355e3beab063703aa9dab15afd25f0667c341310c1e5274bb1d0da18"
-dependencies = [
- "libc",
- "windows-sys",
-]
-
 [[package]]
 name = "fallible-iterator"
 version = "0.3.0"
@@ -261,24 +270,6 @@ version = "0.1.9"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "7360491ce676a36bf9bb3c56c1aa791658183a54d2744120f27285738d90465a"
 
-[[package]]
-name = "fastrand"
-version = "2.3.0"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "37909eebbb50d72f9059c3b6d82c0463f2ff062c9e95845c43a6c9c0355411be"
-
-[[package]]
-name = "filetime"
-version = "0.2.25"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "35c0522e981e68cbfa8c3f978441a5f34b30b96e146b33cd3359176b50fe8586"
-dependencies = [
- "cfg-if",
- "libc",
- "libredox",
- "windows-sys",
-]
-
 [[package]]
 name = "foldhash"
 version = "0.1.5"
@@ -293,19 +284,7 @@ checksum = "335ff9f135e4384c8150d6f27c6daed433577f86b4750418338c01a1a2528592"
 dependencies = [
  "cfg-if",
  "libc",
- "wasi 0.11.1+wasi-snapshot-preview1",
-]
-
-[[package]]
-name = "getrandom"
-version = "0.3.3"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "26145e563e54f2cadc477553f1ec5ee650b00862f0a58bcd12cbdc5f0ea2d2f4"
-dependencies = [
- "cfg-if",
- "libc",
- "r-efi",
- "wasi 0.14.2+wasi-0.2.4",
+ "wasi",
 ]
 
 [[package]]
@@ -409,7 +388,6 @@ checksum = "c0ff37bd590ca25063e35af745c343cb7a0271906fb7b37e4813e8f79f00268d"
 dependencies = [
  "bitflags",
  "libc",
- "redox_syscall",
 ]
 
 [[package]]
@@ -422,12 +400,6 @@ dependencies = [
  "vcpkg",
 ]
 
-[[package]]
-name = "linux-raw-sys"
-version = "0.9.4"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "cd945864f07fe9f5371a27ad7b52a172b4b499999f1d97574c9fa68373937e12"
-
 [[package]]
 name = "log"
 version = "0.4.27"
@@ -481,15 +453,14 @@ version = "0.1.0"
 dependencies = [
  "blake3",
  "clap",
+ "console",
  "crossbeam-channel",
  "directories",
- "filetime",
  "ignore",
  "num_cpus",
  "once_cell",
  "rusqlite",
  "serde",
- "tempfile",
  "toml",
  "tracing",
  "tracing-subscriber",
@@ -565,28 +536,13 @@ dependencies = [
  "proc-macro2",
 ]
 
-[[package]]
-name = "r-efi"
-version = "5.2.0"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "74765f6d916ee2faa39bc8e68e4f3ed8949b48cccdac59983d287a7cb71ce9c5"
-
-[[package]]
-name = "redox_syscall"
-version = "0.5.13"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "0d04b7d0ee6b4a0207a0a7adb104d23ecb0b47d6beae7152d0fa34b692b29fd6"
-dependencies = [
- "bitflags",
-]
-
 [[package]]
 name = "redox_users"
 version = "0.5.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "dd6f9d3d47bdd2ad6945c5015a226ec6155d0bcdfd8f7cd29f86b71f8de99d2b"
 dependencies = [
- "getrandom 0.2.16",
+ "getrandom",
  "libredox",
  "thiserror",
 ]
@@ -649,19 +605,6 @@ dependencies = [
  "smallvec",
 ]
 
-[[package]]
-name = "rustix"
-version = "1.0.7"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "c71e83d6afe7ff64890ec6b71d6a69bb8a610ab78ce364b3352876bb4c801266"
-dependencies = [
- "bitflags",
- "errno",
- "libc",
- "linux-raw-sys",
- "windows-sys",
-]
-
 [[package]]
 name = "ryu"
 version = "1.0.20"
@@ -763,19 +706,6 @@ dependencies = [
  "unicode-ident",
 ]
 
-[[package]]
-name = "tempfile"
-version = "3.20.0"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "e8a64e3985349f2441a1a9ef0b853f869006c3855f2cda6862a94d26ebb9d6a1"
-dependencies = [
- "fastrand",
- "getrandom 0.3.3",
- "once_cell",
- "rustix",
- "windows-sys",
-]
-
 [[package]]
 name = "thiserror"
 version = "2.0.12"
@@ -1068,6 +998,12 @@ version = "1.0.18"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "5a5f39404a5da50712a4c1eecf25e90dd62b613502b7e925fd4e4d19b5c96512"
 
+[[package]]
+name = "unicode-width"
+version = "0.2.1"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "4a1a07cc7db3810833284e8d372ccdc6da29741639ecc70c9ec107df0fa6154c"
+
 [[package]]
 name = "utf8parse"
 version = "0.2.2"
@@ -1102,15 +1038,6 @@ version = "0.11.1+wasi-snapshot-preview1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "ccf3ec651a847eb01de73ccad15eb7d99f80485de043efb2f370cd654f4ea44b"
 
-[[package]]
-name = "wasi"
-version = "0.14.2+wasi-0.2.4"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "9683f9a5a998d873c0d21fcbe3c083009670149a8fab228644b8bd36b2c48cb3"
-dependencies = [
- "wit-bindgen-rt",
-]
-
 [[package]]
 name = "winapi"
 version = "0.3.9"
@@ -1223,12 +1150,3 @@ checksum = "74c7b26e3480b707944fc872477815d29a8e429d2f93a1ce000f5fa84a15cbcd"
 dependencies = [
  "memchr",
 ]
-
-[[package]]
-name = "wit-bindgen-rt"
-version = "0.39.0"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "6f42320e61fe2cfd34354ecb597f86f413484a798ba44a8ca1165c58d42da6c1"
-dependencies = [
- "bitflags",
-]