format code

This commit is contained in:
Yizhou Chi 2024-09-04 17:52:02 +08:00
parent fcd1ba66a6
commit ab8a1d6824
17 changed files with 433 additions and 396 deletions

View file

@ -1,23 +1,28 @@
import random
import math
import os
import pandas as pd
from expo.research_assistant import ResearchAssistant
from expo.insights.instruction_generator import InstructionGenerator
from expo.dataset import get_split_dataset_path, generate_task_requirement
from expo.evaluation.evaluation import evaluate_score
from expo.utils import mcts_logger, load_execute_notebook, get_exp_pool_path
from metagpt.tools.tool_recommend import BM25ToolRecommender, ToolRecommender
from metagpt.utils.common import write_json_file, read_json_file, format_trackback_info
import numpy as np
import pickle
import random
import pandas as pd
from expo.dataset import generate_task_requirement, get_split_dataset_path
from expo.evaluation.evaluation import evaluate_score
from expo.insights.instruction_generator import InstructionGenerator
from expo.research_assistant import ResearchAssistant
from expo.utils import get_exp_pool_path, load_execute_notebook, mcts_logger
from metagpt.tools.tool_recommend import ToolRecommender
from metagpt.utils.common import read_json_file
def initialize_di_root_node(task, data_config, low_is_better=False, reflection=True, name=""):
start_task_id = 2
state = create_initial_state(task, start_task_id=start_task_id, data_config=data_config, low_is_better=low_is_better, name=name)
role = ResearchAssistant(node_id="0", start_task_id=start_task_id, use_reflection=reflection, role_dir=state["node_dir"])
return role, Node(parent=None, state=state, action=None, value=0)
state = create_initial_state(
task, start_task_id=start_task_id, data_config=data_config, low_is_better=low_is_better, name=name
)
role = ResearchAssistant(
node_id="0", start_task_id=start_task_id, use_reflection=reflection, role_dir=state["node_dir"]
)
return role, Node(parent=None, state=state, action=None, value=0)
def create_initial_state(task, start_task_id, data_config, low_is_better, name):
@ -36,16 +41,16 @@ def create_initial_state(task, start_task_id, data_config, low_is_better, name):
return initial_state
class Node():
state : dict = {}
action : str = None
value : float = 0
visited : int = 0
children : list = []
normalized_reward : dict = {"train_score": 0, "dev_score": 0, "test_score": 0}
class Node:
state: dict = {}
action: str = None
value: float = 0
visited: int = 0
children: list = []
normalized_reward: dict = {"train_score": 0, "dev_score": 0, "test_score": 0}
parent = None
def __init__(self, parent=None, state = None, action=None, value = 0, max_depth=4, **kwargs):
def __init__(self, parent=None, state=None, action=None, value=0, max_depth=4, **kwargs):
self.state = state
self.action = action
self.value = value
@ -66,14 +71,14 @@ class Node():
def __hash__(self):
return hash(self.id)
def save_node(self):
os.makedirs(self.state["node_dir"], exist_ok=True)
with open(os.path.join(self.state["node_dir"], f"Node-{self.id}.pkl"), 'wb') as f:
os.makedirs(self.state["node_dir"], exist_ok=True)
with open(os.path.join(self.state["node_dir"], f"Node-{self.id}.pkl"), "wb") as f:
pickle.dump(self, f)
def load_node(self):
with open(os.path.join(self.state["node_dir"], f"Node-{self.id}.pkl"), 'rb') as f:
with open(os.path.join(self.state["node_dir"], f"Node-{self.id}.pkl"), "rb") as f:
return pickle.load(f)
def get_depth(self):
@ -94,14 +99,14 @@ class Node():
def is_terminal(self):
return int(self.state["start_task_id"]) == self.max_depth + 1
def is_fully_expanded(self):
return len(self.children) > 0
def add_child(self, child_node):
self.children.append(child_node)
def update(self, reward:dict, child_node=None):
def update(self, reward: dict, child_node=None):
if child_node is not None:
child_role = child_node.load_role()
role = self.load_role()
@ -117,46 +122,48 @@ class Node():
fname = f"Node-{self.id}.json"
role_path = os.path.join(self.state["node_dir"], fname)
return role_path
def load_role(self):
role_dict = read_json_file(self.get_role_path())
if role_dict.get('tool_recommender') is None:
role_dict['tool_recommender'] = ToolRecommender()
elif isinstance(role_dict.get('tool_recommender', {}).get('tools'), dict):
role_dict['tool_recommender']['tools'] = list(role_dict['tool_recommender']['tools'].keys())
if role_dict.get("tool_recommender") is None:
role_dict["tool_recommender"] = ToolRecommender()
elif isinstance(role_dict.get("tool_recommender", {}).get("tools"), dict):
role_dict["tool_recommender"]["tools"] = list(role_dict["tool_recommender"]["tools"].keys())
role = ResearchAssistant(**role_dict)
if self.parent is not None: # TODO: Check this
if self.parent is not None: # TODO: Check this
parent_role = self.parent.load_role()
role.update_til_start_task(parent_role, backward=False)
role.remap_tasks()
return role
def save_new_role(self, role: ResearchAssistant):
role.node_id = self.id
role.start_task_id = self.state['start_task_id']
role.start_task_id = self.state["start_task_id"]
role.state_saved = False
role.change_next_instruction(self.action)
role.change_next_instruction(self.action)
mcts_logger.log("MCTS", f"Saving new role: {role.node_id}")
role.save_state(static_save=True)
async def expand(self, max_children):
if self.is_fully_expanded():
return
insight_geneartor = InstructionGenerator()
role = self.load_role()
original_instruction = role.get_next_instruction()
insights = await insight_geneartor.generate_new_instructions(task_id=role.start_task_id + 1,
original_instruction=original_instruction,
max_num=max_children,
file_path=self.state["exp_pool_path"])
insights = await insight_geneartor.generate_new_instructions(
task_id=role.start_task_id + 1,
original_instruction=original_instruction,
max_num=max_children,
file_path=self.state["exp_pool_path"],
)
new_state = self.state.copy()
new_state['start_task_id'] += 1
new_state["start_task_id"] += 1
for insight in insights:
new_role = role.model_copy()
node = Node(parent=self, state=new_state, action=insight, value=0)
node.save_new_role(new_role)
self.add_child(node)
# def evaluate_test(self):
# prediction_fpath = os.path.join(self.state["work_dir"], self.state["task"], "predictions.csv")
# predictions = pd.read_csv(prediction_fpath)["target"]
@ -168,7 +175,7 @@ class Node():
# gt = pd.read_csv(os.path.join(split_datasets_dir["test_target"]))["target"]
# metric = self.state["dataset_config"]["metric"]
# return evaluate_score(predictions, gt, metric)
def evaluate_prediction(self, split):
pred_path = os.path.join(self.state["work_dir"], self.state["task"], f"{split}_predictions.csv")
pred_node_path = os.path.join(self.state["node_dir"], f"Node-{self.id}-{split}_predictions.csv")
@ -180,21 +187,17 @@ class Node():
# remove original predictions.csv
os.remove(pred_path)
return evaluate_score(preds, gt, metric)
def evaluate_simulation(self, score_dict):
scores = {
"dev_score": self.evaluate_prediction("dev"),
"test_score": self.evaluate_prediction("test")
}
scores = {"dev_score": self.evaluate_prediction("dev"), "test_score": self.evaluate_prediction("test")}
score_dict.update(scores)
return score_dict
async def run_node(self, role=None):
if self.is_terminal() and role is not None:
if role.state_saved:
return self.raw_reward
max_retries = 3
num_runs = 1
run_finished = False
@ -202,10 +205,10 @@ class Node():
try:
if not role:
role = self.load_role()
await load_execute_notebook(role) # execute previous notebook's code
await role.run(with_message='continue')
await load_execute_notebook(role) # execute previous notebook's code
await role.run(with_message="continue")
else:
await role.run(with_message=self.state['requirement'])
await role.run(with_message=self.state["requirement"])
run_finished = True
except Exception as e:
mcts_logger.log("MCTS", f"Error in running the role: {e}")
@ -222,18 +225,19 @@ class Node():
if score == -1:
return 0
return 1 / (1 + score)
score_dict = {k: normalize_score(v) for k, v in score_dict.items()}
self.normalized_reward = score_dict
return score_dict
class MCTS():
#data_path
root_node : Node = None
children : dict = {}
max_depth : int = 5
c_explore : float = 1.4
c_unvisited : float = 0.8
class MCTS:
# data_path
root_node: Node = None
children: dict = {}
max_depth: int = 5
c_explore: float = 1.4
c_unvisited: float = 0.8
def __init__(self, root_node, max_depth):
self.root_node = root_node
@ -243,34 +247,34 @@ class MCTS():
node = self.best_child()
mcts_logger.log("MCTS", f"Selected node id: {node.id}")
return node
def best_child(self):
def uct(node: Node):
n_visits = node.visited if node.visited else self.c_unvisited
avg_value = node.avg_value() if node.visited else node.value/self.c_unvisited
avg_value = node.avg_value() if node.visited else node.value / self.c_unvisited
return avg_value + self.c_explore * math.sqrt(math.log(node.parent.visited) / n_visits)
if len(self.children) == 0:
return self.root_node
all_children = [child for children in self.children.values() for child in children]
return max(all_children, key=uct)
async def expand(self, node : Node, max_children=5):
async def expand(self, node: Node, max_children=5):
await node.expand(max_children)
if node not in self.children or not self.children[node]:
self.children[node] = node.children
return node.children
async def simulate(self, node : Node, role=None):
async def simulate(self, node: Node, role=None):
"Returns the reward for a random simulation (to completion) of `node`"
mcts_logger.log("MCTS", f"Start simulating node {node.id}:")
while node.children:
node = random.choice(node.children)
reward = await node.run_node(role)
mcts_logger.log("MCTS", f"Simulated node's reward: {reward}")
mcts_logger.log("MCTS", f"Simulated node's reward: {reward}")
return reward
def backpropagate(self, node : Node, reward):
def backpropagate(self, node: Node, reward):
child_node = node
node.update(reward)
node = node.parent
@ -278,10 +282,11 @@ class MCTS():
node.update(reward, child_node)
node, child_node = node.parent, node
def best_path(self, root : Node):
def best_path(self, root: Node):
best_child = root
best_score = 0
def bfs(node : Node, best_score, best_child : Node, split):
def bfs(node: Node, best_score, best_child: Node, split):
assert split in ["test_score", "dev_score"]
if node not in self.children:
return best_score, best_child
@ -293,19 +298,19 @@ class MCTS():
best_child = child
best_score, best_child = bfs(child, best_score, best_child, split)
return best_score, best_child
_, best_child = bfs(root, best_score, best_child, "test_score")
_, dev_best_child = bfs(root, best_score, best_child, "dev_score")
return {"dev_best": dev_best_child,
"global_best": best_child}
return {"dev_best": dev_best_child, "global_best": best_child}
def get_num_simulations(self):
return self.root_node.visited
async def search(self, task, data_config, name,
rollouts, load_tree=False, low_is_better=False, reflection=False):
role, root = initialize_di_root_node(task, data_config, low_is_better=low_is_better, reflection=reflection, name=name)
async def search(self, task, data_config, name, rollouts, load_tree=False, low_is_better=False, reflection=False):
role, root = initialize_di_root_node(
task, data_config, low_is_better=low_is_better, reflection=reflection, name=name
)
self.root_node = root
tree_loaded = False
if load_tree:
@ -314,14 +319,14 @@ class MCTS():
mcts_logger.log("MCTS", f"Tree loaded: {tree_loaded}")
if not tree_loaded:
rollouts -= 2 # 2 rollouts for the initial tree
rollouts -= 2 # 2 rollouts for the initial tree
if rollouts < 0:
raise ValueError("Rollouts must be greater than 2 if there is no tree to load")
self.children[root] = []
reward = await self.simulate(root, role)
self.backpropagate(root, reward)
children = await self.expand(root)
#目前是随机选择1个后续可以改成多个
# 目前是随机选择1个后续可以改成多个
first_leaf = random.choice(children)
reward = await self.simulate(first_leaf)
self.backpropagate(first_leaf, reward)
@ -339,14 +344,13 @@ class MCTS():
mcts_logger.log("MCTS", f"Terminal node's reward: {reward}")
self.backpropagate(node, reward)
else:
if node.visited > 0:
if node.visited > 0:
children = await self.expand(node)
node = random.choice(children)
reward = await self.simulate(node)
self.backpropagate(node, reward)
return self.best_path(root)
def load_tree(self):
def load_children_node(node):
mcts_logger.log("MCTS", f"Load node {node.id}'s child: {node.children}")
@ -356,14 +360,15 @@ class MCTS():
child.load_node()
self.children[child] = child.children
load_children_node(child)
# Load all pkl files in the node_dir
all_pkl_files = os.listdir(self.root_node.state["node_dir"])
all_pkl_files = [f for f in all_pkl_files if f.endswith(".pkl")]
if os.path.exists(os.path.join(self.root_node.state["node_dir"], "Node-0.pkl")):
with open(os.path.join(self.root_node.state["node_dir"], "Node-0.pkl"), 'rb') as f:
with open(os.path.join(self.root_node.state["node_dir"], "Node-0.pkl"), "rb") as f:
self.root_node = pickle.load(f)
self.children[self.root_node] = self.root_node.children
load_children_node(self.root_node)
if self.children:
return True
return False
return False